Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141230 | XP_003622024.1 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141230 | sp|Q9Y673|ALG5_HUMAN | 44.516 | 310 | 156 | 4 | 21 | 329 | 26 | 320 | 2.22e-86 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141230 | G7L022 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 665 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa1141230 | 0.806284 | 8.863408e-50 | -8.615850e-47 |
| Msa0679030 | Msa1141230 | 0.807451 | 5.021806e-50 | -8.615850e-47 |
| Msa1141230 | Msa1175200 | 0.816457 | 5.476602e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141230 | MtrunA17_Chr7g0223941 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141230 | AT2G39630.1 | 71.772 | 333 | 87 | 2 | 1 | 326 | 1 | 333 | 6.16e-180 | 501 |
| Msa1141230 | AT2G39630.3 | 65.044 | 226 | 72 | 2 | 1 | 219 | 1 | 226 | 1.83e-102 | 300 |
| Msa1141230 | AT2G39630.2 | 64.192 | 229 | 75 | 2 | 1 | 222 | 1 | 229 | 2.20e-102 | 300 |
| Msa1141230 | AT1G20575.1 | 23.045 | 243 | 154 | 7 | 65 | 300 | 16 | 232 | 3.56e-12 | 65.9 |
Find 123 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATATATTATTGATTTA+TGG | 0.092216 | 7_4:+14347141 | Msa1141230:three_prime_UTR |
| TGAGCTGCAATGATCGATTT+TGG | 0.155310 | 7_4:+14346663 | Msa1141230:exon |
| ATTACAGAAATCTCTGAAAT+TGG | 0.166321 | 7_4:-14346522 | None:intergenic |
| ATTTCACATTACCTTCAATT+AGG | 0.170725 | 7_4:-14340404 | None:intergenic |
| GACACCCCTGTTGTTGTATT+TGG | 0.206670 | 7_4:+14344523 | Msa1141230:CDS |
| TTTCAGAGATTTCTGTAATT+TGG | 0.214586 | 7_4:+14346526 | Msa1141230:CDS |
| TTTACCTCTTTCAATGAATT+AGG | 0.222866 | 7_4:-14341711 | None:intergenic |
| ATCACTATGATCTCACTATT+TGG | 0.238091 | 7_4:-14346709 | None:intergenic |
| ACAATATATTATTGATTTAT+GGG | 0.254432 | 7_4:+14347142 | Msa1141230:three_prime_UTR |
| GTTCCATCTTGTGGTTCTAT+TGG | 0.261838 | 7_4:+14344702 | Msa1141230:CDS |
| TTTCACATTACCTTCAATTA+GGG | 0.298343 | 7_4:-14340403 | None:intergenic |
| TTCGCTTTGACTTTGGTGTT+AGG | 0.315731 | 7_4:+14341493 | Msa1141230:CDS |
| TCACCATTCATGGCAGTAAA+TGG | 0.316836 | 7_4:+14347004 | Msa1141230:three_prime_UTR |
| AGATCGGGTCATTGAGGGTT+TGG | 0.321868 | 7_4:+14346781 | Msa1141230:three_prime_UTR |
| GTTCTATTGGCTGCTGGTCC+TGG | 0.327386 | 7_4:+14344715 | Msa1141230:CDS |
| GATAGCAGGTGGAAGATATT+AGG | 0.333862 | 7_4:+14341408 | Msa1141230:intron |
| AATGAGGAGCATAGGCTTCC+AGG | 0.338644 | 7_4:+14343007 | Msa1141230:CDS |
| AAAGTAAGGGTCATCCTTCT+TGG | 0.340897 | 7_4:+14344086 | Msa1141230:CDS |
| TGAGTATACCAAACATGGTT+TGG | 0.344421 | 7_4:+14346580 | Msa1141230:CDS |
| GATCGGGTCATTGAGGGTTT+GGG | 0.346170 | 7_4:+14346782 | Msa1141230:three_prime_UTR |
| ATGAAGGCACATTGAAGTTC+CGG | 0.352307 | 7_4:+14341674 | Msa1141230:intron |
| GTAGAATATGTTAACTTGAT+AGG | 0.355247 | 7_4:-14346908 | None:intergenic |
| GTGATACATTTAAAGTTTGT+AGG | 0.361970 | 7_4:+14346727 | Msa1141230:three_prime_UTR |
| GTGTTGTGGTTGTTTGGTGG+TGG | 0.364485 | 7_4:-14340292 | None:intergenic |
| TGTAATTTGGTCTGAGATCC+CGG | 0.366010 | 7_4:+14346539 | Msa1141230:CDS |
| GATTCTAGCTGTTGCCAAAA+AGG | 0.376100 | 7_4:+14344459 | Msa1141230:intron |
| CGTGAGCCAAATACAACAAC+AGG | 0.386480 | 7_4:-14344529 | None:intergenic |
| AGCTTCTGCTCATGTCTGTT+GGG | 0.388610 | 7_4:+14346604 | Msa1141230:CDS |
| ACGGTGGTGTTGTGGTTGTT+TGG | 0.397750 | 7_4:-14340298 | None:intergenic |
| ACAGATAACATTTCATTCTC+AGG | 0.398141 | 7_4:+14346929 | Msa1141230:three_prime_UTR |
| TTGGGTACAGGATCGGTATA+TGG | 0.400208 | 7_4:+14346622 | Msa1141230:CDS |
| AATACACAGTAGACAAAGTA+AGG | 0.406041 | 7_4:+14344072 | Msa1141230:CDS |
| GAGTATACCAAACATGGTTT+GGG | 0.406524 | 7_4:+14346581 | Msa1141230:CDS |
| TAGGGCTAACCATAACCTTC+CGG | 0.412922 | 7_4:+14346746 | Msa1141230:three_prime_UTR |
| TCGCTTTGACTTTGGTGTTA+GGG | 0.414292 | 7_4:+14341494 | Msa1141230:CDS |
| CCGGATTGTGCTGTTCAGAT+CGG | 0.415665 | 7_4:+14346765 | Msa1141230:three_prime_UTR |
| AGAAGCTCCCAAACCATGTT+TGG | 0.417258 | 7_4:-14346588 | None:intergenic |
| CAGCACAATCCGGAAGGTTA+TGG | 0.418024 | 7_4:-14346755 | None:intergenic |
| ATTGATGATGGAAGTGTTGA+TGG | 0.419572 | 7_4:+14344017 | Msa1141230:CDS |
| CTTGTGGTTCTATTGGCTGC+TGG | 0.420098 | 7_4:+14344709 | Msa1141230:CDS |
| TAAGCTGCATGATTATCTAC+TGG | 0.420597 | 7_4:+14347091 | Msa1141230:three_prime_UTR |
| TGAAAGAGAATATCTAACTA+TGG | 0.422445 | 7_4:+14346957 | Msa1141230:three_prime_UTR |
| TTACAGAAATCTCTGAAATT+GGG | 0.424378 | 7_4:-14346521 | None:intergenic |
| TGCTCATGTCTGTTGGGTAC+AGG | 0.426171 | 7_4:+14346610 | Msa1141230:CDS |
| TGTGACTTTCGCTTTGACTT+TGG | 0.430124 | 7_4:+14341486 | Msa1141230:CDS |
