Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267330 | XP_003611278.1 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 9.62e-128 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267330 | sp|Q9SUW2|APT3_ARATH | 83.425 | 181 | 30 | 0 | 3 | 183 | 2 | 182 | 1.17e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267330 | G7JW03 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 4.60e-128 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0267330 | Msa0639260 | 0.825932 | 3.579803e-54 | -8.615850e-47 |
| Msa0267330 | Msa0754220 | 0.951984 | 6.405854e-110 | -8.615850e-47 |
| Msa0267330 | Msa0795950 | 0.918080 | 2.421385e-86 | -8.615850e-47 |
| Msa0267330 | Msa1132910 | 0.910989 | 1.009274e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267330 | MtrunA17_Chr5g0399031 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 8.85e-132 | 367 |
| Msa0267330 | MtrunA17_Chr4g0056471 | 89.189 | 185 | 18 | 1 | 1 | 185 | 1 | 183 | 4.86e-116 | 327 |
| Msa0267330 | MtrunA17_Chr3g0134721 | 78.531 | 177 | 38 | 0 | 6 | 182 | 66 | 242 | 8.83e-101 | 290 |
| Msa0267330 | MtrunA17_Chr3g0137551 | 73.988 | 173 | 45 | 0 | 10 | 182 | 11 | 183 | 4.04e-90 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267330 | AT4G22570.1 | 83.425 | 181 | 30 | 0 | 3 | 183 | 2 | 182 | 1.19e-106 | 303 |
| Msa0267330 | AT4G12440.3 | 84.270 | 178 | 28 | 0 | 6 | 183 | 4 | 181 | 7.00e-106 | 301 |
| Msa0267330 | AT4G12440.2 | 84.270 | 178 | 28 | 0 | 6 | 183 | 4 | 181 | 7.00e-106 | 301 |
| Msa0267330 | AT1G27450.2 | 77.586 | 174 | 39 | 0 | 9 | 182 | 7 | 180 | 4.49e-96 | 276 |
| Msa0267330 | AT1G27450.4 | 77.586 | 174 | 39 | 0 | 9 | 182 | 7 | 180 | 4.49e-96 | 276 |
| Msa0267330 | AT1G27450.1 | 77.586 | 174 | 39 | 0 | 9 | 182 | 67 | 240 | 8.20e-96 | 278 |
| Msa0267330 | AT5G11160.1 | 77.457 | 173 | 39 | 0 | 10 | 182 | 11 | 183 | 1.46e-92 | 268 |
| Msa0267330 | AT1G80050.1 | 74.566 | 173 | 44 | 0 | 10 | 182 | 11 | 183 | 3.21e-92 | 267 |
| Msa0267330 | AT1G27450.3 | 67.839 | 199 | 39 | 1 | 9 | 182 | 83 | 281 | 1.80e-89 | 263 |
| Msa0267330 | AT1G80050.2 | 76.159 | 151 | 36 | 0 | 32 | 182 | 1 | 151 | 4.76e-81 | 238 |
| Msa0267330 | AT5G11160.2 | 77.536 | 138 | 31 | 0 | 10 | 147 | 11 | 148 | 2.53e-72 | 216 |
| Msa0267330 | AT4G22570.2 | 82.178 | 101 | 18 | 0 | 6 | 106 | 5 | 105 | 5.43e-55 | 170 |
| Msa0267330 | AT4G12440.1 | 88.172 | 93 | 11 | 0 | 6 | 98 | 4 | 96 | 2.13e-53 | 166 |
| Msa0267330 | AT4G12440.4 | 88.172 | 93 | 11 | 0 | 6 | 98 | 4 | 96 | 2.13e-53 | 166 |
Find 76 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCAGCTTTAGGGAAATT+AGG | 0.183357 | 2_2:-68902224 | None:intergenic |
| GCATTATTTACTATATTATA+TGG | 0.235159 | 2_2:+68906923 | Msa0267330:three_prime_UTR |
| CAAGAATATATTCTGGAATA+TGG | 0.262836 | 2_2:+68905537 | Msa0267330:CDS |
| ATACAATCAAATTATGGATT+TGG | 0.266097 | 2_2:+68906667 | Msa0267330:three_prime_UTR |
| CGTCCCATACAATCAAATTA+TGG | 0.278879 | 2_2:+68906661 | Msa0267330:three_prime_UTR |
| AAACAGAACAAACCAGCTTT+AGG | 0.286654 | 2_2:-68902233 | None:intergenic |
| AGTATACCAGGCAACTTCTT+TGG | 0.298599 | 2_2:-68904611 | None:intergenic |
| AATCGTGTCCTTAAAAGCTT+TGG | 0.304890 | 2_2:-68902447 | None:intergenic |
| TTTATAAGCCACCTCTAGTC+TGG | 0.325716 | 2_2:-68906867 | None:intergenic |
| TACAATCAAATTATGGATTT+GGG | 0.330287 | 2_2:+68906668 | Msa0267330:three_prime_UTR |
| CATACTACAAGCTAATTAGA+TGG | 0.343120 | 2_2:-68906727 | None:intergenic |
| ATATGAGCTGCTCGTGAATA+TGG | 0.346111 | 2_2:+68906636 | Msa0267330:exon |
| AAATCCATAATTTGATTGTA+TGG | 0.354557 | 2_2:-68906665 | None:intergenic |
| AACCAGCTTTAGGGAAATTA+GGG | 0.373142 | 2_2:-68902223 | None:intergenic |
| GCTCCTATTGCTAGGGCAAT+GGG | 0.388468 | 2_2:-68904566 | None:intergenic |
| AATTTGTATGACCCACCCTT+TGG | 0.390878 | 2_2:+68906771 | Msa0267330:three_prime_UTR |
| AGACATAACAACTTTGTTGC+TGG | 0.393391 | 2_2:+68902421 | Msa0267330:CDS |
| CGGGGATCCTGGTTATGGTT+AGG | 0.395044 | 2_2:-68902167 | None:intergenic |
| CCTCCCATTGCCCTAGCAAT+AGG | 0.399883 | 2_2:+68904563 | Msa0267330:CDS |
| AACAGAACAAACCAGCTTTA+GGG | 0.408090 | 2_2:-68902232 | None:intergenic |
| AATACACATACCTTCAGTTC+TGG | 0.411464 | 2_2:-68906244 | None:intergenic |
| GTTGATGATTTGATTGCAAC+TGG | 0.419866 | 2_2:+68905618 | Msa0267330:CDS |
| ATCGTGTCCTTAAAAGCTTT+GGG | 0.421866 | 2_2:-68902446 | None:intergenic |
| TATATCTCAAGAATATATTC+TGG | 0.424805 | 2_2:+68905530 | Msa0267330:CDS |
