Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267450 | VDD34524.1 | 71.501 | 393 | 87 | 7 | 19 | 400 | 2 | 380 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267450 | sp|Q9FI94|DHYS_ARATH | 70.483 | 393 | 70 | 6 | 19 | 400 | 2 | 359 | 0.0 | 539 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267450 | A0A396GMQ6 | 75.188 | 399 | 54 | 5 | 15 | 403 | 3 | 366 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0663920 | Msa1267450 | 0.811354 | 7.303023e-51 | -8.615850e-47 |
| Msa1131260 | Msa1267450 | 0.930740 | 1.054059e-93 | -8.615850e-47 |
| Msa1203450 | Msa1267450 | 0.951626 | 1.373977e-109 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267450 | MtrunA17_Chr8g0376541 | 75.188 | 399 | 54 | 5 | 15 | 403 | 3 | 366 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267450 | AT5G05920.1 | 70.483 | 393 | 70 | 6 | 19 | 400 | 2 | 359 | 0.0 | 539 |
| Msa1267450 | AT5G05920.2 | 69.742 | 271 | 44 | 4 | 133 | 400 | 6 | 241 | 2.41e-125 | 362 |
| Msa1267450 | AT5G05920.3 | 72.864 | 199 | 19 | 2 | 202 | 400 | 8 | 171 | 5.92e-99 | 292 |
Find 109 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGATTTGAAGACACTTTC+CGG | 0.186586 | 8_2:+72694654 | None:intergenic |
| ACTTCTAATCTTATCTCTTC+TGG | 0.201893 | 8_2:-72694336 | Msa1267450:CDS |
| GAATTTGATGGAAGTGATTC+TGG | 0.236275 | 8_2:-72691583 | Msa1267450:CDS |
| GGCTACGTGTAAAGTGTTTC+TGG | 0.243992 | 8_2:-72694364 | Msa1267450:CDS |
| GGAATCATAACTAAAATAAT+TGG | 0.276859 | 8_2:-72691769 | Msa1267450:CDS |
| TTGGCAATGCAACAGATATA+AGG | 0.280747 | 8_2:-72691750 | Msa1267450:CDS |
| GCAATGCTAACTATATTCTT+TGG | 0.283439 | 8_2:-72691124 | Msa1267450:three_prime_UTR |
| TGAAACCTCTTCATTGATAA+AGG | 0.303881 | 8_2:-72691336 | Msa1267450:exon |
| ATGAAAGCTCCTACCTTTAC+TGG | 0.310474 | 8_2:-72692216 | Msa1267450:CDS |
| ATGGGTTGAATTAGCTTGAT+TGG | 0.321932 | 8_2:-72694434 | Msa1267450:intron |
| ATCCAAGTTAATAGCTCGTT+TGG | 0.325038 | 8_2:-72692254 | Msa1267450:CDS |
| GGTTCGCTGTCAAAAGTAAA+AGG | 0.345503 | 8_2:-72691315 | Msa1267450:three_prime_UTR |
| GTTAATCCTGGACAATAAAC+TGG | 0.349470 | 8_2:+72691937 | None:intergenic |
| TCACAACTCTCAATGGCTTC+AGG | 0.353854 | 8_2:+72691177 | None:intergenic |
| CATTTGATTAACAACTTGAA+TGG | 0.354309 | 8_2:+72694543 | None:intergenic |
| ATGGTGTGTAGGTAGCAGTT+GGG | 0.354765 | 8_2:-72693206 | Msa1267450:intron |
| ACACTTTCCGGCGAGGCTTT+CGG | 0.357612 | 8_2:+72694666 | None:intergenic |
| AATACTGCACAAGAATTTGA+TGG | 0.361085 | 8_2:-72691595 | Msa1267450:CDS |
| TGCCTTGCACCAACGTATAA+AGG | 0.362855 | 8_2:-72693907 | Msa1267450:CDS |
| ATGTACAGCTTCACCATTCA+TGG | 0.365986 | 8_2:+72691726 | None:intergenic |
| ATAATCATGCCTGTCTTCAT+AGG | 0.379415 | 8_2:+72691697 | None:intergenic |
| TGACCGTCTTGTTATTCATA+AGG | 0.387636 | 8_2:-72691246 | Msa1267450:three_prime_UTR |
| CCCCATGAAACAGCCTCATC+TGG | 0.392601 | 8_2:+72691553 | None:intergenic |
| AGGATTAACCGATGGCTCAT+TGG | 0.403351 | 8_2:-72691923 | Msa1267450:CDS |
| GTTTATCAACTATTGCTGAT+TGG | 0.403658 | 8_2:-72690829 | Msa1267450:three_prime_UTR |
| CATGTTATTGTTACAACTAC+AGG | 0.408408 | 8_2:-72693955 | Msa1267450:CDS |
| ATTAAATGTCAGTGGCAAAC+TGG | 0.410835 | 8_2:+72691271 | None:intergenic |
| GCTACGTGTAAAGTGTTTCT+GGG | 0.412284 | 8_2:-72694363 | Msa1267450:CDS |
| AAAGGAGATTTCTCTTTGCC+TGG | 0.416263 | 8_2:-72693889 | Msa1267450:CDS |
| ATCCAGATGAGGCTGTTTCA+TGG | 0.429972 | 8_2:-72691555 | Msa1267450:CDS |
| TGGCAATGCAACAGATATAA+GGG | 0.431616 | 8_2:-72691749 | Msa1267450:CDS |
| CTCAAATCCATGCTCACTAC+TGG | 0.433323 | 8_2:-72694592 | Msa1267450:CDS |
| CATTCAAGTTGTTAATCAAA+TGG | 0.437638 | 8_2:-72694542 | Msa1267450:intron |
| ACATTAAGACCACGGTTGTC+AGG | 0.437997 | 8_2:+72691859 | None:intergenic |
| TCACTACAATCGTCAGTAAT+GGG | 0.439639 | 8_2:+72694396 | None:intergenic |
| GGATTAACCGATGGCTCATT+GGG | 0.439770 | 8_2:-72691922 | Msa1267450:CDS |
| CGATTGTAGTGATCGGAAAT+CGG | 0.442152 | 8_2:-72694385 | Msa1267450:CDS |
| AATATTCCAGTTTATTGTCC+AGG | 0.444941 | 8_2:-72691943 | Msa1267450:CDS |
| ACTATATTCTTTGGAACTGT+GGG | 0.456420 | 8_2:-72691115 | Msa1267450:three_prime_UTR |
| CTACCTTTACTGGGCATACA+AGG | 0.457425 | 8_2:-72692206 | Msa1267450:intron |
| TTGAATGGCTTCACCGAGGT+TGG | 0.457978 | 8_2:+72694558 | None:intergenic |
| TCAAAAGTAAAAGGTGTGGC+TGG | 0.460091 | 8_2:-72691306 | Msa1267450:three_prime_UTR |
| TGGTGTGTAGGTAGCAGTTG+GGG | 0.462666 | 8_2:-72693205 | Msa1267450:intron |
| TCCAGATGAGGCTGTTTCAT+GGG | 0.464019 | 8_2:-72691554 | Msa1267450:CDS |
| TCCAAGTTAATAGCTCGTTT+GGG | 0.467798 | 8_2:-72692253 | Msa1267450:CDS |
| CAACAATTCACAACTCTCAA+TGG | 0.471735 | 8_2:+72691170 | None:intergenic |