| GTTAGATATTCTCTTTCAAA+TGG | 0.431310 | 7_4:-14346952 | None:intergenic |
| GTGGATCGACGATTTGTTGT+TGG | 0.433018 | 7_4:-14340273 | None:intergenic |
| CGGATTGTGCTGTTCAGATC+GGG | 0.437469 | 7_4:+14346766 | Msa1141230:three_prime_UTR |
| GAGCTTCTGCTCATGTCTGT+TGG | 0.437630 | 7_4:+14346603 | Msa1141230:CDS |
| TTAGGGTTTGTTGAGAGAGA+TGG | 0.440347 | 7_4:-14340386 | None:intergenic |
| TCGACGATTTGTTGTTGGTT+GGG | 0.442343 | 7_4:-14340268 | None:intergenic |
| TTTCAAATGTCCGTTTGAAA+AGG | 0.450479 | 7_4:+14344946 | Msa1141230:CDS |
| TATCAAAGAGATATACTTTG+AGG | 0.458642 | 7_4:-14342972 | None:intergenic |
| AGAAGGTTCACCTTTGATCC+CGG | 0.459758 | 7_4:-14346558 | None:intergenic |
| TCTCAACAAACCCTAATTGA+AGG | 0.460473 | 7_4:+14340393 | Msa1141230:five_prime_UTR |
| TGCCATGATTTCTTCCAAGA+AGG | 0.466787 | 7_4:-14344100 | None:intergenic |
| GTGGTGTTGTGGTTGTTTGG+TGG | 0.468730 | 7_4:-14340295 | None:intergenic |
| CTGTTCAGATCGGGTCATTG+AGG | 0.472313 | 7_4:+14346775 | Msa1141230:three_prime_UTR |
| TGTTCAGATCGGGTCATTGA+GGG | 0.479158 | 7_4:+14346776 | Msa1141230:three_prime_UTR |
| ATCCTTCTTGGAAGAAATCA+TGG | 0.481408 | 7_4:+14344098 | Msa1141230:CDS |
| AACAACCACAACACCACCGT+CGG | 0.483702 | 7_4:+14340301 | Msa1141230:five_prime_UTR |
| CAGGTTGTAATTATTGATGA+TGG | 0.484794 | 7_4:+14344005 | Msa1141230:intron |
| TGATACATTTAAAGTTTGTA+GGG | 0.487516 | 7_4:+14346728 | Msa1141230:three_prime_UTR |
| GTGGTTTCAAGATGTTTACT+AGG | 0.489268 | 7_4:+14344904 | Msa1141230:CDS |
| CTTCTCATGCTTGACGCAGA+TGG | 0.489480 | 7_4:+14344291 | Msa1141230:CDS |
| TCATCTAGAGGAGAAAGCTT+TGG | 0.491656 | 7_4:+14344555 | Msa1141230:CDS |
| ACCTGTGTATCACGAATTCC+AGG | 0.495020 | 7_4:-14344733 | None:intergenic |
| GGATCCTAATTCATTGAAAG+AGG | 0.497503 | 7_4:+14341707 | Msa1141230:CDS |
| ATCGACGATTTGTTGTTGGT+TGG | 0.499319 | 7_4:-14340269 | None:intergenic |
| ATAGTTTCCTCAAGGGCACC+TGG | 0.501780 | 7_4:-14343025 | None:intergenic |
| CTTAACATCTGCAGAGGAAG+TGG | 0.502298 | 7_4:+14344656 | Msa1141230:intron |
| GTCTGAGATCCCGGGATCAA+AGG | 0.509062 | 7_4:+14346548 | Msa1141230:CDS |
| CTATTGTCTTTCATCAGAAG+TGG | 0.511720 | 7_4:+14340218 | None:intergenic |
| CTTCAGATCGACGATGGAGA+TGG | 0.514815 | 7_4:-14340344 | None:intergenic |
| CGTAGAGAAGTGATAAGGAA+TGG | 0.515559 | 7_4:+14341447 | Msa1141230:exon |
| GAAGGTTCACCTTTGATCCC+GGG | 0.515749 | 7_4:-14346557 | None:intergenic |
| GATGAAGGGGTTCCATCTTG+TGG | 0.515876 | 7_4:+14344693 | Msa1141230:CDS |
| AATACAAACTTGTGATCAGA+TGG | 0.520322 | 7_4:-14346879 | None:intergenic |
| CTATGCTCCTCATTGTATGC+AGG | 0.530642 | 7_4:-14342998 | None:intergenic |
| CCTTCTGAGTATACCAAACA+TGG | 0.531326 | 7_4:+14346575 | Msa1141230:CDS |
| ATACCATTTACTGCCATGAA+TGG | 0.533980 | 7_4:-14347007 | None:intergenic |
| CTTACATCATAGTTTCCTCA+AGG | 0.542131 | 7_4:-14343033 | None:intergenic |
| ATCGATCATTGCAGCTCATG+TGG | 0.544578 | 7_4:-14346658 | None:intergenic |
| TCTGCAACATCGTGCTTCAA+AGG | 0.544614 | 7_4:+14343691 | Msa1141230:CDS |
| CCGATCTGAACAGCACAATC+CGG | 0.548599 | 7_4:-14346765 | None:intergenic |
| TGGTTTCAAGATGTTTACTA+GGG | 0.549468 | 7_4:+14344905 | Msa1141230:CDS |
| AAGCTGCATGATTATCTACT+GGG | 0.554012 | 7_4:+14347092 | Msa1141230:three_prime_UTR |
| AATTTCGTAGAGAAGTGATA+AGG | 0.554286 | 7_4:+14341442 | Msa1141230:five_prime_UTR |
| CAGATCGACGATGGAGATGG+AGG | 0.556456 | 7_4:-14340341 | None:intergenic |
| ATGTCTGTTGGGTACAGGAT+CGG | 0.557307 | 7_4:+14346615 | Msa1141230:CDS |
| GTAATTTGGTCTGAGATCCC+GGG | 0.559378 | 7_4:+14346540 | Msa1141230:CDS |
| CTGCATACAATGAGGAGCAT+AGG | 0.559485 | 7_4:+14342999 | Msa1141230:CDS |
| TGGAGGGTGGTTGCAACAGT+TGG | 0.561894 | 7_4:-14340324 | None:intergenic |
| AAAGAGATATACTTTGAGGC+AGG | 0.564693 | 7_4:-14342968 | None:intergenic |
| CCATGTTTGGTATACTCAGA+AGG | 0.573386 | 7_4:-14346575 | None:intergenic |
| ATTCATGGCAGTAAATGGTA+TGG | 0.582656 | 7_4:+14347009 | Msa1141230:three_prime_UTR |
| GTTGGCCGACGGTGGTGTTG+TGG | 0.584792 | 7_4:-14340306 | None:intergenic |
| TTCTCACTTCAGATCGACGA+TGG | 0.594420 | 7_4:-14340350 | None:intergenic |
| GAGGCAGGATCAACAACATG+TGG | 0.594968 | 7_4:-14342953 | None:intergenic |
| GATAATTCCTGCATACAATG+AGG | 0.596035 | 7_4:+14342991 | Msa1141230:CDS |
| GGTACCTCGTACGAAAATGA+AGG | 0.600542 | 7_4:-14343716 | None:intergenic |
| TAGGCTTCCAGGTGCCCTTG+AGG | 0.603177 | 7_4:+14343018 | Msa1141230:CDS |
| CAGCCAATAGAACCACAAGA+TGG | 0.606665 | 7_4:-14344705 | None:intergenic |
| CTTGGAAGAAATCATGGCAA+GGG | 0.608322 | 7_4:+14344104 | Msa1141230:CDS |
| TCCTGGAATTCGTGATACAC+AGG | 0.615431 | 7_4:+14344732 | Msa1141230:CDS |