| ATTTGTATGACCCACCCTTT+GGG | 0.430577 | 2_2:+68906772 | Msa0267330:three_prime_UTR |
| GCAACAAAGTTGTTATGTCT+TGG | 0.434670 | 2_2:-68902418 | None:intergenic |
| GGAGACGGGGATCCTGGTTA+TGG | 0.440718 | 2_2:-68902172 | None:intergenic |
| CAGGGTCGTGAACGTTTGAA+TGG | 0.446474 | 2_2:+68906579 | Msa0267330:intron |
| GTCCCTAATTTCCCTAAAGC+TGG | 0.449348 | 2_2:+68902221 | Msa0267330:CDS |
| GGAGCTTAATTTAGTGAAGA+AGG | 0.449747 | 2_2:+68906898 | Msa0267330:three_prime_UTR |
| TGCTCCTATTGCTAGGGCAA+TGG | 0.450009 | 2_2:-68904567 | None:intergenic |
| GGAATATGGAAGGGATTGTC+TGG | 0.452778 | 2_2:+68905551 | Msa0267330:CDS |
| ATTTGGGAGATGTCATTTAG+TGG | 0.454410 | 2_2:+68906684 | Msa0267330:three_prime_UTR |
| GAGGAAGAGGAGAAAGAAAG+TGG | 0.458352 | 2_2:-68902100 | None:intergenic |
| TGCCATGGAGACGGGGATCC+TGG | 0.460160 | 2_2:-68902178 | None:intergenic |
| ACGTGTGGGAGCAGAGGTAG+TGG | 0.480614 | 2_2:+68906198 | Msa0267330:CDS |
| CAAACTTTGCTCCTATTGCT+AGG | 0.482941 | 2_2:-68904574 | None:intergenic |
| TGAGTACACAGAAGAGGAAG+AGG | 0.493149 | 2_2:-68902113 | None:intergenic |
| TGGAACGCTCGGTGCAGCTA+TGG | 0.495730 | 2_2:+68905641 | Msa0267330:CDS |
| AATCCATAATTTGATTGTAT+GGG | 0.503655 | 2_2:-68906664 | None:intergenic |
| GGGGATCCTGGTTATGGTTA+GGG | 0.510107 | 2_2:-68902166 | None:intergenic |
| AACTTCTTTGGTTTCCTCAA+CGG | 0.516612 | 2_2:-68904599 | None:intergenic |
| TTTGTTTGTTGAGCGTTACA+AGG | 0.520818 | 2_2:+68902472 | Msa0267330:CDS |
| AGGAAGAGGAGAAAGAAAGT+GGG | 0.531412 | 2_2:-68902099 | None:intergenic |
| AGGAAACCAAAGAAGTTGCC+TGG | 0.536887 | 2_2:+68904605 | Msa0267330:CDS |
| CATGTTGGAGCTGTTGAAGC+TGG | 0.538546 | 2_2:+68905579 | Msa0267330:CDS |
| AATATATTCTGGAATATGGA+AGG | 0.538905 | 2_2:+68905541 | Msa0267330:CDS |
| GGTGCAGCTATGGATTTACT+TGG | 0.542272 | 2_2:+68905651 | Msa0267330:CDS |
| AACCAGGATCCCCGTCTCCA+TGG | 0.548404 | 2_2:+68902176 | Msa0267330:CDS |
| ATTGCAACTGGTGGAACGCT+CGG | 0.559268 | 2_2:+68905630 | Msa0267330:CDS |
| AGGGTCGTGAACGTTTGAAT+GGG | 0.559366 | 2_2:+68906580 | Msa0267330:intron |
| AAACTTTGCTCCTATTGCTA+GGG | 0.561475 | 2_2:-68904573 | None:intergenic |
| GAAGCCGTTGTACGTGTTGG+TGG | 0.568047 | 2_2:+68906602 | Msa0267330:CDS |
| ATACTACAAGCTAATTAGAT+GGG | 0.571753 | 2_2:-68906726 | None:intergenic |
| ATGAGACGAGAGAGACCCAA+AGG | 0.574212 | 2_2:-68906787 | None:intergenic |
| GTGAGTTGAGTACACAGAAG+AGG | 0.575336 | 2_2:-68902119 | None:intergenic |
| TTATAAGCCACCTCTAGTCT+GGG | 0.578321 | 2_2:-68906866 | None:intergenic |
| AACTGGGCCCAGACTAGAGG+TGG | 0.593639 | 2_2:+68906859 | Msa0267330:three_prime_UTR |
| TTATTTACTATATTATATGG+TGG | 0.594062 | 2_2:+68906926 | Msa0267330:three_prime_UTR |
| GACGAGAGAGACCCAAAGGG+TGG | 0.599552 | 2_2:-68906783 | None:intergenic |
| GAAAACTGGGCCCAGACTAG+AGG | 0.599698 | 2_2:+68906856 | Msa0267330:three_prime_UTR |
| GAGCAAAGTTTGTACCGTTG+AGG | 0.600941 | 2_2:+68904585 | Msa0267330:CDS |
| TTGTTTGTTGAGCGTTACAA+GGG | 0.608001 | 2_2:+68902473 | Msa0267330:CDS |
| ATATATTCTGGAATATGGAA+GGG | 0.616454 | 2_2:+68905542 | Msa0267330:CDS |
| AATTGAATTACCAGAACTGA+AGG | 0.617672 | 2_2:+68906234 | Msa0267330:CDS |
| TCTTTAGGAATCGAAGCTCG+AGG | 0.622592 | 2_2:+68904527 | Msa0267330:intron |
| GATGATTTGATTGCAACTGG+TGG | 0.623926 | 2_2:+68905621 | Msa0267330:CDS |
| GATTGTCTGGAGATGCATGT+TGG | 0.625993 | 2_2:+68905564 | Msa0267330:CDS |
| TTTAGAACGTGTGGGAGCAG+AGG | 0.626121 | 2_2:+68906192 | Msa0267330:intron |
| TGAGACGAGAGAGACCCAAA+GGG | 0.626189 | 2_2:-68906786 | None:intergenic |
| TGGGAAGCCGTTGTACGTGT+TGG | 0.631023 | 2_2:+68906599 | Msa0267330:CDS |
| TATTCCACCAACACGTACAA+CGG | 0.631070 | 2_2:-68906606 | None:intergenic |
| ACGAGAGAGACCCAAAGGGT+GGG | 0.632924 | 2_2:-68906782 | None:intergenic |
| AGCTGGTGAACGTGCTATTG+TGG | 0.633448 | 2_2:+68905596 | Msa0267330:CDS |
| GTCTTACCCTAACCATAACC+AGG | 0.656381 | 2_2:+68902160 | Msa0267330:CDS |
| CCTATTGCTAGGGCAATGGG+AGG | 0.682237 | 2_2:-68904563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATATGAATCAAA+GGG | - | chr2_2:68902297-68902316 | None:intergenic | 10.0% |
| !! | AAAAATAAAATATGAATCAA+AGG | - | chr2_2:68902298-68902317 | None:intergenic | 10.0% |
| !!! | ATATTTTTTAACTGAAAAAA+TGG | + | chr2_2:68902536-68902555 | Msa0267330:intron | 10.0% |
| !!! | TTTTATTTTGCATATATTTT+TGG | - | chr2_2:68902707-68902726 | None:intergenic | 10.0% |
| !!! | ATTATAATATAATAATGGAA+GGG | - | chr2_2:68903147-68903166 | None:intergenic | 10.0% |
