Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754220 | sp|Q9SUW2|APT3_ARATH | 83.425 | 181 | 30 | 0 | 3 | 183 | 2 | 182 | 1.17e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754220 | G7JW03 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 4.60e-128 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0639260 | Msa0754220 | 0.835083 | 2.062703e-56 | -8.615850e-47 |
| Msa0754220 | Msa0795950 | 0.919429 | 4.553923e-87 | -8.615850e-47 |
| Msa0754220 | Msa1132910 | 0.929436 | 6.965361e-93 | -8.615850e-47 |
| Msa0267330 | Msa0754220 | 0.951984 | 6.405854e-110 | -8.615850e-47 |
| Msa0560650 | Msa0754220 | 0.808445 | 3.085809e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754220 | MtrunA17_Chr5g0399031 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 8.85e-132 | 367 |
| Msa0754220 | MtrunA17_Chr4g0056471 | 89.189 | 185 | 18 | 1 | 1 | 185 | 1 | 183 | 4.86e-116 | 327 |
| Msa0754220 | MtrunA17_Chr3g0134721 | 78.531 | 177 | 38 | 0 | 6 | 182 | 66 | 242 | 8.83e-101 | 290 |
| Msa0754220 | MtrunA17_Chr3g0137551 | 73.988 | 173 | 45 | 0 | 10 | 182 | 11 | 183 | 4.04e-90 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754220 | AT4G22570.1 | 83.425 | 181 | 30 | 0 | 3 | 183 | 2 | 182 | 1.19e-106 | 303 |
| Msa0754220 | AT4G12440.3 | 84.270 | 178 | 28 | 0 | 6 | 183 | 4 | 181 | 7.00e-106 | 301 |
| Msa0754220 | AT4G12440.2 | 84.270 | 178 | 28 | 0 | 6 | 183 | 4 | 181 | 7.00e-106 | 301 |
| Msa0754220 | AT1G27450.2 | 77.586 | 174 | 39 | 0 | 9 | 182 | 7 | 180 | 4.49e-96 | 276 |
| Msa0754220 | AT1G27450.4 | 77.586 | 174 | 39 | 0 | 9 | 182 | 7 | 180 | 4.49e-96 | 276 |
| Msa0754220 | AT1G27450.1 | 77.586 | 174 | 39 | 0 | 9 | 182 | 67 | 240 | 8.20e-96 | 278 |
| Msa0754220 | AT5G11160.1 | 77.457 | 173 | 39 | 0 | 10 | 182 | 11 | 183 | 1.46e-92 | 268 |
| Msa0754220 | AT1G80050.1 | 74.566 | 173 | 44 | 0 | 10 | 182 | 11 | 183 | 3.21e-92 | 267 |
| Msa0754220 | AT1G27450.3 | 67.839 | 199 | 39 | 1 | 9 | 182 | 83 | 281 | 1.80e-89 | 263 |
| Msa0754220 | AT1G80050.2 | 76.159 | 151 | 36 | 0 | 32 | 182 | 1 | 151 | 4.76e-81 | 238 |
| Msa0754220 | AT5G11160.2 | 77.536 | 138 | 31 | 0 | 10 | 147 | 11 | 148 | 2.53e-72 | 216 |
| Msa0754220 | AT4G22570.2 | 82.178 | 101 | 18 | 0 | 6 | 106 | 5 | 105 | 5.43e-55 | 170 |
| Msa0754220 | AT4G12440.1 | 88.172 | 93 | 11 | 0 | 6 | 98 | 4 | 96 | 2.13e-53 | 166 |
| Msa0754220 | AT4G12440.4 | 88.172 | 93 | 11 | 0 | 6 | 98 | 4 | 96 | 2.13e-53 | 166 |
Find 74 sgRNAs with CRISPR-Local
Find 491 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCAGCTTTAGGGAAATT+AGG | 0.183357 | 5_2:-7758014 | None:intergenic |
| GCATTATTTACTATATTATA+TGG | 0.235159 | 5_2:+7765365 | Msa0754220:three_prime_UTR |
| CAAGAATATATTCTGGAATA+TGG | 0.262836 | 5_2:+7763909 | Msa0754220:CDS |
| ATACAATCAAATTATGGATT+TGG | 0.266097 | 5_2:+7765109 | Msa0754220:three_prime_UTR |
| CGTCCCATACAATCAAATTA+TGG | 0.278879 | 5_2:+7765103 | Msa0754220:three_prime_UTR |
| AAACAGAACAAACCAGCTTT+AGG | 0.286654 | 5_2:-7758023 | None:intergenic |
| AGTATACCAGGCAACTTCTT+TGG | 0.298599 | 5_2:-7762965 | None:intergenic |
| AATCGTGTCCTTAAAAGCTT+TGG | 0.304890 | 5_2:-7758237 | None:intergenic |
| TTTATAAGCCACCTCTAGTC+TGG | 0.325716 | 5_2:-7765309 | None:intergenic |
| TACAATCAAATTATGGATTT+GGG | 0.330287 | 5_2:+7765110 | Msa0754220:three_prime_UTR |
| CATACTACAAGCTAATTAGA+TGG | 0.343120 | 5_2:-7765169 | None:intergenic |
| ATATGAGCTGCTCGTGAATA+TGG | 0.346111 | 5_2:+7765078 | Msa0754220:exon |
| AAATCCATAATTTGATTGTA+TGG | 0.354557 | 5_2:-7765107 | None:intergenic |
| AACCAGCTTTAGGGAAATTA+GGG | 0.373142 | 5_2:-7758013 | None:intergenic |
| GCTCCTATTGCTAGGGCAAT+GGG | 0.388468 | 5_2:-7762920 | None:intergenic |
| AATTTGTATGACCCACCCTT+TGG | 0.390878 | 5_2:+7765213 | Msa0754220:three_prime_UTR |
| AGACATAACAACTTTGTTGC+TGG | 0.393391 | 5_2:+7758211 | Msa0754220:CDS |
| CGGGGATCCTGGTTATGGTT+AGG | 0.395044 | 5_2:-7757957 | None:intergenic |
| CCTCCCATTGCCCTAGCAAT+AGG | 0.399883 | 5_2:+7762917 | Msa0754220:CDS |
| TGAGTACAGAGAAGAGGAAG+AGG | 0.400474 | 5_2:-7757903 | None:intergenic |
| AACAGAACAAACCAGCTTTA+GGG | 0.408090 | 5_2:-7758022 | None:intergenic |
| AATACACATACCTTCAGTTC+TGG | 0.411464 | 5_2:-7764684 | None:intergenic |
| GTTGATGATTTGATTGCAAC+TGG | 0.419866 | 5_2:+7763990 | Msa0754220:CDS |
| ATCGTGTCCTTAAAAGCTTT+GGG | 0.421866 | 5_2:-7758236 | None:intergenic |
| TATATCTCAAGAATATATTC+TGG | 0.424805 | 5_2:+7763902 | Msa0754220:CDS |
| ATTTGTATGACCCACCCTTT+GGG | 0.430577 | 5_2:+7765214 | Msa0754220:three_prime_UTR |
| GCAACAAAGTTGTTATGTCT+TGG | 0.434670 | 5_2:-7758208 | None:intergenic |
| GGAGACGGGGATCCTGGTTA+TGG | 0.440718 | 5_2:-7757962 | None:intergenic |
| CAGGGTCGTGAACGTTTGAA+TGG | 0.446474 | 5_2:+7765021 | Msa0754220:intron |
| GTCCCTAATTTCCCTAAAGC+TGG | 0.449348 | 5_2:+7758011 | Msa0754220:CDS |
| GGAGCTTAATTTAGTGAAGA+AGG | 0.449747 | 5_2:+7765340 | Msa0754220:three_prime_UTR |
| TGCTCCTATTGCTAGGGCAA+TGG | 0.450009 | 5_2:-7762921 | None:intergenic |
| GGAATATGGAAGGGATTGTC+TGG | 0.452778 | 5_2:+7763923 | Msa0754220:CDS |
| ATTTGGGAGATGTCATTTAG+TGG | 0.454410 | 5_2:+7765126 | Msa0754220:three_prime_UTR |
| TGCCATGGAGACGGGGATCC+TGG | 0.460160 | 5_2:-7757968 | None:intergenic |
| ACGTGTCGGAGCAGAGGTAG+TGG | 0.480614 | 5_2:+7764638 | Msa0754220:CDS |
| CAAACTTTGCTCCTATTGCT+AGG | 0.482941 | 5_2:-7762928 | None:intergenic |
| GTGAGTTGAGTACAGAGAAG+AGG | 0.493402 | 5_2:-7757909 | None:intergenic |
| TGGAACGCTCGGTGCAGCTA+TGG | 0.495730 | 5_2:+7764013 | Msa0754220:CDS |
| AATCCATAATTTGATTGTAT+GGG | 0.503655 | 5_2:-7765106 | None:intergenic |
| TTTGTTTGTTGAGCGTTACA+AGG | 0.505554 | 5_2:+7758262 | Msa0754220:CDS |
| GGGGATCCTGGTTATGGTTA+GGG | 0.510107 | 5_2:-7757956 | None:intergenic |
| AACTTCTTTGGTTTCCTCAA+CGG | 0.516612 | 5_2:-7762953 | None:intergenic |
| AGGAAACCAAAGAAGTTGCC+TGG | 0.536887 | 5_2:+7762959 | Msa0754220:CDS |
| CATGTTGGAGCTGTTGAAGC+TGG | 0.538546 | 5_2:+7763951 | Msa0754220:CDS |
| AATATATTCTGGAATATGGA+AGG | 0.538905 | 5_2:+7763913 | Msa0754220:CDS |
| GGTGCAGCTATGGATTTACT+TGG | 0.542272 | 5_2:+7764023 | Msa0754220:CDS |
| AACCAGGATCCCCGTCTCCA+TGG | 0.548404 | 5_2:+7757966 | Msa0754220:CDS |
| ATTGCAACTGGTGGAACGCT+CGG | 0.559268 | 5_2:+7764002 | Msa0754220:CDS |
| AGGGTCGTGAACGTTTGAAT+GGG | 0.559366 | 5_2:+7765022 | Msa0754220:intron |
| AAACTTTGCTCCTATTGCTA+GGG | 0.561475 | 5_2:-7762927 | None:intergenic |
| GAAGCCGTTGTACGTGTTGG+TGG | 0.568047 | 5_2:+7765044 | Msa0754220:CDS |
| ATACTACAAGCTAATTAGAT+GGG | 0.571753 | 5_2:-7765168 | None:intergenic |
| ATGAGACGAGAGAGACCCAA+AGG | 0.574212 | 5_2:-7765229 | None:intergenic |
| TTATAAGCCACCTCTAGTCT+GGG | 0.578321 | 5_2:-7765308 | None:intergenic |
| AACTGGGCCCAGACTAGAGG+TGG | 0.593639 | 5_2:+7765301 | Msa0754220:three_prime_UTR |