| TCTTGGAAGAAATCATGGCA+AGG | 0.615590 | 7_4:+14344103 | Msa1141230:CDS |
| AGATCGACGATGGAGATGGA+GGG | 0.615702 | 7_4:-14340340 | None:intergenic |
| TGTTTACTAGGGCTGCAGCT+AGG | 0.616348 | 7_4:+14344916 | Msa1141230:CDS |
| TGGTTGCAACAGTTGGCCGA+CGG | 0.616402 | 7_4:-14340317 | None:intergenic |
| TTGATGATGGAAGTGTTGAT+GGG | 0.623032 | 7_4:+14344018 | Msa1141230:CDS |
| GGATCAACAACATGTGGGCA+AGG | 0.624779 | 7_4:-14342947 | None:intergenic |
| TTACATCATAGTTTCCTCAA+GGG | 0.639281 | 7_4:-14343032 | None:intergenic |
| TTGCAACAGTTGGCCGACGG+TGG | 0.642482 | 7_4:-14340314 | None:intergenic |
| TCTGAACAGCACAATCCGGA+AGG | 0.644040 | 7_4:-14346761 | None:intergenic |
| GAATTACAACAGTCTACAGA+CGG | 0.644227 | 7_4:-14347032 | None:intergenic |
| TCGACGATGGAGATGGAGGG+TGG | 0.648105 | 7_4:-14340337 | None:intergenic |
| CAGGGAATGTTACACTCACG+CGG | 0.650212 | 7_4:+14344261 | Msa1141230:intron |
| TGGCTCACGAGCTCATCTAG+AGG | 0.655021 | 7_4:+14344543 | Msa1141230:CDS |
| TAATGGAGAACTTACAGTGG+CGG | 0.664686 | 7_4:-14341222 | None:intergenic |
| AGGCAGGATCAACAACATGT+GGG | 0.667598 | 7_4:-14342952 | None:intergenic |
| ATACACAGTAGACAAAGTAA+GGG | 0.692753 | 7_4:+14344073 | Msa1141230:CDS |
| GTGAGCCAAATACAACAACA+GGG | 0.713967 | 7_4:-14344528 | None:intergenic |
| TGAGCCAAATACAACAACAG+GGG | 0.761885 | 7_4:-14344527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTTTTTTTTT+TGG | - | chr7_4:14340756-14340775 | None:intergenic | 0.0% |
| !!! | ATTTATTTCAATTTTAAACT+AGG | + | chr7_4:14342382-14342401 | Msa1141230:intron | 10.0% |
| !!! | ATTTAATTCTTTTTTCATTT+AGG | + | chr7_4:14342922-14342941 | Msa1141230:intron | 10.0% |
| !! | TTCATATATATAATATATAG+AGG | - | chr7_4:14345231-14345250 | None:intergenic | 10.0% |
| !! | GATATTATAAAAAAAAAAAC+AGG | + | chr7_4:14345315-14345334 | Msa1141230:intron | 10.0% |
| !! | TAGTTTAAAGATAAATATAA+TGG | - | chr7_4:14345395-14345414 | None:intergenic | 10.0% |
| !!! | AAATTTCTGTTTATTAATTT+TGG | - | chr7_4:14345692-14345711 | None:intergenic | 10.0% |
| !!! | TACAATATATTATTGATTTA+TGG | + | chr7_4:14347141-14347160 | Msa1141230:three_prime_UTR | 10.0% |
| !!! | ACAATATATTATTGATTTAT+GGG | + | chr7_4:14347142-14347161 | Msa1141230:three_prime_UTR | 10.0% |
| !!! | TATGTCTAATTTTTTTTTGT+TGG | - | chr7_4:14340844-14340863 | None:intergenic | 15.0% |
| !! | CTAAATAAAGTACAAATATA+AGG | + | chr7_4:14342181-14342200 | Msa1141230:intron | 15.0% |
| !!! | TAATTTCTACTTTTATAAAC+TGG | + | chr7_4:14342623-14342642 | Msa1141230:intron | 15.0% |
| !! | TAGAAGATTATAGTTTAAAT+TGG | - | chr7_4:14344152-14344171 | None:intergenic | 15.0% |
| !! | TATATAATATATAGAGGAAA+AGG | - | chr7_4:14345225-14345244 | None:intergenic | 15.0% |
| !!! | TAGTTTGAAACAAATAATTA+TGG | - | chr7_4:14345292-14345311 | None:intergenic | 15.0% |
| !!! | AACTAGTTTTTTAACTTTTA+AGG | + | chr7_4:14345862-14345881 | Msa1141230:intron | 15.0% |
| !!! | ACTAGTTTTTTAACTTTTAA+GGG | + | chr7_4:14345863-14345882 | Msa1141230:intron | 15.0% |
| !!! | ATATGTGTATGTTTTTTTTT+TGG | + | chr7_4:14345915-14345934 | Msa1141230:intron | 15.0% |
| !!! | ATGAATAGTGTTTAATTTTA+AGG | + | chr7_4:14346028-14346047 | Msa1141230:intron | 15.0% |
| !! | TATTTAATCATATACAACTA+AGG | - | chr7_4:14346156-14346175 | None:intergenic | 15.0% |
| !!! | TAATCTAAATTTTAGTATAC+TGG | - | chr7_4:14346201-14346220 | None:intergenic | 15.0% |
| !!! | ATATTACATTTGTATTTTAG+TGG | + | chr7_4:14346319-14346338 | Msa1141230:intron | 15.0% |
| !!! | TTTTTACTGTTATTTATACT+AGG | + | chr7_4:14346814-14346833 | Msa1141230:three_prime_UTR | 15.0% |
| !! | AGTAACTAACAACAAATATT+AGG | + | chr7_4:14340800-14340819 | Msa1141230:intron | 20.0% |
| !! | TATGTCAGTTTATATTGAAA+GGG | + | chr7_4:14340974-14340993 | Msa1141230:intron | 20.0% |
| !! | GAAATCATCAATAATTGATT+CGG | - | chr7_4:14341021-14341040 | None:intergenic | 20.0% |
| !!! | TACTTTTGTATATGCTATAA+TGG | - | chr7_4:14341242-14341261 | None:intergenic | 20.0% |
| !!! | TTTGATTTCGATTTTTATGA+AGG | + | chr7_4:14341658-14341677 | Msa1141230:intron | 20.0% |
| !! | GAAATTTATATCTGTTTGTT+TGG | + | chr7_4:14341789-14341808 | Msa1141230:intron | 20.0% |
| !! | AGATAGAAGAGAAAAAAAAA+CGG | - | chr7_4:14341884-14341903 | None:intergenic | 20.0% |
| !! | ATGCGTATTATATTACAAAT+TGG | + | chr7_4:14342040-14342059 | Msa1141230:intron | 20.0% |
| !! | ATTGTTTGAATTATGAAGTT+TGG | + | chr7_4:14342103-14342122 | Msa1141230:intron | 20.0% |
| !! | TATATCAATATACACAATGA+AGG | - | chr7_4:14342778-14342797 | None:intergenic | 20.0% |
| !!! | ACTCTTTATTCTTTTATCAA+TGG | + | chr7_4:14343973-14343992 | Msa1141230:intron | 20.0% |
| !!! | CTCTTTATTCTTTTATCAAT+GGG | + | chr7_4:14343974-14343993 | Msa1141230:intron | 20.0% |