| AGGTATTTGTATAATGTAGT+TGG | 0.478510 | 8_2:-72693148 | Msa1267450:CDS |
| GCGTTGCAAATGTGATGTTT+CGG | 0.480473 | 8_2:+72691658 | None:intergenic |
| AACTATATTCTTTGGAACTG+TGG | 0.483607 | 8_2:-72691116 | Msa1267450:three_prime_UTR |
| GGAGCTTATCTTCGCTCAAA+AGG | 0.483770 | 8_2:-72693868 | Msa1267450:CDS |
| ATCACTACAATCGTCAGTAA+TGG | 0.493546 | 8_2:+72694395 | None:intergenic |
| TCCCAAACGAGCTATTAACT+TGG | 0.493827 | 8_2:+72692252 | None:intergenic |
| AATAATGAATTGCTTCTGAA+TGG | 0.498479 | 8_2:+72691200 | None:intergenic |
| CCTAGGTCGAATCGAAACTT+AGG | 0.510509 | 8_2:-72694806 | None:intergenic |
| CTTCCTTTGTCAGCATCACA+TGG | 0.513831 | 8_2:-72694295 | Msa1267450:intron |
| TTGCCTTGTATGCCCAGTAA+AGG | 0.514374 | 8_2:+72692203 | None:intergenic |
| AATGAGCCATCGGTTAATCC+TGG | 0.515125 | 8_2:+72691925 | None:intergenic |
| AGGATCTGCGAAAACTGTTA+AGG | 0.517573 | 8_2:-72691521 | Msa1267450:intron |
| AACGATAGCATTCCCACTGC+TGG | 0.520093 | 8_2:-72691383 | Msa1267450:CDS |
| AGGTGTGGCTGGGATCTTGA+TGG | 0.529055 | 8_2:-72691295 | Msa1267450:three_prime_UTR |
| CTCCTTTATACGTTGGTGCA+AGG | 0.531084 | 8_2:+72693905 | None:intergenic |
| TCAAAAGGATTGAATCGAAT+CGG | 0.532537 | 8_2:-72693853 | Msa1267450:intron |
| GCAGTAAAGAGTAAAATGAA+TGG | 0.534821 | 8_2:+72691813 | None:intergenic |
| GTGAATTGTTGATATAATTG+TGG | 0.545985 | 8_2:-72691158 | Msa1267450:three_prime_UTR |
| GGTGTGTAGGTAGCAGTTGG+GGG | 0.547794 | 8_2:-72693204 | Msa1267450:intron |
| GCGAACCTTTATCAATGAAG+AGG | 0.556685 | 8_2:+72691331 | None:intergenic |
| CATGCAGATCCTATGAAGAC+AGG | 0.558786 | 8_2:-72691706 | Msa1267450:CDS |
| TATGGTGTGTAGGTAGCAGT+TGG | 0.561177 | 8_2:-72693207 | Msa1267450:intron |
| TGCAAATGTGATGTTTCGGA+AGG | 0.562235 | 8_2:+72691662 | None:intergenic |
| TTTGAGCGAAGATAAGCTCC+AGG | 0.562914 | 8_2:+72693871 | None:intergenic |
| GTGTGTAGGTAGCAGTTGGG+GGG | 0.563035 | 8_2:-72693203 | Msa1267450:intron |
| CAAAAGTAAAAGGTGTGGCT+GGG | 0.565525 | 8_2:-72691305 | Msa1267450:three_prime_UTR |
| GAGAAATCTCCTTTATACGT+TGG | 0.568029 | 8_2:+72693898 | None:intergenic |
| TTTCATTCCTTCCACAACAC+TGG | 0.571917 | 8_2:-72691886 | Msa1267450:CDS |
| AAACGAGCTATTAACTTGGA+TGG | 0.573229 | 8_2:+72692256 | None:intergenic |
| ACAGATATAAGGGCCATGAA+TGG | 0.578881 | 8_2:-72691739 | Msa1267450:CDS |
| CCAGATGAGGCTGTTTCATG+GGG | 0.578985 | 8_2:-72691553 | Msa1267450:CDS |
| CTTGTATGCCCAGTAAAGGT+AGG | 0.581698 | 8_2:+72692207 | None:intergenic |
| AATGTTTCAGCAACCAGCAG+TGG | 0.585353 | 8_2:+72691370 | None:intergenic |
| TGTCAGGACTGCCAGTGTTG+TGG | 0.586668 | 8_2:+72691875 | None:intergenic |
| GGTTGAATTAGCTTGATTGG+AGG | 0.590957 | 8_2:-72694431 | Msa1267450:intron |
| TATTGTCCAGGATTAACCGA+TGG | 0.595026 | 8_2:-72691931 | Msa1267450:CDS |
| TGACAACCGTGGTCTTAATG+TGG | 0.596650 | 8_2:-72691857 | Msa1267450:CDS |
| ACAGTCGACAAAAGCAGAGT+CGG | 0.598115 | 8_2:+72694753 | None:intergenic |
| CGGAAAGTGTCTTCAAATCG+AGG | 0.609261 | 8_2:-72694653 | Msa1267450:CDS |
| CTTAATGTGGACATAGTGCA+AGG | 0.610797 | 8_2:-72691844 | Msa1267450:CDS |
| TGAAAGCTCCTACCTTTACT+GGG | 0.613009 | 8_2:-72692215 | Msa1267450:CDS |
| TTCTGGAGCTCATCCAGATG+AGG | 0.617682 | 8_2:-72691566 | Msa1267450:CDS |
| CGGTCAAAATTAAATGTCAG+TGG | 0.618761 | 8_2:+72691263 | None:intergenic |
| AACGCCAACATGATGCGTAA+TGG | 0.620030 | 8_2:-72691640 | Msa1267450:CDS |
| CATGTCACCCAATGAGCCAT+CGG | 0.626979 | 8_2:+72691915 | None:intergenic |
| ATGTTTCAGCAACCAGCAGT+GGG | 0.629148 | 8_2:+72691371 | None:intergenic |
| TTGAAAACCAGTAGTGAGCA+TGG | 0.634888 | 8_2:+72694585 | None:intergenic |
| TGCACCATTACGCATCATGT+TGG | 0.635711 | 8_2:+72691636 | None:intergenic |
| TTACTGACGATTGTAGTGAT+CGG | 0.636960 | 8_2:-72694392 | Msa1267450:CDS |
| GGAAAGTGTCTTCAAATCGA+GGG | 0.644614 | 8_2:-72694652 | Msa1267450:CDS |
| AAAATGATGATGCAGAAGAG+AGG | 0.644919 | 8_2:-72693168 | Msa1267450:CDS |
| TTTGAAGACACTTTCCGGCG+AGG | 0.658661 | 8_2:+72694659 | None:intergenic |
| AGGACTGCCAGTGTTGTGGA+AGG | 0.670043 | 8_2:+72691879 | None:intergenic |
| TCACCATGTGATGCTGACAA+AGG | 0.671310 | 8_2:+72694292 | None:intergenic |
| GAGGGTTATGATTTCAACCG+CGG | 0.671769 | 8_2:-72694634 | Msa1267450:CDS |
| GTTATTGTTACAACTACAGG+TGG | 0.672134 | 8_2:-72693952 | Msa1267450:CDS |
| GCTGTCAAAAGTAAAAGGTG+TGG | 0.689064 | 8_2:-72691310 | Msa1267450:three_prime_UTR |
| GGACCTTATGAATAACAAGA+CGG | 0.697207 | 8_2:+72691243 | None:intergenic |
| CTATGTCCACATTAAGACCA+CGG | 0.698384 | 8_2:+72691851 | None:intergenic |
| ACTGGCAGTCCTGACAACCG+TGG | 0.720073 | 8_2:-72691868 | Msa1267450:CDS |