| TTATTTACTATATTATATGG+TGG | 0.594062 | 5_2:+7765368 | Msa0754220:three_prime_UTR |
| GACGAGAGAGACCCAAAGGG+TGG | 0.599552 | 5_2:-7765225 | None:intergenic |
| GAAAACTGGGCCCAGACTAG+AGG | 0.599698 | 5_2:+7765298 | Msa0754220:three_prime_UTR |
| GAGCAAAGTTTGTACCGTTG+AGG | 0.600941 | 5_2:+7762939 | Msa0754220:CDS |
| TTGTTTGTTGAGCGTTACAA+GGG | 0.607295 | 5_2:+7758263 | Msa0754220:CDS |
| ATATATTCTGGAATATGGAA+GGG | 0.616454 | 5_2:+7763914 | Msa0754220:CDS |
| AATTGAATTACCAGAACTGA+AGG | 0.617672 | 5_2:+7764674 | Msa0754220:CDS |
| TCTTTAGGAATCGAAGCTCG+AGG | 0.622592 | 5_2:+7762881 | Msa0754220:intron |
| GATGATTTGATTGCAACTGG+TGG | 0.623926 | 5_2:+7763993 | Msa0754220:CDS |
| GATTGTCTGGAGATGCATGT+TGG | 0.625993 | 5_2:+7763936 | Msa0754220:CDS |
| TTTAGAACGTGTCGGAGCAG+AGG | 0.626121 | 5_2:+7764632 | Msa0754220:intron |
| TGAGACGAGAGAGACCCAAA+GGG | 0.626189 | 5_2:-7765228 | None:intergenic |
| TGGGAAGCCGTTGTACGTGT+TGG | 0.631023 | 5_2:+7765041 | Msa0754220:CDS |
| TATTCCACCAACACGTACAA+CGG | 0.631070 | 5_2:-7765048 | None:intergenic |
| ACGAGAGAGACCCAAAGGGT+GGG | 0.632924 | 5_2:-7765224 | None:intergenic |
| AGCTGGTGAACGTGCTATTG+TGG | 0.633448 | 5_2:+7763968 | Msa0754220:CDS |
| GTCTTACCCTAACCATAACC+AGG | 0.656381 | 5_2:+7757950 | Msa0754220:CDS |
| CCTATTGCTAGGGCAATGGG+AGG | 0.682237 | 5_2:-7762917 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATATGAATCAAA+GGG | - | chr5_2:7758087-7758106 | None:intergenic | 10.0% |
| !! | AAAAATAAAATATGAATCAA+AGG | - | chr5_2:7758088-7758107 | None:intergenic | 10.0% |
| !!! | ATTTTTTAACTGAAAAAAAA+TGG | + | chr5_2:7758328-7758347 | Msa0754220:intron | 10.0% |
| !!! | TTTTATTTTGCATATATTTT+TGG | - | chr5_2:7758499-7758518 | None:intergenic | 10.0% |
| !!! | TATATAAACTAAATTTTAAG+CGG | - | chr5_2:7758544-7758563 | None:intergenic | 10.0% |
| !!! | ATTATAATATAATAATGGAA+TGG | - | chr5_2:7758937-7758956 | None:intergenic | 10.0% |
| !! | CACAAATTATAATATAATAA+TGG | - | chr5_2:7758942-7758961 | None:intergenic | 10.0% |
| !! | CATTATTATATTATAATTTG+TGG | + | chr5_2:7758940-7758959 | Msa0754220:intron | 10.0% |
| !!! | TTGATGTTTTTTTAAAATAA+GGG | - | chr5_2:7759202-7759221 | None:intergenic | 10.0% |
| !!! | TTTGATGTTTTTTTAAAATA+AGG | - | chr5_2:7759203-7759222 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAATAATTCCA+AGG | - | chr5_2:7762109-7762128 | None:intergenic | 10.0% |
| !!! | AAATTTTATTAGAAAAATGA+GGG | - | chr5_2:7765262-7765281 | None:intergenic | 10.0% |
| !!! | TAAATTTTATTAGAAAAATG+AGG | - | chr5_2:7765263-7765282 | None:intergenic | 10.0% |
| !! | AAATAAAATATGAATCAAAG+GGG | - | chr5_2:7758086-7758105 | None:intergenic | 15.0% |
| !!! | TTTTAAAATAAGGGTAAAAT+TGG | - | chr5_2:7759193-7759212 | None:intergenic | 15.0% |
| !!! | AATTGATGACATATTTATAA+GGG | + | chr5_2:7760497-7760516 | Msa0754220:intron | 15.0% |
| !! | TCATAAAAATGAACAAAAAT+GGG | - | chr5_2:7761023-7761042 | None:intergenic | 15.0% |
| !! | TATTGAAAATATAATTCATC+AGG | + | chr5_2:7761514-7761533 | Msa0754220:intron | 15.0% |
| !!! | TTTTTTCTTGTTGAAAAATT+TGG | + | chr5_2:7761595-7761614 | Msa0754220:intron | 15.0% |
| !!! | ATTATTTTAAAAAAATTCCC+AGG | + | chr5_2:7762113-7762132 | Msa0754220:intron | 15.0% |
| !!! | AAAATATAGAAAAAAGTGTT+TGG | - | chr5_2:7762153-7762172 | None:intergenic | 15.0% |
| !! | ATTTAATTGTTTATCAAATC+AGG | + | chr5_2:7762414-7762433 | Msa0754220:intron | 15.0% |
| !! | TTTCCATTGAAATATATAAA+TGG | - | chr5_2:7762641-7762660 | None:intergenic | 15.0% |
| !!! | ATTACGTATAAATAATTTGT+AGG | - | chr5_2:7763470-7763489 | None:intergenic | 15.0% |
| !!! | TAAAACAATTCATATGATTT+TGG | - | chr5_2:7763557-7763576 | None:intergenic | 15.0% |
| !! | TTTGTTACTATAAAGAAAAT+GGG | - | chr5_2:7763861-7763880 | None:intergenic | 15.0% |
| !!! | TTTTGTTACTATAAAGAAAA+TGG | - | chr5_2:7763862-7763881 | None:intergenic | 15.0% |
| !! | TTATTAAAAGTTTCTCAATT+AGG | - | chr5_2:7764249-7764268 | None:intergenic | 15.0% |
| !!! | GTTTGAAATATTAAAAGAAT+CGG | + | chr5_2:7764281-7764300 | Msa0754220:intron | 15.0% |
| !! | TTAAAAACTGCATTTAAATT+TGG | - | chr5_2:7764404-7764423 | None:intergenic | 15.0% |
| !! | AAAAGACATCAATATAATAA+AGG | - | chr5_2:7764614-7764633 | None:intergenic | 15.0% |
| !! | GCATTATTTACTATATTATA+TGG | + | chr5_2:7765365-7765384 | Msa0754220:three_prime_UTR | 15.0% |
| !! | TTATTTACTATATTATATGG+TGG | + | chr5_2:7765368-7765387 | Msa0754220:three_prime_UTR | 15.0% |
| !!! | AAGCTTTATTTTTTGTTTTG+AGG | + | chr5_2:7758117-7758136 | Msa0754220:intron | 20.0% |
| !!! | TTATTTATTTTGTTTGAACG+TGG | + | chr5_2:7758370-7758389 | Msa0754220:intron | 20.0% |
| !!! | TATTTATTTTGTTTGAACGT+GGG | + | chr5_2:7758371-7758390 | Msa0754220:intron | 20.0% |
| !! | TTTGGATAAGTTAAAACTAA+CGG | + | chr5_2:7759009-7759028 | Msa0754220:intron | 20.0% |
| !!! | TAATTTTTCATTCCATTGTT+TGG | + | chr5_2:7759130-7759149 | Msa0754220:intron | 20.0% |
| !! | AAGCAAAAATTTATTGGTAA+AGG | + | chr5_2:7759422-7759441 | Msa0754220:intron | 20.0% |
| !! | AAAATTGGGAATGAAAAATA+AGG | + | chr5_2:7759587-7759606 | Msa0754220:intron | 20.0% |
| !!! | ATTGTTTGGTTTTGTAAATA+AGG | - | chr5_2:7759743-7759762 | None:intergenic | 20.0% |
| !! | TTATTTACAAAACCAAACAA+TGG | + | chr5_2:7759742-7759761 | Msa0754220:intron | 20.0% |
| !! | AATTAACTATTGATACAATG+AGG | + | chr5_2:7760157-7760176 | Msa0754220:intron | 20.0% |
| !! | AAAAGAGATTCAAATAAACA+CGG | - | chr5_2:7760317-7760336 | None:intergenic | 20.0% |
| !!! | CAATTGATGACATATTTATA+AGG | + | chr5_2:7760496-7760515 | Msa0754220:intron | 20.0% |
| !!! | ATTGATGACATATTTATAAG+GGG | + | chr5_2:7760498-7760517 | Msa0754220:intron | 20.0% |
| !!! | CTTTTTATACAGAATATCAT+GGG | - | chr5_2:7760820-7760839 | None:intergenic | 20.0% |
| !! | AGAATTAAGATGAAATTAGA+TGG | - | chr5_2:7760917-7760936 | None:intergenic | 20.0% |
| !! | CTCATAAAAATGAACAAAAA+TGG | - | chr5_2:7761024-7761043 | None:intergenic | 20.0% |
| !!! | TTTGAATTCTTTTACTCTAT+TGG | + | chr5_2:7761435-7761454 | Msa0754220:intron | 20.0% |
| !! | ACAATTTAAACATAAAGACA+AGG | - | chr5_2:7761666-7761685 | None:intergenic | 20.0% |
| !!! | AGTATTTTGTGACAAAATAT+TGG | + | chr5_2:7761688-7761707 | Msa0754220:intron | 20.0% |
| !!! | GTTTTATGTTTTTAATACAC+AGG | + | chr5_2:7761710-7761729 | Msa0754220:intron | 20.0% |
| !!! | ATGACTCTAAAATTTGTATT+TGG | + | chr5_2:7761781-7761800 | Msa0754220:intron | 20.0% |
| !! | TAATTATAACATTTATTCCC+AGG | + | chr5_2:7762048-7762067 | Msa0754220:intron | 20.0% |
| !! | TTAAAATAATTCCAAGGAAT+AGG | - | chr5_2:7762103-7762122 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTATATTTTCCT+GGG | + | chr5_2:7762156-7762175 | Msa0754220:intron | 20.0% |
| !!! | TTGTATAGTAGTAGATATTT+TGG | + | chr5_2:7762569-7762588 | Msa0754220:intron | 20.0% |