| !! | AAACAGAATATTAATATCTG+AGG | - | chr7_4:14344431-14344450 | None:intergenic | 20.0% |
| !! | AGGTTAAAAATTAATGAAGT+AGG | - | chr7_4:14344764-14344783 | None:intergenic | 20.0% |
| !! | GAACAATTTATGACAAAATA+AGG | - | chr7_4:14345067-14345086 | None:intergenic | 20.0% |
| !!! | AAAATTTTCTCTTTCTTTTC+TGG | - | chr7_4:14345351-14345370 | None:intergenic | 20.0% |
| !!! | TTAATTTTGGTTACACATTA+TGG | - | chr7_4:14345679-14345698 | None:intergenic | 20.0% |
| !! | AATTACTCAAATTCTAACTT+TGG | + | chr7_4:14345790-14345809 | Msa1141230:intron | 20.0% |
| !! | TACTAAAATTTAGATTATCG+AGG | + | chr7_4:14346204-14346223 | Msa1141230:intron | 20.0% |
| !!! | TGATACATTTAAAGTTTGTA+GGG | + | chr7_4:14346728-14346747 | Msa1141230:three_prime_UTR | 20.0% |
| ! | TTTCACATTACCTTCAATTA+GGG | - | chr7_4:14340406-14340425 | None:intergenic | 25.0% |
| ! | ATTTCACATTACCTTCAATT+AGG | - | chr7_4:14340407-14340426 | None:intergenic | 25.0% |
| ! | CAAAGAAGAATCATATTTGA+AGG | - | chr7_4:14340442-14340461 | None:intergenic | 25.0% |
| ! | AAATCAATAAGACTTTCTAC+TGG | - | chr7_4:14340618-14340637 | None:intergenic | 25.0% |
| ! | AAGAGGAATTTATGTTACTA+TGG | - | chr7_4:14340683-14340702 | None:intergenic | 25.0% |
| ! | TAGTAACATAAATTCCTCTT+AGG | + | chr7_4:14340683-14340702 | Msa1141230:intron | 25.0% |
| ! | AATTCCTCTTAGGAAATTTA+TGG | + | chr7_4:14340693-14340712 | Msa1141230:intron | 25.0% |
| ! | GTATGTCAGTTTATATTGAA+AGG | + | chr7_4:14340973-14340992 | Msa1141230:intron | 25.0% |
| ! | TTTACCTCTTTCAATGAATT+AGG | - | chr7_4:14341714-14341733 | None:intergenic | 25.0% |
| !! | TGCATTAGAAAATTAAGTTG+TGG | - | chr7_4:14341913-14341932 | None:intergenic | 25.0% |
| ! | TAAAACTTGTAGTCAATGAA+GGG | + | chr7_4:14341963-14341982 | Msa1141230:intron | 25.0% |
| ! | CCACACAAAACTTAAATTTA+TGG | - | chr7_4:14342359-14342378 | None:intergenic | 25.0% |
| !!! | CCATAAATTTAAGTTTTGTG+TGG | + | chr7_4:14342356-14342375 | Msa1141230:intron | 25.0% |
| !!! | ATTTTAATCCCAATTTCAAG+AGG | + | chr7_4:14342652-14342671 | Msa1141230:intron | 25.0% |
| ! | TATCAAAGAGATATACTTTG+AGG | - | chr7_4:14342975-14342994 | None:intergenic | 25.0% |
| !! | TTTCAACTTCTTTTTCTTCT+AGG | - | chr7_4:14343135-14343154 | None:intergenic | 25.0% |
| ! | TTAACTAATCTTTACAAGCT+TGG | - | chr7_4:14343191-14343210 | None:intergenic | 25.0% |
| !! | TTGTTTAAAGTTGTTACCTT+CGG | + | chr7_4:14343635-14343654 | Msa1141230:intron | 25.0% |
| ! | CATAAATAAAATTATGCCGA+AGG | - | chr7_4:14343654-14343673 | None:intergenic | 25.0% |
| ! | AAACAAACATTCAAAGAGAA+TGG | - | chr7_4:14343749-14343768 | None:intergenic | 25.0% |
| !! | TTGAATGTTTGTTTAGAATC+TGG | + | chr7_4:14343755-14343774 | Msa1141230:intron | 25.0% |
| !! | ACACTATCATTCAAATCTTT+TGG | + | chr7_4:14343897-14343916 | Msa1141230:intron | 25.0% |
| !! | TTTTGGTCTGATATACTTTA+TGG | + | chr7_4:14343914-14343933 | Msa1141230:intron | 25.0% |
| ! | TTGTACTTTATATCTTTCTG+TGG | + | chr7_4:14343946-14343965 | Msa1141230:intron | 25.0% |
| !!! | AATTCTACTTTTGCATTGAA+TGG | + | chr7_4:14344172-14344191 | Msa1141230:intron | 25.0% |
| !!! | ATTTTCAAGTTTTTCTAGGT+CGG | - | chr7_4:14344331-14344350 | None:intergenic | 25.0% |
| ! | AATAACATAGAGAATGAAGA+AGG | - | chr7_4:14344597-14344616 | None:intergenic | 25.0% |
| !!! | TACCGTAATTTTTTGATGAA+GGG | + | chr7_4:14344679-14344698 | Msa1141230:CDS | 25.0% |
| !! | AGAACAATTACCTTTTCAAA+CGG | - | chr7_4:14344959-14344978 | None:intergenic | 25.0% |
| ! | GGATTCTATGTTATTGATAT+TGG | + | chr7_4:14345574-14345593 | Msa1141230:intron | 25.0% |
| ! | AATTTGAGTAATTCTTAGCA+GGG | - | chr7_4:14345783-14345802 | None:intergenic | 25.0% |
| !!! | TGTGTATGTTTTTTTTTTGG+TGG | + | chr7_4:14345918-14345937 | Msa1141230:intron | 25.0% |
| ! | AAAACAACACACTAATTTCA+TGG | - | chr7_4:14346106-14346125 | None:intergenic | 25.0% |
| ! | GAAGATATTCAGTTTATGTT+TGG | + | chr7_4:14346295-14346314 | Msa1141230:intron | 25.0% |
| !!! | AAGACAAGTTGATTTAAGTT+AGG | + | chr7_4:14346347-14346366 | Msa1141230:intron | 25.0% |
| !!! | AGACAAGTTGATTTAAGTTA+GGG | + | chr7_4:14346348-14346367 | Msa1141230:intron | 25.0% |
| ! | TGTATGGTCATATGAAAATA+TGG | + | chr7_4:14346416-14346435 | Msa1141230:intron | 25.0% |
| !!! | AATTAGTCTTTTTGTGTAAG+TGG | + | chr7_4:14346490-14346509 | Msa1141230:CDS | 25.0% |
| !!! | TTACAGAAATCTCTGAAATT+GGG | - | chr7_4:14346524-14346543 | None:intergenic | 25.0% |
| !!! | ATTACAGAAATCTCTGAAAT+TGG | - | chr7_4:14346525-14346544 | None:intergenic | 25.0% |
| ! | TTTCAGAGATTTCTGTAATT+TGG | + | chr7_4:14346526-14346545 | Msa1141230:CDS | 25.0% |