| !!! | AATTATAATATAATAATGGA+AGG | - | chr2_2:68903148-68903167 | None:intergenic | 10.0% |
| !! | CACAAATTATAATATAATAA+TGG | - | chr2_2:68903152-68903171 | None:intergenic | 10.0% |
| !! | CATTATTATATTATAATTTG+TGG | + | chr2_2:68903150-68903169 | Msa0267330:intron | 10.0% |
| !!! | TTTGTACTATTTTTATTATT+TGG | + | chr2_2:68903290-68903309 | Msa0267330:intron | 10.0% |
| !!! | TTATTAAAAGTTTTTCAATT+AGG | - | chr2_2:68905809-68905828 | None:intergenic | 10.0% |
| !!! | TAAATTTTATTAGAAAAATG+GGG | - | chr2_2:68906821-68906840 | None:intergenic | 10.0% |
| !!! | CATAAATTTTATTAGAAAAA+TGG | - | chr2_2:68906823-68906842 | None:intergenic | 10.0% |
| !! | AAATAAAATATGAATCAAAG+GGG | - | chr2_2:68902296-68902315 | None:intergenic | 15.0% |
| !! | ATTTAATTGTTTATCAAATC+AGG | + | chr2_2:68904060-68904079 | Msa0267330:intron | 15.0% |
| !! | TTTCCATTGAAATATATAAA+TGG | - | chr2_2:68904287-68904306 | None:intergenic | 15.0% |
| !!! | ATTACGTATAAATAATTTGT+AGG | - | chr2_2:68905116-68905135 | None:intergenic | 15.0% |
| !!! | TAAAACAATTCATATGATTT+TGG | - | chr2_2:68905203-68905222 | None:intergenic | 15.0% |
| !!! | GTTTGAAATATTAAAAGAAT+CGG | + | chr2_2:68905841-68905860 | Msa0267330:intron | 15.0% |
| !! | TTAAAAACTGCATTTAAATT+TGG | - | chr2_2:68905964-68905983 | None:intergenic | 15.0% |
| !! | AAAAGACATCAATATAATAA+AGG | - | chr2_2:68906174-68906193 | None:intergenic | 15.0% |
| !!! | AAATTTTATTAGAAAAATGG+GGG | - | chr2_2:68906820-68906839 | None:intergenic | 15.0% |
| !! | GCATTATTTACTATATTATA+TGG | + | chr2_2:68906923-68906942 | Msa0267330:three_prime_UTR | 15.0% |
| !! | TTATTTACTATATTATATGG+TGG | + | chr2_2:68906926-68906945 | Msa0267330:three_prime_UTR | 15.0% |
| !!! | AAGCTTTATTTTTTGTTTTG+AGG | + | chr2_2:68902327-68902346 | Msa0267330:intron | 20.0% |
| !!! | TTATTTATTTTGTTTGAACG+TGG | + | chr2_2:68902578-68902597 | Msa0267330:intron | 20.0% |
| !!! | TATTTATTTTGTTTGAACGT+GGG | + | chr2_2:68902579-68902598 | Msa0267330:intron | 20.0% |
| !! | AAAAGAGATTCAAATAAACA+CGG | - | chr2_2:68903702-68903721 | None:intergenic | 20.0% |
| !! | GTACCATTTATATATTTCAA+TGG | + | chr2_2:68904281-68904300 | Msa0267330:intron | 20.0% |
| !! | GTAGAACATTTAAACTTAAT+TGG | - | chr2_2:68904737-68904756 | None:intergenic | 20.0% |
| !!! | ATAACTTTTGTTCAAAATTC+AGG | - | chr2_2:68905174-68905193 | None:intergenic | 20.0% |
| !! | TTGTTCAGAAACTAATTTAA+CGG | + | chr2_2:68905252-68905271 | Msa0267330:intron | 20.0% |
| !! | TTATTTGTTTATCAGTTATG+TGG | + | chr2_2:68905356-68905375 | Msa0267330:intron | 20.0% |
| !! | TTTGTTACCATAAAGAAAAT+GGG | - | chr2_2:68905489-68905508 | None:intergenic | 20.0% |
| !!! | TTTTGTTACCATAAAGAAAA+TGG | - | chr2_2:68905490-68905509 | None:intergenic | 20.0% |
| !! | TATATCTCAAGAATATATTC+TGG | + | chr2_2:68905530-68905549 | Msa0267330:CDS | 20.0% |
| !!! | ACAAAAGATTTTTAACTGTA+GGG | - | chr2_2:68905736-68905755 | None:intergenic | 20.0% |
| !! | TAACATGTAAATTTCAAACT+CGG | - | chr2_2:68906011-68906030 | None:intergenic | 20.0% |
| !!! | TTTTAACTATATTGATGTCT+TGG | + | chr2_2:68906105-68906124 | Msa0267330:intron | 20.0% |
| !! | AAAACAAACACAACTAATAA+TGG | - | chr2_2:68906331-68906350 | None:intergenic | 20.0% |
| !! | AATCCATAATTTGATTGTAT+GGG | - | chr2_2:68906667-68906686 | None:intergenic | 20.0% |
| !! | AAATCCATAATTTGATTGTA+TGG | - | chr2_2:68906668-68906687 | None:intergenic | 20.0% |
| !! | ATACAATCAAATTATGGATT+TGG | + | chr2_2:68906667-68906686 | Msa0267330:three_prime_UTR | 20.0% |
| !! | TACAATCAAATTATGGATTT+GGG | + | chr2_2:68906668-68906687 | Msa0267330:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTGTTGCAATGAC+AGG | + | chr2_2:68902386-68902405 | Msa0267330:intron | 25.0% |
| !! | AAAAATATTTCTGTTGTTGC+AGG | + | chr2_2:68902497-68902516 | Msa0267330:CDS | 25.0% |
| ! | AAACTTGACAAAACAATCAA+TGG | - | chr2_2:68902993-68903012 | None:intergenic | 25.0% |
| ! | AAATAGTACAAAGAACGAAA+GGG | - | chr2_2:68903282-68903301 | None:intergenic | 25.0% |
| ! | AAAATAGTACAAAGAACGAA+AGG | - | chr2_2:68903283-68903302 | None:intergenic | 25.0% |
| ! | AAAATGAACAAGAACACTAT+TGG | + | chr2_2:68903313-68903332 | Msa0267330:intron | 25.0% |
| ! | TACTATGCTCATAGTTATTT+GGG | + | chr2_2:68903390-68903409 | Msa0267330:intron | 25.0% |
| ! | ATTATAGACTCCAATATTAG+AGG | + | chr2_2:68903479-68903498 | Msa0267330:intron | 25.0% |
| ! | AATTGACTATTGATACAATG+AGG | + | chr2_2:68903542-68903561 | Msa0267330:intron | 25.0% |
