Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132910 | XP_003611278.1 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 9.62e-128 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132910 | sp|Q9SUW2|APT3_ARATH | 83.425 | 181 | 30 | 0 | 3 | 183 | 2 | 182 | 1.17e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132910 | G7JW03 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 4.60e-128 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0754220 | Msa1132910 | 0.929436 | 6.965361e-93 | -8.615850e-47 |
| Msa0267330 | Msa1132910 | 0.910989 | 1.009274e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132910 | MtrunA17_Chr5g0399031 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 8.85e-132 | 367 |
| Msa1132910 | MtrunA17_Chr4g0056471 | 89.189 | 185 | 18 | 1 | 1 | 185 | 1 | 183 | 4.86e-116 | 327 |
| Msa1132910 | MtrunA17_Chr3g0134721 | 78.531 | 177 | 38 | 0 | 6 | 182 | 66 | 242 | 8.83e-101 | 290 |
| Msa1132910 | MtrunA17_Chr3g0137551 | 73.988 | 173 | 45 | 0 | 10 | 182 | 11 | 183 | 4.04e-90 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132910 | AT4G22570.1 | 83.425 | 181 | 30 | 0 | 3 | 183 | 2 | 182 | 1.19e-106 | 303 |
| Msa1132910 | AT4G12440.3 | 84.270 | 178 | 28 | 0 | 6 | 183 | 4 | 181 | 7.00e-106 | 301 |
| Msa1132910 | AT4G12440.2 | 84.270 | 178 | 28 | 0 | 6 | 183 | 4 | 181 | 7.00e-106 | 301 |
| Msa1132910 | AT1G27450.2 | 77.586 | 174 | 39 | 0 | 9 | 182 | 7 | 180 | 4.49e-96 | 276 |
| Msa1132910 | AT1G27450.4 | 77.586 | 174 | 39 | 0 | 9 | 182 | 7 | 180 | 4.49e-96 | 276 |
| Msa1132910 | AT1G27450.1 | 77.586 | 174 | 39 | 0 | 9 | 182 | 67 | 240 | 8.20e-96 | 278 |
| Msa1132910 | AT5G11160.1 | 77.457 | 173 | 39 | 0 | 10 | 182 | 11 | 183 | 1.46e-92 | 268 |
| Msa1132910 | AT1G80050.1 | 74.566 | 173 | 44 | 0 | 10 | 182 | 11 | 183 | 3.21e-92 | 267 |
| Msa1132910 | AT1G27450.3 | 67.839 | 199 | 39 | 1 | 9 | 182 | 83 | 281 | 1.80e-89 | 263 |
| Msa1132910 | AT1G80050.2 | 76.159 | 151 | 36 | 0 | 32 | 182 | 1 | 151 | 4.76e-81 | 238 |
| Msa1132910 | AT5G11160.2 | 77.536 | 138 | 31 | 0 | 10 | 147 | 11 | 148 | 2.53e-72 | 216 |
| Msa1132910 | AT4G22570.2 | 82.178 | 101 | 18 | 0 | 6 | 106 | 5 | 105 | 5.43e-55 | 170 |
| Msa1132910 | AT4G12440.1 | 88.172 | 93 | 11 | 0 | 6 | 98 | 4 | 96 | 2.13e-53 | 166 |
| Msa1132910 | AT4G12440.4 | 88.172 | 93 | 11 | 0 | 6 | 98 | 4 | 96 | 2.13e-53 | 166 |
Find 76 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCAGCTTTAGGGAAATT+AGG | 0.183357 | 7_3:-85764885 | None:intergenic |
| GCATTATTTACTATATTATA+TGG | 0.235159 | 7_3:+85769667 | Msa1132910:three_prime_UTR |
| CAAGAATATATTCTGGAATA+TGG | 0.262836 | 7_3:+85768211 | Msa1132910:CDS |
| ATACAATCAAATTATGGATT+TGG | 0.266097 | 7_3:+85769411 | Msa1132910:three_prime_UTR |
| CGTCCCATACAATCAAATTA+TGG | 0.278879 | 7_3:+85769405 | Msa1132910:three_prime_UTR |
| AAACAGAACAAACCAGCTTT+AGG | 0.286654 | 7_3:-85764894 | None:intergenic |
| AGTATACCAGGCAACTTCTT+TGG | 0.298599 | 7_3:-85767268 | None:intergenic |
| AATCGTGTCCTTAAAAGCTT+TGG | 0.304890 | 7_3:-85765108 | None:intergenic |
| TTTATAAGCCACCTCTAGTC+TGG | 0.325716 | 7_3:-85769611 | None:intergenic |
| TACAATCAAATTATGGATTT+GGG | 0.330287 | 7_3:+85769412 | Msa1132910:three_prime_UTR |
| CATACTACAAGCTAATTAGA+TGG | 0.343120 | 7_3:-85769471 | None:intergenic |
| ATATGAGCTGCTCGTGAATA+TGG | 0.346111 | 7_3:+85769380 | Msa1132910:exon |
| AAATCCATAATTTGATTGTA+TGG | 0.354557 | 7_3:-85769409 | None:intergenic |
| AACCAGCTTTAGGGAAATTA+GGG | 0.373142 | 7_3:-85764884 | None:intergenic |
| GCTCCTATTGCTAGGGCAAT+GGG | 0.388468 | 7_3:-85767223 | None:intergenic |
| AATTTGTATGACCCACCCTT+TGG | 0.390878 | 7_3:+85769515 | Msa1132910:three_prime_UTR |
| AGACATAACAACTTTGTTGC+TGG | 0.393391 | 7_3:+85765082 | Msa1132910:CDS |
| CGGGGATCCTGGTTATGGTT+AGG | 0.395044 | 7_3:-85764828 | None:intergenic |
| CCTCCCATTGCCCTAGCAAT+AGG | 0.399883 | 7_3:+85767220 | Msa1132910:CDS |
| TGAGTACAGAGAAGAGGAAG+AGG | 0.400474 | 7_3:-85764774 | None:intergenic |
| AACAGAACAAACCAGCTTTA+GGG | 0.408090 | 7_3:-85764893 | None:intergenic |
| AATACACATACCTTCAGTTC+TGG | 0.411464 | 7_3:-85768986 | None:intergenic |
| GTTGATGATTTGATTGCAAC+TGG | 0.419866 | 7_3:+85768292 | Msa1132910:CDS |
| ATCGTGTCCTTAAAAGCTTT+GGG | 0.421866 | 7_3:-85765107 | None:intergenic |
| TATATCTCAAGAATATATTC+TGG | 0.424805 | 7_3:+85768204 | Msa1132910:CDS |
| ATTTGTATGACCCACCCTTT+GGG | 0.430577 | 7_3:+85769516 | Msa1132910:three_prime_UTR |