| !! | GTGATACATTTAAAGTTTGT+AGG | + | chr7_4:14346727-14346746 | Msa1141230:three_prime_UTR | 25.0% |
| !! | GTAGAATATGTTAACTTGAT+AGG | - | chr7_4:14346911-14346930 | None:intergenic | 25.0% |
| ! | GTTAGATATTCTCTTTCAAA+TGG | - | chr7_4:14346955-14346974 | None:intergenic | 25.0% |
| ! | TGAAAGAGAATATCTAACTA+TGG | + | chr7_4:14346957-14346976 | Msa1141230:three_prime_UTR | 25.0% |
| CAACATTACAAAGAAGAACA+TGG | - | chr7_4:14340520-14340539 | None:intergenic | 30.0% | |
| AGAACCATAAATTTCCTAAG+AGG | - | chr7_4:14340700-14340719 | None:intergenic | 30.0% | |
| ! | TCTAAGTTGAGAAACAAGAT+GGG | + | chr7_4:14340930-14340949 | Msa1141230:intron | 30.0% |
| ! | ATTGATGATTTCAAGTCACT+CGG | + | chr7_4:14341029-14341048 | Msa1141230:intron | 30.0% |
| !!! | AGTTTATTTTAATGGCGAGA+TGG | + | chr7_4:14341171-14341190 | Msa1141230:intron | 30.0% |
| ! | AGAATTATGTGTTTGATAGC+AGG | + | chr7_4:14341394-14341413 | Msa1141230:intron | 30.0% |
| AATTTCGTAGAGAAGTGATA+AGG | + | chr7_4:14341442-14341461 | Msa1141230:five_prime_UTR | 30.0% | |
| GATAAAATGAGACTGAAATC+AGG | - | chr7_4:14341576-14341595 | None:intergenic | 30.0% | |
| ! | TTATATCTGTTTGTTTGGTG+AGG | + | chr7_4:14341794-14341813 | Msa1141230:intron | 30.0% |
| ! | TATATCTGTTTGTTTGGTGA+GGG | + | chr7_4:14341795-14341814 | Msa1141230:intron | 30.0% |
| GTAAAACTTGTAGTCAATGA+AGG | + | chr7_4:14341962-14341981 | Msa1141230:intron | 30.0% | |
| ATATAATACGCATGATTCTG+CGG | - | chr7_4:14342033-14342052 | None:intergenic | 30.0% | |
| GTTTGTATAATCTCCGAATA+TGG | + | chr7_4:14342145-14342164 | Msa1141230:intron | 30.0% | |
| TATGCTTCATGAGAATGATT+AGG | + | chr7_4:14342252-14342271 | Msa1141230:intron | 30.0% | |
| ATGCTTCATGAGAATGATTA+GGG | + | chr7_4:14342253-14342272 | Msa1141230:intron | 30.0% | |
| AACTATAGAACTGCAAATCA+TGG | - | chr7_4:14342476-14342495 | None:intergenic | 30.0% | |
| TCCACAATATTATTAAGCCA+GGG | + | chr7_4:14342575-14342594 | Msa1141230:intron | 30.0% | |
| GTCCATTTCACATAAATCTT+TGG | + | chr7_4:14342691-14342710 | Msa1141230:intron | 30.0% | |
| GTCCAAAGATTTATGTGAAA+TGG | - | chr7_4:14342696-14342715 | None:intergenic | 30.0% | |
| AGGCACATATGAAAATATCA+GGG | - | chr7_4:14342758-14342777 | None:intergenic | 30.0% | |
| AAGGCACATATGAAAATATC+AGG | - | chr7_4:14342759-14342778 | None:intergenic | 30.0% | |
| TCAAAAACCAGTTCATGATT+GGG | - | chr7_4:14342892-14342911 | None:intergenic | 30.0% | |
| TTACATCATAGTTTCCTCAA+GGG | - | chr7_4:14343035-14343054 | None:intergenic | 30.0% | |
| !! | ACTTCTTTTTCTTCTAGGAA+GGG | - | chr7_4:14343130-14343149 | None:intergenic | 30.0% |
| !! | AACTTCTTTTTCTTCTAGGA+AGG | - | chr7_4:14343131-14343150 | None:intergenic | 30.0% |
| ! | AATTTCATGCACTTTTCTGT+TGG | + | chr7_4:14343216-14343235 | Msa1141230:intron | 30.0% |
| GTATGTCCTACTCAAATAAA+CGG | - | chr7_4:14343244-14343263 | None:intergenic | 30.0% | |
| TAAGAAAAAGAGAGGAGAAT+AGG | + | chr7_4:14343345-14343364 | Msa1141230:intron | 30.0% | |
| AAGAAAAAGAGAGGAGAATA+GGG | + | chr7_4:14343346-14343365 | Msa1141230:intron | 30.0% | |
| CAATTGTAACAGAACATTCA+TGG | - | chr7_4:14343424-14343443 | None:intergenic | 30.0% | |
| AATGTTCTGTTACAATTGAG+TGG | + | chr7_4:14343426-14343445 | Msa1141230:intron | 30.0% | |
| GAGATAATATGAACAGGTAT+AGG | - | chr7_4:14343567-14343586 | None:intergenic | 30.0% | |
| AAAGTTCATGAGTGAAATAG+AGG | - | chr7_4:14343858-14343877 | None:intergenic | 30.0% | |
| CAGGTTGTAATTATTGATGA+TGG | + | chr7_4:14344005-14344024 | Msa1141230:intron | 30.0% | |
| AATACACAGTAGACAAAGTA+AGG | + | chr7_4:14344072-14344091 | Msa1141230:CDS | 30.0% | |
| ATACACAGTAGACAAAGTAA+GGG | + | chr7_4:14344073-14344092 | Msa1141230:CDS | 30.0% | |
| !!! | CCTGATTTTCAAGTTTTTCT+AGG | - | chr7_4:14344335-14344354 | None:intergenic | 30.0% |
| CCTAGAAAAACTTGAAAATC+AGG | + | chr7_4:14344332-14344351 | Msa1141230:CDS | 30.0% | |
| AAACTTGAAAATCAGGTTAC+TGG | + | chr7_4:14344339-14344358 | Msa1141230:intron | 30.0% | |
| CCATTATGATGTATACACAT+GGG | - | chr7_4:14344623-14344642 | None:intergenic | 30.0% | |
| ACCATTATGATGTATACACA+TGG | - | chr7_4:14344624-14344643 | None:intergenic | 30.0% | |
| !!! | GTACCGTAATTTTTTGATGA+AGG | + | chr7_4:14344678-14344697 | Msa1141230:CDS | 30.0% |
| !!! | ACCGTAATTTTTTGATGAAG+GGG | + | chr7_4:14344680-14344699 | Msa1141230:CDS | 30.0% |
| ACCCCTTCATCAAAAAATTA+CGG | - | chr7_4:14344684-14344703 | None:intergenic | 30.0% | |
| TGAGCATGTATATTTGATGT+TGG | + | chr7_4:14344844-14344863 | Msa1141230:intron | 30.0% | |
| TGGTTTCAAGATGTTTACTA+GGG | + | chr7_4:14344905-14344924 | Msa1141230:CDS | 30.0% | |
| TTTCAAATGTCCGTTTGAAA+AGG | + | chr7_4:14344946-14344965 | Msa1141230:CDS | 30.0% | |
