Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203450 | VDD34524.1 | 77.099 | 393 | 68 | 5 | 19 | 403 | 2 | 380 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203450 | sp|Q9FI94|DHYS_ARATH | 75.827 | 393 | 52 | 4 | 19 | 403 | 2 | 359 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1131260 | Msa1203450 | 0.911047 | 9.455274e-83 | -8.615850e-47 |
| Msa1203450 | Msa1267450 | 0.951626 | 1.373977e-109 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203450 | MtrunA17_Chr8g0376541 | 80.702 | 399 | 35 | 3 | 15 | 406 | 3 | 366 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203450 | AT5G05920.1 | 75.827 | 393 | 52 | 4 | 19 | 403 | 2 | 359 | 0.0 | 609 |
| Msa1203450 | AT5G05920.2 | 77.491 | 271 | 26 | 2 | 133 | 403 | 6 | 241 | 1.74e-152 | 431 |
| Msa1203450 | AT5G05920.3 | 73.301 | 206 | 20 | 2 | 198 | 403 | 1 | 171 | 3.15e-103 | 303 |
Find 109 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGATTTGAAGACACTTTC+CGG | 0.186586 | 8_1:+57686549 | None:intergenic |
| ACTTCTAATCTTATCTCTTC+TGG | 0.201893 | 8_1:-57686237 | Msa1203450:CDS |
| GAATTTGATGGAAGTGATTC+TGG | 0.236275 | 8_1:-57683506 | Msa1203450:CDS |
| GAATCGAATCGGTAATTTAT+TGG | 0.240496 | 8_1:-57685789 | Msa1203450:CDS |
| GGCTACGTGTAAAGTGTTTC+TGG | 0.243992 | 8_1:-57686265 | Msa1203450:CDS |
| ATTTGCAATAATTGTCATTA+GGG | 0.270000 | 8_1:+57685765 | None:intergenic |
| GGAATCATAACTAAAATAAT+TGG | 0.276859 | 8_1:-57683692 | Msa1203450:CDS |
| TTGGCAATGCAACAGATATA+AGG | 0.280747 | 8_1:-57683673 | Msa1203450:CDS |
| GCAATGCTAACTATATTCTT+TGG | 0.283439 | 8_1:-57683046 | Msa1203450:three_prime_UTR |
| TGAAACCTCTTCATTGATAA+AGG | 0.303881 | 8_1:-57683258 | Msa1203450:exon |
| AATTTGCAATAATTGTCATT+AGG | 0.309498 | 8_1:+57685764 | None:intergenic |
| ATGAAAGCTCCTACCTTTAC+TGG | 0.310474 | 8_1:-57684139 | Msa1203450:CDS |
| ATGGGTTGAATTAGCTTGAT+TGG | 0.321932 | 8_1:-57686335 | Msa1203450:intron |
| ATCCAAGTTAATAGCTCGTT+TGG | 0.325038 | 8_1:-57684177 | Msa1203450:CDS |
| GGTTCGCTGTCAAAAGTAAA+AGG | 0.345503 | 8_1:-57683237 | Msa1203450:three_prime_UTR |
| GTTAATCCTGGACAATAAAC+TGG | 0.349470 | 8_1:+57683860 | None:intergenic |
| TCACAACTCTCAATGGCTTC+AGG | 0.353854 | 8_1:+57683099 | None:intergenic |
| CATTTGATTAACAACTTGAA+TGG | 0.354309 | 8_1:+57686438 | None:intergenic |
| ACACTTTCCGGCGAGGCTTT+CGG | 0.357612 | 8_1:+57686561 | None:intergenic |
| AATACTGCACAAGAATTTGA+TGG | 0.361085 | 8_1:-57683518 | Msa1203450:CDS |
| TGCCTTGCACCAACGTATAA+AGG | 0.362855 | 8_1:-57685854 | Msa1203450:CDS |
| TGACAATTATTGCAAATTCC+AGG | 0.364738 | 8_1:-57685759 | Msa1203450:CDS |
| ATGTACAGCTTCACCATTCA+TGG | 0.365986 | 8_1:+57683649 | None:intergenic |
| ATAATCATGCCTGTCTTCAT+AGG | 0.379415 | 8_1:+57683620 | None:intergenic |
| TGACCGTCTTGTTATTCATA+AGG | 0.387636 | 8_1:-57683168 | Msa1203450:three_prime_UTR |
| CCCCATGAAACAGCCTCATC+TGG | 0.392601 | 8_1:+57683476 | None:intergenic |
| AGGATTAACCGATGGCTCAT+TGG | 0.403351 | 8_1:-57683846 | Msa1203450:CDS |
| GTTTATCAACTATTGCTGAT+TGG | 0.403658 | 8_1:-57682927 | Msa1203450:three_prime_UTR |
| CATGTTATTGTTACAACTAC+AGG | 0.408408 | 8_1:-57685902 | Msa1203450:CDS |
| ATTAAATGTCAGTGGCAAAC+TGG | 0.410835 | 8_1:+57683193 | None:intergenic |
| GCTACGTGTAAAGTGTTTCT+GGG | 0.412284 | 8_1:-57686264 | Msa1203450:CDS |
| AAAGGAGATTTCTCTTTGCC+TGG | 0.416263 | 8_1:-57685836 | Msa1203450:CDS |
| ATCCAGATGAGGCTGTTTCA+TGG | 0.429972 | 8_1:-57683478 | Msa1203450:CDS |
| TGGCAATGCAACAGATATAA+GGG | 0.431616 | 8_1:-57683672 | Msa1203450:CDS |
| CTCAAATCCATGCTCACTAC+TGG | 0.433323 | 8_1:-57686487 | Msa1203450:CDS |
| CATTCAAGTTGTTAATCAAA+TGG | 0.437638 | 8_1:-57686437 | Msa1203450:intron |
| ACATTAAGACCACGGTTGTC+AGG | 0.437997 | 8_1:+57683782 | None:intergenic |
| TCACTACAATCGTCAGTAAT+GGG | 0.439639 | 8_1:+57686297 | None:intergenic |
| GGATTAACCGATGGCTCATT+GGG | 0.439770 | 8_1:-57683845 | Msa1203450:CDS |
| CGATTGTAGTGATCGGAAAT+CGG | 0.442152 | 8_1:-57686286 | Msa1203450:CDS |
| AATATTCCAGTTTATTGTCC+AGG | 0.444941 | 8_1:-57683866 | Msa1203450:CDS |
| ACTATATTCTTTGGAACTGT+GGG | 0.456420 | 8_1:-57683037 | Msa1203450:three_prime_UTR |
| CTACCTTTACTGGGCATACA+AGG | 0.457425 | 8_1:-57684129 | Msa1203450:intron |
| TTGAATGGCTTCACCGAGGT+TGG | 0.457978 | 8_1:+57686453 | None:intergenic |
| TCAAAAGTAAAAGGTGTGGC+TGG | 0.460091 | 8_1:-57683228 | Msa1203450:three_prime_UTR |