| GCAACAAAGTTGTTATGTCT+TGG | 0.434670 | 7_3:-85765079 | None:intergenic |
| GGAGACGGGGATCCTGGTTA+TGG | 0.440718 | 7_3:-85764833 | None:intergenic |
| CAGGGTCGTGAACGTTTGAA+TGG | 0.446474 | 7_3:+85769323 | Msa1132910:intron |
| GTCCCTAATTTCCCTAAAGC+TGG | 0.449348 | 7_3:+85764882 | Msa1132910:CDS |
| GGAGCTTAATTTAGTGAAGA+AGG | 0.449747 | 7_3:+85769642 | Msa1132910:three_prime_UTR |
| TGCTCCTATTGCTAGGGCAA+TGG | 0.450009 | 7_3:-85767224 | None:intergenic |
| GGAATATGGAAGGGATTGTC+TGG | 0.452778 | 7_3:+85768225 | Msa1132910:CDS |
| ATTTGGGAGATGTCATTTAG+TGG | 0.454410 | 7_3:+85769428 | Msa1132910:three_prime_UTR |
| GAGGAAGAGGAGAAAGAAAG+TGG | 0.458352 | 7_3:-85764761 | None:intergenic |
| TGCCATGGAGACGGGGATCC+TGG | 0.460160 | 7_3:-85764839 | None:intergenic |
| ACGTGTCGGAGCAGAGGTAG+TGG | 0.480614 | 7_3:+85768940 | Msa1132910:CDS |
| CAAACTTTGCTCCTATTGCT+AGG | 0.482941 | 7_3:-85767231 | None:intergenic |
| GTGAGTTGAGTACAGAGAAG+AGG | 0.493402 | 7_3:-85764780 | None:intergenic |
| TGGAACGCTCGGTGCAGCTA+TGG | 0.495730 | 7_3:+85768315 | Msa1132910:CDS |
| AATCCATAATTTGATTGTAT+GGG | 0.503655 | 7_3:-85769408 | None:intergenic |
| GGGGATCCTGGTTATGGTTA+GGG | 0.510107 | 7_3:-85764827 | None:intergenic |
| AACTTCTTTGGTTTCCTCAA+CGG | 0.516612 | 7_3:-85767256 | None:intergenic |
| TTTGTTTGTTGAGCGTTACA+AGG | 0.520818 | 7_3:+85765133 | Msa1132910:CDS |
| AGGAAGAGGAGAAAGAAAGT+GGG | 0.531412 | 7_3:-85764760 | None:intergenic |
| AGGAAACCAAAGAAGTTGCC+TGG | 0.536887 | 7_3:+85767262 | Msa1132910:CDS |
| CATGTTGGAGCTGTTGAAGC+TGG | 0.538546 | 7_3:+85768253 | Msa1132910:CDS |
| AATATATTCTGGAATATGGA+AGG | 0.538905 | 7_3:+85768215 | Msa1132910:CDS |
| GGTGCAGCTATGGATTTACT+TGG | 0.542272 | 7_3:+85768325 | Msa1132910:CDS |
| AACCAGGATCCCCGTCTCCA+TGG | 0.548404 | 7_3:+85764837 | Msa1132910:CDS |
| ATTGCAACTGGTGGAACGCT+CGG | 0.559268 | 7_3:+85768304 | Msa1132910:CDS |
| AGGGTCGTGAACGTTTGAAT+GGG | 0.559366 | 7_3:+85769324 | Msa1132910:intron |
| AAACTTTGCTCCTATTGCTA+GGG | 0.561475 | 7_3:-85767230 | None:intergenic |
| GAAGCCGTTGTACGTGTTGG+TGG | 0.568047 | 7_3:+85769346 | Msa1132910:CDS |
| ATACTACAAGCTAATTAGAT+GGG | 0.571753 | 7_3:-85769470 | None:intergenic |
| ATGAGACGAGAGAGACCCAA+AGG | 0.574212 | 7_3:-85769531 | None:intergenic |
| TTATAAGCCACCTCTAGTCT+GGG | 0.578321 | 7_3:-85769610 | None:intergenic |
| AACTGGGCCCAGACTAGAGG+TGG | 0.593639 | 7_3:+85769603 | Msa1132910:three_prime_UTR |
| TTATTTACTATATTATATGG+TGG | 0.594062 | 7_3:+85769670 | Msa1132910:three_prime_UTR |
| GACGAGAGAGACCCAAAGGG+TGG | 0.599552 | 7_3:-85769527 | None:intergenic |
| GAAAACTGGGCCCAGACTAG+AGG | 0.599698 | 7_3:+85769600 | Msa1132910:three_prime_UTR |
| GAGCAAAGTTTGTACCGTTG+AGG | 0.600941 | 7_3:+85767242 | Msa1132910:CDS |
| TTGTTTGTTGAGCGTTACAA+GGG | 0.608001 | 7_3:+85765134 | Msa1132910:CDS |
| ATATATTCTGGAATATGGAA+GGG | 0.616454 | 7_3:+85768216 | Msa1132910:CDS |
| AATTGAATTACCAGAACTGA+AGG | 0.617672 | 7_3:+85768976 | Msa1132910:CDS |
| TCTTTAGGAATCGAAGCTCG+AGG | 0.622592 | 7_3:+85767184 | Msa1132910:intron |
| GATGATTTGATTGCAACTGG+TGG | 0.623926 | 7_3:+85768295 | Msa1132910:CDS |
| GATTGTCTGGAGATGCATGT+TGG | 0.625993 | 7_3:+85768238 | Msa1132910:CDS |
| TTTAGAACGTGTCGGAGCAG+AGG | 0.626121 | 7_3:+85768934 | Msa1132910:intron |
| TGAGACGAGAGAGACCCAAA+GGG | 0.626189 | 7_3:-85769530 | None:intergenic |
| TGGGAAGCCGTTGTACGTGT+TGG | 0.631023 | 7_3:+85769343 | Msa1132910:CDS |
| TATTCCACCAACACGTACAA+CGG | 0.631070 | 7_3:-85769350 | None:intergenic |
| ACGAGAGAGACCCAAAGGGT+GGG | 0.632924 | 7_3:-85769526 | None:intergenic |
| AGCTGGTGAACGTGCTATTG+TGG | 0.633448 | 7_3:+85768270 | Msa1132910:CDS |
| GTCTTACCCTAACCATAACC+AGG | 0.656381 | 7_3:+85764821 | Msa1132910:CDS |
| CCTATTGCTAGGGCAATGGG+AGG | 0.682237 | 7_3:-85767220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATATGAATCAAA+GGG | - | chr7_3:85764958-85764977 | None:intergenic | 10.0% |
| !! | AAAAATAAAATATGAATCAA+AGG | - | chr7_3:85764959-85764978 | None:intergenic | 10.0% |
| !!! | ATATTTTTTAACTGAAAAAA+TGG | + | chr7_3:85765197-85765216 | Msa1132910:intron | 10.0% |
| !!! | TTTTATTTTGCATATATTTT+TGG | - | chr7_3:85765368-85765387 | None:intergenic | 10.0% |
| !!! | ATTATAATATAATAATGGAA+GGG | - | chr7_3:85765806-85765825 | None:intergenic | 10.0% |
| !!! | AATTATAATATAATAATGGA+AGG | - | chr7_3:85765807-85765826 | None:intergenic | 10.0% |