| TGACAAATATGACAAGAAAG+AGG | - | chr7_4:14345102-14345121 | None:intergenic | 30.0% | |
| CCATATTAAAACCTATAGAC+AGG | - | chr7_4:14345179-14345198 | None:intergenic | 30.0% | |
| !! | CCTGTCTATAGGTTTTAATA+TGG | + | chr7_4:14345176-14345195 | Msa1141230:intron | 30.0% |
| GCAATGTCATGCTTATATTA+CGG | + | chr7_4:14345517-14345536 | Msa1141230:intron | 30.0% | |
| ACTAGAAAATAAGTAGCAAG+AGG | + | chr7_4:14345603-14345622 | Msa1141230:intron | 30.0% | |
| TGAGTTGTAGAAACAAAAAG+TGG | - | chr7_4:14345642-14345661 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTACACATTATGG+CGG | - | chr7_4:14345676-14345695 | None:intergenic | 30.0% |
| GAATTTGAGTAATTCTTAGC+AGG | - | chr7_4:14345784-14345803 | None:intergenic | 30.0% | |
| TTCTATCTTTCGTATTCTAG+AGG | - | chr7_4:14345821-14345840 | None:intergenic | 30.0% | |
| ATACGAAAGATAGAATATCG+TGG | + | chr7_4:14345826-14345845 | Msa1141230:intron | 30.0% | |
| !!! | GAAATTAGTGTGTTGTTTTC+TGG | + | chr7_4:14346107-14346126 | Msa1141230:intron | 30.0% |
| TTATACCTACCTATTCTGTA+TGG | + | chr7_4:14346400-14346419 | Msa1141230:intron | 30.0% | |
| TTCATATGACCATACAGAAT+AGG | - | chr7_4:14346412-14346431 | None:intergenic | 30.0% | |
| ! | TCTTTTTGTGTAAGTGGTTT+CGG | + | chr7_4:14346496-14346515 | Msa1141230:CDS | 30.0% |
| ATCACTATGATCTCACTATT+TGG | - | chr7_4:14346712-14346731 | None:intergenic | 30.0% | |
| AATACAAACTTGTGATCAGA+TGG | - | chr7_4:14346882-14346901 | None:intergenic | 30.0% | |
| ACAGATAACATTTCATTCTC+AGG | + | chr7_4:14346929-14346948 | Msa1141230:three_prime_UTR | 30.0% | |
| !! | TCTTTTTAACTCACCATTCA+TGG | + | chr7_4:14346994-14347013 | Msa1141230:three_prime_UTR | 30.0% |
| TCTCAACAAACCCTAATTGA+AGG | + | chr7_4:14340393-14340412 | Msa1141230:five_prime_UTR | 35.0% | |
| ! | CACAACTGAACGATCTTTTT+CGG | + | chr7_4:14340890-14340909 | Msa1141230:intron | 35.0% |
| ! | GTCTAAGTTGAGAAACAAGA+TGG | + | chr7_4:14340929-14340948 | Msa1141230:intron | 35.0% |
| ATACTATCTGCTAGATACTC+AGG | - | chr7_4:14340957-14340976 | None:intergenic | 35.0% | |
| !!! | TTATTTTAATGGCGAGATGG+CGG | + | chr7_4:14341174-14341193 | Msa1141230:five_prime_UTR | 35.0% |
| ! | CTATAATGGAGAACTTACAG+TGG | - | chr7_4:14341228-14341247 | None:intergenic | 35.0% |
| ATAAACAACACCAAACCACA+GGG | - | chr7_4:14341355-14341374 | None:intergenic | 35.0% | |
| AATAAACAACACCAAACCAC+AGG | - | chr7_4:14341356-14341375 | None:intergenic | 35.0% | |
| ! | ATTATGTGTTTGATAGCAGG+TGG | + | chr7_4:14341397-14341416 | Msa1141230:intron | 35.0% |
| GGATCCTAATTCATTGAAAG+AGG | + | chr7_4:14341707-14341726 | Msa1141230:CDS | 35.0% | |
| ! | GAAAAAAAAACGGACTCCAA+AGG | - | chr7_4:14341874-14341893 | None:intergenic | 35.0% |
| GACAATGGGAAACATATGTT+AGG | - | chr7_4:14342002-14342021 | None:intergenic | 35.0% | |
| TATAATACGCATGATTCTGC+GGG | - | chr7_4:14342032-14342051 | None:intergenic | 35.0% | |
| TGACATAGTCGATAAGTTAG+AGG | + | chr7_4:14342078-14342097 | Msa1141230:intron | 35.0% | |
| !! | ATTTTGAGTCCAGCCATATT+CGG | - | chr7_4:14342161-14342180 | None:intergenic | 35.0% |
| TATACAGTTCCTAAAGTAGC+TGG | + | chr7_4:14342225-14342244 | Msa1141230:intron | 35.0% | |
| AATGATAAACTCGACGCAAA+AGG | - | chr7_4:14342432-14342451 | None:intergenic | 35.0% | |
| CTCCACAATATTATTAAGCC+AGG | + | chr7_4:14342574-14342593 | Msa1141230:intron | 35.0% | |
| ACCCTGGCTTAATAATATTG+TGG | - | chr7_4:14342579-14342598 | None:intergenic | 35.0% | |
| ACAATATTATTAAGCCAGGG+TGG | + | chr7_4:14342578-14342597 | Msa1141230:intron | 35.0% | |
| TAATCCCAATTTCAAGAGGA+AGG | + | chr7_4:14342656-14342675 | Msa1141230:intron | 35.0% | |
| ACATCCTTCCTCTTGAAATT+GGG | - | chr7_4:14342663-14342682 | None:intergenic | 35.0% | |
| GTCAAAAACCAGTTCATGAT+TGG | - | chr7_4:14342893-14342912 | None:intergenic | 35.0% | |
| !! | AAAGAGATATACTTTGAGGC+AGG | - | chr7_4:14342971-14342990 | None:intergenic | 35.0% |
| GATAATTCCTGCATACAATG+AGG | + | chr7_4:14342991-14343010 | Msa1141230:CDS | 35.0% | |
| CTTACATCATAGTTTCCTCA+AGG | - | chr7_4:14343036-14343055 | None:intergenic | 35.0% | |
| AGCATTCATCTTGGTGAAAA+TGG | - | chr7_4:14343069-14343088 | None:intergenic | 35.0% | |
| !! | AACAGCAAAAGCATTCATCT+TGG | - | chr7_4:14343078-14343097 | None:intergenic | 35.0% |
| !! | CTTCTTTTTCTTCTAGGAAG+GGG | - | chr7_4:14343129-14343148 | None:intergenic | 35.0% |
| ATACTTCATACATAGAGCAG+TGG | + | chr7_4:14343260-14343279 | Msa1141230:intron | 35.0% | |
| AGAAAAAGAGAGGAGAATAG+GGG | + | chr7_4:14343347-14343366 | Msa1141230:intron | 35.0% | |
| ATTCTAACTAACTTCCAGCT+AGG | - | chr7_4:14343380-14343399 | None:intergenic | 35.0% | |