| TCCAGATGAGGCTGTTTCAT+GGG | 0.464019 | 8_1:-57683477 | Msa1203450:CDS |
| TCCAAGTTAATAGCTCGTTT+GGG | 0.467798 | 8_1:-57684176 | Msa1203450:CDS |
| CAACAATTCACAACTCTCAA+TGG | 0.471735 | 8_1:+57683092 | None:intergenic |
| GCGTTGCAAATGTGATGTTT+CGG | 0.480473 | 8_1:+57683581 | None:intergenic |
| ATTATTGCAAATTCCAGGAC+TGG | 0.481570 | 8_1:-57685754 | Msa1203450:CDS |
| AACTATATTCTTTGGAACTG+TGG | 0.483607 | 8_1:-57683038 | Msa1203450:three_prime_UTR |
| GGAGCTTATCTTCGCTCAAA+AGG | 0.483770 | 8_1:-57685815 | Msa1203450:CDS |
| ATCACTACAATCGTCAGTAA+TGG | 0.493546 | 8_1:+57686296 | None:intergenic |
| TCCCAAACGAGCTATTAACT+TGG | 0.493827 | 8_1:+57684175 | None:intergenic |
| AATAATGAATTGCTTCTGAA+TGG | 0.498479 | 8_1:+57683122 | None:intergenic |
| CCTAGGTCGAATCGAAACTT+AGG | 0.510509 | 8_1:-57686696 | None:intergenic |
| CTTCCTTTGTCAGCATCACA+TGG | 0.513831 | 8_1:-57686196 | Msa1203450:intron |
| TTGCCTTGTATGCCCAGTAA+AGG | 0.514374 | 8_1:+57684126 | None:intergenic |
| AATGAGCCATCGGTTAATCC+TGG | 0.515125 | 8_1:+57683848 | None:intergenic |
| AGGATCTGCGAAAACTGTTA+AGG | 0.517573 | 8_1:-57683444 | Msa1203450:intron |
| AACGATAGCATTCCCACTGC+TGG | 0.520093 | 8_1:-57683305 | Msa1203450:CDS |
| AGGTGTGGCTGGGATCTTGA+TGG | 0.529055 | 8_1:-57683217 | Msa1203450:three_prime_UTR |
| CTCCTTTATACGTTGGTGCA+AGG | 0.531084 | 8_1:+57685852 | None:intergenic |
| TCAAAAGGATTGAATCGAAT+CGG | 0.532537 | 8_1:-57685800 | Msa1203450:CDS |
| GCAGTAAAGAGTAAAATGAA+TGG | 0.534821 | 8_1:+57683736 | None:intergenic |
| AAATAGGAATAATCCAGTCC+TGG | 0.541617 | 8_1:+57685741 | None:intergenic |
| GTGAATTGTTGATATAATTG+TGG | 0.545985 | 8_1:-57683080 | Msa1203450:three_prime_UTR |
| GCGAACCTTTATCAATGAAG+AGG | 0.556685 | 8_1:+57683253 | None:intergenic |
| CATGCAGATCCTATGAAGAC+AGG | 0.558786 | 8_1:-57683629 | Msa1203450:CDS |
| TGCAAATGTGATGTTTCGGA+AGG | 0.562235 | 8_1:+57683585 | None:intergenic |
| TTTGAGCGAAGATAAGCTCC+AGG | 0.562914 | 8_1:+57685818 | None:intergenic |
| CAAAAGTAAAAGGTGTGGCT+GGG | 0.565525 | 8_1:-57683227 | Msa1203450:three_prime_UTR |
| GAGAAATCTCCTTTATACGT+TGG | 0.568029 | 8_1:+57685845 | None:intergenic |
| TTTCATTCCTTCCACAACAC+TGG | 0.571917 | 8_1:-57683809 | Msa1203450:CDS |
| AAACGAGCTATTAACTTGGA+TGG | 0.573229 | 8_1:+57684179 | None:intergenic |
| ACAGATATAAGGGCCATGAA+TGG | 0.578881 | 8_1:-57683662 | Msa1203450:CDS |
| CCAGATGAGGCTGTTTCATG+GGG | 0.578985 | 8_1:-57683476 | Msa1203450:CDS |
| CTTGTATGCCCAGTAAAGGT+AGG | 0.581698 | 8_1:+57684130 | None:intergenic |
| AATGTTTCAGCAACCAGCAG+TGG | 0.585353 | 8_1:+57683292 | None:intergenic |
| TGTCAGGACTGCCAGTGTTG+TGG | 0.586668 | 8_1:+57683798 | None:intergenic |
| GGTTGAATTAGCTTGATTGG+AGG | 0.590957 | 8_1:-57686332 | Msa1203450:intron |
| TATTGTCCAGGATTAACCGA+TGG | 0.595026 | 8_1:-57683854 | Msa1203450:CDS |
| TGACAACCGTGGTCTTAATG+TGG | 0.596650 | 8_1:-57683780 | Msa1203450:CDS |
| ACAGTCGACAAAAGCAGAGT+CGG | 0.598115 | 8_1:+57686648 | None:intergenic |
| CGGAAAGTGTCTTCAAATCG+AGG | 0.609261 | 8_1:-57686548 | Msa1203450:CDS |
| CTTAATGTGGACATAGTGCA+AGG | 0.610797 | 8_1:-57683767 | Msa1203450:CDS |
| TGAAAGCTCCTACCTTTACT+GGG | 0.613009 | 8_1:-57684138 | Msa1203450:CDS |
| TTCTGGAGCTCATCCAGATG+AGG | 0.617682 | 8_1:-57683489 | Msa1203450:CDS |
| CGGTCAAAATTAAATGTCAG+TGG | 0.618761 | 8_1:+57683185 | None:intergenic |
| AACGCCAACATGATGCGTAA+TGG | 0.620030 | 8_1:-57683563 | Msa1203450:CDS |
| CATGTCACCCAATGAGCCAT+CGG | 0.626979 | 8_1:+57683838 | None:intergenic |
| ATGTTTCAGCAACCAGCAGT+GGG | 0.629148 | 8_1:+57683293 | None:intergenic |
| TTGAAAACCAGTAGTGAGCA+TGG | 0.634888 | 8_1:+57686480 | None:intergenic |
| TGCACCATTACGCATCATGT+TGG | 0.635711 | 8_1:+57683559 | None:intergenic |
| TTACTGACGATTGTAGTGAT+CGG | 0.636960 | 8_1:-57686293 | Msa1203450:CDS |
| GGAAAGTGTCTTCAAATCGA+GGG | 0.644614 | 8_1:-57686547 | Msa1203450:CDS |
| GTTGAAGGAACAAACTCATG+AGG | 0.655135 | 8_1:-57685708 | Msa1203450:intron |
| TTTGAAGACACTTTCCGGCG+AGG | 0.658661 | 8_1:+57686554 | None:intergenic |
| AGGACTGCCAGTGTTGTGGA+AGG | 0.670043 | 8_1:+57683802 | None:intergenic |
| TCACCATGTGATGCTGACAA+AGG | 0.671310 | 8_1:+57686193 | None:intergenic |
| GAGGGTTATGATTTCAACCG+CGG | 0.671769 | 8_1:-57686529 | Msa1203450:CDS |
| GTTATTGTTACAACTACAGG+TGG | 0.672134 | 8_1:-57685899 | Msa1203450:CDS |