| !! | GTACCATTTATATATTTCAA+TGG | + | chr5_2:7762635-7762654 | Msa0754220:intron | 20.0% |
| !! | GTAGAACATTTAAACTTAAT+TGG | - | chr5_2:7763091-7763110 | None:intergenic | 20.0% |
| !!! | ATAACTTTTGTTCAAAATTC+AGG | - | chr5_2:7763528-7763547 | None:intergenic | 20.0% |
| !! | TTGTTCAGAAACTAATTTAA+CGG | + | chr5_2:7763606-7763625 | Msa0754220:intron | 20.0% |
| !! | TTATTTGTTTATCAGTTATG+TGG | + | chr5_2:7763710-7763729 | Msa0754220:intron | 20.0% |
| !! | TATATCTCAAGAATATATTC+TGG | + | chr5_2:7763902-7763921 | Msa0754220:CDS | 20.0% |
| !!! | TTTAGAGTAAACCATTAAAT+TGG | - | chr5_2:7764335-7764354 | None:intergenic | 20.0% |
| !! | TAACATGTAAATTTCAAACT+CGG | - | chr5_2:7764451-7764470 | None:intergenic | 20.0% |
| !!! | TTTTAACTATATTGATGTCT+TGG | + | chr5_2:7764545-7764564 | Msa0754220:intron | 20.0% |
| !! | AATCCATAATTTGATTGTAT+GGG | - | chr5_2:7765109-7765128 | None:intergenic | 20.0% |
| !! | AAATCCATAATTTGATTGTA+TGG | - | chr5_2:7765110-7765129 | None:intergenic | 20.0% |
| !! | ATACAATCAAATTATGGATT+TGG | + | chr5_2:7765109-7765128 | Msa0754220:three_prime_UTR | 20.0% |
| !! | TACAATCAAATTATGGATTT+GGG | + | chr5_2:7765110-7765129 | Msa0754220:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTGTTGCAATGAC+AGG | + | chr5_2:7758176-7758195 | Msa0754220:intron | 25.0% |
| !! | AAAAATATTTCTGTTGTTGC+AGG | + | chr5_2:7758287-7758306 | Msa0754220:CDS | 25.0% |
| ! | AAACTTGACAAAACAATCAA+TGG | - | chr5_2:7758782-7758801 | None:intergenic | 25.0% |
| ! | ATAAGTTAAAACTAACGGAA+TGG | + | chr5_2:7759014-7759033 | Msa0754220:intron | 25.0% |
| ! | AAACATTCCATTCTATTGTT+TGG | + | chr5_2:7759085-7759104 | Msa0754220:intron | 25.0% |
| !! | AAAGTATCCAAACAATAGAA+TGG | - | chr5_2:7759095-7759114 | None:intergenic | 25.0% |
| ! | ATTGTTTGGATACTTTATGA+TGG | + | chr5_2:7759099-7759118 | Msa0754220:intron | 25.0% |
| !!! | AGTACTTTTTTTTAGTAGCA+TGG | - | chr5_2:7759331-7759350 | None:intergenic | 25.0% |
| ! | TGCTACAAGCAAAAATTTAT+TGG | + | chr5_2:7759416-7759435 | Msa0754220:intron | 25.0% |
| ! | TCAAACATAAATACAGATGA+AGG | + | chr5_2:7759480-7759499 | Msa0754220:intron | 25.0% |
| ! | AGAAGTGAAGAAAAAAGAAA+TGG | + | chr5_2:7759550-7759569 | Msa0754220:intron | 25.0% |
| ! | GAAGTGAAGAAAAAAGAAAT+GGG | + | chr5_2:7759551-7759570 | Msa0754220:intron | 25.0% |
| ! | GGAATGAAAATTTGGTTAAA+TGG | + | chr5_2:7759670-7759689 | Msa0754220:intron | 25.0% |
| ! | TGAAAATTTGGTTAAATGGA+TGG | + | chr5_2:7759674-7759693 | Msa0754220:intron | 25.0% |
| ! | TTTGTAAATAAGGAATGGAA+TGG | - | chr5_2:7759733-7759752 | None:intergenic | 25.0% |
| !!! | TTGGTTTTGTAAATAAGGAA+TGG | - | chr5_2:7759738-7759757 | None:intergenic | 25.0% |
| ! | AAATAGTACAAAGAACGAAA+GGG | - | chr5_2:7759898-7759917 | None:intergenic | 25.0% |
| ! | AAAATAGTACAAAGAACGAA+AGG | - | chr5_2:7759899-7759918 | None:intergenic | 25.0% |
| ! | AAAATGAACAAGAACACTAT+TGG | + | chr5_2:7759928-7759947 | Msa0754220:intron | 25.0% |
| ! | TACTATGCTCATAGTTATTT+GGG | + | chr5_2:7760005-7760024 | Msa0754220:intron | 25.0% |
| ! | ATTATAGACTCCAATATTAG+AGG | + | chr5_2:7760094-7760113 | Msa0754220:intron | 25.0% |
| ! | GTTTGTAAGAATCATGAAAA+AGG | + | chr5_2:7760206-7760225 | Msa0754220:intron | 25.0% |
| !! | TGGACTATTTCTTTAATGTT+TGG | + | chr5_2:7760381-7760400 | Msa0754220:intron | 25.0% |
| ! | TGAGTTTATCTAGTTACATA+AGG | + | chr5_2:7760440-7760459 | Msa0754220:intron | 25.0% |
| !! | TTGATGACATATTTATAAGG+GGG | + | chr5_2:7760499-7760518 | Msa0754220:intron | 25.0% |
| !! | ATATTCCTTTGTTTGATAGA+TGG | + | chr5_2:7760575-7760594 | Msa0754220:intron | 25.0% |
| !! | TATTCCTTTGTTTGATAGAT+GGG | + | chr5_2:7760576-7760595 | Msa0754220:intron | 25.0% |
| ! | GAATAAAAGACAGGAAAAAT+GGG | - | chr5_2:7760674-7760693 | None:intergenic | 25.0% |
| !! | GCTTTTTATACAGAATATCA+TGG | - | chr5_2:7760821-7760840 | None:intergenic | 25.0% |
| ! | GATGAACACACAAAAATAAT+GGG | - | chr5_2:7760846-7760865 | None:intergenic | 25.0% |
| ! | TGATGAACACACAAAAATAA+TGG | - | chr5_2:7760847-7760866 | None:intergenic | 25.0% |
| !!! | GATATCAATTCTCTGTTTTT+TGG | + | chr5_2:7760965-7760984 | Msa0754220:intron | 25.0% |
| !!! | TCATATTTTTTTCCACTGTT+TGG | + | chr5_2:7761064-7761083 | Msa0754220:intron | 25.0% |
| !!! | TTTTAGGAAAAGTTAGAAGA+AGG | - | chr5_2:7761164-7761183 | None:intergenic | 25.0% |
| !! | CATGGTTATTAGCATATTTT+AGG | - | chr5_2:7761180-7761199 | None:intergenic | 25.0% |
| !! | GTTTTACATACAAAGAATTC+AGG | - | chr5_2:7761205-7761224 | None:intergenic | 25.0% |
| ! | TTAGATAATATGTCACACTT+GGG | - | chr5_2:7761348-7761367 | None:intergenic | 25.0% |
| ! | AAAGTGAGATTTGTCAAATT+TGG | + | chr5_2:7761369-7761388 | Msa0754220:intron | 25.0% |
| ! | TACTAAAAAAGATAGCAGAT+TGG | + | chr5_2:7761549-7761568 | Msa0754220:intron | 25.0% |
| !!! | TCATTTTAACAGCAACTTTT+TGG | + | chr5_2:7761893-7761912 | Msa0754220:intron | 25.0% |
| ! | GTTTCATGGTTTATTCAATA+GGG | + | chr5_2:7762017-7762036 | Msa0754220:intron | 25.0% |
| ! | TTTCATGGTTTATTCAATAG+GGG | + | chr5_2:7762018-7762037 | Msa0754220:intron | 25.0% |
| ! | AGGAATAGGTAAAATATGTT+TGG | - | chr5_2:7762089-7762108 | None:intergenic | 25.0% |
| !! | AACATATTTTACCTATTCCT+TGG | + | chr5_2:7762089-7762108 | Msa0754220:intron | 25.0% |
| ! | TGGTTAATTGTTTAATTCCT+GGG | - | chr5_2:7762133-7762152 | None:intergenic | 25.0% |
| ! | TTGGTTAATTGTTTAATTCC+TGG | - | chr5_2:7762134-7762153 | None:intergenic | 25.0% |
| !!! | CACTTTTTTCTATATTTTCC+TGG | + | chr5_2:7762155-7762174 | Msa0754220:intron | 25.0% |
| ! | GAAATTGTGAATAATGTATG+AGG | + | chr5_2:7762454-7762473 | Msa0754220:intron | 25.0% |
| ! | CGTAGATTAAAAATTAGCAA+TGG | - | chr5_2:7762497-7762516 | None:intergenic | 25.0% |
| ! | ATTTCAATGGAAAACAATGA+AGG | + | chr5_2:7762648-7762667 | Msa0754220:intron | 25.0% |
| ! | AAGATTTAGAAATCCTCTAT+TGG | + | chr5_2:7762678-7762697 | Msa0754220:intron | 25.0% |
| ! | TTACTACTTTATAAACATGG+AGG | - | chr5_2:7762753-7762772 | None:intergenic | 25.0% |
| !! | GTGTTACTACTTTATAAACA+TGG | - | chr5_2:7762756-7762775 | None:intergenic | 25.0% |
| ! | CATTTAAACTTAATTGGTAG+AGG | - | chr5_2:7763085-7763104 | None:intergenic | 25.0% |
| ! | AAATAGTGAAGAATCAATTG+AGG | - | chr5_2:7763146-7763165 | None:intergenic | 25.0% |
| !! | TTGATTCTTCACTATTTTCA+TGG | + | chr5_2:7763149-7763168 | Msa0754220:intron | 25.0% |
| ! | AATAAATTGCACATTTGCAT+AGG | - | chr5_2:7763198-7763217 | None:intergenic | 25.0% |
| !!! | TAGTTTTATTCATAAACTGC+TGG | - | chr5_2:7763496-7763515 | None:intergenic | 25.0% |
| !!! | CAAGAATATATTCTGGAATA+TGG | + | chr5_2:7763909-7763928 | Msa0754220:CDS | 25.0% |
| !!! | AATATATTCTGGAATATGGA+AGG | + | chr5_2:7763913-7763932 | Msa0754220:CDS | 25.0% |
| !!! | ATATATTCTGGAATATGGAA+GGG | + | chr5_2:7763914-7763933 | Msa0754220:CDS | 25.0% |