| GCTGTTGATAATCGACGCCG+CGG | 0.724424 | 8_2:+72694617 | None:intergenic |
| CAACTTGAATGGCTTCACCG+AGG | 0.725512 | 8_2:+72694554 | None:intergenic |
| CAGATGAGGCTGTTTCATGG+GGG | 0.740121 | 8_2:-72691552 | Msa1267450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAATTATAATTTT+GGG | - | chr8_2:72692844-72692863 | Msa1267450:intron | 0.0% |
| !! | TATTATAAATTAACATTTCA+AGG | + | chr8_2:72692146-72692165 | None:intergenic | 10.0% |
| !!! | ACATTTTTAGTTTATTATTT+TGG | - | chr8_2:72692885-72692904 | Msa1267450:intron | 10.0% |
| !!! | CATTTTTAGTTTATTATTTT+GGG | - | chr8_2:72692886-72692905 | Msa1267450:intron | 10.0% |
| !!! | ATAATCTTATTGATATTTTT+TGG | - | chr8_2:72693644-72693663 | Msa1267450:intron | 10.0% |
| !! | AATATATATGATCTAATCAA+AGG | + | chr8_2:72691519-72691538 | None:intergenic | 15.0% |
| !! | AACAATATTAAAAAACCATT+TGG | + | chr8_2:72691614-72691633 | None:intergenic | 15.0% |
| !! | TTCAACATTTGATTAAAAAT+AGG | + | chr8_2:72691848-72691867 | None:intergenic | 15.0% |
| !!! | TATTTTTAATCAAATGTTGA+AGG | - | chr8_2:72691847-72691866 | Msa1267450:CDS | 15.0% |
| !! | TAAAATCTATTTCCAATAAA+AGG | + | chr8_2:72692830-72692849 | None:intergenic | 15.0% |
| !! | ATATTATGTTTAATTACTAC+CGG | - | chr8_2:72692940-72692959 | Msa1267450:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr8_2:72694669-72694688 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr8_2:72694670-72694689 | None:intergenic | 15.0% |
| !! | ATTTGCAATAATTGTCATTA+GGG | + | chr8_2:72691808-72691827 | None:intergenic | 20.0% |
| !! | AATTTGCAATAATTGTCATT+AGG | + | chr8_2:72691809-72691828 | None:intergenic | 20.0% |
| !! | TACAAAAGAAAGGTTTAAAA+AGG | + | chr8_2:72692018-72692037 | None:intergenic | 20.0% |
| !!! | AAGAAAAGTTTTAACATTTG+TGG | + | chr8_2:72692111-72692130 | None:intergenic | 20.0% |
| !! | CAAAATTTATTACTGAAATC+TGG | + | chr8_2:72692739-72692758 | None:intergenic | 20.0% |
| !! | TATTCTTCATTTCTGTTAAA+GGG | + | chr8_2:72692767-72692786 | None:intergenic | 20.0% |
| !!! | GTTTATTATTTTGGGTTTAA+TGG | - | chr8_2:72692894-72692913 | Msa1267450:intron | 20.0% |
| !!! | TTATATTTTACCTCTGATTA+AGG | - | chr8_2:72693263-72693282 | Msa1267450:intron | 20.0% |
| !!! | TCTTATTTACTCAATAACTT+CGG | - | chr8_2:72693600-72693619 | Msa1267450:intron | 20.0% |
| !! | GGAATCATAACTAAAATAAT+TGG | - | chr8_2:72693854-72693873 | Msa1267450:CDS | 20.0% |
| !!! | ATAAAAGGACATAGTTTTAA+GGG | + | chr8_2:72694193-72694212 | None:intergenic | 20.0% |
| !!! | AATAAAAGGACATAGTTTTA+AGG | + | chr8_2:72694194-72694213 | None:intergenic | 20.0% |
| !!! | GTAAAAAAATGCTTTTTATG+TGG | + | chr8_2:72694404-72694423 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr8_2:72694600-72694619 | None:intergenic | 20.0% |
| ! | CATTTGATTAACAACTTGAA+TGG | + | chr8_2:72691083-72691102 | None:intergenic | 25.0% |
| !!! | CATTCAAGTTGTTAATCAAA+TGG | - | chr8_2:72691081-72691100 | Msa1267450:three_prime_UTR | 25.0% |
| !! | GCTTATAAAGTTTTTGTCTT+TGG | - | chr8_2:72691163-72691182 | Msa1267450:three_prime_UTR | 25.0% |
| !!! | TCATAATAACTTCTAGCTTA+TGG | + | chr8_2:72691412-72691431 | None:intergenic | 25.0% |
| ! | AAGCTAGAAGTTATTATGAA+AGG | - | chr8_2:72691413-72691432 | Msa1267450:intron | 25.0% |
| ! | TAATCAAAGGAAATTGCAAT+AGG | + | chr8_2:72691506-72691525 | None:intergenic | 25.0% |
| ! | TCATATATATTCAAAGATCC+TGG | - | chr8_2:72691528-72691547 | Msa1267450:CDS | 25.0% |
| !!! | ACTACATAAGTTTTGTAATG+CGG | + | chr8_2:72691918-72691937 | None:intergenic | 25.0% |
| ! | TTTGTCAAGGTAATCTAAAT+CGG | - | chr8_2:72691944-72691963 | Msa1267450:CDS | 25.0% |
| !! | CCAATAAATTCAGATTTTCA+AGG | + | chr8_2:72692048-72692067 | None:intergenic | 25.0% |
| ! | CCTTGAAAATCTGAATTTAT+TGG | - | chr8_2:72692045-72692064 | Msa1267450:intron | 25.0% |
| ! | AGATCTAATAATACATCTGT+AGG | - | chr8_2:72692274-72692293 | Msa1267450:CDS | 25.0% |
| ! | TAATAATACATCTGTAGGAA+TGG | - | chr8_2:72692279-72692298 | Msa1267450:intron | 25.0% |
| ! | AGGTATTTGTATAATGTAGT+TGG | - | chr8_2:72692475-72692494 | Msa1267450:intron | 25.0% |
| ! | CTATTCTTCATTTCTGTTAA+AGG | + | chr8_2:72692768-72692787 | None:intergenic | 25.0% |
| !! | AATCATTTCGTTCCTTTTAT+TGG | - | chr8_2:72692815-72692834 | Msa1267450:intron | 25.0% |
| ! | CCAAAGTAATTAAAATCAAC+TGG | + | chr8_2:72693150-72693169 | None:intergenic | 25.0% |
| !!! | CCAGTTGATTTTAATTACTT+TGG | - | chr8_2:72693147-72693166 | Msa1267450:CDS | 25.0% |
| ! | TTAGAATACATATATTCTGC+TGG | - | chr8_2:72693216-72693235 | Msa1267450:intron | 25.0% |
| !!! | ATGGATGATTTTGAAACAAT+TGG | - | chr8_2:72693833-72693852 | Msa1267450:intron | 25.0% |