| ! | GTTTGTAAGAATCATGAAAA+AGG | + | chr2_2:68903591-68903610 | Msa0267330:intron | 25.0% |
| !! | TGGACTATTTCTTTAATGTT+TGG | + | chr2_2:68903766-68903785 | Msa0267330:intron | 25.0% |
| ! | TGAGTTTATCTAGTTACATA+AGG | + | chr2_2:68903825-68903844 | Msa0267330:intron | 25.0% |
| ! | GAAATTGTGAATAATGTATG+AGG | + | chr2_2:68904100-68904119 | Msa0267330:intron | 25.0% |
| ! | CGTAGATTAAAAATTAGCAA+TGG | - | chr2_2:68904143-68904162 | None:intergenic | 25.0% |
| !! | ATAATCTTAGTGCTATTGTA+TGG | + | chr2_2:68904200-68904219 | Msa0267330:intron | 25.0% |
| !! | TTGTATGGTAGTAGATATTT+TGG | + | chr2_2:68904215-68904234 | Msa0267330:intron | 25.0% |
| ! | ATTTCAATGGAAAACAATGA+AGG | + | chr2_2:68904294-68904313 | Msa0267330:intron | 25.0% |
| ! | AAGATTTAGAAATCCTCTAT+TGG | + | chr2_2:68904324-68904343 | Msa0267330:intron | 25.0% |
| ! | TTACTACTTTATAAACATGG+AGG | - | chr2_2:68904399-68904418 | None:intergenic | 25.0% |
| !! | GTGTTACTACTTTATAAACA+TGG | - | chr2_2:68904402-68904421 | None:intergenic | 25.0% |
| ! | TCTTCTCTTCTTTATTCTTT+AGG | + | chr2_2:68904512-68904531 | Msa0267330:intron | 25.0% |
| ! | CATTTAAACTTAATTGGTAG+AGG | - | chr2_2:68904731-68904750 | None:intergenic | 25.0% |
| ! | AAATAGTGAAGAATCAATTG+AGG | - | chr2_2:68904793-68904812 | None:intergenic | 25.0% |
| !! | ATTGATTCTTCACTATTTCA+TGG | + | chr2_2:68904795-68904814 | Msa0267330:intron | 25.0% |
| ! | AATAAATTGCACATTTGCAT+AGG | - | chr2_2:68904844-68904863 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTCATAAACTGC+TGG | - | chr2_2:68905142-68905161 | None:intergenic | 25.0% |
| !!! | CAAGAATATATTCTGGAATA+TGG | + | chr2_2:68905537-68905556 | Msa0267330:CDS | 25.0% |
| !!! | AATATATTCTGGAATATGGA+AGG | + | chr2_2:68905541-68905560 | Msa0267330:CDS | 25.0% |
| !!! | ATATATTCTGGAATATGGAA+GGG | + | chr2_2:68905542-68905561 | Msa0267330:CDS | 25.0% |
| !!! | GACAAAAGATTTTTAACTGT+AGG | - | chr2_2:68905737-68905756 | None:intergenic | 25.0% |
| !! | ATTAGGTCTGTTTTATGTTT+TGG | - | chr2_2:68905792-68905811 | None:intergenic | 25.0% |
| ! | TCGGATACTAATATGAAAAT+AGG | + | chr2_2:68905860-68905879 | Msa0267330:intron | 25.0% |
| !! | TTTAGAGTAAACCGTTAAAT+TGG | - | chr2_2:68905895-68905914 | None:intergenic | 25.0% |
| !! | AGTCAATATTGTTATTGATC+AGG | + | chr2_2:68906412-68906431 | Msa0267330:intron | 25.0% |
| !!! | CAAAGTCATTTTCATTAAAC+AGG | - | chr2_2:68906475-68906494 | None:intergenic | 25.0% |
| ! | TAGCACATTAAAAATTGTCT+CGG | + | chr2_2:68906507-68906526 | Msa0267330:intron | 25.0% |
| ! | ATACTACAAGCTAATTAGAT+GGG | - | chr2_2:68906729-68906748 | None:intergenic | 25.0% |
| ! | ACATGACAAAAATGAAAACT+GGG | + | chr2_2:68906843-68906862 | Msa0267330:three_prime_UTR | 25.0% |
| CATCACTATTGTTATCTTGA+AGG | + | chr2_2:68902611-68902630 | Msa0267330:intron | 30.0% | |
| !! | TTTTGAGAGACATTATGCAA+TGG | + | chr2_2:68902895-68902914 | Msa0267330:intron | 30.0% |
| CTATAAGCTCTTGTAATTTG+TGG | + | chr2_2:68902954-68902973 | Msa0267330:intron | 30.0% | |
| ! | TCTTGTAATTTGTGGTTAGT+GGG | + | chr2_2:68902962-68902981 | Msa0267330:intron | 30.0% |
| ! | TTTTGTCAAGTTTTCTTCAG+CGG | + | chr2_2:68903000-68903019 | Msa0267330:intron | 30.0% |
| TGGAATCAATTTATCACCAA+TGG | - | chr2_2:68903062-68903081 | None:intergenic | 30.0% | |
| ATACAACTATGCATCTTGTT+TGG | + | chr2_2:68903248-68903267 | Msa0267330:intron | 30.0% | |
| AATAGTACAAAGAACGAAAG+GGG | - | chr2_2:68903281-68903300 | None:intergenic | 30.0% | |
| GTACTATGCTCATAGTTATT+TGG | + | chr2_2:68903389-68903408 | Msa0267330:intron | 30.0% | |
| ! | TTTCTTTTGTTAGACATACC+CGG | + | chr2_2:68903443-68903462 | Msa0267330:intron | 30.0% |
| TATAATTGAAGAGAAGCTTC+CGG | - | chr2_2:68903465-68903484 | None:intergenic | 30.0% | |
| ACAAATTCCTCCTCTAATAT+TGG | - | chr2_2:68903492-68903511 | None:intergenic | 30.0% | |
| ! | CTATTGCATTTTTAATGCGT+TGG | + | chr2_2:68903648-68903667 | Msa0267330:intron | 30.0% |
| !! | TTAATGCGTTGGTATTGTTT+TGG | + | chr2_2:68903659-68903678 | Msa0267330:intron | 30.0% |
| ! | TTTGAATCTCTTTTAGCATG+TGG | + | chr2_2:68903708-68903727 | Msa0267330:intron | 30.0% |
| ! | CATCAACACTTTTATCGTAT+AGG | - | chr2_2:68904027-68904046 | None:intergenic | 30.0% |
| TTGTTTATCAAATCAGGTCT+TGG | + | chr2_2:68904066-68904085 | Msa0267330:intron | 30.0% | |
| AAAAATTAGCAATGGCAATG+AGG | - | chr2_2:68904135-68904154 | None:intergenic | 30.0% | |