| ! | TCTATATGTTCAGATGAAAT+CGG | + | chr5_2:7764079-7764098 | Msa0754220:intron | 25.0% |
| !!! | CTCAAAAGTTTTTAACTGTA+GGG | - | chr5_2:7764108-7764127 | None:intergenic | 25.0% |
| !!! | ACTCAAAAGTTTTTAACTGT+AGG | - | chr5_2:7764109-7764128 | None:intergenic | 25.0% |
| !! | ATTAGGTCTGTTTTATGTTT+TGG | - | chr5_2:7764232-7764251 | None:intergenic | 25.0% |
| ! | TCGGATACTAATATGAAAAT+AGG | + | chr5_2:7764300-7764319 | Msa0754220:intron | 25.0% |
| !! | TGGTTTACTCTAAAAAATCT+AGG | + | chr5_2:7764341-7764360 | Msa0754220:intron | 25.0% |
| ! | GCTTAATATAAAGATGAAAC+AGG | - | chr5_2:7764503-7764522 | None:intergenic | 25.0% |
| !! | AGTCAATATTGTTATTGATC+AGG | + | chr5_2:7764853-7764872 | Msa0754220:intron | 25.0% |
| ! | ATACTACAAGCTAATTAGAT+GGG | - | chr5_2:7765171-7765190 | None:intergenic | 25.0% |
| ! | ACATGACAAAAATGAAAACT+GGG | + | chr5_2:7765285-7765304 | Msa0754220:three_prime_UTR | 25.0% |
| CATCACTATTGTTATCTTGA+AGG | + | chr5_2:7758403-7758422 | Msa0754220:intron | 30.0% | |
| !! | TTTTGAGAGACATTATGCAA+TGG | + | chr5_2:7758684-7758703 | Msa0754220:intron | 30.0% |
| CTATAAGCTCTTGTAATTTG+TGG | + | chr5_2:7758743-7758762 | Msa0754220:intron | 30.0% | |
| ! | TCTTGTAATTTGTGGTTAGT+GGG | + | chr5_2:7758751-7758770 | Msa0754220:intron | 30.0% |
| ! | TTTTGTCAAGTTTTCTTCAG+CGG | + | chr5_2:7758789-7758808 | Msa0754220:intron | 30.0% |
| TGGAATCAATTTATCACCAA+TGG | - | chr5_2:7758851-7758870 | None:intergenic | 30.0% | |
| ! | TTGGATACTTTATGATGGAA+CGG | + | chr5_2:7759104-7759123 | Msa0754220:intron | 30.0% |
| TTCCATTGTTTGGAAATTGA+CGG | + | chr5_2:7759140-7759159 | Msa0754220:intron | 30.0% | |
| TTTAGTAGCATGGTATACAA+GGG | - | chr5_2:7759321-7759340 | None:intergenic | 30.0% | |
| ! | TTTTAGTAGCATGGTATACA+AGG | - | chr5_2:7759322-7759341 | None:intergenic | 30.0% |
| GCTAGCATTCATAAATTAGA+AGG | + | chr5_2:7759451-7759470 | Msa0754220:intron | 30.0% | |
| GAAGAAAAAAGAAATGGGAA+TGG | + | chr5_2:7759556-7759575 | Msa0754220:intron | 30.0% | |
| ! | ATTTTCATTCCACCCAATTT+GGG | - | chr5_2:7759661-7759680 | None:intergenic | 30.0% |
| ! | AATTTTCATTCCACCCAATT+TGG | - | chr5_2:7759662-7759681 | None:intergenic | 30.0% |
| AATTGGGTGGAATGAAAATT+TGG | + | chr5_2:7759662-7759681 | Msa0754220:intron | 30.0% | |
| TTTGGTTAAATGGATGGTAT+TGG | + | chr5_2:7759680-7759699 | Msa0754220:intron | 30.0% | |
| AAATAAGGAATGGAATGGAA+TGG | - | chr5_2:7759728-7759747 | None:intergenic | 30.0% | |
| TAAACTCTAAACCAGTACTT+AGG | - | chr5_2:7759830-7759849 | None:intergenic | 30.0% | |
| ATACAACTATGCATCTTGTT+TGG | + | chr5_2:7759864-7759883 | Msa0754220:intron | 30.0% | |
| AATAGTACAAAGAACGAAAG+GGG | - | chr5_2:7759897-7759916 | None:intergenic | 30.0% | |
| GTACTATGCTCATAGTTATT+TGG | + | chr5_2:7760004-7760023 | Msa0754220:intron | 30.0% | |
| ! | TTTCTTTTGTTAGACATACC+CGG | + | chr5_2:7760058-7760077 | Msa0754220:intron | 30.0% |
| TATAATTGAAGAGAAGCTTC+CGG | - | chr5_2:7760080-7760099 | None:intergenic | 30.0% | |
| ACAAATTCCTCCTCTAATAT+TGG | - | chr5_2:7760107-7760126 | None:intergenic | 30.0% | |
| ! | CTATTGCATTTTTAATGCGT+TGG | + | chr5_2:7760263-7760282 | Msa0754220:intron | 30.0% |
| !! | TTAATGCGTTGGTATTGTTT+TGG | + | chr5_2:7760274-7760293 | Msa0754220:intron | 30.0% |
| ! | TTTGAATCTCTTTTAGCATG+TGG | + | chr5_2:7760323-7760342 | Msa0754220:intron | 30.0% |
| AAATAATTCCCAGGAATCTA+AGG | + | chr5_2:7760542-7760561 | Msa0754220:intron | 30.0% | |
| TATTCCCATCTATCAAACAA+AGG | - | chr5_2:7760583-7760602 | None:intergenic | 30.0% | |
| GGAATAAAAGACAGGAAAAA+TGG | - | chr5_2:7760675-7760694 | None:intergenic | 30.0% | |
| AATCAGAGAAAAAGAATAGC+GGG | - | chr5_2:7760780-7760799 | None:intergenic | 30.0% | |
| GAATCAGAGAAAAAGAATAG+CGG | - | chr5_2:7760781-7760800 | None:intergenic | 30.0% | |
| GTGAAATCAATAAACCCAAT+TGG | - | chr5_2:7760878-7760897 | None:intergenic | 30.0% | |
| TCCATTACTCAACATAGATT+TGG | + | chr5_2:7760937-7760956 | Msa0754220:intron | 30.0% | |
| ACCAAATCTATGTTGAGTAA+TGG | - | chr5_2:7760941-7760960 | None:intergenic | 30.0% | |
| !!! | TTTTTGCATCGATTCATGAT+GGG | - | chr5_2:7761108-7761127 | None:intergenic | 30.0% |
| !!! | TTTTTTGCATCGATTCATGA+TGG | - | chr5_2:7761109-7761128 | None:intergenic | 30.0% |
| CATGAATCGATGCAAAAAAA+AGG | + | chr5_2:7761110-7761129 | Msa0754220:intron | 30.0% | |
| AATCGATGCAAAAAAAAGGT+TGG | + | chr5_2:7761114-7761133 | Msa0754220:intron | 30.0% | |
| GTATGTAAAACTTCAGCATA+TGG | + | chr5_2:7761214-7761233 | Msa0754220:intron | 30.0% | |
| CTTAGATAATATGTCACACT+TGG | - | chr5_2:7761349-7761368 | None:intergenic | 30.0% | |
| CAAAAACTTAAATGTGACAG+AGG | - | chr5_2:7761493-7761512 | None:intergenic | 30.0% | |
| !! | CTCTGTCACATTTAAGTTTT+TGG | + | chr5_2:7761491-7761510 | Msa0754220:intron | 30.0% |
| AAAAAAAAAGATTGCTGCAG+AGG | - | chr5_2:7761579-7761598 | None:intergenic | 30.0% | |
| ! | TTGAACCACACTTTTCTAAT+GGG | - | chr5_2:7761621-7761640 | None:intergenic | 30.0% |
| ! | ATTGAACCACACTTTTCTAA+TGG | - | chr5_2:7761622-7761641 | None:intergenic | 30.0% |
| TTAAACATAAAGACAAGGAG+TGG | - | chr5_2:7761661-7761680 | None:intergenic | 30.0% | |
| TTCTATATCATGTTCTGCAA+TGG | - | chr5_2:7761748-7761767 | None:intergenic | 30.0% | |
| ATCAGAATTGCAATACAAAC+AGG | - | chr5_2:7761921-7761940 | None:intergenic | 30.0% | |
| GGTTTCATGGTTTATTCAAT+AGG | + | chr5_2:7762016-7762035 | Msa0754220:intron | 30.0% | |
| ! | AAGGTGAAAATTTTATTCCC+AGG | - | chr5_2:7762176-7762195 | None:intergenic | 30.0% |
| GGGTTATAAAATTTATTCCC+AGG | - | chr5_2:7762221-7762240 | None:intergenic | 30.0% | |
| AATAAGCCGAAAACAACTTA+GGG | - | chr5_2:7762257-7762276 | None:intergenic | 30.0% | |
| AAATAAGCCGAAAACAACTT+AGG | - | chr5_2:7762258-7762277 | None:intergenic | 30.0% | |
| TTGTTTATCAAATCAGGTCT+TGG | + | chr5_2:7762420-7762439 | Msa0754220:intron | 30.0% | |
| AAAAATTAGCAATGGCAATG+AGG | - | chr5_2:7762489-7762508 | None:intergenic | 30.0% | |
| CTTTATAAACATGGAGGAAA+GGG | - | chr5_2:7762747-7762766 | None:intergenic | 30.0% | |
| ACTTTATAAACATGGAGGAA+AGG | - | chr5_2:7762748-7762767 | None:intergenic | 30.0% | |
| TAACACACTAGTATTATCCA+TGG | + | chr5_2:7762770-7762789 | Msa0754220:intron | 30.0% | |
| GTGCAATTTATTTGTGAGAA+TGG | + | chr5_2:7763206-7763225 | Msa0754220:intron | 30.0% | |
| CGAAGATTGAAACACAAATA+AGG | - | chr5_2:7763246-7763265 | None:intergenic | 30.0% | |
| ! | ATAAATCAAGTTTTGCGCAT+TGG | - | chr5_2:7763320-7763339 | None:intergenic | 30.0% |
| ! | TACTATCTGCTTTCAACTTT+TGG | + | chr5_2:7763655-7763674 | Msa0754220:intron | 30.0% |
| ACTTTGATCAAGATCATTGT+TGG | + | chr5_2:7763749-7763768 | Msa0754220:intron | 30.0% | |
| TAGATTGTTGAGGTGTAATA+AGG | - | chr5_2:7764063-7764082 | None:intergenic | 30.0% | |
| TCTGAACATATAGATTGTTG+AGG | - | chr5_2:7764073-7764092 | None:intergenic | 30.0% | |