| !!! | TAGTTTTAAGGGATATAGTA+CGG | + | chr8_2:72694182-72694201 | None:intergenic | 25.0% |
| ! | AATAATGAATTGCTTCTGAA+TGG | + | chr8_2:72694426-72694445 | None:intergenic | 25.0% |
| ! | GTGAATTGTTGATATAATTG+TGG | - | chr8_2:72694465-72694484 | Msa1267450:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr8_2:72694601-72694620 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr8_2:72694622-72694641 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr8_2:72694623-72694642 | None:intergenic | 25.0% |
| !! | TTTTGTCGACTGTGAAAAAA+AGG | - | chr8_2:72690880-72690899 | Msa1267450:intron | 30.0% |
| !!! | AAGTTTTTGTCTTTGGAACA+TGG | - | chr8_2:72691170-72691189 | Msa1267450:three_prime_UTR | 30.0% |
| !!! | AGTTTTTGTCTTTGGAACAT+GGG | - | chr8_2:72691171-72691190 | Msa1267450:three_prime_UTR | 30.0% |
| ACTTCTAATCTTATCTCTTC+TGG | - | chr8_2:72691287-72691306 | Msa1267450:three_prime_UTR | 30.0% | |
| TGATTGATTAATTGCCAATG+AGG | + | chr8_2:72691455-72691474 | None:intergenic | 30.0% | |
| TATATATTCAAAGATCCTGG+TGG | - | chr8_2:72691531-72691550 | Msa1267450:CDS | 30.0% | |
| CTTTATATATTAAAGCCACC+AGG | + | chr8_2:72691549-72691568 | None:intergenic | 30.0% | |
| !! | TGAAAACTTGCTAAACCAAA+TGG | - | chr8_2:72691596-72691615 | Msa1267450:CDS | 30.0% |
| CATGTTATTGTTACAACTAC+AGG | - | chr8_2:72691668-72691687 | Msa1267450:CDS | 30.0% | |
| TCAAAAGGATTGAATCGAAT+CGG | - | chr8_2:72691770-72691789 | Msa1267450:CDS | 30.0% | |
| GAATCGAATCGGTAATTTAT+TGG | - | chr8_2:72691781-72691800 | Msa1267450:CDS | 30.0% | |
| TGACAATTATTGCAAATTCC+AGG | - | chr8_2:72691811-72691830 | Msa1267450:CDS | 30.0% | |
| !! | CTACATAAGTTTTGTAATGC+GGG | + | chr8_2:72691917-72691936 | None:intergenic | 30.0% |
| ! | ATGTAGTTCAGTTTTTGTCA+AGG | - | chr8_2:72691931-72691950 | Msa1267450:CDS | 30.0% |
| CATTGTATAAAAGAGAGAAC+TGG | + | chr8_2:72692238-72692257 | None:intergenic | 30.0% | |
| !! | CTTAATAAGCATGTTTTGAG+TGG | - | chr8_2:72692335-72692354 | Msa1267450:intron | 30.0% |
| AGTTTACACCTGCTATATAT+TGG | - | chr8_2:72692538-72692557 | Msa1267450:intron | 30.0% | |
| ATTATGTTCTTGTTGAGTCA+TGG | - | chr8_2:72692585-72692604 | Msa1267450:intron | 30.0% | |
| GAGTCATGGTTTCTAATAAT+TGG | - | chr8_2:72692599-72692618 | Msa1267450:intron | 30.0% | |
| GATATTACGTTTGATTGTTC+TGG | - | chr8_2:72692626-72692645 | Msa1267450:intron | 30.0% | |
| CACAAATACATAATATCCCA+AGG | + | chr8_2:72692684-72692703 | None:intergenic | 30.0% | |
| GGGATATTATGTATTTGTGA+TGG | - | chr8_2:72692685-72692704 | Msa1267450:intron | 30.0% | |
| AAAATGCCAATATGTTACGT+CGG | + | chr8_2:72693124-72693143 | None:intergenic | 30.0% | |
| AATATAATCTCCTTCATCAG+AGG | + | chr8_2:72693250-72693269 | None:intergenic | 30.0% | |
| ! | TATTTTACCTCTGATTAAGG+AGG | - | chr8_2:72693266-72693285 | Msa1267450:intron | 30.0% |
| AGGAAACTACAGTATAACAA+TGG | + | chr8_2:72693529-72693548 | None:intergenic | 30.0% | |
| GTTACATACAAAATGCAACA+TGG | - | chr8_2:72693561-72693580 | Msa1267450:intron | 30.0% | |
| AATATTCCAGTTTATTGTCC+AGG | - | chr8_2:72693680-72693699 | Msa1267450:intron | 30.0% | |
| GCAGTAAAGAGTAAAATGAA+TGG | + | chr8_2:72693813-72693832 | None:intergenic | 30.0% | |
| ! | TCATTTTACTCTTTACTGCA+TGG | - | chr8_2:72693814-72693833 | Msa1267450:intron | 30.0% |
| ! | AAGACAGGCATGATTATTTT+AGG | - | chr8_2:72693932-72693951 | Msa1267450:CDS | 30.0% |
| AATACTGCACAAGAATTTGA+TGG | - | chr8_2:72694028-72694047 | Msa1267450:intron | 30.0% | |
| ! | AACAAGTAGCGAAAGTATAT+AGG | + | chr8_2:72694133-72694152 | None:intergenic | 30.0% |
| !! | TCCTTTTATTTCACTAAACC+AGG | - | chr8_2:72694204-72694223 | Msa1267450:intron | 30.0% |
| ACCTGGTTTAGTGAAATAAA+AGG | + | chr8_2:72694208-72694227 | None:intergenic | 30.0% | |
| TGAAACCTCTTCATTGATAA+AGG | - | chr8_2:72694287-72694306 | Msa1267450:intron | 30.0% | |
| GCAATGCTAACTATATTCTT+TGG | - | chr8_2:72694499-72694518 | Msa1267450:intron | 30.0% | |
| !! | AACTATATTCTTTGGAACTG+TGG | - | chr8_2:72694507-72694526 | Msa1267450:intron | 30.0% |
| !! | ACTATATTCTTTGGAACTGT+GGG | - | chr8_2:72694508-72694527 | Msa1267450:intron | 30.0% |
| !!! | TTAGTTTTGAGGTGTTGAAA+AGG | - | chr8_2:72694536-72694555 | Msa1267450:intron | 30.0% |
| TCTGTGTGAAAAAACAAAGT+AGG | - | chr8_2:72694700-72694719 | Msa1267450:CDS | 30.0% | |
| ACAAAGTAGGTCAATTATAC+CGG | - | chr8_2:72694713-72694732 | Msa1267450:CDS | 30.0% | |
| GTTTATCAACTATTGCTGAT+TGG | - | chr8_2:72694794-72694813 | Msa1267450:five_prime_UTR | 30.0% | |
| !!! | TTCGGATTTTTTGAAGACTG+TGG | + | chr8_2:72690942-72690961 | None:intergenic | 35.0% |
| ! | ATGGGTTGAATTAGCTTGAT+TGG | - | chr8_2:72691189-72691208 | Msa1267450:three_prime_UTR | 35.0% |