| !! | CACAAATTATAATATAATAA+TGG | - | chr7_3:85765811-85765830 | None:intergenic | 10.0% |
| !! | CATTATTATATTATAATTTG+TGG | + | chr7_3:85765809-85765828 | Msa1132910:intron | 10.0% |
| !!! | TTTGTACTATTTTTATTATT+TGG | + | chr7_3:85765949-85765968 | Msa1132910:intron | 10.0% |
| !!! | AAATTTTATTAGAAAAATGA+GGG | - | chr7_3:85769564-85769583 | None:intergenic | 10.0% |
| !!! | TAAATTTTATTAGAAAAATG+AGG | - | chr7_3:85769565-85769584 | None:intergenic | 10.0% |
| !! | AAATAAAATATGAATCAAAG+GGG | - | chr7_3:85764957-85764976 | None:intergenic | 15.0% |
| !! | ATTTAATTGTTTATCAAATC+AGG | + | chr7_3:85766717-85766736 | Msa1132910:intron | 15.0% |
| !! | TTTCCATTGAAATATATAAA+TGG | - | chr7_3:85766944-85766963 | None:intergenic | 15.0% |
| !!! | ATTACGTATAAATAATTTGT+AGG | - | chr7_3:85767772-85767791 | None:intergenic | 15.0% |
| !!! | TAAAACAATTCATATGATTT+TGG | - | chr7_3:85767859-85767878 | None:intergenic | 15.0% |
| !! | TTTGTTACTATAAAGAAAAT+GGG | - | chr7_3:85768163-85768182 | None:intergenic | 15.0% |
| !!! | TTTTGTTACTATAAAGAAAA+TGG | - | chr7_3:85768164-85768183 | None:intergenic | 15.0% |
| !! | TTATTAAAAGTTTCTCAATT+AGG | - | chr7_3:85768551-85768570 | None:intergenic | 15.0% |
| !!! | GTTTGAAATATTAAAAGAAT+CGG | + | chr7_3:85768583-85768602 | Msa1132910:intron | 15.0% |
| !! | TTAAAAACTGCATTTAAATT+TGG | - | chr7_3:85768706-85768725 | None:intergenic | 15.0% |
| !! | AAAAGACATCAATATAATAA+AGG | - | chr7_3:85768916-85768935 | None:intergenic | 15.0% |
| !! | GCATTATTTACTATATTATA+TGG | + | chr7_3:85769667-85769686 | Msa1132910:three_prime_UTR | 15.0% |
| !! | TTATTTACTATATTATATGG+TGG | + | chr7_3:85769670-85769689 | Msa1132910:three_prime_UTR | 15.0% |
| !!! | AAGCTTTATTTTTTGTTTTG+AGG | + | chr7_3:85764988-85765007 | Msa1132910:intron | 20.0% |
| !!! | TTATTTATTTTGTTTGAACG+TGG | + | chr7_3:85765239-85765258 | Msa1132910:intron | 20.0% |
| !!! | TATTTATTTTGTTTGAACGT+GGG | + | chr7_3:85765240-85765259 | Msa1132910:intron | 20.0% |
| !! | AAAAGAGATTCAAATAAACA+CGG | - | chr7_3:85766361-85766380 | None:intergenic | 20.0% |
| !! | GTACCATTTATATATTTCAA+TGG | + | chr7_3:85766938-85766957 | Msa1132910:intron | 20.0% |
| !! | GTAGAACATTTAAACTTAAT+TGG | - | chr7_3:85767394-85767413 | None:intergenic | 20.0% |
| !!! | ATAACTTTTGTTCAAAATTC+AGG | - | chr7_3:85767830-85767849 | None:intergenic | 20.0% |
| !! | TTGTTCAGAAACTAATTTAA+CGG | + | chr7_3:85767908-85767927 | Msa1132910:intron | 20.0% |
| !! | TTATTTGTTTATCAGTTATG+TGG | + | chr7_3:85768012-85768031 | Msa1132910:intron | 20.0% |
| !! | TATATCTCAAGAATATATTC+TGG | + | chr7_3:85768204-85768223 | Msa1132910:CDS | 20.0% |
| !!! | TTTAGAGTAAACCATTAAAT+TGG | - | chr7_3:85768637-85768656 | None:intergenic | 20.0% |
| !! | TAACATGTAAATTTCAAACT+CGG | - | chr7_3:85768753-85768772 | None:intergenic | 20.0% |
| !!! | TTTTAACTATATTGATGTCT+TGG | + | chr7_3:85768847-85768866 | Msa1132910:intron | 20.0% |
| !! | AATCCATAATTTGATTGTAT+GGG | - | chr7_3:85769411-85769430 | None:intergenic | 20.0% |
| !! | AAATCCATAATTTGATTGTA+TGG | - | chr7_3:85769412-85769431 | None:intergenic | 20.0% |
| !! | ATACAATCAAATTATGGATT+TGG | + | chr7_3:85769411-85769430 | Msa1132910:three_prime_UTR | 20.0% |
| !! | TACAATCAAATTATGGATTT+GGG | + | chr7_3:85769412-85769431 | Msa1132910:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTGTTGCAATGAC+AGG | + | chr7_3:85765047-85765066 | Msa1132910:intron | 25.0% |
| !! | AAAAATATTTCTGTTGTTGC+AGG | + | chr7_3:85765158-85765177 | Msa1132910:CDS | 25.0% |
| ! | AAACTTGACAAAACAATCAA+TGG | - | chr7_3:85765652-85765671 | None:intergenic | 25.0% |
| ! | AAATAGTACAAAGAACGAAA+GGG | - | chr7_3:85765941-85765960 | None:intergenic | 25.0% |
| ! | AAAATAGTACAAAGAACGAA+AGG | - | chr7_3:85765942-85765961 | None:intergenic | 25.0% |
| ! | AAAATGAACAAGAACACTAT+TGG | + | chr7_3:85765972-85765991 | Msa1132910:intron | 25.0% |
| ! | TACTATGCTCATAGTTATTT+GGG | + | chr7_3:85766049-85766068 | Msa1132910:intron | 25.0% |
| ! | ATTATAGACTCCAATATTAG+AGG | + | chr7_3:85766138-85766157 | Msa1132910:intron | 25.0% |
| ! | AATTGACTATTGATACAATG+AGG | + | chr7_3:85766201-85766220 | Msa1132910:intron | 25.0% |
| ! | GTTTGTAAGAATCATGAAAA+AGG | + | chr7_3:85766250-85766269 | Msa1132910:intron | 25.0% |
| !! | TGGACTATTTCTTTAATGTT+TGG | + | chr7_3:85766425-85766444 | Msa1132910:intron | 25.0% |