| !! | TTTTGAGTAAACCACCAAAT+TGG | + | chr5_2:7764121-7764140 | Msa0754220:intron | 30.0% |
| TTCAAGACTAATTTCAGAGA+TGG | - | chr5_2:7764147-7764166 | None:intergenic | 30.0% | |
| AACAACTACATTTGTGCTAA+AGG | - | chr5_2:7764367-7764386 | None:intergenic | 30.0% | |
| TTTAGCACAAATGTAGTTGT+TGG | + | chr5_2:7764366-7764385 | Msa0754220:intron | 30.0% | |
| TTCCTATTTGTCTGACTATA+TGG | + | chr5_2:7764584-7764603 | Msa0754220:intron | 30.0% | |
| ATCCATATAGTCAGACAAAT+AGG | - | chr5_2:7764589-7764608 | None:intergenic | 30.0% | |
| AATTGAATTACCAGAACTGA+AGG | + | chr5_2:7764674-7764693 | Msa0754220:CDS | 30.0% | |
| ! | CAATATTGACTAGAAACACA+TGG | - | chr5_2:7764844-7764863 | None:intergenic | 30.0% |
| !! | GAAAGTCATTTTCATTACAC+AGG | - | chr5_2:7764916-7764935 | None:intergenic | 30.0% |
| CATACTACAAGCTAATTAGA+TGG | - | chr5_2:7765172-7765191 | None:intergenic | 30.0% | |
| GACATGACAAAAATGAAAAC+TGG | + | chr5_2:7765284-7765303 | Msa0754220:three_prime_UTR | 30.0% | |
| !!! | GAATCTTAGTTTTGATGCCA+TGG | - | chr5_2:7757986-7758005 | None:intergenic | 35.0% |
| !! | AACCAGCTTTAGGGAAATTA+GGG | - | chr5_2:7758016-7758035 | None:intergenic | 35.0% |
| !! | AAACCAGCTTTAGGGAAATT+AGG | - | chr5_2:7758017-7758036 | None:intergenic | 35.0% |
| AACAGAACAAACCAGCTTTA+GGG | - | chr5_2:7758025-7758044 | None:intergenic | 35.0% | |
| AAACAGAACAAACCAGCTTT+AGG | - | chr5_2:7758026-7758045 | None:intergenic | 35.0% | |
| GCAACAAAGTTGTTATGTCT+TGG | - | chr5_2:7758211-7758230 | None:intergenic | 35.0% | |
| AGACATAACAACTTTGTTGC+TGG | + | chr5_2:7758211-7758230 | Msa0754220:CDS | 35.0% | |
| ATCGTGTCCTTAAAAGCTTT+GGG | - | chr5_2:7758239-7758258 | None:intergenic | 35.0% | |
| AATCGTGTCCTTAAAAGCTT+TGG | - | chr5_2:7758240-7758259 | None:intergenic | 35.0% | |
| ! | TTTGTTTGTTGAGCGTTACA+AGG | + | chr5_2:7758262-7758281 | Msa0754220:CDS | 35.0% |
| ! | TTGTTTGTTGAGCGTTACAA+GGG | + | chr5_2:7758263-7758282 | Msa0754220:CDS | 35.0% |
| CACTATTGTTATCTTGAAGG+TGG | + | chr5_2:7758406-7758425 | Msa0754220:intron | 35.0% | |
| ATTGTTATCTTGAAGGTGGT+AGG | + | chr5_2:7758410-7758429 | Msa0754220:intron | 35.0% | |
| TTGTTATCTTGAAGGTGGTA+GGG | + | chr5_2:7758411-7758430 | Msa0754220:intron | 35.0% | |
| !! | AGTGCGTAAATTTTAGTCTC+TGG | + | chr5_2:7758608-7758627 | Msa0754220:intron | 35.0% |
| ! | CTCTTGTAATTTGTGGTTAG+TGG | + | chr5_2:7758750-7758769 | Msa0754220:intron | 35.0% |
| TGTTTCTTGTGGATCCAATT+AGG | + | chr5_2:7758816-7758835 | Msa0754220:intron | 35.0% | |
| TGATTCCAACTTGTGTAAAG+TGG | + | chr5_2:7758863-7758882 | Msa0754220:intron | 35.0% | |
| GTCACACTATAGTGAAATGT+AGG | - | chr5_2:7758969-7758988 | None:intergenic | 35.0% | |
| TTAAAACTAACGGAATGGAG+CGG | + | chr5_2:7759019-7759038 | Msa0754220:intron | 35.0% | |
| TTCCGTCAATTTCCAAACAA+TGG | - | chr5_2:7759145-7759164 | None:intergenic | 35.0% | |
| TTGTTTGGAAATTGACGGAA+CGG | + | chr5_2:7759145-7759164 | Msa0754220:intron | 35.0% | |
| TACTCACAAATGATTGACCT+GGG | - | chr5_2:7759241-7759260 | None:intergenic | 35.0% | |
| TCTAATGAAACTGCATGTGT+TGG | - | chr5_2:7759267-7759286 | None:intergenic | 35.0% | |
| TTAGTAGCATGGTATACAAG+GGG | - | chr5_2:7759320-7759339 | None:intergenic | 35.0% | |
| ! | ATTATAGCTTGTAGCAGACA+TGG | - | chr5_2:7759389-7759408 | None:intergenic | 35.0% |
| ACATAAATACAGATGAAGGC+AGG | + | chr5_2:7759484-7759503 | Msa0754220:intron | 35.0% | |
| ! | GTTAAATGGATGGTATTGGA+TGG | + | chr5_2:7759684-7759703 | Msa0754220:intron | 35.0% |
| CAAAACCAAACAATGGAACA+TGG | + | chr5_2:7759749-7759768 | Msa0754220:intron | 35.0% | |
| TTAGGCTATGTTTGGATTGA+TGG | - | chr5_2:7759812-7759831 | None:intergenic | 35.0% | |
| ATAGTACAAAGAACGAAAGG+GGG | - | chr5_2:7759896-7759915 | None:intergenic | 35.0% | |
| AATCCTAATGCACACACAAA+AGG | - | chr5_2:7759975-7759994 | None:intergenic | 35.0% | |
| TATGCTCATAGTTATTTGGG+TGG | + | chr5_2:7760008-7760027 | Msa0754220:intron | 35.0% | |
| ATGCTCATAGTTATTTGGGT+GGG | + | chr5_2:7760009-7760028 | Msa0754220:intron | 35.0% | |
| ATAATTGAAGAGAAGCTTCC+GGG | - | chr5_2:7760079-7760098 | None:intergenic | 35.0% | |
| ATAGACTCCAATATTAGAGG+AGG | + | chr5_2:7760097-7760116 | Msa0754220:intron | 35.0% | |
| !!! | GTTGGTATTGTTTTGGACTT+TGG | + | chr5_2:7760281-7760300 | Msa0754220:intron | 35.0% |
| !!! | AGCTTGCATTAGTTTTAGCA+TGG | + | chr5_2:7760361-7760380 | Msa0754220:intron | 35.0% |
| GGGTTACAAAAATAATTCCC+AGG | + | chr5_2:7760533-7760552 | Msa0754220:intron | 35.0% | |
| GGAATAACACAAATATGCCA+AGG | + | chr5_2:7760597-7760616 | Msa0754220:intron | 35.0% | |
| ATCTCATGGGAATAAAAGAC+AGG | - | chr5_2:7760683-7760702 | None:intergenic | 35.0% | |
| TTTATTCCCATGAGATAGCA+TGG | + | chr5_2:7760687-7760706 | Msa0754220:intron | 35.0% | |
| TTATTCCCATGAGATAGCAT+GGG | + | chr5_2:7760688-7760707 | Msa0754220:intron | 35.0% | |
| !!! | ATGGGAAAGTTTTATTCCCA+GGG | + | chr5_2:7760706-7760725 | Msa0754220:intron | 35.0% |
| ! | AGGTATTTTGTTGGAGATCA+TGG | - | chr5_2:7760740-7760759 | None:intergenic | 35.0% |
| TCATGGGTGAAAATGTTTAG+CGG | - | chr5_2:7760804-7760823 | None:intergenic | 35.0% | |
| TGATTTCACTCTTCTGTTCA+AGG | + | chr5_2:7760889-7760908 | Msa0754220:intron | 35.0% | |
| ACAAAAGAATTGCCAAACAG+TGG | - | chr5_2:7761079-7761098 | None:intergenic | 35.0% | |
| !!! | TTTTGCATCGATTCATGATG+GGG | - | chr5_2:7761107-7761126 | None:intergenic | 35.0% |
| AGGAAAAGTTAGAAGAAGGT+GGG | - | chr5_2:7761160-7761179 | None:intergenic | 35.0% | |
| TAGGAAAAGTTAGAAGAAGG+TGG | - | chr5_2:7761161-7761180 | None:intergenic | 35.0% | |
| ATACAAAGAATTCAGGCTCA+TGG | - | chr5_2:7761198-7761217 | None:intergenic | 35.0% | |
| ! | GAGTTCTAACACATGCTTAT+TGG | - | chr5_2:7761249-7761268 | None:intergenic | 35.0% |
| TGATATAGAAGTAGCGACTA+AGG | + | chr5_2:7761758-7761777 | Msa0754220:intron | 35.0% | |
| !! | TTTGGTTGATGATGTAAGAG+TGG | + | chr5_2:7761799-7761818 | Msa0754220:intron | 35.0% |
| ! | CACAGGGAATTTTCTGTTTA+TGG | + | chr5_2:7761847-7761866 | Msa0754220:intron | 35.0% |
| TCTGATCTTTCTCAAGTAAC+TGG | + | chr5_2:7761935-7761954 | Msa0754220:intron | 35.0% | |
| CTGATCTTTCTCAAGTAACT+GGG | + | chr5_2:7761936-7761955 | Msa0754220:intron | 35.0% | |
| ! | TAACTGGGTTGTAACTTGTA+CGG | + | chr5_2:7761951-7761970 | Msa0754220:intron | 35.0% |
| AGATTTACAACATGAGTTGC+AGG | - | chr5_2:7761981-7762000 | None:intergenic | 35.0% | |
| AAATCTAGAGAAGAAGACGT+TGG | + | chr5_2:7761995-7762014 | Msa0754220:intron | 35.0% | |
| ! | AATTTTCACCTTCACATTCC+TGG | + | chr5_2:7762184-7762203 | Msa0754220:intron | 35.0% |
| ! | ATTTTCACCTTCACATTCCT+GGG | + | chr5_2:7762185-7762204 | Msa0754220:intron | 35.0% |
| ATAAGCCGAAAACAACTTAG+GGG | - | chr5_2:7762256-7762275 | None:intergenic | 35.0% | |
| ! | TTTTAATCTACGTTCCCTAC+CGG | + | chr5_2:7762505-7762524 | Msa0754220:intron | 35.0% |