| TCACTACAATCGTCAGTAAT+GGG | + | chr8_2:72691230-72691249 | None:intergenic | 35.0% | |
| ATCACTACAATCGTCAGTAA+TGG | + | chr8_2:72691231-72691250 | None:intergenic | 35.0% | |
| TTACTGACGATTGTAGTGAT+CGG | - | chr8_2:72691231-72691250 | Msa1267450:three_prime_UTR | 35.0% | |
| AATGAGGAAGTCATTGTCTA+TGG | + | chr8_2:72691439-72691458 | None:intergenic | 35.0% | |
| ATAGACAATGACTTCCTCAT+TGG | - | chr8_2:72691438-72691457 | Msa1267450:intron | 35.0% | |
| CCTGTAGAATAACATGAGTA+CGG | + | chr8_2:72691646-72691665 | None:intergenic | 35.0% | |
| GTTATTGTTACAACTACAGG+TGG | - | chr8_2:72691671-72691690 | Msa1267450:CDS | 35.0% | |
| GAGAAATCTCCTTTATACGT+TGG | + | chr8_2:72691728-72691747 | None:intergenic | 35.0% | |
| ATTATTGCAAATTCCAGGAC+TGG | - | chr8_2:72691816-72691835 | Msa1267450:CDS | 35.0% | |
| AAATAGGAATAATCCAGTCC+TGG | + | chr8_2:72691832-72691851 | None:intergenic | 35.0% | |
| TCAAGGTAATCTAAATCGGA+TGG | - | chr8_2:72691948-72691967 | Msa1267450:CDS | 35.0% | |
| AGGTGAGTGATACAAAAGAA+AGG | + | chr8_2:72692028-72692047 | None:intergenic | 35.0% | |
| TAAAGTTCCACGTTGCTTAA+AGG | + | chr8_2:72692191-72692210 | None:intergenic | 35.0% | |
| TGTAGGAATGGAAATACTGA+CGG | - | chr8_2:72692291-72692310 | Msa1267450:intron | 35.0% | |
| !! | ATGTTTTGAGTGGCAATAGT+AGG | - | chr8_2:72692345-72692364 | Msa1267450:intron | 35.0% |
| TTGATTCCGATGATACTAGT+AGG | - | chr8_2:72692385-72692404 | Msa1267450:intron | 35.0% | |
| TTCCTTCCTACTAGTATCAT+CGG | + | chr8_2:72692394-72692413 | None:intergenic | 35.0% | |
| TACTAGTAGGAAGGAATGTA+TGG | - | chr8_2:72692398-72692417 | Msa1267450:intron | 35.0% | |
| ! | AAAATGATGATGCAGAAGAG+AGG | - | chr8_2:72692455-72692474 | Msa1267450:intron | 35.0% |
| ! | TAAGTGGTGCATGTTTGTTA+AGG | - | chr8_2:72692512-72692531 | Msa1267450:intron | 35.0% |
| TACACCTGCTATATATTGGT+AGG | - | chr8_2:72692542-72692561 | Msa1267450:intron | 35.0% | |
| ACACCTGCTATATATTGGTA+GGG | - | chr8_2:72692543-72692562 | Msa1267450:intron | 35.0% | |
| CTGAAATCTGGATGCATATA+GGG | + | chr8_2:72692727-72692746 | None:intergenic | 35.0% | |
| ACTGAAATCTGGATGCATAT+AGG | + | chr8_2:72692728-72692747 | None:intergenic | 35.0% | |
| TCAAGGTTTAATGGTTAGAC+CGG | + | chr8_2:72692973-72692992 | None:intergenic | 35.0% | |
| TCTAACCATTAAACCTTGAC+TGG | - | chr8_2:72692974-72692993 | Msa1267450:intron | 35.0% | |
| ATTCTCCAGTCAAGGTTTAA+TGG | + | chr8_2:72692982-72693001 | None:intergenic | 35.0% | |
| AATCAAACCAGACATTGAAC+CGG | + | chr8_2:72693008-72693027 | None:intergenic | 35.0% | |
| GACGAAATGACAATAGCTAT+TGG | - | chr8_2:72693047-72693066 | Msa1267450:intron | 35.0% | |
| AAAAGAACCTCCTTAATCAG+AGG | + | chr8_2:72693276-72693295 | None:intergenic | 35.0% | |
| !!! | CATCTTCCTTTTTTGACAGA+AGG | - | chr8_2:72693333-72693352 | Msa1267450:intron | 35.0% |
| ! | AAACGAGCTATTAACTTGGA+TGG | + | chr8_2:72693370-72693389 | None:intergenic | 35.0% |
| ATCCAAGTTAATAGCTCGTT+TGG | - | chr8_2:72693369-72693388 | Msa1267450:intron | 35.0% | |
| TCCAAGTTAATAGCTCGTTT+GGG | - | chr8_2:72693370-72693389 | Msa1267450:intron | 35.0% | |
| ! | TGCATTTTGTATGTAACTGC+AGG | + | chr8_2:72693558-72693577 | None:intergenic | 35.0% |
| GTTAATCCTGGACAATAAAC+TGG | + | chr8_2:72693689-72693708 | None:intergenic | 35.0% | |
| TTGGCAATGCAACAGATATA+AGG | - | chr8_2:72693873-72693892 | Msa1267450:CDS | 35.0% | |
| TGGCAATGCAACAGATATAA+GGG | - | chr8_2:72693874-72693893 | Msa1267450:CDS | 35.0% | |
| ATAATCATGCCTGTCTTCAT+AGG | + | chr8_2:72693929-72693948 | None:intergenic | 35.0% | |
| !!! | ACAGGCATGATTATTTTAGG+AGG | - | chr8_2:72693935-72693954 | Msa1267450:CDS | 35.0% |
| GAATTTGATGGAAGTGATTC+TGG | - | chr8_2:72694040-72694059 | Msa1267450:intron | 35.0% | |
| ATTAAATGTCAGTGGCAAAC+TGG | + | chr8_2:72694355-72694374 | None:intergenic | 35.0% | |
| CGGTCAAAATTAAATGTCAG+TGG | + | chr8_2:72694363-72694382 | None:intergenic | 35.0% | |
| !! | TGACCGTCTTGTTATTCATA+AGG | - | chr8_2:72694377-72694396 | Msa1267450:CDS | 35.0% |
| GGACCTTATGAATAACAAGA+CGG | + | chr8_2:72694383-72694402 | None:intergenic | 35.0% | |
| CAACAATTCACAACTCTCAA+TGG | + | chr8_2:72694456-72694475 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr8_2:72694587-72694606 | None:intergenic | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | chr8_2:72694714-72694733 | Msa1267450:CDS | 35.0% | |
| ! | CTCGATTTGAAGACACTTTC+CGG | + | chr8_2:72690972-72690991 | None:intergenic | 40.0% |
| !! | GGAAAGTGTCTTCAAATCGA+GGG | - | chr8_2:72690971-72690990 | Msa1267450:intron | 40.0% |
| TTGAAAACCAGTAGTGAGCA+TGG | + | chr8_2:72691041-72691060 | None:intergenic | 40.0% | |