| ! | TGAGTTTATCTAGTTACATA+AGG | + | chr7_3:85766484-85766503 | Msa1132910:intron | 25.0% |
| ! | ATCATAAACACTTATACGAT+AGG | + | chr7_3:85766673-85766692 | Msa1132910:intron | 25.0% |
| ! | GAAATTGTGAATAATGTATG+AGG | + | chr7_3:85766757-85766776 | Msa1132910:intron | 25.0% |
| ! | CGTAGATTAAAAATTAGCAA+TGG | - | chr7_3:85766800-85766819 | None:intergenic | 25.0% |
| !! | ATAATCTTAGTGCTATTGTA+TGG | + | chr7_3:85766857-85766876 | Msa1132910:intron | 25.0% |
| !! | TTGTATGGTAGTAGATATTT+TGG | + | chr7_3:85766872-85766891 | Msa1132910:intron | 25.0% |
| ! | ATTTCAATGGAAAACAATGA+AGG | + | chr7_3:85766951-85766970 | Msa1132910:intron | 25.0% |
| ! | AAGATTTAGAAATCCTCTAT+TGG | + | chr7_3:85766981-85767000 | Msa1132910:intron | 25.0% |
| ! | TTACTACTTTATAAACATGG+AGG | - | chr7_3:85767056-85767075 | None:intergenic | 25.0% |
| !! | GTGTTACTACTTTATAAACA+TGG | - | chr7_3:85767059-85767078 | None:intergenic | 25.0% |
| ! | TCTTCTCTTCTTTATTCTTT+AGG | + | chr7_3:85767169-85767188 | Msa1132910:intron | 25.0% |
| ! | CATTTAAACTTAATTGGTAG+AGG | - | chr7_3:85767388-85767407 | None:intergenic | 25.0% |
| ! | AAATAGTGAAGAATCAATTG+AGG | - | chr7_3:85767449-85767468 | None:intergenic | 25.0% |
| !! | ATTGATTCTTCACTATTTCA+TGG | + | chr7_3:85767451-85767470 | Msa1132910:intron | 25.0% |
| ! | AATAAATTGCACATTTGCAT+AGG | - | chr7_3:85767500-85767519 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTCATAAACTGC+TGG | - | chr7_3:85767798-85767817 | None:intergenic | 25.0% |
| !!! | CAAGAATATATTCTGGAATA+TGG | + | chr7_3:85768211-85768230 | Msa1132910:CDS | 25.0% |
| !!! | AATATATTCTGGAATATGGA+AGG | + | chr7_3:85768215-85768234 | Msa1132910:CDS | 25.0% |
| !!! | ATATATTCTGGAATATGGAA+GGG | + | chr7_3:85768216-85768235 | Msa1132910:CDS | 25.0% |
| ! | TCTATATGTTCAGATGAAAT+CGG | + | chr7_3:85768381-85768400 | Msa1132910:intron | 25.0% |
| !!! | CTCAAAAGTTTTTAACTGTA+GGG | - | chr7_3:85768410-85768429 | None:intergenic | 25.0% |
| !!! | ACTCAAAAGTTTTTAACTGT+AGG | - | chr7_3:85768411-85768430 | None:intergenic | 25.0% |
| !! | ATTAGGTCTGTTTTATGTTT+TGG | - | chr7_3:85768534-85768553 | None:intergenic | 25.0% |
| ! | TCGGATACTAATATGAAAAT+AGG | + | chr7_3:85768602-85768621 | Msa1132910:intron | 25.0% |
| !! | TGGTTTACTCTAAAAAATCT+AGG | + | chr7_3:85768643-85768662 | Msa1132910:intron | 25.0% |
| ! | GCTTAATATAAAGATGAAAC+AGG | - | chr7_3:85768805-85768824 | None:intergenic | 25.0% |
| !! | AGTCAATATTGTTATTGATC+AGG | + | chr7_3:85769155-85769174 | Msa1132910:intron | 25.0% |
| ! | ATACTACAAGCTAATTAGAT+GGG | - | chr7_3:85769473-85769492 | None:intergenic | 25.0% |
| ! | ACATGACAAAAATGAAAACT+GGG | + | chr7_3:85769587-85769606 | Msa1132910:three_prime_UTR | 25.0% |
| CATCACTATTGTTATCTTGA+AGG | + | chr7_3:85765272-85765291 | Msa1132910:intron | 30.0% | |
| !! | TTTTGAGAGACATTATGCAA+TGG | + | chr7_3:85765554-85765573 | Msa1132910:intron | 30.0% |
| CTATAAGCTCTTGTAATTTG+TGG | + | chr7_3:85765613-85765632 | Msa1132910:intron | 30.0% | |
| ! | TCTTGTAATTTGTGGTTAGT+GGG | + | chr7_3:85765621-85765640 | Msa1132910:intron | 30.0% |
| ! | TTTTGTCAAGTTTTCTTCAG+CGG | + | chr7_3:85765659-85765678 | Msa1132910:intron | 30.0% |
| TGGAATCAATTTATCACCAA+TGG | - | chr7_3:85765721-85765740 | None:intergenic | 30.0% | |
| ATACAACTATGCATCTTGTT+TGG | + | chr7_3:85765907-85765926 | Msa1132910:intron | 30.0% | |
| AATAGTACAAAGAACGAAAG+GGG | - | chr7_3:85765940-85765959 | None:intergenic | 30.0% | |
| GTACTATGCTCATAGTTATT+TGG | + | chr7_3:85766048-85766067 | Msa1132910:intron | 30.0% | |
| ! | TTTCTTTTGTTAGACATACC+CGG | + | chr7_3:85766102-85766121 | Msa1132910:intron | 30.0% |
| TATAATTGAAGAGAAGCTTC+CGG | - | chr7_3:85766124-85766143 | None:intergenic | 30.0% | |
| ACAAATTCCTCCTCTAATAT+TGG | - | chr7_3:85766151-85766170 | None:intergenic | 30.0% | |
| ! | CTATTGCATTTTTAATGCGT+TGG | + | chr7_3:85766307-85766326 | Msa1132910:intron | 30.0% |
| !! | TTAATGCGTTGGTATTGTTT+TGG | + | chr7_3:85766318-85766337 | Msa1132910:intron | 30.0% |
| ! | TTTGAATCTCTTTTAGCATG+TGG | + | chr7_3:85766367-85766386 | Msa1132910:intron | 30.0% |
| TTGTTTATCAAATCAGGTCT+TGG | + | chr7_3:85766723-85766742 | Msa1132910:intron | 30.0% | |
| AAAAATTAGCAATGGCAATG+AGG | - | chr7_3:85766792-85766811 | None:intergenic | 30.0% | |
| CTTTATAAACATGGAGGAAA+GGG | - | chr7_3:85767050-85767069 | None:intergenic | 30.0% | |
| ACTTTATAAACATGGAGGAA+AGG | - | chr7_3:85767051-85767070 | None:intergenic | 30.0% | |