| AGAAGTGAAAATGAGTACAC+CGG | - | chr5_2:7762527-7762546 | None:intergenic | 35.0% | |
| TCAGTTTCTTACTTCCATGT+TGG | + | chr5_2:7762592-7762611 | Msa0754220:intron | 35.0% | |
| TTCAGAGTTAGTAACCAACA+TGG | - | chr5_2:7762609-7762628 | None:intergenic | 35.0% | |
| TTTCTACTTGCTTCCAATAG+AGG | - | chr5_2:7762694-7762713 | None:intergenic | 35.0% | |
| CTATTGGAAGCAAGTAGAAA+CGG | + | chr5_2:7762694-7762713 | Msa0754220:intron | 35.0% | |
| AAGTGATATTCAAAACCAGC+AGG | - | chr5_2:7762807-7762826 | None:intergenic | 35.0% | |
| TATTGTCAAACCATGTGTTG+CGG | + | chr5_2:7762831-7762850 | Msa0754220:intron | 35.0% | |
| AAACTTTGCTCCTATTGCTA+GGG | - | chr5_2:7762930-7762949 | None:intergenic | 35.0% | |
| ! | AACTTCTTTGGTTTCCTCAA+CGG | - | chr5_2:7762956-7762975 | None:intergenic | 35.0% |
| CATGATGTTCAAAGTATACC+AGG | - | chr5_2:7762980-7762999 | None:intergenic | 35.0% | |
| ! | AAGTGTGTTTTTCGCTGAAA+TGG | + | chr5_2:7763361-7763380 | Msa0754220:intron | 35.0% |
| ! | AGTGTGTTTTTCGCTGAAAT+GGG | + | chr5_2:7763362-7763381 | Msa0754220:intron | 35.0% |
| TGAACTCTCTGTATATCAAG+AGG | - | chr5_2:7763411-7763430 | None:intergenic | 35.0% | |
| TGGTAACAAAATCTTGTGTC+AGG | + | chr5_2:7763806-7763825 | Msa0754220:intron | 35.0% | |
| GTAACAAAATCTTGTGTGTC+AGG | + | chr5_2:7763873-7763892 | Msa0754220:intron | 35.0% | |
| !! | GTTGATGATTTGATTGCAAC+TGG | + | chr5_2:7763990-7764009 | Msa0754220:CDS | 35.0% |
| ! | GATTTACTTGGTGAGAAAAG+TGG | + | chr5_2:7764035-7764054 | Msa0754220:intron | 35.0% |
| AATTTCAGAGATGGCCAATT+TGG | - | chr5_2:7764138-7764157 | None:intergenic | 35.0% | |
| !!! | ATGTTTTGGTCACATGACTA+GGG | - | chr5_2:7764218-7764237 | None:intergenic | 35.0% |
| !!! | TATGTTTTGGTCACATGACT+AGG | - | chr5_2:7764219-7764238 | None:intergenic | 35.0% |
| GGTTACAGAGACCAATTTAA+TGG | + | chr5_2:7764321-7764340 | Msa0754220:intron | 35.0% | |
| !!! | GATGTCTTTTTAGAACGTGT+CGG | + | chr5_2:7764624-7764643 | Msa0754220:intron | 35.0% |
| AATACACATACCTTCAGTTC+TGG | - | chr5_2:7764687-7764706 | None:intergenic | 35.0% | |
| GACTAGAAACACATGGATTT+CGG | - | chr5_2:7764837-7764856 | None:intergenic | 35.0% | |
| CGTCCCATACAATCAAATTA+TGG | + | chr5_2:7765103-7765122 | Msa0754220:three_prime_UTR | 35.0% | |
| ! | ATTTGGGAGATGTCATTTAG+TGG | + | chr5_2:7765126-7765145 | Msa0754220:three_prime_UTR | 35.0% |
| ! | GGTGGCTTATAAATTTTGCA+TGG | + | chr5_2:7765319-7765338 | Msa0754220:three_prime_UTR | 35.0% |
| GGAGCTTAATTTAGTGAAGA+AGG | + | chr5_2:7765340-7765359 | Msa0754220:three_prime_UTR | 35.0% | |
| !!! | TAGTTTTGATGCCATGGAGA+CGG | - | chr5_2:7757980-7757999 | None:intergenic | 40.0% |
| TGTTATCTTGAAGGTGGTAG+GGG | + | chr5_2:7758412-7758431 | Msa0754220:intron | 40.0% | |
| TCCATGGCTACAAGAAAGTT+GGG | + | chr5_2:7758435-7758454 | Msa0754220:intron | 40.0% | |
| ! | TGTAATTTGTGGTTAGTGGG+TGG | + | chr5_2:7758754-7758773 | Msa0754220:intron | 40.0% |
| AATGGTTCTCCATGCCTAAT+TGG | - | chr5_2:7758833-7758852 | None:intergenic | 40.0% | |
| AATTAGGCATGGAGAACCAT+TGG | + | chr5_2:7758832-7758851 | Msa0754220:intron | 40.0% | |
| AGTTGGAACATGCGTTAAGT+GGG | - | chr5_2:7758890-7758909 | None:intergenic | 40.0% | |
| !! | AGTGTGACACTGTCACTTTA+AGG | + | chr5_2:7758981-7759000 | Msa0754220:intron | 40.0% |
| !! | TGTCACTTTAAGGCTCTGTT+TGG | + | chr5_2:7758991-7759010 | Msa0754220:intron | 40.0% |
| AATTGAATTCTCTACTCCCC+AGG | + | chr5_2:7759221-7759240 | Msa0754220:intron | 40.0% | |
| ACTCACAAATGATTGACCTG+GGG | - | chr5_2:7759240-7759259 | None:intergenic | 40.0% | |
| CTACTCACAAATGATTGACC+TGG | - | chr5_2:7759242-7759261 | None:intergenic | 40.0% | |
| TGAAGAGACAGAGAAGATGA+AGG | + | chr5_2:7759515-7759534 | Msa0754220:intron | 40.0% | |
| GAATGGTGCGTGCTAAAATT+GGG | + | chr5_2:7759573-7759592 | Msa0754220:intron | 40.0% | |
| CATCAGATACCTCCCAAATT+GGG | + | chr5_2:7759646-7759665 | Msa0754220:intron | 40.0% | |
| ! | ATGGATGGTATTGGATGGAA+TGG | + | chr5_2:7759689-7759708 | Msa0754220:intron | 40.0% |
| ! | TGGATGGTATTGGATGGAAT+GGG | + | chr5_2:7759690-7759709 | Msa0754220:intron | 40.0% |
| TGGAACCATGTTCCATTGTT+TGG | - | chr5_2:7759757-7759776 | None:intergenic | 40.0% | |
| ! | AGTGATGGAATGGAATGGAA+TGG | - | chr5_2:7759787-7759806 | None:intergenic | 40.0% |
| ! | ATTGATGGAGAGTGATGGAA+TGG | - | chr5_2:7759797-7759816 | None:intergenic | 40.0% |
| TTTGGATTGATGGAGAGTGA+TGG | - | chr5_2:7759802-7759821 | None:intergenic | 40.0% | |
| TCCAAACATAGCCTAAGTAC+TGG | + | chr5_2:7759816-7759835 | Msa0754220:intron | 40.0% | |
| ACCAGTACTTAGGCTATGTT+TGG | - | chr5_2:7759820-7759839 | None:intergenic | 40.0% | |
| ! | TGTCCTTTTGTGTGTGCATT+AGG | + | chr5_2:7759969-7759988 | Msa0754220:intron | 40.0% |
| TGCTCATAGTTATTTGGGTG+GGG | + | chr5_2:7760010-7760029 | Msa0754220:intron | 40.0% | |
| ATGTTTGGATCCCATCATTC+AGG | + | chr5_2:7760396-7760415 | Msa0754220:intron | 40.0% | |
| CCAAACTAAGCCTGAATGAT+GGG | - | chr5_2:7760409-7760428 | None:intergenic | 40.0% | |
| TCCAAACTAAGCCTGAATGA+TGG | - | chr5_2:7760410-7760429 | None:intergenic | 40.0% | |
| !! | TATAAGGGGGTGTTTGTTTG+AGG | + | chr5_2:7760512-7760531 | Msa0754220:intron | 40.0% |
| !! | ATAAGGGGGTGTTTGTTTGA+GGG | + | chr5_2:7760513-7760532 | Msa0754220:intron | 40.0% |
| AATTCCAGCCTTAGATTCCT+GGG | - | chr5_2:7760553-7760572 | None:intergenic | 40.0% | |
| CCTGGGAAAAATGTATTCCT+TGG | - | chr5_2:7760617-7760636 | None:intergenic | 40.0% | |
| ! | CCAAGGAATACATTTTTCCC+AGG | + | chr5_2:7760614-7760633 | Msa0754220:intron | 40.0% |
| AGGAAAAATGGGTAGAACGT+GGG | - | chr5_2:7760663-7760682 | None:intergenic | 40.0% | |
| ACTTTCCCATGCTATCTCAT+GGG | - | chr5_2:7760696-7760715 | None:intergenic | 40.0% | |
| AACTTTCCCATGCTATCTCA+TGG | - | chr5_2:7760697-7760716 | None:intergenic | 40.0% | |
| !!! | CATGGGAAAGTTTTATTCCC+AGG | + | chr5_2:7760705-7760724 | Msa0754220:intron | 40.0% |
| ! | GATCATGGTTTTCATTCCCT+GGG | - | chr5_2:7760725-7760744 | None:intergenic | 40.0% |
| ! | AGATCATGGTTTTCATTCCC+TGG | - | chr5_2:7760726-7760745 | None:intergenic | 40.0% |
| !!! | GGGTAGAAGAGGTATTTTGT+TGG | - | chr5_2:7760749-7760768 | None:intergenic | 40.0% |
| ! | GAGAAAAAGAATAGCGGGAA+TGG | - | chr5_2:7760775-7760794 | None:intergenic | 40.0% |
| CATGGGTGAAAATGTTTAGC+GGG | - | chr5_2:7760803-7760822 | None:intergenic | 40.0% | |
| TTCATCAACTGCTTGCCAAT+TGG | + | chr5_2:7760860-7760879 | Msa0754220:intron | 40.0% | |
| TCATCAACTGCTTGCCAATT+GGG | + | chr5_2:7760861-7760880 | Msa0754220:intron | 40.0% | |
| ACACTTGGGAACATCATCTA+GGG | - | chr5_2:7761334-7761353 | None:intergenic | 40.0% | |
| ! | TTGTGTCACTAGTCTGATGT+TGG | + | chr5_2:7761458-7761477 | Msa0754220:intron | 40.0% |
| TTTGGCCCATTAGAAAAGTG+TGG | + | chr5_2:7761613-7761632 | Msa0754220:intron | 40.0% | |