| TCAGTTTCTTACTTTCATGT+TGG | + | chr2_2:68904238-68904257 | Msa0267330:intron | 30.0% | |
| CTTTATAAACATGGAGGAAA+GGG | - | chr2_2:68904393-68904412 | None:intergenic | 30.0% | |
| ACTTTATAAACATGGAGGAA+AGG | - | chr2_2:68904394-68904413 | None:intergenic | 30.0% | |
| TAACACACTAGTATTATCCA+TGG | + | chr2_2:68904416-68904435 | Msa0267330:intron | 30.0% | |
| GTGCAATTTATTTGTGAGAA+TGG | + | chr2_2:68904852-68904871 | Msa0267330:intron | 30.0% | |
| CGAAGATTGAAACACAAATA+AGG | - | chr2_2:68904892-68904911 | None:intergenic | 30.0% | |
| ! | ATAAATCAAGTTTTGCGCAT+TGG | - | chr2_2:68904966-68904985 | None:intergenic | 30.0% |
| ! | TACTATCTGCTTTCAACTTT+TGG | + | chr2_2:68905301-68905320 | Msa0267330:intron | 30.0% |
| ACTTTGATCAAGATCATTGT+TGG | + | chr2_2:68905395-68905414 | Msa0267330:intron | 30.0% | |
| ! | ACTTTCTCCCATTTTCTTTA+TGG | + | chr2_2:68905479-68905498 | Msa0267330:intron | 30.0% |
| TCTGTATGTTCAGATGAAAT+CGG | + | chr2_2:68905707-68905726 | Msa0267330:intron | 30.0% | |
| AACAACTACATTTGTGCTAA+AGG | - | chr2_2:68905927-68905946 | None:intergenic | 30.0% | |
| TTTAGCACAAATGTAGTTGT+TGG | + | chr2_2:68905926-68905945 | Msa0267330:intron | 30.0% | |
| GCTGAATATAAAGATGAAAC+AGG | - | chr2_2:68906063-68906082 | None:intergenic | 30.0% | |
| TTCCTATTTGTCTGACTATA+TGG | + | chr2_2:68906144-68906163 | Msa0267330:intron | 30.0% | |
| ATCCATATAGTCAGACAAAT+AGG | - | chr2_2:68906149-68906168 | None:intergenic | 30.0% | |
| AATTGAATTACCAGAACTGA+AGG | + | chr2_2:68906234-68906253 | Msa0267330:CDS | 30.0% | |
| CATACTACAAGCTAATTAGA+TGG | - | chr2_2:68906730-68906749 | None:intergenic | 30.0% | |
| GACATGACAAAAATGAAAAC+TGG | + | chr2_2:68906842-68906861 | Msa0267330:three_prime_UTR | 30.0% | |
| !!! | GAATCTTAGTTTTGATGCCA+TGG | - | chr2_2:68902196-68902215 | None:intergenic | 35.0% |
| !! | AACCAGCTTTAGGGAAATTA+GGG | - | chr2_2:68902226-68902245 | None:intergenic | 35.0% |
| !! | AAACCAGCTTTAGGGAAATT+AGG | - | chr2_2:68902227-68902246 | None:intergenic | 35.0% |
| AACAGAACAAACCAGCTTTA+GGG | - | chr2_2:68902235-68902254 | None:intergenic | 35.0% | |
| AAACAGAACAAACCAGCTTT+AGG | - | chr2_2:68902236-68902255 | None:intergenic | 35.0% | |
| GCAACAAAGTTGTTATGTCT+TGG | - | chr2_2:68902421-68902440 | None:intergenic | 35.0% | |
| AGACATAACAACTTTGTTGC+TGG | + | chr2_2:68902421-68902440 | Msa0267330:CDS | 35.0% | |
| ATCGTGTCCTTAAAAGCTTT+GGG | - | chr2_2:68902449-68902468 | None:intergenic | 35.0% | |
| AATCGTGTCCTTAAAAGCTT+TGG | - | chr2_2:68902450-68902469 | None:intergenic | 35.0% | |
| ! | TTTGTTTGTTGAGCGTTACA+AGG | + | chr2_2:68902472-68902491 | Msa0267330:CDS | 35.0% |
| ! | TTGTTTGTTGAGCGTTACAA+GGG | + | chr2_2:68902473-68902492 | Msa0267330:CDS | 35.0% |
| CACTATTGTTATCTTGAAGG+TGG | + | chr2_2:68902614-68902633 | Msa0267330:intron | 35.0% | |
| ATTGTTATCTTGAAGGTGGT+AGG | + | chr2_2:68902618-68902637 | Msa0267330:intron | 35.0% | |
| TTGTTATCTTGAAGGTGGTA+GGG | + | chr2_2:68902619-68902638 | Msa0267330:intron | 35.0% | |
| !! | AGTGCGTAAATTTTAGTCTC+TGG | + | chr2_2:68902816-68902835 | Msa0267330:intron | 35.0% |
| ! | CTCTTGTAATTTGTGGTTAG+TGG | + | chr2_2:68902961-68902980 | Msa0267330:intron | 35.0% |
| TGTTTCTTGTGGATCCAATT+AGG | + | chr2_2:68903027-68903046 | Msa0267330:intron | 35.0% | |
| TGATTCCAACTTGTGTAATG+TGG | + | chr2_2:68903074-68903093 | Msa0267330:intron | 35.0% | |
| GTCACACTATAGTGAAATGT+AGG | - | chr2_2:68903179-68903198 | None:intergenic | 35.0% | |
| ATAGTACAAAGAACGAAAGG+GGG | - | chr2_2:68903280-68903299 | None:intergenic | 35.0% | |
| AATCCTAATGCACACACAAA+AGG | - | chr2_2:68903360-68903379 | None:intergenic | 35.0% | |
| TATGCTCATAGTTATTTGGG+TGG | + | chr2_2:68903393-68903412 | Msa0267330:intron | 35.0% | |
| ATGCTCATAGTTATTTGGGT+GGG | + | chr2_2:68903394-68903413 | Msa0267330:intron | 35.0% | |
| ATAATTGAAGAGAAGCTTCC+GGG | - | chr2_2:68903464-68903483 | None:intergenic | 35.0% | |
| ATAGACTCCAATATTAGAGG+AGG | + | chr2_2:68903482-68903501 | Msa0267330:intron | 35.0% | |
| !!! | GTTGGTATTGTTTTGGACTT+TGG | + | chr2_2:68903666-68903685 | Msa0267330:intron | 35.0% |
| !!! | AGCTTGCATTAGTTTTAGCA+TGG | + | chr2_2:68903746-68903765 | Msa0267330:intron | 35.0% |
| ! | AAGCAAACATAGAGAGCATA+TGG | - | chr2_2:68903923-68903942 | None:intergenic | 35.0% |
| AGAAGTGAAAATGAGTACAC+CGG | - | chr2_2:68904173-68904192 | None:intergenic | 35.0% | |
| TTTCTACTTGCTTCCAATAG+AGG | - | chr2_2:68904340-68904359 | None:intergenic | 35.0% | |