| GCTGGAAGTTAGTTAGAATA+TGG | + | chr7_4:14343381-14343400 | Msa1141230:intron | 35.0% | |
| GGAAGTTAGTTAGAATATGG+AGG | + | chr7_4:14343384-14343403 | Msa1141230:intron | 35.0% | |
| ACATTCAAAGAGAATGGAAC+TGG | - | chr7_4:14343743-14343762 | None:intergenic | 35.0% | |
| ! | GAAATAGAGGTTGTTTCACA+TGG | - | chr7_4:14343845-14343864 | None:intergenic | 35.0% |
| !! | ATTGATGATGGAAGTGTTGA+TGG | + | chr7_4:14344017-14344036 | Msa1141230:CDS | 35.0% |
| !! | TTGATGATGGAAGTGTTGAT+GGG | + | chr7_4:14344018-14344037 | Msa1141230:CDS | 35.0% |
| ! | GAGTAGCTTTCGATTTTGTA+AGG | + | chr7_4:14344048-14344067 | Msa1141230:CDS | 35.0% |
| ATCCTTCTTGGAAGAAATCA+TGG | + | chr7_4:14344098-14344117 | Msa1141230:CDS | 35.0% | |
| TTCTTCTTTCCTTGAAAGCA+TGG | + | chr7_4:14344233-14344252 | Msa1141230:intron | 35.0% | |
| !! | CTTGAAAGCATGGTTTTACA+GGG | + | chr7_4:14344243-14344262 | Msa1141230:intron | 35.0% |
| ! | ACTTGAATCTCCATCCTTTT+TGG | - | chr7_4:14344476-14344495 | None:intergenic | 35.0% |
| AAAAAGGATGGAGATTCAAG+TGG | + | chr7_4:14344475-14344494 | Msa1141230:CDS | 35.0% | |
| CCCATGTGTATACATCATAA+TGG | + | chr7_4:14344620-14344639 | Msa1141230:intron | 35.0% | |
| ! | CAGTGAAGCACTAAATAACA+GGG | - | chr7_4:14344805-14344824 | None:intergenic | 35.0% |
| ! | TCAGTGAAGCACTAAATAAC+AGG | - | chr7_4:14344806-14344825 | None:intergenic | 35.0% |
| GTGGTTTCAAGATGTTTACT+AGG | + | chr7_4:14344904-14344923 | Msa1141230:CDS | 35.0% | |
| TCGATTATGAAGTAACTCTC+AGG | - | chr7_4:14345017-14345036 | None:intergenic | 35.0% | |
| CAATTGAACTCATGATTCCT+TGG | + | chr7_4:14345255-14345274 | Msa1141230:intron | 35.0% | |
| !!! | CAAGGCATTTTTTAAGGCTT+AGG | + | chr7_4:14345492-14345511 | Msa1141230:intron | 35.0% |
| GGTAAAACAATATGGAGATC+AGG | - | chr7_4:14345762-14345781 | None:intergenic | 35.0% | |
| CTTAGCAGGGTAAAACAATA+TGG | - | chr7_4:14345770-14345789 | None:intergenic | 35.0% | |
| TTCGAGAAGCAAAGATTGAA+GGG | - | chr7_4:14345892-14345911 | None:intergenic | 35.0% | |
| ATTCGAGAAGCAAAGATTGA+AGG | - | chr7_4:14345893-14345912 | None:intergenic | 35.0% | |
| TTTAGATTATCGAGGAAGCT+TGG | + | chr7_4:14346212-14346231 | Msa1141230:intron | 35.0% | |
| TATGACCATACAGAATAGGT+AGG | - | chr7_4:14346408-14346427 | None:intergenic | 35.0% | |
| TGAGTATACCAAACATGGTT+TGG | + | chr7_4:14346580-14346599 | Msa1141230:CDS | 35.0% | |
| GAGTATACCAAACATGGTTT+GGG | + | chr7_4:14346581-14346600 | Msa1141230:CDS | 35.0% | |
| !! | ATCGATTTTGGGAAGAAAGT+TGG | + | chr7_4:14346675-14346694 | Msa1141230:three_prime_UTR | 35.0% |
| ATACCATTTACTGCCATGAA+TGG | - | chr7_4:14347010-14347029 | None:intergenic | 35.0% | |
| ATTCATGGCAGTAAATGGTA+TGG | + | chr7_4:14347009-14347028 | Msa1141230:three_prime_UTR | 35.0% | |
| GAATTACAACAGTCTACAGA+CGG | - | chr7_4:14347035-14347054 | None:intergenic | 35.0% | |
| TAAGCTGCATGATTATCTAC+TGG | + | chr7_4:14347091-14347110 | Msa1141230:three_prime_UTR | 35.0% | |
| AAGCTGCATGATTATCTACT+GGG | + | chr7_4:14347092-14347111 | Msa1141230:three_prime_UTR | 35.0% | |
| !! | TCGACGATTTGTTGTTGGTT+GGG | - | chr7_4:14340271-14340290 | None:intergenic | 40.0% |
| !! | ATCGACGATTTGTTGTTGGT+TGG | - | chr7_4:14340272-14340291 | None:intergenic | 40.0% |
| !! | TTAGGGTTTGTTGAGAGAGA+TGG | - | chr7_4:14340389-14340408 | None:intergenic | 40.0% |
| ACCAACAGATGGAAAACTCA+AGG | - | chr7_4:14340491-14340510 | None:intergenic | 40.0% | |
| CATGGTTTAACACCAACAGA+TGG | - | chr7_4:14340502-14340521 | None:intergenic | 40.0% | |
| ! | AAGCTACAGAGTTGGGATTT+TGG | - | chr7_4:14340562-14340581 | None:intergenic | 40.0% |
| TCAGCTAAAGCTACAGAGTT+GGG | - | chr7_4:14340569-14340588 | None:intergenic | 40.0% | |
| ! | TTAGGCAGTTGATTCAAGCA+TGG | + | chr7_4:14340818-14340837 | Msa1141230:intron | 40.0% |
| GAGCCAGACAAAAAAGTTTG+GGG | - | chr7_4:14341203-14341222 | None:intergenic | 40.0% | |
| GGAGCCAGACAAAAAAGTTT+GGG | - | chr7_4:14341204-14341223 | None:intergenic | 40.0% | |
| TAATGGAGAACTTACAGTGG+CGG | - | chr7_4:14341225-14341244 | None:intergenic | 40.0% | |
| !!! | TTTTTTCCAAACAGACCCTG+TGG | + | chr7_4:14341337-14341356 | Msa1141230:intron | 40.0% |
| GATAGCAGGTGGAAGATATT+AGG | + | chr7_4:14341408-14341427 | Msa1141230:intron | 40.0% | |
| CGTAGAGAAGTGATAAGGAA+TGG | + | chr7_4:14341447-14341466 | Msa1141230:exon | 40.0% | |
| ! | TGTGACTTTCGCTTTGACTT+TGG | + | chr7_4:14341486-14341505 | Msa1141230:CDS | 40.0% |
| !! | TTCGCTTTGACTTTGGTGTT+AGG | + | chr7_4:14341493-14341512 | Msa1141230:CDS | 40.0% |
| !! | TCGCTTTGACTTTGGTGTTA+GGG | + | chr7_4:14341494-14341513 | Msa1141230:CDS | 40.0% |