| GCTGTCAAAAGTAAAAGGTG+TGG | 0.689064 | 8_1:-57683232 | Msa1203450:three_prime_UTR |
| GGACCTTATGAATAACAAGA+CGG | 0.697207 | 8_1:+57683165 | None:intergenic |
| CTATGTCCACATTAAGACCA+CGG | 0.698384 | 8_1:+57683774 | None:intergenic |
| ACTGGCAGTCCTGACAACCG+TGG | 0.720073 | 8_1:-57683791 | Msa1203450:CDS |
| GCTGTTGATAATCGACGCCG+CGG | 0.724424 | 8_1:+57686512 | None:intergenic |
| CAACTTGAATGGCTTCACCG+AGG | 0.725512 | 8_1:+57686449 | None:intergenic |
| CAGATGAGGCTGTTTCATGG+GGG | 0.740121 | 8_1:-57683475 | Msa1203450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAATTATAATTTT+GGG | - | chr8_1:57684909-57684928 | Msa1203450:intron | 0.0% |
| !! | TATTATAAATTAACATTTCA+AGG | + | chr8_1:57684199-57684218 | None:intergenic | 10.0% |
| !!! | ACATTTTTAGTTTAATATTT+TGG | - | chr8_1:57684950-57684969 | Msa1203450:intron | 10.0% |
| !!! | CATTTTTAGTTTAATATTTT+GGG | - | chr8_1:57684951-57684970 | Msa1203450:intron | 10.0% |
| !! | AATATATATGATCTAATCAA+AGG | + | chr8_1:57683562-57683581 | None:intergenic | 15.0% |
| !! | AACAATATTAAAAAACCATT+TGG | + | chr8_1:57683657-57683676 | None:intergenic | 15.0% |
| !!! | TTTTAATATTGTTAATGACA+TGG | - | chr8_1:57683664-57683683 | Msa1203450:CDS | 15.0% |
| !! | TTCAACATTTGATTAAAAAT+AGG | + | chr8_1:57683889-57683908 | None:intergenic | 15.0% |
| !!! | TATTTTTAATCAAATGTTGA+AGG | - | chr8_1:57683888-57683907 | Msa1203450:intron | 15.0% |
| !! | TAAAATCTATTTCCAATAAA+AGG | + | chr8_1:57684895-57684914 | None:intergenic | 15.0% |
| !! | ATATTATGTTTAATTACTAC+CGG | - | chr8_1:57685005-57685024 | Msa1203450:intron | 15.0% |
| !!! | ATAATCTCATTGATATTTTT+TGG | - | chr8_1:57685709-57685728 | Msa1203450:CDS | 15.0% |
| !! | ATTTGCAATAATTGTCATTA+GGG | + | chr8_1:57683849-57683868 | None:intergenic | 20.0% |
| !! | AATTTGCAATAATTGTCATT+AGG | + | chr8_1:57683850-57683869 | None:intergenic | 20.0% |
| !! | TACAAAAGAAAGGTTTAAAA+AGG | + | chr8_1:57684071-57684090 | None:intergenic | 20.0% |
| !!! | AAGAAAAGTTTTAACATTTG+TGG | + | chr8_1:57684164-57684183 | None:intergenic | 20.0% |
| !! | CAAAATTTATTACTGAAATC+TGG | + | chr8_1:57684804-57684823 | None:intergenic | 20.0% |
| !! | TATTCTTCATTTCTGTTAAA+GGG | + | chr8_1:57684832-57684851 | None:intergenic | 20.0% |
| !!! | GTTTAATATTTTGGGTTTAA+TGG | - | chr8_1:57684959-57684978 | Msa1203450:intron | 20.0% |
| !!! | TTATATTTTACCTCTGATTA+AGG | - | chr8_1:57685328-57685347 | Msa1203450:intron | 20.0% |
| !!! | TCTTATTTACTCAATAACTT+CGG | - | chr8_1:57685665-57685684 | Msa1203450:intron | 20.0% |
| !! | GGAATCATAACTAAAATAAT+TGG | - | chr8_1:57685919-57685938 | Msa1203450:intron | 20.0% |
| !!! | ATAAAAGGACATAGTTTTAA+GGG | + | chr8_1:57686259-57686278 | None:intergenic | 20.0% |
| !!! | AATAAAAGGACATAGTTTTA+AGG | + | chr8_1:57686260-57686279 | None:intergenic | 20.0% |
| !!! | GTAAAAAAATGCTTTTTATG+TGG | + | chr8_1:57686470-57686489 | None:intergenic | 20.0% |
| ! | CATTTGATTAACAACTTGAA+TGG | + | chr8_1:57683176-57683195 | None:intergenic | 25.0% |
| !!! | CATTCAAGTTGTTAATCAAA+TGG | - | chr8_1:57683174-57683193 | Msa1203450:three_prime_UTR | 25.0% |
| !! | GCTTATAAAGTTTTTGTCTT+TGG | - | chr8_1:57683250-57683269 | Msa1203450:exon | 25.0% |
| !!! | TCATAATAACTTCTAGCTTA+TGG | + | chr8_1:57683455-57683474 | None:intergenic | 25.0% |
| ! | AAGCTAGAAGTTATTATGAA+AGG | - | chr8_1:57683456-57683475 | Msa1203450:CDS | 25.0% |
| ! | TAATCAAAGGAAATTGCAAT+AGG | + | chr8_1:57683549-57683568 | None:intergenic | 25.0% |
| ! | TCATATATATTCAAAGATCC+TGG | - | chr8_1:57683571-57683590 | Msa1203450:CDS | 25.0% |
| !!! | ACTACATAAGTTTTGTAATG+CGG | + | chr8_1:57683954-57683973 | None:intergenic | 25.0% |
| ! | TTTGTCAAGGTAATCTAAAT+CGG | - | chr8_1:57683980-57683999 | Msa1203450:intron | 25.0% |
| !! | CCAATAAATTCAGATTTTCA+AGG | + | chr8_1:57684101-57684120 | None:intergenic | 25.0% |
| ! | CCTTGAAAATCTGAATTTAT+TGG | - | chr8_1:57684098-57684117 | Msa1203450:intron | 25.0% |
| ! | AGATCTAATAATACATCTGT+AGG | - | chr8_1:57684327-57684346 | Msa1203450:intron | 25.0% |
| ! | TAATAATACATCTGTAGGAA+TGG | - | chr8_1:57684332-57684351 | Msa1203450:intron | 25.0% |
| ! | AGGTATTTGTATAATGTAGT+TGG | - | chr8_1:57684517-57684536 | Msa1203450:intron | 25.0% |
| ! | CTATTCTTCATTTCTGTTAA+AGG | + | chr8_1:57684833-57684852 | None:intergenic | 25.0% |
| !! | AATCATTTCGTTCCTTTTAT+TGG | - | chr8_1:57684880-57684899 | Msa1203450:intron | 25.0% |