| CTATTGGAAGCAAGTAGAAA+CGG | + | chr2_2:68904340-68904359 | Msa0267330:intron | 35.0% | |
| AAGTGATATTCAAAACCAGC+AGG | - | chr2_2:68904453-68904472 | None:intergenic | 35.0% | |
| TATTGTCAAACCATGTGTTG+CGG | + | chr2_2:68904477-68904496 | Msa0267330:intron | 35.0% | |
| AAACTTTGCTCCTATTGCTA+GGG | - | chr2_2:68904576-68904595 | None:intergenic | 35.0% | |
| ! | AACTTCTTTGGTTTCCTCAA+CGG | - | chr2_2:68904602-68904621 | None:intergenic | 35.0% |
| CATGATGTTCAAAGTATACC+AGG | - | chr2_2:68904626-68904645 | None:intergenic | 35.0% | |
| ! | AAGTGTGTTTTTCGCTGAAA+TGG | + | chr2_2:68905007-68905026 | Msa0267330:intron | 35.0% |
| ! | AGTGTGTTTTTCGCTGAAAT+GGG | + | chr2_2:68905008-68905027 | Msa0267330:intron | 35.0% |
| TGAACTCTCTGTATATCAAG+AGG | - | chr2_2:68905057-68905076 | None:intergenic | 35.0% | |
| GTAACAAAATCTAACGTGTC+AGG | + | chr2_2:68905501-68905520 | Msa0267330:intron | 35.0% | |
| !! | GTTGATGATTTGATTGCAAC+TGG | + | chr2_2:68905618-68905637 | Msa0267330:CDS | 35.0% |
| ! | GATTTACTTGGTGAGAAAAG+TGG | + | chr2_2:68905663-68905682 | Msa0267330:intron | 35.0% |
| CAGATTGTTGAGGTGTAATA+AGG | - | chr2_2:68905691-68905710 | None:intergenic | 35.0% | |
| TCTGAACATACAGATTGTTG+AGG | - | chr2_2:68905701-68905720 | None:intergenic | 35.0% | |
| !!! | ATGTTTTGGTCACATGACTA+GGG | - | chr2_2:68905778-68905797 | None:intergenic | 35.0% |
| !!! | TATGTTTTGGTCACATGACT+AGG | - | chr2_2:68905779-68905798 | None:intergenic | 35.0% |
| GGTTACAGAGACCAATTTAA+CGG | + | chr2_2:68905881-68905900 | Msa0267330:intron | 35.0% | |
| ! | CGGTTTACTCTAAAAACTCT+AGG | + | chr2_2:68905901-68905920 | Msa0267330:intron | 35.0% |
| !!! | TGATGTCTTTTTAGAACGTG+TGG | + | chr2_2:68906183-68906202 | Msa0267330:intron | 35.0% |
| !!! | GATGTCTTTTTAGAACGTGT+GGG | + | chr2_2:68906184-68906203 | Msa0267330:intron | 35.0% |
| AATACACATACCTTCAGTTC+TGG | - | chr2_2:68906247-68906266 | None:intergenic | 35.0% | |
| GACTAGAAACACATGCATTT+CGG | - | chr2_2:68906396-68906415 | None:intergenic | 35.0% | |
| CGTCCCATACAATCAAATTA+TGG | + | chr2_2:68906661-68906680 | Msa0267330:three_prime_UTR | 35.0% | |
| ! | ATTTGGGAGATGTCATTTAG+TGG | + | chr2_2:68906684-68906703 | Msa0267330:three_prime_UTR | 35.0% |
| ! | GGTGGCTTATAAATTTTGCA+TGG | + | chr2_2:68906877-68906896 | Msa0267330:three_prime_UTR | 35.0% |
| GGAGCTTAATTTAGTGAAGA+AGG | + | chr2_2:68906898-68906917 | Msa0267330:three_prime_UTR | 35.0% | |
| !!! | TAGTTTTGATGCCATGGAGA+CGG | - | chr2_2:68902190-68902209 | None:intergenic | 40.0% |
| TGTTATCTTGAAGGTGGTAG+GGG | + | chr2_2:68902620-68902639 | Msa0267330:intron | 40.0% | |
| TCCATGGCTACAAGAAAGTT+GGG | + | chr2_2:68902643-68902662 | Msa0267330:intron | 40.0% | |
| ! | TGTAATTTGTGGTTAGTGGG+TGG | + | chr2_2:68902965-68902984 | Msa0267330:intron | 40.0% |
| AATGGTTCTCCATGCCTAAT+TGG | - | chr2_2:68903044-68903063 | None:intergenic | 40.0% | |
| AATTAGGCATGGAGAACCAT+TGG | + | chr2_2:68903043-68903062 | Msa0267330:intron | 40.0% | |
| AGTTGGAACATGCGTTAAGT+GGG | - | chr2_2:68903101-68903120 | None:intergenic | 40.0% | |
| !! | GACACTGTCACTTTAAGTAC+TGG | + | chr2_2:68903196-68903215 | Msa0267330:intron | 40.0% |
| ! | TGTCCTTTTGTGTGTGCATT+AGG | + | chr2_2:68903354-68903373 | Msa0267330:intron | 40.0% |
| TGCTCATAGTTATTTGGGTG+GGG | + | chr2_2:68903395-68903414 | Msa0267330:intron | 40.0% | |
| ATGTTTGGATCCCATCATTC+AGG | + | chr2_2:68903781-68903800 | Msa0267330:intron | 40.0% | |
| CCAAACTAAGCCTGAATGAT+GGG | - | chr2_2:68903794-68903813 | None:intergenic | 40.0% | |
| TCCAAACTAAGCCTGAATGA+TGG | - | chr2_2:68903795-68903814 | None:intergenic | 40.0% | |
| ! | TTTTAATCTACGTCCCCTAC+CGG | + | chr2_2:68904151-68904170 | Msa0267330:intron | 40.0% |
| TGAAAATGAGTACACCGGTA+GGG | - | chr2_2:68904168-68904187 | None:intergenic | 40.0% | |
| AGCAGGAAATGAAGAAACCA+TGG | - | chr2_2:68904436-68904455 | None:intergenic | 40.0% | |
| ATGGTTTCTTCATTTCCTGC+TGG | + | chr2_2:68904435-68904454 | Msa0267330:intron | 40.0% | |
| AATTAGTTCACCGCAACACA+TGG | - | chr2_2:68904490-68904509 | None:intergenic | 40.0% | |
| ! | GAAGCTCGAGGTTTCATTTT+TGG | + | chr2_2:68904539-68904558 | Msa0267330:CDS | 40.0% |
| CAAACTTTGCTCCTATTGCT+AGG | - | chr2_2:68904577-68904596 | None:intergenic | 40.0% | |
| AGTATACCAGGCAACTTCTT+TGG | - | chr2_2:68904614-68904633 | None:intergenic | 40.0% | |
| ATAGTGTGATGCAAGTGAAG+AGG | - | chr2_2:68904661-68904680 | None:intergenic | 40.0% | |