| ! | TGGTGGCATTTTCTGTTTTC+TGG | + | chr5_2:7761819-7761838 | Msa0754220:intron | 40.0% |
| !!! | TCTGTTTTCTGGTTTTGCAC+AGG | + | chr5_2:7761830-7761849 | Msa0754220:intron | 40.0% |
| !!! | CTGTTTTCTGGTTTTGCACA+GGG | + | chr5_2:7761831-7761850 | Msa0754220:intron | 40.0% |
| TTCTGTTTATGGACTTCGCT+TGG | + | chr5_2:7761858-7761877 | Msa0754220:intron | 40.0% | |
| !! | AGAAGAAGACGTTGGTTTCA+TGG | + | chr5_2:7762003-7762022 | Msa0754220:intron | 40.0% |
| ! | TCATTTTCCCAGGAATGTGA+AGG | - | chr5_2:7762195-7762214 | None:intergenic | 40.0% |
| TTCCTGGGAAAATGAATACC+TGG | + | chr5_2:7762200-7762219 | Msa0754220:intron | 40.0% | |
| TCCTGGGAAAATGAATACCT+GGG | + | chr5_2:7762201-7762220 | Msa0754220:intron | 40.0% | |
| TAAGCCGAAAACAACTTAGG+GGG | - | chr5_2:7762255-7762274 | None:intergenic | 40.0% | |
| ! | AAGCAAACACAGAGAGCATA+TGG | - | chr5_2:7762281-7762300 | None:intergenic | 40.0% |
| TGAAAATGAGTACACCGGTA+GGG | - | chr5_2:7762522-7762541 | None:intergenic | 40.0% | |
| AGCAGGAAATGAAGAAACCA+TGG | - | chr5_2:7762790-7762809 | None:intergenic | 40.0% | |
| ATGGTTTCTTCATTTCCTGC+TGG | + | chr5_2:7762789-7762808 | Msa0754220:intron | 40.0% | |
| AATTAGTTCACCGCAACACA+TGG | - | chr5_2:7762844-7762863 | None:intergenic | 40.0% | |
| ! | GAAGCTCGAGGTTTCATTTT+TGG | + | chr5_2:7762893-7762912 | Msa0754220:CDS | 40.0% |
| CAAACTTTGCTCCTATTGCT+AGG | - | chr5_2:7762931-7762950 | None:intergenic | 40.0% | |
| AGTATACCAGGCAACTTCTT+TGG | - | chr5_2:7762968-7762987 | None:intergenic | 40.0% | |
| ATAGTGTGATGCAAGTGAAG+AGG | - | chr5_2:7763015-7763034 | None:intergenic | 40.0% | |
| GAGGAAGAAAACACACATAG+TGG | - | chr5_2:7763066-7763085 | None:intergenic | 40.0% | |
| ATTTGTGAGAATGGTTCTCG+AGG | + | chr5_2:7763215-7763234 | Msa0754220:intron | 40.0% | |
| TATTCCTTGTGTTTGTGCCT+TGG | + | chr5_2:7763337-7763356 | Msa0754220:intron | 40.0% | |
| AGCGAAAAACACACTTTCCA+AGG | - | chr5_2:7763357-7763376 | None:intergenic | 40.0% | |
| !! | TCAGTTATGTGGCTTTGTCA+TGG | + | chr5_2:7763721-7763740 | Msa0754220:intron | 40.0% |
| GTGTGTCAGACAAAATCTTG+TGG | + | chr5_2:7763786-7763805 | Msa0754220:intron | 40.0% | |
| GATGATTTGATTGCAACTGG+TGG | + | chr5_2:7763993-7764012 | Msa0754220:CDS | 40.0% | |
| TATTCCACCAACACGTACAA+CGG | - | chr5_2:7765051-7765070 | None:intergenic | 40.0% | |
| ATATGAGCTGCTCGTGAATA+TGG | + | chr5_2:7765078-7765097 | Msa0754220:exon | 40.0% | |
| AATTTGTATGACCCACCCTT+TGG | + | chr5_2:7765213-7765232 | Msa0754220:three_prime_UTR | 40.0% | |
| ATTTGTATGACCCACCCTTT+GGG | + | chr5_2:7765214-7765233 | Msa0754220:three_prime_UTR | 40.0% | |
| TTATAAGCCACCTCTAGTCT+GGG | - | chr5_2:7765311-7765330 | None:intergenic | 40.0% | |
| TTTATAAGCCACCTCTAGTC+TGG | - | chr5_2:7765312-7765331 | None:intergenic | 40.0% | |
| TGAGTACAGAGAAGAGGAAG+AGG | - | chr5_2:7757906-7757925 | None:intergenic | 45.0% | |
| ! | GTGAGTTGAGTACAGAGAAG+AGG | - | chr5_2:7757912-7757931 | None:intergenic | 45.0% |
| GTCTTACCCTAACCATAACC+AGG | + | chr5_2:7757950-7757969 | Msa0754220:CDS | 45.0% | |
| !! | AGTTTTGATGCCATGGAGAC+GGG | - | chr5_2:7757979-7757998 | None:intergenic | 45.0% |
| GTCCCTAATTTCCCTAAAGC+TGG | + | chr5_2:7758011-7758030 | Msa0754220:CDS | 45.0% | |
| ! | GCTGGATCCCAAAGCTTTTA+AGG | + | chr5_2:7758229-7758248 | Msa0754220:CDS | 45.0% |
| GTCCATGGCTACAAGAAAGT+TGG | + | chr5_2:7758434-7758453 | Msa0754220:intron | 45.0% | |
| ACCCAACTTTCTTGTAGCCA+TGG | - | chr5_2:7758439-7758458 | None:intergenic | 45.0% | |
| TGGCTACAAGAAAGTTGGGT+AGG | + | chr5_2:7758439-7758458 | Msa0754220:intron | 45.0% | |
| ! | TCAGCGGTTCTTGTTTCTTG+TGG | + | chr5_2:7758805-7758824 | Msa0754220:intron | 45.0% |
| CTTGTGGATCCAATTAGGCA+TGG | + | chr5_2:7758821-7758840 | Msa0754220:intron | 45.0% | |
| TGGGTCCACTTTACACAAGT+TGG | - | chr5_2:7758871-7758890 | None:intergenic | 45.0% | |
| GAGTTGGAACATGCGTTAAG+TGG | - | chr5_2:7758891-7758910 | None:intergenic | 45.0% | |
| TAACGCATGTTCCAACTCAG+TGG | + | chr5_2:7758893-7758912 | Msa0754220:intron | 45.0% | |
| TCCAACTCAGTGGATGTTTG+TGG | + | chr5_2:7758903-7758922 | Msa0754220:intron | 45.0% | |
| ACCACAAACATCCACTGAGT+TGG | - | chr5_2:7758907-7758926 | None:intergenic | 45.0% | |
| ! | CAGAGAAGATGAAGGCATGT+TGG | + | chr5_2:7759523-7759542 | Msa0754220:intron | 45.0% |
| GGAATGGTGCGTGCTAAAAT+TGG | + | chr5_2:7759572-7759591 | Msa0754220:intron | 45.0% | |
| !! | TTGGGAGGTATCTGATGGAA+TGG | - | chr5_2:7759643-7759662 | None:intergenic | 45.0% |
| !! | CCAATTTGGGAGGTATCTGA+TGG | - | chr5_2:7759648-7759667 | None:intergenic | 45.0% |
| CCATCAGATACCTCCCAAAT+TGG | + | chr5_2:7759645-7759664 | Msa0754220:intron | 45.0% | |
| TTCATTCCACCCAATTTGGG+AGG | - | chr5_2:7759658-7759677 | None:intergenic | 45.0% | |
| TGGAATGGAATGGAGTGTGA+TGG | - | chr5_2:7759718-7759737 | None:intergenic | 45.0% | |
| GGAATGGAATGGAATGGAGT+GGG | - | chr5_2:7759722-7759741 | None:intergenic | 45.0% | |
| TGGAATGGAATGGAATGGAG+TGG | - | chr5_2:7759782-7759801 | None:intergenic | 45.0% | |
| ! | TGGAGAGTGATGGAATGGAA+TGG | - | chr5_2:7759792-7759811 | None:intergenic | 45.0% |
| CCCATCATTCAGGCTTAGTT+TGG | + | chr5_2:7760406-7760425 | Msa0754220:intron | 45.0% | |
| ! | AATTCCCAGGAATCTAAGGC+TGG | + | chr5_2:7760546-7760565 | Msa0754220:intron | 45.0% |
| CAATTCCAGCCTTAGATTCC+TGG | - | chr5_2:7760554-7760573 | None:intergenic | 45.0% | |
| CGTGGGTAAAAGACTTTCCT+GGG | - | chr5_2:7760634-7760653 | None:intergenic | 45.0% | |
| ACGTGGGTAAAAGACTTTCC+TGG | - | chr5_2:7760635-7760654 | None:intergenic | 45.0% | |
| GAAAAATGGGTAGAACGTGG+GGG | - | chr5_2:7760661-7760680 | None:intergenic | 45.0% | |
| GGAAAAATGGGTAGAACGTG+GGG | - | chr5_2:7760662-7760681 | None:intergenic | 45.0% | |
| CAGGAAAAATGGGTAGAACG+TGG | - | chr5_2:7760664-7760683 | None:intergenic | 45.0% | |
| ! | AAGAATAGCGGGAATGGCAA+GGG | - | chr5_2:7760769-7760788 | None:intergenic | 45.0% |
| ! | AAAGAATAGCGGGAATGGCA+AGG | - | chr5_2:7760770-7760789 | None:intergenic | 45.0% |
| CACACTTGGGAACATCATCT+AGG | - | chr5_2:7761335-7761354 | None:intergenic | 45.0% | |
| !! | GGTTGATGATGTAAGAGTGG+TGG | + | chr5_2:7761802-7761821 | Msa0754220:intron | 45.0% |
| GGCTTGAGATGTAGAATCCT+GGG | - | chr5_2:7762068-7762087 | None:intergenic | 45.0% | |
| TGGCTTGAGATGTAGAATCC+TGG | - | chr5_2:7762069-7762088 | None:intergenic | 45.0% | |
| ! | TCCCAGGTATTCATTTTCCC+AGG | - | chr5_2:7762205-7762224 | None:intergenic | 45.0% |
| !! | AACGCCCCCTAAGTTGTTTT+CGG | + | chr5_2:7762248-7762267 | Msa0754220:intron | 45.0% |
| AGCAATGGCAATGAGGAAAG+AGG | - | chr5_2:7762482-7762501 | None:intergenic | 45.0% | |
| GTGAAAATGAGTACACCGGT+AGG | - | chr5_2:7762523-7762542 | None:intergenic | 45.0% | |
| GGAAGCAAGTAGAAACGGAA+TGG | + | chr5_2:7762699-7762718 | Msa0754220:intron | 45.0% | |