| ! | CCAAAGTAATTAAAATCAAC+TGG | + | chr8_1:57685215-57685234 | None:intergenic | 25.0% |
| !!! | CCAGTTGATTTTAATTACTT+TGG | - | chr8_1:57685212-57685231 | Msa1203450:intron | 25.0% |
| ! | TAAGAATACATATATTCTGC+TGG | - | chr8_1:57685281-57685300 | Msa1203450:intron | 25.0% |
| !!! | ATGGATGATTTTGAAACAAT+TGG | - | chr8_1:57685898-57685917 | Msa1203450:CDS | 25.0% |
| !!! | TAGTTTTAAGGGATATAGTA+CGG | + | chr8_1:57686248-57686267 | None:intergenic | 25.0% |
| ! | AATAATGAATTGCTTCTGAA+TGG | + | chr8_1:57686492-57686511 | None:intergenic | 25.0% |
| ! | GTGAATTGTTGATATAATTG+TGG | - | chr8_1:57686531-57686550 | Msa1203450:CDS | 25.0% |
| !! | TTTTGTCGACTGTGAAAAAA+AGG | - | chr8_1:57682973-57682992 | Msa1203450:three_prime_UTR | 30.0% |
| !!! | AAGTTTTTGTCTTTGGAACA+TGG | - | chr8_1:57683257-57683276 | Msa1203450:exon | 30.0% |
| !!! | AGTTTTTGTCTTTGGAACAT+GGG | - | chr8_1:57683258-57683277 | Msa1203450:exon | 30.0% |
| ACTTCTAATCTTATCTCTTC+TGG | - | chr8_1:57683374-57683393 | Msa1203450:intron | 30.0% | |
| TGATTGATTAATTGCCAATG+AGG | + | chr8_1:57683498-57683517 | None:intergenic | 30.0% | |
| TATATATTCAAAGATCCTGG+TGG | - | chr8_1:57683574-57683593 | Msa1203450:CDS | 30.0% | |
| CTTTATATATTAAAGCCACC+AGG | + | chr8_1:57683592-57683611 | None:intergenic | 30.0% | |
| !! | TGAAAACTTGCTAAACCAAA+TGG | - | chr8_1:57683639-57683658 | Msa1203450:CDS | 30.0% |
| CATGTTATTGTTACAACTAC+AGG | - | chr8_1:57683709-57683728 | Msa1203450:CDS | 30.0% | |
| TCAAAAGGATTGAATCGAAT+CGG | - | chr8_1:57683811-57683830 | Msa1203450:CDS | 30.0% | |
| GAATCGAATCGGTAATTTAT+TGG | - | chr8_1:57683822-57683841 | Msa1203450:CDS | 30.0% | |
| TGACAATTATTGCAAATTCC+AGG | - | chr8_1:57683852-57683871 | Msa1203450:CDS | 30.0% | |
| !! | CTACATAAGTTTTGTAATGC+GGG | + | chr8_1:57683953-57683972 | None:intergenic | 30.0% |
| ! | ATGTAGTTCAGTTTTTGTCA+AGG | - | chr8_1:57683967-57683986 | Msa1203450:intron | 30.0% |
| CATTGTATAAAAGAGAGAAC+TGG | + | chr8_1:57684291-57684310 | None:intergenic | 30.0% | |
| !! | CTTAATAAGCATGTTTTGAG+TGG | - | chr8_1:57684388-57684407 | Msa1203450:intron | 30.0% |
| TACATTCCTACTAGTATCAT+CGG | + | chr8_1:57684447-57684466 | None:intergenic | 30.0% | |
| ATGATACTAGTAGGAATGTA+TGG | - | chr8_1:57684447-57684466 | Msa1203450:intron | 30.0% | |
| AGTTTACACCTGCTATATAT+TGG | - | chr8_1:57684580-57684599 | Msa1203450:intron | 30.0% | |
| ATTATGTTCTTGTTGAGTCA+TGG | - | chr8_1:57684627-57684646 | Msa1203450:intron | 30.0% | |
| GAGTCATGGTTTCTAATAAT+TGG | - | chr8_1:57684641-57684660 | Msa1203450:intron | 30.0% | |
| GATATTACGTTTGATTGTTC+TGG | - | chr8_1:57684668-57684687 | Msa1203450:intron | 30.0% | |
| CACAAATACATAATATCCCA+AGG | + | chr8_1:57684726-57684745 | None:intergenic | 30.0% | |
| GGGATATTATGTATTTGTGA+TGG | - | chr8_1:57684727-57684746 | Msa1203450:intron | 30.0% | |
| AAAATGCCAAAATGTTACGT+CGG | + | chr8_1:57685189-57685208 | None:intergenic | 30.0% | |
| AATATAATCTCCTTCATCAG+AGG | + | chr8_1:57685315-57685334 | None:intergenic | 30.0% | |
| ! | TATTTTACCTCTGATTAAGG+AGG | - | chr8_1:57685331-57685350 | Msa1203450:intron | 30.0% |
| AGGAAACTACAGTATAACAA+TGG | + | chr8_1:57685594-57685613 | None:intergenic | 30.0% | |
| GTTACATACAAAATGCAACA+TGG | - | chr8_1:57685626-57685645 | Msa1203450:intron | 30.0% | |
| AATATTCCAGTTTATTGTCC+AGG | - | chr8_1:57685745-57685764 | Msa1203450:CDS | 30.0% | |
| GCAGTAAAGAGTAAAATGAA+TGG | + | chr8_1:57685878-57685897 | None:intergenic | 30.0% | |
| ! | TCATTTTACTCTTTACTGCA+TGG | - | chr8_1:57685879-57685898 | Msa1203450:CDS | 30.0% |
| ! | AAGACAGGCATGATTATTTT+AGG | - | chr8_1:57685997-57686016 | Msa1203450:intron | 30.0% |
| AATACTGCACAAGAATTTGA+TGG | - | chr8_1:57686093-57686112 | Msa1203450:intron | 30.0% | |
| ! | AACAAGTAGCGAAAGTATAT+AGG | + | chr8_1:57686198-57686217 | None:intergenic | 30.0% |
| TGAAACCTCTTCATTGATAA+AGG | - | chr8_1:57686353-57686372 | Msa1203450:intron | 30.0% | |
| GCAATGCTAACTATATTCTT+TGG | - | chr8_1:57686565-57686584 | Msa1203450:CDS | 30.0% | |
| !! | AACTATATTCTTTGGAACTG+TGG | - | chr8_1:57686573-57686592 | Msa1203450:CDS | 30.0% |
| !! | ACTATATTCTTTGGAACTGT+GGG | - | chr8_1:57686574-57686593 | Msa1203450:CDS | 30.0% |
| !!! | TTAGTTTTGAGGTGTTGAAA+AGG | - | chr8_1:57686602-57686621 | Msa1203450:CDS | 30.0% |