| GAGGAAGAAAACACACATAG+TGG | - | chr2_2:68904712-68904731 | None:intergenic | 40.0% | |
| ATTTGTGAGAATGGTTCTCG+AGG | + | chr2_2:68904861-68904880 | Msa0267330:intron | 40.0% | |
| TATTCCTTGTGTTTGTGCCT+TGG | + | chr2_2:68904983-68905002 | Msa0267330:intron | 40.0% | |
| AGCGAAAAACACACTTTCCA+AGG | - | chr2_2:68905003-68905022 | None:intergenic | 40.0% | |
| !! | TCAGTTATGTGGCTTTGTCA+TGG | + | chr2_2:68905367-68905386 | Msa0267330:intron | 40.0% |
| GTCAGACAAAATCTTGTGTC+AGG | + | chr2_2:68905434-68905453 | Msa0267330:intron | 40.0% | |
| AGACAAAATCTTGTGTCAGG+AGG | + | chr2_2:68905437-68905456 | Msa0267330:intron | 40.0% | |
| GATGATTTGATTGCAACTGG+TGG | + | chr2_2:68905621-68905640 | Msa0267330:CDS | 40.0% | |
| ATGTGAATACGTACGTGACA+GGG | + | chr2_2:68906561-68906580 | Msa0267330:intron | 40.0% | |
| TATTCCACCAACACGTACAA+CGG | - | chr2_2:68906609-68906628 | None:intergenic | 40.0% | |
| ATATGAGCTGCTCGTGAATA+TGG | + | chr2_2:68906636-68906655 | Msa0267330:exon | 40.0% | |
| AATTTGTATGACCCACCCTT+TGG | + | chr2_2:68906771-68906790 | Msa0267330:three_prime_UTR | 40.0% | |
| ATTTGTATGACCCACCCTTT+GGG | + | chr2_2:68906772-68906791 | Msa0267330:three_prime_UTR | 40.0% | |
| TTATAAGCCACCTCTAGTCT+GGG | - | chr2_2:68906869-68906888 | None:intergenic | 40.0% | |
| TTTATAAGCCACCTCTAGTC+TGG | - | chr2_2:68906870-68906889 | None:intergenic | 40.0% | |
| TGAGTACACAGAAGAGGAAG+AGG | - | chr2_2:68902116-68902135 | None:intergenic | 45.0% | |
| ! | GTGAGTTGAGTACACAGAAG+AGG | - | chr2_2:68902122-68902141 | None:intergenic | 45.0% |
| GTCTTACCCTAACCATAACC+AGG | + | chr2_2:68902160-68902179 | Msa0267330:CDS | 45.0% | |
| !! | AGTTTTGATGCCATGGAGAC+GGG | - | chr2_2:68902189-68902208 | None:intergenic | 45.0% |
| GTCCCTAATTTCCCTAAAGC+TGG | + | chr2_2:68902221-68902240 | Msa0267330:CDS | 45.0% | |
| ! | GCTGGATCCCAAAGCTTTTA+AGG | + | chr2_2:68902439-68902458 | Msa0267330:CDS | 45.0% |
| GTCCATGGCTACAAGAAAGT+TGG | + | chr2_2:68902642-68902661 | Msa0267330:intron | 45.0% | |
| ACCCAACTTTCTTGTAGCCA+TGG | - | chr2_2:68902647-68902666 | None:intergenic | 45.0% | |
| TGGCTACAAGAAAGTTGGGT+AGG | + | chr2_2:68902647-68902666 | Msa0267330:intron | 45.0% | |
| ! | TCAGCGGTTCTTGTTTCTTG+TGG | + | chr2_2:68903016-68903035 | Msa0267330:intron | 45.0% |
| CTTGTGGATCCAATTAGGCA+TGG | + | chr2_2:68903032-68903051 | Msa0267330:intron | 45.0% | |
| TGGGTCCACATTACACAAGT+TGG | - | chr2_2:68903082-68903101 | None:intergenic | 45.0% | |
| GAGTTGGAACATGCGTTAAG+TGG | - | chr2_2:68903102-68903121 | None:intergenic | 45.0% | |
| TAACGCATGTTCCAACTCAG+TGG | + | chr2_2:68903104-68903123 | Msa0267330:intron | 45.0% | |
| TCCAACTCAGTGGATGTTTG+TGG | + | chr2_2:68903114-68903133 | Msa0267330:intron | 45.0% | |
| ACCACAAACATCCACTGAGT+TGG | - | chr2_2:68903118-68903137 | None:intergenic | 45.0% | |
| CCCATCATTCAGGCTTAGTT+TGG | + | chr2_2:68903791-68903810 | Msa0267330:intron | 45.0% | |
| AGCAATGGCAATGAGGAAAG+AGG | - | chr2_2:68904128-68904147 | None:intergenic | 45.0% | |
| GAAAATGAGTACACCGGTAG+GGG | - | chr2_2:68904167-68904186 | None:intergenic | 45.0% | |
| GTGAAAATGAGTACACCGGT+AGG | - | chr2_2:68904169-68904188 | None:intergenic | 45.0% | |
| GGAAGCAAGTAGAAACGGAA+TGG | + | chr2_2:68904345-68904364 | Msa0267330:intron | 45.0% | |
| ! | TCTTTAGGAATCGAAGCTCG+AGG | + | chr2_2:68904527-68904546 | Msa0267330:intron | 45.0% |
| GAGCAAAGTTTGTACCGTTG+AGG | + | chr2_2:68904585-68904604 | Msa0267330:CDS | 45.0% | |
| AGGAAACCAAAGAAGTTGCC+TGG | + | chr2_2:68904605-68904624 | Msa0267330:CDS | 45.0% | |
| TTGCATAGGCAATGCTATGC+AGG | - | chr2_2:68904830-68904849 | None:intergenic | 45.0% | |
| CTTTCCAAGGCACAAACACA+AGG | - | chr2_2:68904990-68905009 | None:intergenic | 45.0% | |
| GGAATATGGAAGGGATTGTC+TGG | + | chr2_2:68905551-68905570 | Msa0267330:CDS | 45.0% | |
| GATTGTCTGGAGATGCATGT+TGG | + | chr2_2:68905564-68905583 | Msa0267330:CDS | 45.0% | |
| GGTGCAGCTATGGATTTACT+TGG | + | chr2_2:68905651-68905670 | Msa0267330:CDS | 45.0% | |
| CATGTGAATACGTACGTGAC+AGG | + | chr2_2:68906560-68906579 | Msa0267330:intron | 45.0% | |
| AGGGTCGTGAACGTTTGAAT+GGG | + | chr2_2:68906580-68906599 | Msa0267330:intron | 45.0% | |
| !!! | TATATAAACTAAATTTTAAA+CGG | - | chr2_2:68902752-68902771 | None:intergenic | 5.0% |
| !!! | ATTATTATATTATAATTTGT+GGG | + | chr2_2:68903151-68903170 | Msa0267330:intron | 5.0% |
| !!! | TTTTTTTTTTGTTAAATATA+AGG | - | chr2_2:68906356-68906375 | None:intergenic | 5.0% |