| ! | GGTTGAATTAGCTTGATTGG+AGG | - | chr8_2:72691192-72691211 | Msa1267450:three_prime_UTR | 40.0% |
| CGATTGTAGTGATCGGAAAT+CGG | - | chr8_2:72691238-72691257 | Msa1267450:three_prime_UTR | 40.0% | |
| ! | GCTACGTGTAAAGTGTTTCT+GGG | - | chr8_2:72691260-72691279 | Msa1267450:three_prime_UTR | 40.0% |
| CCGTACTCATGTTATTCTAC+AGG | - | chr8_2:72691643-72691662 | Msa1267450:CDS | 40.0% | |
| AAAGGAGATTTCTCTTTGCC+TGG | - | chr8_2:72691734-72691753 | Msa1267450:CDS | 40.0% | |
| GTTGAAGGAACAAACTCATG+AGG | - | chr8_2:72691862-72691881 | Msa1267450:CDS | 40.0% | |
| TCTAAATCGGATGGTTTGAC+TGG | - | chr8_2:72691957-72691976 | Msa1267450:intron | 40.0% | |
| CTAAATCGGATGGTTTGACT+GGG | - | chr8_2:72691958-72691977 | Msa1267450:intron | 40.0% | |
| GTTTAAAAAGGTCTGACCCT+CGG | + | chr8_2:72692006-72692025 | None:intergenic | 40.0% | |
| GTTATCTCCTTTAAGCAACG+TGG | - | chr8_2:72692181-72692200 | Msa1267450:intron | 40.0% | |
| ATGGAAATACTGACGGAGAA+AGG | - | chr8_2:72692298-72692317 | Msa1267450:intron | 40.0% | |
| TTCCGATGATACTAGTAGGA+AGG | - | chr8_2:72692389-72692408 | Msa1267450:intron | 40.0% | |
| GGCATTTGTTCTGATGTAAG+TGG | - | chr8_2:72692496-72692515 | Msa1267450:intron | 40.0% | |
| !! | CCATGTGATTTTAGTGCCTT+GGG | - | chr8_2:72692665-72692684 | Msa1267450:intron | 40.0% |
| !! | AATTACTACCGGTTCAACTC+CGG | - | chr8_2:72692951-72692970 | Msa1267450:intron | 40.0% |
| GAAACTCACATACACAAGTG+AGG | - | chr8_2:72693069-72693088 | Msa1267450:intron | 40.0% | |
| ACATACACAAGTGAGGAACT+GGG | - | chr8_2:72693076-72693095 | Msa1267450:intron | 40.0% | |
| !!! | CTTTGGTTTTTGTCAATGCC+TGG | - | chr8_2:72693164-72693183 | Msa1267450:CDS | 40.0% |
| GGATAAAGAACCTCTGATGA+AGG | - | chr8_2:72693237-72693256 | Msa1267450:intron | 40.0% | |
| ACTGCACCTTCTGTCAAAAA+AGG | + | chr8_2:72693342-72693361 | None:intergenic | 40.0% | |
| !!! | TTTTTTGACAGAAGGTGCAG+TGG | - | chr8_2:72693341-72693360 | Msa1267450:intron | 40.0% |
| TCCCAAACGAGCTATTAACT+TGG | + | chr8_2:72693374-72693393 | None:intergenic | 40.0% | |
| ATGAAAGCTCCTACCTTTAC+TGG | - | chr8_2:72693407-72693426 | Msa1267450:intron | 40.0% | |
| TGAAAGCTCCTACCTTTACT+GGG | - | chr8_2:72693408-72693427 | Msa1267450:intron | 40.0% | |
| TATGTAACTGCAGGACATCA+AGG | + | chr8_2:72693549-72693568 | None:intergenic | 40.0% | |
| TATTGTCCAGGATTAACCGA+TGG | - | chr8_2:72693692-72693711 | Msa1267450:intron | 40.0% | |
| TTTCATTCCTTCCACAACAC+TGG | - | chr8_2:72693737-72693756 | Msa1267450:intron | 40.0% | |
| CTATGTCCACATTAAGACCA+CGG | + | chr8_2:72693775-72693794 | None:intergenic | 40.0% | |
| CTTAATGTGGACATAGTGCA+AGG | - | chr8_2:72693779-72693798 | Msa1267450:intron | 40.0% | |
| ACAGATATAAGGGCCATGAA+TGG | - | chr8_2:72693884-72693903 | Msa1267450:CDS | 40.0% | |
| ATGTACAGCTTCACCATTCA+TGG | + | chr8_2:72693900-72693919 | None:intergenic | 40.0% | |
| !!! | GGCATGATTATTTTAGGAGG+TGG | - | chr8_2:72693938-72693957 | Msa1267450:CDS | 40.0% |
| TGCAAATGTGATGTTTCGGA+AGG | + | chr8_2:72693964-72693983 | None:intergenic | 40.0% | |
| GCGTTGCAAATGTGATGTTT+CGG | + | chr8_2:72693968-72693987 | None:intergenic | 40.0% | |
| AGGATCTGCGAAAACTGTTA+AGG | - | chr8_2:72694102-72694121 | Msa1267450:intron | 40.0% | |
| GCGAACCTTTATCAATGAAG+AGG | + | chr8_2:72694295-72694314 | None:intergenic | 40.0% | |
| GGTTCGCTGTCAAAAGTAAA+AGG | - | chr8_2:72694308-72694327 | Msa1267450:CDS | 40.0% | |
| GCTGTCAAAAGTAAAAGGTG+TGG | - | chr8_2:72694313-72694332 | Msa1267450:CDS | 40.0% | |
| ! | TCAAAAGTAAAAGGTGTGGC+TGG | - | chr8_2:72694317-72694336 | Msa1267450:CDS | 40.0% |
| ! | CAAAAGTAAAAGGTGTGGCT+GGG | - | chr8_2:72694318-72694337 | Msa1267450:CDS | 40.0% |
| !!! | TGTGGGTTCTCTTAGTTTTG+AGG | - | chr8_2:72694525-72694544 | Msa1267450:intron | 40.0% |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr8_2:72694586-72694605 | None:intergenic | 40.0% | |
| ACAGTCGACAAAAGCAGAGT+CGG | + | chr8_2:72690873-72690892 | None:intergenic | 45.0% | |
| AAAAAATCCGAAAGCCTCGC+CGG | - | chr8_2:72690950-72690969 | Msa1267450:intron | 45.0% | |
| !! | CGGAAAGTGTCTTCAAATCG+AGG | - | chr8_2:72690970-72690989 | Msa1267450:intron | 45.0% |
| GAGGGTTATGATTTCAACCG+CGG | - | chr8_2:72690989-72691008 | Msa1267450:intron | 45.0% | |
| CTCAAATCCATGCTCACTAC+TGG | - | chr8_2:72691031-72691050 | Msa1267450:intron | 45.0% | |
| !! | GGTTTTCAAGCATCCAACCT+CGG | - | chr8_2:72691052-72691071 | Msa1267450:intron | 45.0% |
| ! | GGCTACGTGTAAAGTGTTTC+TGG | - | chr8_2:72691259-72691278 | Msa1267450:three_prime_UTR | 45.0% |
| CTTCCTTTGTCAGCATCACA+TGG | - | chr8_2:72691328-72691347 | Msa1267450:exon | 45.0% | |