| GTTTATCAACTATTGCTGAT+TGG | - | chr8_1:57686684-57686703 | Msa1203450:exon | 30.0% | |
| !!! | TTCGGATTTTTTGAAGACTG+TGG | + | chr8_1:57683035-57683054 | None:intergenic | 35.0% |
| ! | ATGGGTTGAATTAGCTTGAT+TGG | - | chr8_1:57683276-57683295 | Msa1203450:CDS | 35.0% |
| TCACTACAATCGTCAGTAAT+GGG | + | chr8_1:57683317-57683336 | None:intergenic | 35.0% | |
| ATCACTACAATCGTCAGTAA+TGG | + | chr8_1:57683318-57683337 | None:intergenic | 35.0% | |
| TTACTGACGATTGTAGTGAT+CGG | - | chr8_1:57683318-57683337 | Msa1203450:CDS | 35.0% | |
| AATGAGGAAGTCATTGTCTA+TGG | + | chr8_1:57683482-57683501 | None:intergenic | 35.0% | |
| ATAGACAATGACTTCCTCAT+TGG | - | chr8_1:57683481-57683500 | Msa1203450:CDS | 35.0% | |
| TGGTACTCATGTTATTCTAC+AGG | - | chr8_1:57683684-57683703 | Msa1203450:CDS | 35.0% | |
| GTTATTGTTACAACTACAGG+TGG | - | chr8_1:57683712-57683731 | Msa1203450:CDS | 35.0% | |
| GAGAAATCTCCTTTATACGT+TGG | + | chr8_1:57683769-57683788 | None:intergenic | 35.0% | |
| ATTATTGCAAATTCCAGGAC+TGG | - | chr8_1:57683857-57683876 | Msa1203450:CDS | 35.0% | |
| AAATAGGAATAATCCAGTCC+TGG | + | chr8_1:57683873-57683892 | None:intergenic | 35.0% | |
| TCAAGGTAATCTAAATCGGA+TGG | - | chr8_1:57683984-57684003 | Msa1203450:intron | 35.0% | |
| AGGTGAGTGATACAAAAGAA+AGG | + | chr8_1:57684081-57684100 | None:intergenic | 35.0% | |
| TAAAGTTCCACGTTGCTTAA+AGG | + | chr8_1:57684244-57684263 | None:intergenic | 35.0% | |
| TGTAGGAATGGAATTACTGA+CGG | - | chr8_1:57684344-57684363 | Msa1203450:intron | 35.0% | |
| !! | ATGTTTTGAGTGGCAATAGT+AGG | - | chr8_1:57684398-57684417 | Msa1203450:intron | 35.0% |
| TTGATTCCGATGATACTAGT+AGG | - | chr8_1:57684438-57684457 | Msa1203450:intron | 35.0% | |
| ! | AAAATGATGATGCAGAAGAG+AGG | - | chr8_1:57684497-57684516 | Msa1203450:intron | 35.0% |
| !!! | GGCATTTGTTTTGATGTAAG+TGG | - | chr8_1:57684538-57684557 | Msa1203450:intron | 35.0% |
| ! | TAAGTGGTGCATGTTTGTTA+AGG | - | chr8_1:57684554-57684573 | Msa1203450:intron | 35.0% |
| TACACCTGCTATATATTGGT+AGG | - | chr8_1:57684584-57684603 | Msa1203450:intron | 35.0% | |
| ACACCTGCTATATATTGGTA+GGG | - | chr8_1:57684585-57684604 | Msa1203450:intron | 35.0% | |
| TCAAGGTTTAATGGTTAGAC+CGG | + | chr8_1:57685038-57685057 | None:intergenic | 35.0% | |
| TCTAACCATTAAACCTTGAC+TGG | - | chr8_1:57685039-57685058 | Msa1203450:intron | 35.0% | |
| ATTCTCCAGTCAAGGTTTAA+TGG | + | chr8_1:57685047-57685066 | None:intergenic | 35.0% | |
| AATCAAACCAGACATTGAAC+CGG | + | chr8_1:57685073-57685092 | None:intergenic | 35.0% | |
| GACGAAATGACAATAGCTAT+TGG | - | chr8_1:57685112-57685131 | Msa1203450:intron | 35.0% | |
| AAAAGAACCTCCTTAATCAG+AGG | + | chr8_1:57685341-57685360 | None:intergenic | 35.0% | |
| !!! | CATCTTCCTTTTTTGACAGA+AGG | - | chr8_1:57685398-57685417 | Msa1203450:intron | 35.0% |
| ! | AAACGAGCTATTAACTTGGA+TGG | + | chr8_1:57685435-57685454 | None:intergenic | 35.0% |
| ATCCAAGTTAATAGCTCGTT+TGG | - | chr8_1:57685434-57685453 | Msa1203450:intron | 35.0% | |
| TCCAAGTTAATAGCTCGTTT+GGG | - | chr8_1:57685435-57685454 | Msa1203450:intron | 35.0% | |
| ! | TGCATTTTGTATGTAACTGC+AGG | + | chr8_1:57685623-57685642 | None:intergenic | 35.0% |
| GTTAATCCTGGACAATAAAC+TGG | + | chr8_1:57685754-57685773 | None:intergenic | 35.0% | |
| TTGGCAATGCAACAGATATA+AGG | - | chr8_1:57685938-57685957 | Msa1203450:intron | 35.0% | |
| TGGCAATGCAACAGATATAA+GGG | - | chr8_1:57685939-57685958 | Msa1203450:intron | 35.0% | |
| ATAATCATGCCTGTCTTCAT+AGG | + | chr8_1:57685994-57686013 | None:intergenic | 35.0% | |
| !!! | ACAGGCATGATTATTTTAGG+AGG | - | chr8_1:57686000-57686019 | Msa1203450:intron | 35.0% |
| GAATTTGATGGAAGTGATTC+TGG | - | chr8_1:57686105-57686124 | Msa1203450:intron | 35.0% | |
| !! | TCCTTTTATTTCGCTAAACC+AGG | - | chr8_1:57686270-57686289 | Msa1203450:CDS | 35.0% |
| ACCTGGTTTAGCGAAATAAA+AGG | + | chr8_1:57686274-57686293 | None:intergenic | 35.0% | |
| ATTAAATGTCAGTGGCAAAC+TGG | + | chr8_1:57686421-57686440 | None:intergenic | 35.0% | |
| CGGTCAAAATTAAATGTCAG+TGG | + | chr8_1:57686429-57686448 | None:intergenic | 35.0% | |
| !! | TGACCGTCTTGTTATTCATA+AGG | - | chr8_1:57686443-57686462 | Msa1203450:CDS | 35.0% |
| GGACCTTATGAATAACAAGA+CGG | + | chr8_1:57686449-57686468 | None:intergenic | 35.0% | |
| CAACAATTCACAACTCTCAA+TGG | + | chr8_1:57686522-57686541 | None:intergenic | 35.0% | |