| !!! | ATAAATTTTATTAGAAAAAT+GGG | - | chr2_2:68906822-68906841 | None:intergenic | 5.0% |
| GGGGATCCTGGTTATGGTTA+GGG | - | chr2_2:68902169-68902188 | None:intergenic | 50.0% | |
| !! | GTTTTGATGCCATGGAGACG+GGG | - | chr2_2:68902188-68902207 | None:intergenic | 50.0% |
| ACAATGAGGTCTAGCGCAAG+TGG | + | chr2_2:68903556-68903575 | Msa0267330:intron | 50.0% | |
| GCTCCTATTGCTAGGGCAAT+GGG | - | chr2_2:68904569-68904588 | None:intergenic | 50.0% | |
| TGCTCCTATTGCTAGGGCAA+TGG | - | chr2_2:68904570-68904589 | None:intergenic | 50.0% | |
| CATGTTGGAGCTGTTGAAGC+TGG | + | chr2_2:68905579-68905598 | Msa0267330:CDS | 50.0% | |
| ! | AGCTGGTGAACGTGCTATTG+TGG | + | chr2_2:68905596-68905615 | Msa0267330:CDS | 50.0% |
| ATTGCAACTGGTGGAACGCT+CGG | + | chr2_2:68905630-68905649 | Msa0267330:CDS | 50.0% | |
| ! | TTTAGAACGTGTGGGAGCAG+AGG | + | chr2_2:68906192-68906211 | Msa0267330:intron | 50.0% |
| CAGGGTCGTGAACGTTTGAA+TGG | + | chr2_2:68906579-68906598 | Msa0267330:intron | 50.0% | |
| TGAGACGAGAGAGACCCAAA+GGG | - | chr2_2:68906789-68906808 | None:intergenic | 50.0% | |
| ATGAGACGAGAGAGACCCAA+AGG | - | chr2_2:68906790-68906809 | None:intergenic | 50.0% | |
| CGGGGATCCTGGTTATGGTT+AGG | - | chr2_2:68902170-68902189 | None:intergenic | 55.0% | |
| TTGAAGGTGGTAGGGGTCCA+TGG | + | chr2_2:68902627-68902646 | Msa0267330:intron | 55.0% | |
| CCTATTGCTAGGGCAATGGG+AGG | - | chr2_2:68904566-68904585 | None:intergenic | 55.0% | |
| CCTCCCATTGCCCTAGCAAT+AGG | + | chr2_2:68904563-68904582 | Msa0267330:CDS | 55.0% | |
| TGGGAAGCCGTTGTACGTGT+TGG | + | chr2_2:68906599-68906618 | Msa0267330:CDS | 55.0% | |
| GAAGCCGTTGTACGTGTTGG+TGG | + | chr2_2:68906602-68906621 | Msa0267330:CDS | 55.0% | |
| ACGAGAGAGACCCAAAGGGT+GGG | - | chr2_2:68906785-68906804 | None:intergenic | 55.0% | |
| GAAAACTGGGCCCAGACTAG+AGG | + | chr2_2:68906856-68906875 | Msa0267330:three_prime_UTR | 55.0% | |
| GGAGACGGGGATCCTGGTTA+TGG | - | chr2_2:68902175-68902194 | None:intergenic | 60.0% | |
| AACCAGGATCCCCGTCTCCA+TGG | + | chr2_2:68902176-68902195 | Msa0267330:CDS | 60.0% | |
| !! | TGGAACGCTCGGTGCAGCTA+TGG | + | chr2_2:68905641-68905660 | Msa0267330:CDS | 60.0% |
| ACGTGTGGGAGCAGAGGTAG+TGG | + | chr2_2:68906198-68906217 | Msa0267330:CDS | 60.0% | |
| GACGAGAGAGACCCAAAGGG+TGG | - | chr2_2:68906786-68906805 | None:intergenic | 60.0% | |
| AACTGGGCCCAGACTAGAGG+TGG | + | chr2_2:68906859-68906878 | Msa0267330:three_prime_UTR | 60.0% | |
| TGCCATGGAGACGGGGATCC+TGG | - | chr2_2:68902181-68902200 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 68902102 | 68906980 | 68902102 | ID=Msa0267330;Name=Msa0267330 |
| chr2_2 | mRNA | 68902102 | 68906980 | 68902102 | ID=Msa0267330-mRNA-1;Parent=Msa0267330;Name=Msa0267330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=53|1|1|1|1|1|6|339|186 |
| chr2_2 | exon | 68902102 | 68902242 | 68902102 | ID=Msa0267330-mRNA-1:exon:21885;Parent=Msa0267330-mRNA-1 |
| chr2_2 | exon | 68902408 | 68902518 | 68902408 | ID=Msa0267330-mRNA-1:exon:21886;Parent=Msa0267330-mRNA-1 |
| chr2_2 | exon | 68904534 | 68904626 | 68904534 | ID=Msa0267330-mRNA-1:exon:21887;Parent=Msa0267330-mRNA-1 |
| chr2_2 | exon | 68905523 | 68905672 | 68905523 | ID=Msa0267330-mRNA-1:exon:21888;Parent=Msa0267330-mRNA-1 |
| chr2_2 | exon | 68906197 | 68906255 | 68906197 | ID=Msa0267330-mRNA-1:exon:21889;Parent=Msa0267330-mRNA-1 |
| chr2_2 | exon | 68906582 | 68906980 | 68906582 | ID=Msa0267330-mRNA-1:exon:21890;Parent=Msa0267330-mRNA-1 |
| chr2_2 | five_prime_UTR | 68902102 | 68902154 | 68902102 | ID=Msa0267330-mRNA-1:five_prime_utr;Parent=Msa0267330-mRNA-1 |
| chr2_2 | CDS | 68902155 | 68902242 | 68902155 | ID=Msa0267330-mRNA-1:cds;Parent=Msa0267330-mRNA-1 |
| chr2_2 | CDS | 68902408 | 68902518 | 68902408 | ID=Msa0267330-mRNA-1:cds;Parent=Msa0267330-mRNA-1 |
| chr2_2 | CDS | 68904534 | 68904626 | 68904534 | ID=Msa0267330-mRNA-1:cds;Parent=Msa0267330-mRNA-1 |
| chr2_2 | CDS | 68905523 | 68905672 | 68905523 | ID=Msa0267330-mRNA-1:cds;Parent=Msa0267330-mRNA-1 |
| chr2_2 | CDS | 68906197 | 68906255 | 68906197 | ID=Msa0267330-mRNA-1:cds;Parent=Msa0267330-mRNA-1 |
| chr2_2 | CDS | 68906582 | 68906641 | 68906582 | ID=Msa0267330-mRNA-1:cds;Parent=Msa0267330-mRNA-1 |
| chr2_2 | three_prime_UTR | 68906642 | 68906980 | 68906642 | ID=Msa0267330-mRNA-1:three_prime_utr;Parent=Msa0267330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