| TAACACACTAGTATTATCCA+TGG | + | chr7_3:85767073-85767092 | Msa1132910:intron | 30.0% | |
| GTGCAATTTATTTGTGAGAA+TGG | + | chr7_3:85767508-85767527 | Msa1132910:intron | 30.0% | |
| CGAAGATTGAAACACAAATA+AGG | - | chr7_3:85767548-85767567 | None:intergenic | 30.0% | |
| ! | ATAAATCAAGTTTTGCGCAT+TGG | - | chr7_3:85767622-85767641 | None:intergenic | 30.0% |
| ! | TACTATCTGCTTTCAACTTT+TGG | + | chr7_3:85767957-85767976 | Msa1132910:intron | 30.0% |
| ACTTTGATCAAGATCATTGT+TGG | + | chr7_3:85768051-85768070 | Msa1132910:intron | 30.0% | |
| TAGATTGTTGAGGTGTAATA+AGG | - | chr7_3:85768365-85768384 | None:intergenic | 30.0% | |
| TCTGAACATATAGATTGTTG+AGG | - | chr7_3:85768375-85768394 | None:intergenic | 30.0% | |
| !! | TTTTGAGTAAACCACCAAAT+TGG | + | chr7_3:85768423-85768442 | Msa1132910:intron | 30.0% |
| TTCAAGACTAATTTCAGAGA+TGG | - | chr7_3:85768449-85768468 | None:intergenic | 30.0% | |
| AACAACTACATTTGTGCTAA+AGG | - | chr7_3:85768669-85768688 | None:intergenic | 30.0% | |
| TTTAGCACAAATGTAGTTGT+TGG | + | chr7_3:85768668-85768687 | Msa1132910:intron | 30.0% | |
| TTCCTATTTGTCTGACTATA+TGG | + | chr7_3:85768886-85768905 | Msa1132910:intron | 30.0% | |
| ATCCATATAGTCAGACAAAT+AGG | - | chr7_3:85768891-85768910 | None:intergenic | 30.0% | |
| AATTGAATTACCAGAACTGA+AGG | + | chr7_3:85768976-85768995 | Msa1132910:CDS | 30.0% | |
| ! | CAATATTGACTAGAAACACA+TGG | - | chr7_3:85769146-85769165 | None:intergenic | 30.0% |
| !! | GAAAGTCATTTTCATTACAC+AGG | - | chr7_3:85769218-85769237 | None:intergenic | 30.0% |
| CATACTACAAGCTAATTAGA+TGG | - | chr7_3:85769474-85769493 | None:intergenic | 30.0% | |
| GACATGACAAAAATGAAAAC+TGG | + | chr7_3:85769586-85769605 | Msa1132910:three_prime_UTR | 30.0% | |
| !!! | GAATCTTAGTTTTGATGCCA+TGG | - | chr7_3:85764857-85764876 | None:intergenic | 35.0% |
| !! | AACCAGCTTTAGGGAAATTA+GGG | - | chr7_3:85764887-85764906 | None:intergenic | 35.0% |
| !! | AAACCAGCTTTAGGGAAATT+AGG | - | chr7_3:85764888-85764907 | None:intergenic | 35.0% |
| AACAGAACAAACCAGCTTTA+GGG | - | chr7_3:85764896-85764915 | None:intergenic | 35.0% | |
| AAACAGAACAAACCAGCTTT+AGG | - | chr7_3:85764897-85764916 | None:intergenic | 35.0% | |
| GCAACAAAGTTGTTATGTCT+TGG | - | chr7_3:85765082-85765101 | None:intergenic | 35.0% | |
| AGACATAACAACTTTGTTGC+TGG | + | chr7_3:85765082-85765101 | Msa1132910:CDS | 35.0% | |
| ATCGTGTCCTTAAAAGCTTT+GGG | - | chr7_3:85765110-85765129 | None:intergenic | 35.0% | |
| AATCGTGTCCTTAAAAGCTT+TGG | - | chr7_3:85765111-85765130 | None:intergenic | 35.0% | |
| ! | TTTGTTTGTTGAGCGTTACA+AGG | + | chr7_3:85765133-85765152 | Msa1132910:CDS | 35.0% |
| ! | TTGTTTGTTGAGCGTTACAA+GGG | + | chr7_3:85765134-85765153 | Msa1132910:CDS | 35.0% |
| CACTATTGTTATCTTGAAGG+TGG | + | chr7_3:85765275-85765294 | Msa1132910:intron | 35.0% | |
| ATTGTTATCTTGAAGGTGGT+AGG | + | chr7_3:85765279-85765298 | Msa1132910:intron | 35.0% | |
| TTGTTATCTTGAAGGTGGTA+GGG | + | chr7_3:85765280-85765299 | Msa1132910:intron | 35.0% | |
| !! | AGTGCGTAAATTTTAGTCTC+TGG | + | chr7_3:85765477-85765496 | Msa1132910:intron | 35.0% |
| ! | CTCTTGTAATTTGTGGTTAG+TGG | + | chr7_3:85765620-85765639 | Msa1132910:intron | 35.0% |
| TGTTTCTTGTGGATCCAATT+AGG | + | chr7_3:85765686-85765705 | Msa1132910:intron | 35.0% | |
| TGATTCCAACTTGTGTAATG+TGG | + | chr7_3:85765733-85765752 | Msa1132910:intron | 35.0% | |
| GTCACACTATAGTGAAATGT+AGG | - | chr7_3:85765838-85765857 | None:intergenic | 35.0% | |
| ATAGTACAAAGAACGAAAGG+GGG | - | chr7_3:85765939-85765958 | None:intergenic | 35.0% | |
| AATCCTAATGCACACACAAA+AGG | - | chr7_3:85766019-85766038 | None:intergenic | 35.0% | |
| TATGCTCATAGTTATTTGGG+TGG | + | chr7_3:85766052-85766071 | Msa1132910:intron | 35.0% | |
| ATGCTCATAGTTATTTGGGT+GGG | + | chr7_3:85766053-85766072 | Msa1132910:intron | 35.0% | |
| ATAATTGAAGAGAAGCTTCC+GGG | - | chr7_3:85766123-85766142 | None:intergenic | 35.0% | |
| ATAGACTCCAATATTAGAGG+AGG | + | chr7_3:85766141-85766160 | Msa1132910:intron | 35.0% | |
| !!! | GTTGGTATTGTTTTGGACTT+TGG | + | chr7_3:85766325-85766344 | Msa1132910:intron | 35.0% |
| !!! | AGCTTGCATTAGTTTTAGCA+TGG | + | chr7_3:85766405-85766424 | Msa1132910:intron | 35.0% |
| AGAAGTGAAAATGAGTACAC+CGG | - | chr7_3:85766830-85766849 | None:intergenic | 35.0% | |
| TCAGTTTCTTACTTCCATGT+TGG | + | chr7_3:85766895-85766914 | Msa1132910:intron | 35.0% | |