| ! | CTCGATTTGAAGACACTTTC+CGG | + | chr8_1:57683065-57683084 | None:intergenic | 40.0% |
| !! | GGAAAGTGTCTTCAAATCGA+GGG | - | chr8_1:57683064-57683083 | Msa1203450:three_prime_UTR | 40.0% |
| TTGAAAACCAGTAGTGAGCA+TGG | + | chr8_1:57683134-57683153 | None:intergenic | 40.0% | |
| ! | GGTTGAATTAGCTTGATTGG+AGG | - | chr8_1:57683279-57683298 | Msa1203450:CDS | 40.0% |
| CGATTGTAGTGATCGGAAAT+CGG | - | chr8_1:57683325-57683344 | Msa1203450:intron | 40.0% | |
| ! | GCTACGTGTAAAGTGTTTCT+GGG | - | chr8_1:57683347-57683366 | Msa1203450:intron | 40.0% |
| AAAGGAGATTTCTCTTTGCC+TGG | - | chr8_1:57683775-57683794 | Msa1203450:CDS | 40.0% | |
| GTTGAAGGAACAAACTCATG+AGG | - | chr8_1:57683903-57683922 | Msa1203450:intron | 40.0% | |
| TCTAAATCGGATGGTTTGAC+TGG | - | chr8_1:57683993-57684012 | Msa1203450:intron | 40.0% | |
| CTAAATCGGATGGTTTGACT+GGG | - | chr8_1:57683994-57684013 | Msa1203450:intron | 40.0% | |
| GTTATCTCCTTTAAGCAACG+TGG | - | chr8_1:57684234-57684253 | Msa1203450:intron | 40.0% | |
| ATGGAATTACTGACGGAGAA+AGG | - | chr8_1:57684351-57684370 | Msa1203450:intron | 40.0% | |
| AATGTATGGTGTGTAGCAGT+TGG | - | chr8_1:57684461-57684480 | Msa1203450:intron | 40.0% | |
| ATGTATGGTGTGTAGCAGTT+GGG | - | chr8_1:57684462-57684481 | Msa1203450:intron | 40.0% | |
| !! | CCATGTGATTTTAGTGCCTT+GGG | - | chr8_1:57684707-57684726 | Msa1203450:intron | 40.0% |
| CTGAAATCTGGATGCAGATA+GGG | + | chr8_1:57684792-57684811 | None:intergenic | 40.0% | |
| ACTGAAATCTGGATGCAGAT+AGG | + | chr8_1:57684793-57684812 | None:intergenic | 40.0% | |
| !! | AATTACTACCGGTTCAACTC+CGG | - | chr8_1:57685016-57685035 | Msa1203450:intron | 40.0% |
| GAAACTCACATACACAAGTG+AGG | - | chr8_1:57685134-57685153 | Msa1203450:intron | 40.0% | |
| ACATACACAAGTGAGGAACT+GGG | - | chr8_1:57685141-57685160 | Msa1203450:intron | 40.0% | |
| !!! | CTTTGGTTTTTGTCAATGCC+TGG | - | chr8_1:57685229-57685248 | Msa1203450:intron | 40.0% |
| GGATAAAGAACCTCTGATGA+AGG | - | chr8_1:57685302-57685321 | Msa1203450:intron | 40.0% | |
| ACTGCACCTTCTGTCAAAAA+AGG | + | chr8_1:57685407-57685426 | None:intergenic | 40.0% | |
| !!! | TTTTTTGACAGAAGGTGCAG+TGG | - | chr8_1:57685406-57685425 | Msa1203450:intron | 40.0% |
| TCCCAAACGAGCTATTAACT+TGG | + | chr8_1:57685439-57685458 | None:intergenic | 40.0% | |
| ATGAAAGCTCCTACCTTTAC+TGG | - | chr8_1:57685472-57685491 | Msa1203450:intron | 40.0% | |
| TGAAAGCTCCTACCTTTACT+GGG | - | chr8_1:57685473-57685492 | Msa1203450:intron | 40.0% | |
| TATGTAACTGCAGGACATCA+AGG | + | chr8_1:57685614-57685633 | None:intergenic | 40.0% | |
| TATTGTCCAGGATTAACCGA+TGG | - | chr8_1:57685757-57685776 | Msa1203450:CDS | 40.0% | |
| TTTCATTCCTTCCACAACAC+TGG | - | chr8_1:57685802-57685821 | Msa1203450:CDS | 40.0% | |
| CTATGTCCACATTAAGACCA+CGG | + | chr8_1:57685840-57685859 | None:intergenic | 40.0% | |
| CTTAATGTGGACATAGTGCA+AGG | - | chr8_1:57685844-57685863 | Msa1203450:CDS | 40.0% | |
| ACAGATATAAGGGCCATGAA+TGG | - | chr8_1:57685949-57685968 | Msa1203450:intron | 40.0% | |
| ATGTACAGCTTCACCATTCA+TGG | + | chr8_1:57685965-57685984 | None:intergenic | 40.0% | |
| !!! | GGCATGATTATTTTAGGAGG+TGG | - | chr8_1:57686003-57686022 | Msa1203450:intron | 40.0% |
| TGCAAATGTGATGTTTCGGA+AGG | + | chr8_1:57686029-57686048 | None:intergenic | 40.0% | |
| GCGTTGCAAATGTGATGTTT+CGG | + | chr8_1:57686033-57686052 | None:intergenic | 40.0% | |
| AGGATCTGCGAAAACTGTTA+AGG | - | chr8_1:57686167-57686186 | Msa1203450:intron | 40.0% | |
| GCGAACCTTTATCAATGAAG+AGG | + | chr8_1:57686361-57686380 | None:intergenic | 40.0% | |
| GGTTCGCTGTCAAAAGTAAA+AGG | - | chr8_1:57686374-57686393 | Msa1203450:intron | 40.0% | |
| GCTGTCAAAAGTAAAAGGTG+TGG | - | chr8_1:57686379-57686398 | Msa1203450:intron | 40.0% | |
| ! | TCAAAAGTAAAAGGTGTGGC+TGG | - | chr8_1:57686383-57686402 | Msa1203450:intron | 40.0% |
| ! | CAAAAGTAAAAGGTGTGGCT+GGG | - | chr8_1:57686384-57686403 | Msa1203450:intron | 40.0% |
| !!! | TGTGGGTTCTCTTAGTTTTG+AGG | - | chr8_1:57686591-57686610 | Msa1203450:CDS | 40.0% |
| ACAGTCGACAAAAGCAGAGT+CGG | + | chr8_1:57682966-57682985 | None:intergenic | 45.0% | |
| AAAAAATCCGAAAGCCTCGC+CGG | - | chr8_1:57683043-57683062 | Msa1203450:three_prime_UTR | 45.0% | |
| !! | CGGAAAGTGTCTTCAAATCG+AGG | - | chr8_1:57683063-57683082 | Msa1203450:three_prime_UTR | 45.0% |
| GAGGGTTATGATTTCAACCG+CGG | - | chr8_1:57683082-57683101 | Msa1203450:three_prime_UTR | 45.0% | |