| TCACCATGTGATGCTGACAA+AGG | + | chr8_2:72691334-72691353 | None:intergenic | 45.0% | |
| TGCCTTGCACCAACGTATAA+AGG | - | chr8_2:72691716-72691735 | Msa1267450:CDS | 45.0% | |
| CTCCTTTATACGTTGGTGCA+AGG | + | chr8_2:72691721-72691740 | None:intergenic | 45.0% | |
| TTTGAGCGAAGATAAGCTCC+AGG | + | chr8_2:72691755-72691774 | None:intergenic | 45.0% | |
| GGAGCTTATCTTCGCTCAAA+AGG | - | chr8_2:72691755-72691774 | Msa1267450:CDS | 45.0% | |
| GGAAGGAATGTATGGTGTGT+AGG | - | chr8_2:72692406-72692425 | Msa1267450:intron | 45.0% | |
| TATGGTGTGTAGGTAGCAGT+TGG | - | chr8_2:72692416-72692435 | Msa1267450:intron | 45.0% | |
| ATGGTGTGTAGGTAGCAGTT+GGG | - | chr8_2:72692417-72692436 | Msa1267450:intron | 45.0% | |
| GCTCCCTACCAATATATAGC+AGG | + | chr8_2:72692549-72692568 | None:intergenic | 45.0% | |
| ACGTTTGATTGTTCTGGTGC+TGG | - | chr8_2:72692632-72692651 | Msa1267450:intron | 45.0% | |
| !! | GCCATGTGATTTTAGTGCCT+TGG | - | chr8_2:72692664-72692683 | Msa1267450:intron | 45.0% |
| ! | CCCAAGGCACTAAAATCACA+TGG | + | chr8_2:72692668-72692687 | None:intergenic | 45.0% |
| ACCTTGACTGGAGAATACAC+CGG | - | chr8_2:72692986-72693005 | Msa1267450:intron | 45.0% | |
| !! | GAATACACCGGTTCAATGTC+TGG | - | chr8_2:72692998-72693017 | Msa1267450:intron | 45.0% |
| CACATACACAAGTGAGGAAC+TGG | - | chr8_2:72693075-72693094 | Msa1267450:intron | 45.0% | |
| CATACACAAGTGAGGAACTG+GGG | - | chr8_2:72693077-72693096 | Msa1267450:intron | 45.0% | |
| ATGCCTGGAGTCACATTTAG+TGG | - | chr8_2:72693179-72693198 | Msa1267450:CDS | 45.0% | |
| TGACCACTAAATGTGACTCC+AGG | + | chr8_2:72693185-72693204 | None:intergenic | 45.0% | |
| CTTGTATGCCCAGTAAAGGT+AGG | + | chr8_2:72693419-72693438 | None:intergenic | 45.0% | |
| CTACCTTTACTGGGCATACA+AGG | - | chr8_2:72693417-72693436 | Msa1267450:intron | 45.0% | |
| TTGCCTTGTATGCCCAGTAA+AGG | + | chr8_2:72693423-72693442 | None:intergenic | 45.0% | |
| ! | AATGAGCCATCGGTTAATCC+TGG | + | chr8_2:72693701-72693720 | None:intergenic | 45.0% |
| AGGATTAACCGATGGCTCAT+TGG | - | chr8_2:72693700-72693719 | Msa1267450:intron | 45.0% | |
| GGATTAACCGATGGCTCATT+GGG | - | chr8_2:72693701-72693720 | Msa1267450:intron | 45.0% | |
| ACATTAAGACCACGGTTGTC+AGG | + | chr8_2:72693767-72693786 | None:intergenic | 45.0% | |
| ! | TGACAACCGTGGTCTTAATG+TGG | - | chr8_2:72693766-72693785 | Msa1267450:intron | 45.0% |
| CATGCAGATCCTATGAAGAC+AGG | - | chr8_2:72693917-72693936 | Msa1267450:CDS | 45.0% | |
| AACGCCAACATGATGCGTAA+TGG | - | chr8_2:72693983-72694002 | Msa1267450:intron | 45.0% | |
| TGCACCATTACGCATCATGT+TGG | + | chr8_2:72693990-72694009 | None:intergenic | 45.0% | |
| ! | ATCCAGATGAGGCTGTTTCA+TGG | - | chr8_2:72694068-72694087 | Msa1267450:intron | 45.0% |
| ! | TCCAGATGAGGCTGTTTCAT+GGG | - | chr8_2:72694069-72694088 | Msa1267450:intron | 45.0% |
| GTTTCATGGGGGAAAATACG+AGG | - | chr8_2:72694082-72694101 | Msa1267450:intron | 45.0% | |
| TCGTTGCATCACAATGTACC+TGG | + | chr8_2:72694225-72694244 | None:intergenic | 45.0% | |
| ATGTTTCAGCAACCAGCAGT+GGG | + | chr8_2:72694255-72694274 | None:intergenic | 45.0% | |
| AATGTTTCAGCAACCAGCAG+TGG | + | chr8_2:72694256-72694275 | None:intergenic | 45.0% | |
| TCACAACTCTCAATGGCTTC+AGG | + | chr8_2:72694449-72694468 | None:intergenic | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr8_2:72694718-72694737 | Msa1267450:CDS | 45.0% | |
| !!! | GATTTTAAAAATTATAATTT+TGG | - | chr8_2:72692843-72692862 | Msa1267450:intron | 5.0% |
| TTTGAAGACACTTTCCGGCG+AGG | + | chr8_2:72690967-72690986 | None:intergenic | 50.0% | |
| TTGAATGGCTTCACCGAGGT+TGG | + | chr8_2:72691068-72691087 | None:intergenic | 50.0% | |
| CAACTTGAATGGCTTCACCG+AGG | + | chr8_2:72691072-72691091 | None:intergenic | 50.0% | |
| CGGATGGTTTGACTGGGAAT+TGG | - | chr8_2:72691964-72691983 | Msa1267450:intron | 50.0% | |
| CTGGGAATTGGACCTATGTC+CGG | - | chr8_2:72691976-72691995 | Msa1267450:intron | 50.0% | |
| TGGTGTGTAGGTAGCAGTTG+GGG | - | chr8_2:72692418-72692437 | Msa1267450:intron | 50.0% | |
| !! | GTTCTGGTGCTGGTTCAACT+TGG | - | chr8_2:72692642-72692661 | Msa1267450:intron | 50.0% |
| TGGTTAGACCGGAGTTGAAC+CGG | + | chr8_2:72692962-72692981 | None:intergenic | 50.0% | |
| ACCGGTGTATTCTCCAGTCA+AGG | + | chr8_2:72692990-72693009 | None:intergenic | 50.0% | |
| CATGTCACCCAATGAGCCAT+CGG | + | chr8_2:72693711-72693730 | None:intergenic | 50.0% | |
| !! | TTCTGGAGCTCATCCAGATG+AGG | - | chr8_2:72694057-72694076 | Msa1267450:intron | 50.0% |
| ! | CCAGATGAGGCTGTTTCATG+GGG | - | chr8_2:72694070-72694089 | Msa1267450:intron | 50.0% |
| ! | CAGATGAGGCTGTTTCATGG+GGG | - | chr8_2:72694071-72694090 | Msa1267450:intron | 50.0% |