| TTCAGAGTTAGTAACCAACA+TGG | - | chr7_3:85766912-85766931 | None:intergenic | 35.0% | |
| TTTCTACTTGCTTCCAATAG+AGG | - | chr7_3:85766997-85767016 | None:intergenic | 35.0% | |
| CTATTGGAAGCAAGTAGAAA+CGG | + | chr7_3:85766997-85767016 | Msa1132910:intron | 35.0% | |
| AAGTGATATTCAAAACCAGC+AGG | - | chr7_3:85767110-85767129 | None:intergenic | 35.0% | |
| TATTGTCAAACCATGTGTTG+CGG | + | chr7_3:85767134-85767153 | Msa1132910:intron | 35.0% | |
| AAACTTTGCTCCTATTGCTA+GGG | - | chr7_3:85767233-85767252 | None:intergenic | 35.0% | |
| ! | AACTTCTTTGGTTTCCTCAA+CGG | - | chr7_3:85767259-85767278 | None:intergenic | 35.0% |
| CATGATGTTCAAAGTATACC+AGG | - | chr7_3:85767283-85767302 | None:intergenic | 35.0% | |
| ! | AAGTGTGTTTTTCGCTGAAA+TGG | + | chr7_3:85767663-85767682 | Msa1132910:intron | 35.0% |
| ! | AGTGTGTTTTTCGCTGAAAT+GGG | + | chr7_3:85767664-85767683 | Msa1132910:intron | 35.0% |
| TGAACTCTCTGTATATCAAG+AGG | - | chr7_3:85767713-85767732 | None:intergenic | 35.0% | |
| TGGTAACAAAATCTTGTGTC+AGG | + | chr7_3:85768108-85768127 | Msa1132910:intron | 35.0% | |
| GTAACAAAATCTTGTGTGTC+AGG | + | chr7_3:85768175-85768194 | Msa1132910:intron | 35.0% | |
| !! | GTTGATGATTTGATTGCAAC+TGG | + | chr7_3:85768292-85768311 | Msa1132910:CDS | 35.0% |
| ! | GATTTACTTGGTGAGAAAAG+TGG | + | chr7_3:85768337-85768356 | Msa1132910:intron | 35.0% |
| AATTTCAGAGATGGCCAATT+TGG | - | chr7_3:85768440-85768459 | None:intergenic | 35.0% | |
| !!! | ATGTTTTGGTCACATGACTA+GGG | - | chr7_3:85768520-85768539 | None:intergenic | 35.0% |
| !!! | TATGTTTTGGTCACATGACT+AGG | - | chr7_3:85768521-85768540 | None:intergenic | 35.0% |
| GGTTACAGAGACCAATTTAA+TGG | + | chr7_3:85768623-85768642 | Msa1132910:intron | 35.0% | |
| !!! | GATGTCTTTTTAGAACGTGT+CGG | + | chr7_3:85768926-85768945 | Msa1132910:intron | 35.0% |
| AATACACATACCTTCAGTTC+TGG | - | chr7_3:85768989-85769008 | None:intergenic | 35.0% | |
| GACTAGAAACACATGGATTT+CGG | - | chr7_3:85769139-85769158 | None:intergenic | 35.0% | |
| CGTCCCATACAATCAAATTA+TGG | + | chr7_3:85769405-85769424 | Msa1132910:three_prime_UTR | 35.0% | |
| ! | ATTTGGGAGATGTCATTTAG+TGG | + | chr7_3:85769428-85769447 | Msa1132910:three_prime_UTR | 35.0% |
| ! | GGTGGCTTATAAATTTTGCA+TGG | + | chr7_3:85769621-85769640 | Msa1132910:three_prime_UTR | 35.0% |
| GGAGCTTAATTTAGTGAAGA+AGG | + | chr7_3:85769642-85769661 | Msa1132910:three_prime_UTR | 35.0% | |
| !!! | TAGTTTTGATGCCATGGAGA+CGG | - | chr7_3:85764851-85764870 | None:intergenic | 40.0% |
| TGTTATCTTGAAGGTGGTAG+GGG | + | chr7_3:85765281-85765300 | Msa1132910:intron | 40.0% | |
| TCCATGGCTACAAGAAAGTT+GGG | + | chr7_3:85765304-85765323 | Msa1132910:intron | 40.0% | |
| ! | TGTAATTTGTGGTTAGTGGG+TGG | + | chr7_3:85765624-85765643 | Msa1132910:intron | 40.0% |
| AATGGTTCTCCATGCCTAAT+TGG | - | chr7_3:85765703-85765722 | None:intergenic | 40.0% | |
| AATTAGGCATGGAGAACCAT+TGG | + | chr7_3:85765702-85765721 | Msa1132910:intron | 40.0% | |
| AGTTGGAACATGCGTTAAGT+GGG | - | chr7_3:85765760-85765779 | None:intergenic | 40.0% | |
| !! | GACACTGTCACTTTAAGTAC+TGG | + | chr7_3:85765855-85765874 | Msa1132910:intron | 40.0% |
| ! | TGTCCTTTTGTGTGTGCATT+AGG | + | chr7_3:85766013-85766032 | Msa1132910:intron | 40.0% |
| TGCTCATAGTTATTTGGGTG+GGG | + | chr7_3:85766054-85766073 | Msa1132910:intron | 40.0% | |
| ATGTTTGGATCCCATCATTC+AGG | + | chr7_3:85766440-85766459 | Msa1132910:intron | 40.0% | |
| CCAAACTAAGCCTGAATGAT+GGG | - | chr7_3:85766453-85766472 | None:intergenic | 40.0% | |
| TCCAAACTAAGCCTGAATGA+TGG | - | chr7_3:85766454-85766473 | None:intergenic | 40.0% | |
| ! | AAGCAAACACAGAGAGCATA+TGG | - | chr7_3:85766582-85766601 | None:intergenic | 40.0% |
| ! | TTTTAATCTACGTCCCCTAC+CGG | + | chr7_3:85766808-85766827 | Msa1132910:intron | 40.0% |
| TGAAAATGAGTACACCGGTA+GGG | - | chr7_3:85766825-85766844 | None:intergenic | 40.0% | |
| AGCAGGAAATGAAGAAACCA+TGG | - | chr7_3:85767093-85767112 | None:intergenic | 40.0% | |
| ATGGTTTCTTCATTTCCTGC+TGG | + | chr7_3:85767092-85767111 | Msa1132910:intron | 40.0% | |
| AATTAGTTCACCGCAACACA+TGG | - | chr7_3:85767147-85767166 | None:intergenic | 40.0% | |
| ! | GAAGCTCGAGGTTTCATTTT+TGG | + | chr7_3:85767196-85767215 | Msa1132910:CDS | 40.0% |
| CAAACTTTGCTCCTATTGCT+AGG | - | chr7_3:85767234-85767253 | None:intergenic | 40.0% | |
| AGTATACCAGGCAACTTCTT+TGG | - | chr7_3:85767271-85767290 | None:intergenic | 40.0% | |