| CTCAAATCCATGCTCACTAC+TGG | - | chr8_1:57683124-57683143 | Msa1203450:three_prime_UTR | 45.0% | |
| !! | GGTTTTCAAGCATCCAACCT+CGG | - | chr8_1:57683145-57683164 | Msa1203450:three_prime_UTR | 45.0% |
| ! | GGCTACGTGTAAAGTGTTTC+TGG | - | chr8_1:57683346-57683365 | Msa1203450:intron | 45.0% |
| CTTCCTTTGTCAGCATCACA+TGG | - | chr8_1:57683415-57683434 | Msa1203450:intron | 45.0% | |
| TCACCATGTGATGCTGACAA+AGG | + | chr8_1:57683421-57683440 | None:intergenic | 45.0% | |
| TGCCTTGCACCAACGTATAA+AGG | - | chr8_1:57683757-57683776 | Msa1203450:CDS | 45.0% | |
| CTCCTTTATACGTTGGTGCA+AGG | + | chr8_1:57683762-57683781 | None:intergenic | 45.0% | |
| TTTGAGCGAAGATAAGCTCC+AGG | + | chr8_1:57683796-57683815 | None:intergenic | 45.0% | |
| GGAGCTTATCTTCGCTCAAA+AGG | - | chr8_1:57683796-57683815 | Msa1203450:CDS | 45.0% | |
| GCTCCCTACCAATATATAGC+AGG | + | chr8_1:57684591-57684610 | None:intergenic | 45.0% | |
| ACGTTTGATTGTTCTGGTGC+TGG | - | chr8_1:57684674-57684693 | Msa1203450:intron | 45.0% | |
| !! | GCCATGTGATTTTAGTGCCT+TGG | - | chr8_1:57684706-57684725 | Msa1203450:intron | 45.0% |
| ! | CCCAAGGCACTAAAATCACA+TGG | + | chr8_1:57684710-57684729 | None:intergenic | 45.0% |
| ACCTTGACTGGAGAATACAC+CGG | - | chr8_1:57685051-57685070 | Msa1203450:intron | 45.0% | |
| !! | GAATACACCGGTTCAATGTC+TGG | - | chr8_1:57685063-57685082 | Msa1203450:intron | 45.0% |
| CACATACACAAGTGAGGAAC+TGG | - | chr8_1:57685140-57685159 | Msa1203450:intron | 45.0% | |
| CATACACAAGTGAGGAACTG+GGG | - | chr8_1:57685142-57685161 | Msa1203450:intron | 45.0% | |
| ATGCCTGGAGTCACATTTAG+TGG | - | chr8_1:57685244-57685263 | Msa1203450:intron | 45.0% | |
| TGACCACTAAATGTGACTCC+AGG | + | chr8_1:57685250-57685269 | None:intergenic | 45.0% | |
| CTTGTATGCCCAGTAAAGGT+AGG | + | chr8_1:57685484-57685503 | None:intergenic | 45.0% | |
| CTACCTTTACTGGGCATACA+AGG | - | chr8_1:57685482-57685501 | Msa1203450:intron | 45.0% | |
| TTGCCTTGTATGCCCAGTAA+AGG | + | chr8_1:57685488-57685507 | None:intergenic | 45.0% | |
| ! | AATGAGCCATCGGTTAATCC+TGG | + | chr8_1:57685766-57685785 | None:intergenic | 45.0% |
| AGGATTAACCGATGGCTCAT+TGG | - | chr8_1:57685765-57685784 | Msa1203450:CDS | 45.0% | |
| GGATTAACCGATGGCTCATT+GGG | - | chr8_1:57685766-57685785 | Msa1203450:CDS | 45.0% | |
| ACATTAAGACCACGGTTGTC+AGG | + | chr8_1:57685832-57685851 | None:intergenic | 45.0% | |
| ! | TGACAACCGTGGTCTTAATG+TGG | - | chr8_1:57685831-57685850 | Msa1203450:CDS | 45.0% |
| CATGCAGATCCTATGAAGAC+AGG | - | chr8_1:57685982-57686001 | Msa1203450:intron | 45.0% | |
| AACGCCAACATGATGCGTAA+TGG | - | chr8_1:57686048-57686067 | Msa1203450:intron | 45.0% | |
| TGCACCATTACGCATCATGT+TGG | + | chr8_1:57686055-57686074 | None:intergenic | 45.0% | |
| ! | ATCCAGATGAGGCTGTTTCA+TGG | - | chr8_1:57686133-57686152 | Msa1203450:intron | 45.0% |
| ! | TCCAGATGAGGCTGTTTCAT+GGG | - | chr8_1:57686134-57686153 | Msa1203450:intron | 45.0% |
| GTTTCATGGGGGAAAATACG+AGG | - | chr8_1:57686147-57686166 | Msa1203450:intron | 45.0% | |
| TCGTTGCATCACAATGTACC+TGG | + | chr8_1:57686291-57686310 | None:intergenic | 45.0% | |
| ATGTTTCAGCAACCAGCAGT+GGG | + | chr8_1:57686321-57686340 | None:intergenic | 45.0% | |
| AATGTTTCAGCAACCAGCAG+TGG | + | chr8_1:57686322-57686341 | None:intergenic | 45.0% | |
| TCACAACTCTCAATGGCTTC+AGG | + | chr8_1:57686515-57686534 | None:intergenic | 45.0% | |
| !!! | GATTTTAAAAATTATAATTT+TGG | - | chr8_1:57684908-57684927 | Msa1203450:intron | 5.0% |
| TTTGAAGACACTTTCCGGCG+AGG | + | chr8_1:57683060-57683079 | None:intergenic | 50.0% | |
| TTGAATGGCTTCACCGAGGT+TGG | + | chr8_1:57683161-57683180 | None:intergenic | 50.0% | |
| CAACTTGAATGGCTTCACCG+AGG | + | chr8_1:57683165-57683184 | None:intergenic | 50.0% | |
| CGGATGGTTTGACTGGGAAT+TGG | - | chr8_1:57684000-57684019 | Msa1203450:intron | 50.0% | |
| CTGGGAATTGGACCTATGTC+CGG | - | chr8_1:57684012-57684031 | Msa1203450:intron | 50.0% | |
| CCTCAAACCACTGGTACTCA+GGG | + | chr8_1:57684042-57684061 | None:intergenic | 50.0% | |
| CCTGAGTACCAGTGGTTTGA+GGG | - | chr8_1:57684040-57684059 | Msa1203450:intron | 50.0% | |
| GCTTTGCATCCAGATTCGAC+TGG | - | chr8_1:57684761-57684780 | Msa1203450:intron | 50.0% | |
| TGGTTAGACCGGAGTTGAAC+CGG | + | chr8_1:57685027-57685046 | None:intergenic | 50.0% | |