| AACGATAGCATTCCCACTGC+TGG | - | chr8_2:72694240-72694259 | Msa1267450:intron | 50.0% | |
| AAATTGTACTCCCTCCGTCC+CGG | - | chr8_2:72694565-72694584 | Msa1267450:CDS | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr8_2:72694582-72694601 | None:intergenic | 50.0% | |
| AGAGATTACTACCTCCGTCC+CGG | + | chr8_2:72694735-72694754 | None:intergenic | 50.0% | |
| ACACTTTCCGGCGAGGCTTT+CGG | + | chr8_2:72690960-72690979 | None:intergenic | 55.0% | |
| !! | GCTGTTGATAATCGACGCCG+CGG | + | chr8_2:72691009-72691028 | None:intergenic | 55.0% |
| ACCTATGTCCGGAAGACCGA+GGG | - | chr8_2:72691987-72692006 | Msa1267450:intron | 55.0% | |
| GGTGTGTAGGTAGCAGTTGG+GGG | - | chr8_2:72692419-72692438 | Msa1267450:intron | 55.0% | |
| GTGTGTAGGTAGCAGTTGGG+GGG | - | chr8_2:72692420-72692439 | Msa1267450:intron | 55.0% | |
| ATATGTTACGTCGGACGCCG+TGG | + | chr8_2:72693115-72693134 | None:intergenic | 55.0% | |
| CGGCGTCCGACGTAACATAT+TGG | - | chr8_2:72693115-72693134 | Msa1267450:intron | 55.0% | |
| AGGACTGCCAGTGTTGTGGA+AGG | + | chr8_2:72693747-72693766 | None:intergenic | 55.0% | |
| TGTCAGGACTGCCAGTGTTG+TGG | + | chr8_2:72693751-72693770 | None:intergenic | 55.0% | |
| CCCCATGAAACAGCCTCATC+TGG | + | chr8_2:72694073-72694092 | None:intergenic | 55.0% | |
| AGGTGTGGCTGGGATCTTGA+TGG | - | chr8_2:72694328-72694347 | Msa1267450:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr8_2:72694578-72694597 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr8_2:72694721-72694740 | Msa1267450:CDS | 55.0% | |
| GACCTATGTCCGGAAGACCG+AGG | - | chr8_2:72691986-72692005 | Msa1267450:intron | 60.0% | |
| ACCCTCGGTCTTCCGGACAT+AGG | + | chr8_2:72691991-72692010 | None:intergenic | 60.0% | |
| AGGTCTGACCCTCGGTCTTC+CGG | + | chr8_2:72691998-72692017 | None:intergenic | 60.0% | |
| ACTGGCAGTCCTGACAACCG+TGG | - | chr8_2:72693755-72693774 | Msa1267450:intron | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr8_2:72694579-72694598 | None:intergenic | 60.0% | |
| TGGGGTTCGAACCCCAGCCA+CGG | - | chr8_2:72693095-72693114 | Msa1267450:intron | 65.0% | |
| TTACGTCGGACGCCGTGGCT+GGG | + | chr8_2:72693110-72693129 | None:intergenic | 65.0% | |
| TACGTCGGACGCCGTGGCTG+GGG | + | chr8_2:72693109-72693128 | None:intergenic | 70.0% | |
| GTTACGTCGGACGCCGTGGC+TGG | + | chr8_2:72693111-72693130 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 72690822 | 72694823 | 72690822 | ID=Msa1267450;Name=Msa1267450 |
| chr8_2 | mRNA | 72690822 | 72694823 | 72690822 | ID=Msa1267450-mRNA-1;Parent=Msa1267450;Name=Msa1267450-mRNA-1;_AED=0.26;_eAED=0.24;_QI=32|0.71|0.75|1|0.85|0.75|8|344|405 |
| chr8_2 | exon | 72690822 | 72690888 | 72690822 | ID=Msa1267450-mRNA-1:exon:24673;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72691065 | 72691419 | 72691065 | ID=Msa1267450-mRNA-1:exon:24672;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72691522 | 72691968 | 72691522 | ID=Msa1267450-mRNA-1:exon:24671;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72692207 | 72692293 | 72692207 | ID=Msa1267450-mRNA-1:exon:24670;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72693135 | 72693217 | 72693135 | ID=Msa1267450-mRNA-1:exon:24669;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72693854 | 72693980 | 72693854 | ID=Msa1267450-mRNA-1:exon:24668;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72694296 | 72694442 | 72694296 | ID=Msa1267450-mRNA-1:exon:24667;Parent=Msa1267450-mRNA-1 |
| chr8_2 | exon | 72694543 | 72694823 | 72694543 | ID=Msa1267450-mRNA-1:exon:24666;Parent=Msa1267450-mRNA-1 |
| chr8_2 | five_prime_UTR | 72694792 | 72694823 | 72694792 | ID=Msa1267450-mRNA-1:five_prime_utr;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72694543 | 72694791 | 72694543 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72694296 | 72694442 | 72694296 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72693854 | 72693980 | 72693854 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72693135 | 72693217 | 72693135 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72692207 | 72692293 | 72692207 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72691522 | 72691968 | 72691522 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | CDS | 72691342 | 72691419 | 72691342 | ID=Msa1267450-mRNA-1:cds;Parent=Msa1267450-mRNA-1 |
| chr8_2 | three_prime_UTR | 72691065 | 72691341 | 72691065 | ID=Msa1267450-mRNA-1:three_prime_utr;Parent=Msa1267450-mRNA-1 |
| chr8_2 | three_prime_UTR | 72690822 | 72690888 | 72690822 | ID=Msa1267450-mRNA-1:three_prime_utr;Parent=Msa1267450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