| ATAGTGTGATGCAAGTGAAG+AGG | - | chr7_3:85767318-85767337 | None:intergenic | 40.0% | |
| GAGGAAGAAAACACACATAG+TGG | - | chr7_3:85767369-85767388 | None:intergenic | 40.0% | |
| ATTTGTGAGAATGGTTCTCG+AGG | + | chr7_3:85767517-85767536 | Msa1132910:intron | 40.0% | |
| TATTCCTTGTGTTTGTGCCT+TGG | + | chr7_3:85767639-85767658 | Msa1132910:intron | 40.0% | |
| AGCGAAAAACACACTTTCCA+AGG | - | chr7_3:85767659-85767678 | None:intergenic | 40.0% | |
| !! | TCAGTTATGTGGCTTTGTCA+TGG | + | chr7_3:85768023-85768042 | Msa1132910:intron | 40.0% |
| GTGTGTCAGACAAAATCTTG+TGG | + | chr7_3:85768088-85768107 | Msa1132910:intron | 40.0% | |
| GATGATTTGATTGCAACTGG+TGG | + | chr7_3:85768295-85768314 | Msa1132910:CDS | 40.0% | |
| TATTCCACCAACACGTACAA+CGG | - | chr7_3:85769353-85769372 | None:intergenic | 40.0% | |
| ATATGAGCTGCTCGTGAATA+TGG | + | chr7_3:85769380-85769399 | Msa1132910:exon | 40.0% | |
| AATTTGTATGACCCACCCTT+TGG | + | chr7_3:85769515-85769534 | Msa1132910:three_prime_UTR | 40.0% | |
| ATTTGTATGACCCACCCTTT+GGG | + | chr7_3:85769516-85769535 | Msa1132910:three_prime_UTR | 40.0% | |
| TTATAAGCCACCTCTAGTCT+GGG | - | chr7_3:85769613-85769632 | None:intergenic | 40.0% | |
| TTTATAAGCCACCTCTAGTC+TGG | - | chr7_3:85769614-85769633 | None:intergenic | 40.0% | |
| TGAGTACAGAGAAGAGGAAG+AGG | - | chr7_3:85764777-85764796 | None:intergenic | 45.0% | |
| ! | GTGAGTTGAGTACAGAGAAG+AGG | - | chr7_3:85764783-85764802 | None:intergenic | 45.0% |
| GTCTTACCCTAACCATAACC+AGG | + | chr7_3:85764821-85764840 | Msa1132910:CDS | 45.0% | |
| !! | AGTTTTGATGCCATGGAGAC+GGG | - | chr7_3:85764850-85764869 | None:intergenic | 45.0% |
| GTCCCTAATTTCCCTAAAGC+TGG | + | chr7_3:85764882-85764901 | Msa1132910:CDS | 45.0% | |
| ! | GCTGGATCCCAAAGCTTTTA+AGG | + | chr7_3:85765100-85765119 | Msa1132910:CDS | 45.0% |
| GTCCATGGCTACAAGAAAGT+TGG | + | chr7_3:85765303-85765322 | Msa1132910:intron | 45.0% | |
| ACCCAACTTTCTTGTAGCCA+TGG | - | chr7_3:85765308-85765327 | None:intergenic | 45.0% | |
| TGGCTACAAGAAAGTTGGGT+AGG | + | chr7_3:85765308-85765327 | Msa1132910:intron | 45.0% | |
| ! | TCAGCGGTTCTTGTTTCTTG+TGG | + | chr7_3:85765675-85765694 | Msa1132910:intron | 45.0% |
| CTTGTGGATCCAATTAGGCA+TGG | + | chr7_3:85765691-85765710 | Msa1132910:intron | 45.0% | |
| TGGGTCCACATTACACAAGT+TGG | - | chr7_3:85765741-85765760 | None:intergenic | 45.0% | |
| GAGTTGGAACATGCGTTAAG+TGG | - | chr7_3:85765761-85765780 | None:intergenic | 45.0% | |
| TAACGCATGTTCCAACTCAG+TGG | + | chr7_3:85765763-85765782 | Msa1132910:intron | 45.0% | |
| TCCAACTCAGTGGATGTTTG+TGG | + | chr7_3:85765773-85765792 | Msa1132910:intron | 45.0% | |
| ACCACAAACATCCACTGAGT+TGG | - | chr7_3:85765777-85765796 | None:intergenic | 45.0% | |
| CCCATCATTCAGGCTTAGTT+TGG | + | chr7_3:85766450-85766469 | Msa1132910:intron | 45.0% | |
| AGCAATGGCAATGAGGAAAG+AGG | - | chr7_3:85766785-85766804 | None:intergenic | 45.0% | |
| GAAAATGAGTACACCGGTAG+GGG | - | chr7_3:85766824-85766843 | None:intergenic | 45.0% | |
| GTGAAAATGAGTACACCGGT+AGG | - | chr7_3:85766826-85766845 | None:intergenic | 45.0% | |
| GGAAGCAAGTAGAAACGGAA+TGG | + | chr7_3:85767002-85767021 | Msa1132910:intron | 45.0% | |
| ! | TCTTTAGGAATCGAAGCTCG+AGG | + | chr7_3:85767184-85767203 | Msa1132910:intron | 45.0% |
| GAGCAAAGTTTGTACCGTTG+AGG | + | chr7_3:85767242-85767261 | Msa1132910:CDS | 45.0% | |
| AGGAAACCAAAGAAGTTGCC+TGG | + | chr7_3:85767262-85767281 | Msa1132910:CDS | 45.0% | |
| TTGCATAGGTGATGCTATGC+AGG | - | chr7_3:85767486-85767505 | None:intergenic | 45.0% | |
| CTTTCCAAGGCACAAACACA+AGG | - | chr7_3:85767646-85767665 | None:intergenic | 45.0% | |
| GGAATATGGAAGGGATTGTC+TGG | + | chr7_3:85768225-85768244 | Msa1132910:CDS | 45.0% | |
| GATTGTCTGGAGATGCATGT+TGG | + | chr7_3:85768238-85768257 | Msa1132910:CDS | 45.0% | |
| GGTGCAGCTATGGATTTACT+TGG | + | chr7_3:85768325-85768344 | Msa1132910:CDS | 45.0% | |
| TTCAGAGATGGCCAATTTGG+TGG | - | chr7_3:85768437-85768456 | None:intergenic | 45.0% | |
| TCATGTGATACGTACGTGAC+AGG | + | chr7_3:85769304-85769323 | Msa1132910:intron | 45.0% | |
| CATGTGATACGTACGTGACA+GGG | + | chr7_3:85769305-85769324 | Msa1132910:intron | 45.0% | |
| AGGGTCGTGAACGTTTGAAT+GGG | + | chr7_3:85769324-85769343 | Msa1132910:intron | 45.0% | |
| !!! | TATATAAACTAAATTTTAAA+CGG | - | chr7_3:85765413-85765432 | None:intergenic | 5.0% |
| !!! | ATTATTATATTATAATTTGT+GGG | + | chr7_3:85765810-85765829 | Msa1132910:intron | 5.0% |