| ACCGGTGTATTCTCCAGTCA+AGG | + | chr8_1:57685055-57685074 | None:intergenic | 50.0% | |
| CATGTCACCCAATGAGCCAT+CGG | + | chr8_1:57685776-57685795 | None:intergenic | 50.0% | |
| !! | TTCTGGAGCTCATCCAGATG+AGG | - | chr8_1:57686122-57686141 | Msa1203450:intron | 50.0% |
| ! | CCAGATGAGGCTGTTTCATG+GGG | - | chr8_1:57686135-57686154 | Msa1203450:intron | 50.0% |
| ! | CAGATGAGGCTGTTTCATGG+GGG | - | chr8_1:57686136-57686155 | Msa1203450:intron | 50.0% |
| AACGATAGCATTCCCACTGC+TGG | - | chr8_1:57686306-57686325 | Msa1203450:CDS | 50.0% | |
| ACACTTTCCGGCGAGGCTTT+CGG | + | chr8_1:57683053-57683072 | None:intergenic | 55.0% | |
| !! | GCTGTTGATAATCGACGCCG+CGG | + | chr8_1:57683102-57683121 | None:intergenic | 55.0% |
| ACTCAGGGTCTTCCGGACAT+AGG | + | chr8_1:57684027-57684046 | None:intergenic | 55.0% | |
| CACTGGTACTCAGGGTCTTC+CGG | + | chr8_1:57684034-57684053 | None:intergenic | 55.0% | |
| CCCTGAGTACCAGTGGTTTG+AGG | - | chr8_1:57684039-57684058 | Msa1203450:intron | 55.0% | |
| CCCTCAAACCACTGGTACTC+AGG | + | chr8_1:57684043-57684062 | None:intergenic | 55.0% | |
| AGGTCTGACCCTCAAACCAC+TGG | + | chr8_1:57684051-57684070 | None:intergenic | 55.0% | |
| !! | TGTTCTGGTGCTGGTTCGAC+TGG | - | chr8_1:57684683-57684702 | Msa1203450:intron | 55.0% |
| !! | GTTCTGGTGCTGGTTCGACT+GGG | - | chr8_1:57684684-57684703 | Msa1203450:intron | 55.0% |
| AGGGTCGAACCAGTCGAATC+TGG | + | chr8_1:57684773-57684792 | None:intergenic | 55.0% | |
| AAATGTTACGTCGGACGCCG+TGG | + | chr8_1:57685180-57685199 | None:intergenic | 55.0% | |
| ! | CGGCGTCCGACGTAACATTT+TGG | - | chr8_1:57685180-57685199 | Msa1203450:intron | 55.0% |
| AGGACTGCCAGTGTTGTGGA+AGG | + | chr8_1:57685812-57685831 | None:intergenic | 55.0% | |
| TGTCAGGACTGCCAGTGTTG+TGG | + | chr8_1:57685816-57685835 | None:intergenic | 55.0% | |
| CCCCATGAAACAGCCTCATC+TGG | + | chr8_1:57686138-57686157 | None:intergenic | 55.0% | |
| AGGTGTGGCTGGGATCTTGA+TGG | - | chr8_1:57686394-57686413 | Msa1203450:intron | 55.0% | |
| CGGAAGACCCTGAGTACCAG+TGG | - | chr8_1:57684032-57684051 | Msa1203450:intron | 60.0% | |
| ACTGGCAGTCCTGACAACCG+TGG | - | chr8_1:57685820-57685839 | Msa1203450:CDS | 60.0% | |
| TGGGGTTCGAACCCCAGCCA+CGG | - | chr8_1:57685160-57685179 | Msa1203450:intron | 65.0% | |
| TTACGTCGGACGCCGTGGCT+GGG | + | chr8_1:57685175-57685194 | None:intergenic | 65.0% | |
| TACGTCGGACGCCGTGGCTG+GGG | + | chr8_1:57685174-57685193 | None:intergenic | 70.0% | |
| GTTACGTCGGACGCCGTGGC+TGG | + | chr8_1:57685176-57685195 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 57682920 | 57686713 | 57682920 | ID=Msa1203450;Name=Msa1203450 |
| chr8_1 | mRNA | 57682920 | 57686713 | 57682920 | ID=Msa1203450-mRNA-1;Parent=Msa1203450;Name=Msa1203450-mRNA-1;_AED=0.11;_eAED=0.10;_QI=27|1|0.83|1|1|1|6|344|408 |
| chr8_1 | exon | 57682920 | 57683341 | 57682920 | ID=Msa1203450-mRNA-1:exon:18835;Parent=Msa1203450-mRNA-1 |
| chr8_1 | exon | 57683445 | 57683891 | 57683445 | ID=Msa1203450-mRNA-1:exon:18834;Parent=Msa1203450-mRNA-1 |
| chr8_1 | exon | 57684130 | 57684216 | 57684130 | ID=Msa1203450-mRNA-1:exon:18833;Parent=Msa1203450-mRNA-1 |
| chr8_1 | exon | 57685709 | 57685927 | 57685709 | ID=Msa1203450-mRNA-1:exon:18832;Parent=Msa1203450-mRNA-1 |
| chr8_1 | exon | 57686197 | 57686343 | 57686197 | ID=Msa1203450-mRNA-1:exon:18831;Parent=Msa1203450-mRNA-1 |
| chr8_1 | exon | 57686438 | 57686713 | 57686438 | ID=Msa1203450-mRNA-1:exon:18830;Parent=Msa1203450-mRNA-1 |
| chr8_1 | five_prime_UTR | 57686687 | 57686713 | 57686687 | ID=Msa1203450-mRNA-1:five_prime_utr;Parent=Msa1203450-mRNA-1 |
| chr8_1 | CDS | 57686438 | 57686686 | 57686438 | ID=Msa1203450-mRNA-1:cds;Parent=Msa1203450-mRNA-1 |
| chr8_1 | CDS | 57686197 | 57686343 | 57686197 | ID=Msa1203450-mRNA-1:cds;Parent=Msa1203450-mRNA-1 |
| chr8_1 | CDS | 57685709 | 57685927 | 57685709 | ID=Msa1203450-mRNA-1:cds;Parent=Msa1203450-mRNA-1 |
| chr8_1 | CDS | 57684130 | 57684216 | 57684130 | ID=Msa1203450-mRNA-1:cds;Parent=Msa1203450-mRNA-1 |
| chr8_1 | CDS | 57683445 | 57683891 | 57683445 | ID=Msa1203450-mRNA-1:cds;Parent=Msa1203450-mRNA-1 |
| chr8_1 | CDS | 57683264 | 57683341 | 57683264 | ID=Msa1203450-mRNA-1:cds;Parent=Msa1203450-mRNA-1 |
| chr8_1 | three_prime_UTR | 57682920 | 57683263 | 57682920 | ID=Msa1203450-mRNA-1:three_prime_utr;Parent=Msa1203450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