| ! | TCTTTAGGAATCGAAGCTCG+AGG | + | chr5_2:7762881-7762900 | Msa0754220:intron | 45.0% |
| GAGCAAAGTTTGTACCGTTG+AGG | + | chr5_2:7762939-7762958 | Msa0754220:CDS | 45.0% | |
| AGGAAACCAAAGAAGTTGCC+TGG | + | chr5_2:7762959-7762978 | Msa0754220:CDS | 45.0% | |
| TTGCATAGGTGATGCTATGC+AGG | - | chr5_2:7763184-7763203 | None:intergenic | 45.0% | |
| CTTTCCAAGGCACAAACACA+AGG | - | chr5_2:7763344-7763363 | None:intergenic | 45.0% | |
| GGAATATGGAAGGGATTGTC+TGG | + | chr5_2:7763923-7763942 | Msa0754220:CDS | 45.0% | |
| GATTGTCTGGAGATGCATGT+TGG | + | chr5_2:7763936-7763955 | Msa0754220:CDS | 45.0% | |
| GGTGCAGCTATGGATTTACT+TGG | + | chr5_2:7764023-7764042 | Msa0754220:CDS | 45.0% | |
| TTCAGAGATGGCCAATTTGG+TGG | - | chr5_2:7764135-7764154 | None:intergenic | 45.0% | |
| TCATGTGATACGTACGTGAC+AGG | + | chr5_2:7765002-7765021 | Msa0754220:intron | 45.0% | |
| CATGTGATACGTACGTGACA+GGG | + | chr5_2:7765003-7765022 | Msa0754220:intron | 45.0% | |
| AGGGTCGTGAACGTTTGAAT+GGG | + | chr5_2:7765022-7765041 | Msa0754220:intron | 45.0% | |
| !!! | ATTATTATATTATAATTTGT+GGG | + | chr5_2:7758941-7758960 | Msa0754220:intron | 5.0% |
| !!! | TTTTTTTTTTGTTAAATATA+TGG | - | chr5_2:7764796-7764815 | None:intergenic | 5.0% |
| GGGGATCCTGGTTATGGTTA+GGG | - | chr5_2:7757959-7757978 | None:intergenic | 50.0% | |
| !! | GTTTTGATGCCATGGAGACG+GGG | - | chr5_2:7757978-7757997 | None:intergenic | 50.0% |
| ACTAACGGAATGGAGCGGAA+CGG | + | chr5_2:7759024-7759043 | Msa0754220:intron | 50.0% | |
| CGGAATGGAACGGAATGGAA+CGG | + | chr5_2:7759044-7759063 | Msa0754220:intron | 50.0% | |
| TGGAACGGAATGGAACGGAA+CGG | + | chr5_2:7759049-7759068 | Msa0754220:intron | 50.0% | |
| CAGATACCTCCCAAATTGGG+TGG | + | chr5_2:7759649-7759668 | Msa0754220:intron | 50.0% | |
| TGGAATGGAATGGAGTGGGA+TGG | - | chr5_2:7759777-7759796 | None:intergenic | 50.0% | |
| ACAATGAGGTCTAGCGCAAG+TGG | + | chr5_2:7760171-7760190 | Msa0754220:intron | 50.0% | |
| !! | CTTAGGGGGCGTTTGTTTGA+GGG | - | chr5_2:7762241-7762260 | None:intergenic | 50.0% |
| !! | ACTTAGGGGGCGTTTGTTTG+AGG | - | chr5_2:7762242-7762261 | None:intergenic | 50.0% |
| GCTCCTATTGCTAGGGCAAT+GGG | - | chr5_2:7762923-7762942 | None:intergenic | 50.0% | |
| TGCTCCTATTGCTAGGGCAA+TGG | - | chr5_2:7762924-7762943 | None:intergenic | 50.0% | |
| CATGTTGGAGCTGTTGAAGC+TGG | + | chr5_2:7763951-7763970 | Msa0754220:CDS | 50.0% | |
| ! | AGCTGGTGAACGTGCTATTG+TGG | + | chr5_2:7763968-7763987 | Msa0754220:CDS | 50.0% |
| ATTGCAACTGGTGGAACGCT+CGG | + | chr5_2:7764002-7764021 | Msa0754220:CDS | 50.0% | |
| ! | TTTAGAACGTGTCGGAGCAG+AGG | + | chr5_2:7764632-7764651 | Msa0754220:intron | 50.0% |
| CAGGGTCGTGAACGTTTGAA+TGG | + | chr5_2:7765021-7765040 | Msa0754220:intron | 50.0% | |
| TGAGACGAGAGAGACCCAAA+GGG | - | chr5_2:7765231-7765250 | None:intergenic | 50.0% | |
| ATGAGACGAGAGAGACCCAA+AGG | - | chr5_2:7765232-7765251 | None:intergenic | 50.0% | |
| CGGGGATCCTGGTTATGGTT+AGG | - | chr5_2:7757960-7757979 | None:intergenic | 55.0% | |
| TTGAAGGTGGTAGGGGTCCA+TGG | + | chr5_2:7758419-7758438 | Msa0754220:intron | 55.0% | |
| TGGAGCGGAACGGAATGGAA+CGG | + | chr5_2:7759034-7759053 | Msa0754220:intron | 55.0% | |
| CGGAACGGAATGGAACGGAA+TGG | + | chr5_2:7759039-7759058 | Msa0754220:intron | 55.0% | |
| CGGAATGGAACGGAACGGAA+TGG | + | chr5_2:7759054-7759073 | Msa0754220:intron | 55.0% | |
| TGGAACGGAACGGAATGGAG+CGG | + | chr5_2:7759059-7759078 | Msa0754220:intron | 55.0% | |
| TAGAACGTGGGGGAGAACGT+GGG | - | chr5_2:7760651-7760670 | None:intergenic | 55.0% | |
| GGGAATGGCAAGGGTAGAAG+AGG | - | chr5_2:7760760-7760779 | None:intergenic | 55.0% | |
| CCTATTGCTAGGGCAATGGG+AGG | - | chr5_2:7762920-7762939 | None:intergenic | 55.0% | |
| CCTCCCATTGCCCTAGCAAT+AGG | + | chr5_2:7762917-7762936 | Msa0754220:CDS | 55.0% | |
| TGGGAAGCCGTTGTACGTGT+TGG | + | chr5_2:7765041-7765060 | Msa0754220:CDS | 55.0% | |
| GAAGCCGTTGTACGTGTTGG+TGG | + | chr5_2:7765044-7765063 | Msa0754220:CDS | 55.0% | |
| ACGAGAGAGACCCAAAGGGT+GGG | - | chr5_2:7765227-7765246 | None:intergenic | 55.0% | |
| GAAAACTGGGCCCAGACTAG+AGG | + | chr5_2:7765298-7765317 | Msa0754220:three_prime_UTR | 55.0% | |
| GGAGACGGGGATCCTGGTTA+TGG | - | chr5_2:7757965-7757984 | None:intergenic | 60.0% | |
| AACCAGGATCCCCGTCTCCA+TGG | + | chr5_2:7757966-7757985 | Msa0754220:CDS | 60.0% | |
| CGGAATGGAGCGGAACGGAA+TGG | + | chr5_2:7759029-7759048 | Msa0754220:intron | 60.0% | |
| GTAGAACGTGGGGGAGAACG+TGG | - | chr5_2:7760652-7760671 | None:intergenic | 60.0% | |
| !! | TGGAACGCTCGGTGCAGCTA+TGG | + | chr5_2:7764013-7764032 | Msa0754220:CDS | 60.0% |
| ACGTGTCGGAGCAGAGGTAG+TGG | + | chr5_2:7764638-7764657 | Msa0754220:CDS | 60.0% | |
| GACGAGAGAGACCCAAAGGG+TGG | - | chr5_2:7765228-7765247 | None:intergenic | 60.0% | |
| AACTGGGCCCAGACTAGAGG+TGG | + | chr5_2:7765301-7765320 | Msa0754220:three_prime_UTR | 60.0% | |
| TGCCATGGAGACGGGGATCC+TGG | - | chr5_2:7757971-7757990 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 7757871 | 7765437 | 7757871 | ID=Msa0754220;Name=Msa0754220 |
| chr5_2 | mRNA | 7757871 | 7765437 | 7757871 | ID=Msa0754220-mRNA-1;Parent=Msa0754220;Name=Msa0754220-mRNA-1;_AED=0.40;_eAED=0.40;_QI=74|1|1|1|1|1|6|354|186 |
| chr5_2 | exon | 7757871 | 7758032 | 7757871 | ID=Msa0754220-mRNA-1:exon:3503;Parent=Msa0754220-mRNA-1 |
| chr5_2 | exon | 7758198 | 7758308 | 7758198 | ID=Msa0754220-mRNA-1:exon:3504;Parent=Msa0754220-mRNA-1 |
| chr5_2 | exon | 7762888 | 7762980 | 7762888 | ID=Msa0754220-mRNA-1:exon:3505;Parent=Msa0754220-mRNA-1 |
| chr5_2 | exon | 7763895 | 7764044 | 7763895 | ID=Msa0754220-mRNA-1:exon:3506;Parent=Msa0754220-mRNA-1 |
| chr5_2 | exon | 7764637 | 7764695 | 7764637 | ID=Msa0754220-mRNA-1:exon:3507;Parent=Msa0754220-mRNA-1 |
| chr5_2 | exon | 7765024 | 7765437 | 7765024 | ID=Msa0754220-mRNA-1:exon:3508;Parent=Msa0754220-mRNA-1 |
| chr5_2 | five_prime_UTR | 7757871 | 7757944 | 7757871 | ID=Msa0754220-mRNA-1:five_prime_utr;Parent=Msa0754220-mRNA-1 |
| chr5_2 | CDS | 7757945 | 7758032 | 7757945 | ID=Msa0754220-mRNA-1:cds;Parent=Msa0754220-mRNA-1 |
| chr5_2 | CDS | 7758198 | 7758308 | 7758198 | ID=Msa0754220-mRNA-1:cds;Parent=Msa0754220-mRNA-1 |
| chr5_2 | CDS | 7762888 | 7762980 | 7762888 | ID=Msa0754220-mRNA-1:cds;Parent=Msa0754220-mRNA-1 |
| chr5_2 | CDS | 7763895 | 7764044 | 7763895 | ID=Msa0754220-mRNA-1:cds;Parent=Msa0754220-mRNA-1 |
| chr5_2 | CDS | 7764637 | 7764695 | 7764637 | ID=Msa0754220-mRNA-1:cds;Parent=Msa0754220-mRNA-1 |
| chr5_2 | CDS | 7765024 | 7765083 | 7765024 | ID=Msa0754220-mRNA-1:cds;Parent=Msa0754220-mRNA-1 |
| chr5_2 | three_prime_UTR | 7765084 | 7765437 | 7765084 | ID=Msa0754220-mRNA-1:three_prime_utr;Parent=Msa0754220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