| !!! | TTTTTTTTTTGTTAAATATA+TGG | - | chr7_3:85769098-85769117 | None:intergenic | 5.0% |
| GGGGATCCTGGTTATGGTTA+GGG | - | chr7_3:85764830-85764849 | None:intergenic | 50.0% | |
| !! | GTTTTGATGCCATGGAGACG+GGG | - | chr7_3:85764849-85764868 | None:intergenic | 50.0% |
| ACAATGAGGTCTAGCGCAAG+TGG | + | chr7_3:85766215-85766234 | Msa1132910:intron | 50.0% | |
| GCTCCTATTGCTAGGGCAAT+GGG | - | chr7_3:85767226-85767245 | None:intergenic | 50.0% | |
| TGCTCCTATTGCTAGGGCAA+TGG | - | chr7_3:85767227-85767246 | None:intergenic | 50.0% | |
| CATGTTGGAGCTGTTGAAGC+TGG | + | chr7_3:85768253-85768272 | Msa1132910:CDS | 50.0% | |
| ! | AGCTGGTGAACGTGCTATTG+TGG | + | chr7_3:85768270-85768289 | Msa1132910:CDS | 50.0% |
| ATTGCAACTGGTGGAACGCT+CGG | + | chr7_3:85768304-85768323 | Msa1132910:CDS | 50.0% | |
| ! | TTTAGAACGTGTCGGAGCAG+AGG | + | chr7_3:85768934-85768953 | Msa1132910:intron | 50.0% |
| CAGGGTCGTGAACGTTTGAA+TGG | + | chr7_3:85769323-85769342 | Msa1132910:intron | 50.0% | |
| TGAGACGAGAGAGACCCAAA+GGG | - | chr7_3:85769533-85769552 | None:intergenic | 50.0% | |
| ATGAGACGAGAGAGACCCAA+AGG | - | chr7_3:85769534-85769553 | None:intergenic | 50.0% | |
| CGGGGATCCTGGTTATGGTT+AGG | - | chr7_3:85764831-85764850 | None:intergenic | 55.0% | |
| TTGAAGGTGGTAGGGGTCCA+TGG | + | chr7_3:85765288-85765307 | Msa1132910:intron | 55.0% | |
| CCTATTGCTAGGGCAATGGG+AGG | - | chr7_3:85767223-85767242 | None:intergenic | 55.0% | |
| CCTCCCATTGCCCTAGCAAT+AGG | + | chr7_3:85767220-85767239 | Msa1132910:CDS | 55.0% | |
| TGGGAAGCCGTTGTACGTGT+TGG | + | chr7_3:85769343-85769362 | Msa1132910:CDS | 55.0% | |
| GAAGCCGTTGTACGTGTTGG+TGG | + | chr7_3:85769346-85769365 | Msa1132910:CDS | 55.0% | |
| ACGAGAGAGACCCAAAGGGT+GGG | - | chr7_3:85769529-85769548 | None:intergenic | 55.0% | |
| GAAAACTGGGCCCAGACTAG+AGG | + | chr7_3:85769600-85769619 | Msa1132910:three_prime_UTR | 55.0% | |
| GGAGACGGGGATCCTGGTTA+TGG | - | chr7_3:85764836-85764855 | None:intergenic | 60.0% | |
| AACCAGGATCCCCGTCTCCA+TGG | + | chr7_3:85764837-85764856 | Msa1132910:CDS | 60.0% | |
| !! | TGGAACGCTCGGTGCAGCTA+TGG | + | chr7_3:85768315-85768334 | Msa1132910:CDS | 60.0% |
| ACGTGTCGGAGCAGAGGTAG+TGG | + | chr7_3:85768940-85768959 | Msa1132910:CDS | 60.0% | |
| GACGAGAGAGACCCAAAGGG+TGG | - | chr7_3:85769530-85769549 | None:intergenic | 60.0% | |
| AACTGGGCCCAGACTAGAGG+TGG | + | chr7_3:85769603-85769622 | Msa1132910:three_prime_UTR | 60.0% | |
| TGCCATGGAGACGGGGATCC+TGG | - | chr7_3:85764842-85764861 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 85764763 | 85769724 | 85764763 | ID=Msa1132910;Name=Msa1132910 |
| chr7_3 | mRNA | 85764763 | 85769724 | 85764763 | ID=Msa1132910-mRNA-1;Parent=Msa1132910;Name=Msa1132910-mRNA-1;_AED=0.25;_eAED=0.25;_QI=53|1|1|1|1|1|6|339|186 |
| chr7_3 | exon | 85764763 | 85764903 | 85764763 | ID=Msa1132910-mRNA-1:exon:25746;Parent=Msa1132910-mRNA-1 |
| chr7_3 | exon | 85765069 | 85765179 | 85765069 | ID=Msa1132910-mRNA-1:exon:25747;Parent=Msa1132910-mRNA-1 |
| chr7_3 | exon | 85767191 | 85767283 | 85767191 | ID=Msa1132910-mRNA-1:exon:25748;Parent=Msa1132910-mRNA-1 |
| chr7_3 | exon | 85768197 | 85768346 | 85768197 | ID=Msa1132910-mRNA-1:exon:25749;Parent=Msa1132910-mRNA-1 |
| chr7_3 | exon | 85768939 | 85768997 | 85768939 | ID=Msa1132910-mRNA-1:exon:25750;Parent=Msa1132910-mRNA-1 |
| chr7_3 | exon | 85769326 | 85769724 | 85769326 | ID=Msa1132910-mRNA-1:exon:25751;Parent=Msa1132910-mRNA-1 |
| chr7_3 | five_prime_UTR | 85764763 | 85764815 | 85764763 | ID=Msa1132910-mRNA-1:five_prime_utr;Parent=Msa1132910-mRNA-1 |
| chr7_3 | CDS | 85764816 | 85764903 | 85764816 | ID=Msa1132910-mRNA-1:cds;Parent=Msa1132910-mRNA-1 |
| chr7_3 | CDS | 85765069 | 85765179 | 85765069 | ID=Msa1132910-mRNA-1:cds;Parent=Msa1132910-mRNA-1 |
| chr7_3 | CDS | 85767191 | 85767283 | 85767191 | ID=Msa1132910-mRNA-1:cds;Parent=Msa1132910-mRNA-1 |
| chr7_3 | CDS | 85768197 | 85768346 | 85768197 | ID=Msa1132910-mRNA-1:cds;Parent=Msa1132910-mRNA-1 |
| chr7_3 | CDS | 85768939 | 85768997 | 85768939 | ID=Msa1132910-mRNA-1:cds;Parent=Msa1132910-mRNA-1 |
| chr7_3 | CDS | 85769326 | 85769385 | 85769326 | ID=Msa1132910-mRNA-1:cds;Parent=Msa1132910-mRNA-1 |
| chr7_3 | three_prime_UTR | 85769386 | 85769724 | 85769386 | ID=Msa1132910-mRNA-1:three_prime_utr;Parent=Msa1132910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