| ! | ATGAAGGCACATTGAAGTTC+CGG | + | chr7_4:14341674-14341693 | Msa1141230:intron | 40.0% |
| TTAGGATCCTCAAAAATCGC+CGG | - | chr7_4:14341696-14341715 | None:intergenic | 40.0% | |
| !! | TGTCTAGTCTTATCGACCTT+TGG | + | chr7_4:14341855-14341874 | Msa1141230:intron | 40.0% |
| ATAATACGCATGATTCTGCG+GGG | - | chr7_4:14342031-14342050 | None:intergenic | 40.0% | |
| GTATAATCTCCGAATATGGC+TGG | + | chr7_4:14342149-14342168 | Msa1141230:intron | 40.0% | |
| ! | GCATATCTTCCAGCTACTTT+AGG | - | chr7_4:14342237-14342256 | None:intergenic | 40.0% |
| TACAGTAACTTCAGCTGTTG+TGG | - | chr7_4:14342324-14342343 | None:intergenic | 40.0% | |
| !! | CTGCAAATCATGGTGTTACA+AGG | - | chr7_4:14342466-14342485 | None:intergenic | 40.0% |
| ATATTATTAAGCCAGGGTGG+TGG | + | chr7_4:14342581-14342600 | Msa1141230:intron | 40.0% | |
| TATTATTAAGCCAGGGTGGT+GGG | + | chr7_4:14342582-14342601 | Msa1141230:intron | 40.0% | |
| GACATCCTTCCTCTTGAAAT+TGG | - | chr7_4:14342664-14342683 | None:intergenic | 40.0% | |
| CACATAAATCTTTGGACACC+TGG | + | chr7_4:14342699-14342718 | Msa1141230:intron | 40.0% | |
| ACAGTATGTAGCCATCGAAA+GGG | + | chr7_4:14343160-14343179 | Msa1141230:intron | 40.0% | |
| TTGGCACCGTTTATTTGAGT+AGG | + | chr7_4:14343235-14343254 | Msa1141230:intron | 40.0% | |
| TAAACATCCTCTGGCCTATT+GGG | - | chr7_4:14343306-14343325 | None:intergenic | 40.0% | |
| TACGAGCGTAAGAAAAAGAG+AGG | + | chr7_4:14343337-14343356 | Msa1141230:intron | 40.0% | |
| CAGAAGATGGTATCTTTCTG+TGG | + | chr7_4:14343454-14343473 | Msa1141230:intron | 40.0% | |
| GCAGAGGAGATAATATGAAC+AGG | - | chr7_4:14343573-14343592 | None:intergenic | 40.0% | |
| AGCAGTTAAGTATAGAGCAG+AGG | - | chr7_4:14343589-14343608 | None:intergenic | 40.0% | |
| TTCAAAGAGAATGGAACTGG+AGG | - | chr7_4:14343740-14343759 | None:intergenic | 40.0% | |
| AAAGTAAGGGTCATCCTTCT+TGG | + | chr7_4:14344086-14344105 | Msa1141230:CDS | 40.0% | |
| TGCCATGATTTCTTCCAAGA+AGG | - | chr7_4:14344103-14344122 | None:intergenic | 40.0% | |
| TCTTGGAAGAAATCATGGCA+AGG | + | chr7_4:14344103-14344122 | Msa1141230:CDS | 40.0% | |
| CTTGGAAGAAATCATGGCAA+GGG | + | chr7_4:14344104-14344123 | Msa1141230:CDS | 40.0% | |
| CCTGTAAAACCATGCTTTCA+AGG | - | chr7_4:14344245-14344264 | None:intergenic | 40.0% | |
| !! | CCTTGAAAGCATGGTTTTAC+AGG | + | chr7_4:14344242-14344261 | Msa1141230:intron | 40.0% |
| ! | TTTTTCTAGGTCGGTGATCT+TGG | - | chr7_4:14344322-14344341 | None:intergenic | 40.0% |
| ! | GATTCTAGCTGTTGCCAAAA+AGG | + | chr7_4:14344459-14344478 | Msa1141230:intron | 40.0% |
| TGAGCCAAATACAACAACAG+GGG | - | chr7_4:14344530-14344549 | None:intergenic | 40.0% | |
| GTGAGCCAAATACAACAACA+GGG | - | chr7_4:14344531-14344550 | None:intergenic | 40.0% | |
| TCATCTAGAGGAGAAAGCTT+TGG | + | chr7_4:14344555-14344574 | Msa1141230:CDS | 40.0% | |
| ACTTAGCTTAACATCTGCAG+AGG | + | chr7_4:14344650-14344669 | Msa1141230:intron | 40.0% | |
| ! | GTTCCATCTTGTGGTTCTAT+TGG | + | chr7_4:14344702-14344721 | Msa1141230:CDS | 40.0% |
| ! | GGTACTGAAATCAGAAAGCA+AGG | - | chr7_4:14344784-14344803 | None:intergenic | 40.0% |
| !! | ATGCTCAAGCAAAAGCATTG+AGG | - | chr7_4:14344831-14344850 | None:intergenic | 40.0% |
| TTAGCTATGCTCCTGTCTAT+AGG | + | chr7_4:14345165-14345184 | Msa1141230:intron | 40.0% | |
| CATGATTCCTTGGTCTATCT+TGG | + | chr7_4:14345265-14345284 | Msa1141230:intron | 40.0% | |
| TTATGGTCCAAGATAGACCA+AGG | - | chr7_4:14345275-14345294 | None:intergenic | 40.0% | |
| GTCATATAAACATGCCACTG+CGG | - | chr7_4:14345454-14345473 | None:intergenic | 40.0% | |
| GCAGTGGCATGTTTATATGA+CGG | + | chr7_4:14345453-14345472 | Msa1141230:intron | 40.0% | |
| CCTTAAAAAATGCCTTGCCA+TGG | - | chr7_4:14345489-14345508 | None:intergenic | 40.0% | |
| !!! | CCATGGCAAGGCATTTTTTA+AGG | + | chr7_4:14345486-14345505 | Msa1141230:intron | 40.0% |
| TCTCAATAAATGCCTTCCCA+TGG | - | chr7_4:14345553-14345572 | None:intergenic | 40.0% | |
| !! | TGGGAAGGCATTTATTGAGA+AGG | + | chr7_4:14345553-14345572 | Msa1141230:intron | 40.0% |
| CGAAAGATAGAATATCGTGG+AGG | + | chr7_4:14345829-14345848 | Msa1141230:intron | 40.0% | |
| GGAACTAGACACTAGATCAT+TGG | - | chr7_4:14346085-14346104 | None:intergenic | 40.0% | |
| ACTTAACTGTATTTCTCCGC+AGG | + | chr7_4:14346451-14346470 | Msa1141230:intron | 40.0% | |
| ! | TGTAATTTGGTCTGAGATCC+CGG | + | chr7_4:14346539-14346558 | Msa1141230:CDS | 40.0% |
| CCATGTTTGGTATACTCAGA+AGG | - | chr7_4:14346578-14346597 | None:intergenic | 40.0% | |
| CCTTCTGAGTATACCAAACA+TGG | + | chr7_4:14346575-14346594 | Msa1141230:CDS | 40.0% | |
| !! | TGAGCTGCAATGATCGATTT+TGG | + | chr7_4:14346663-14346682 | Msa1141230:exon | 40.0% |
| !! | GAGCTGCAATGATCGATTTT+GGG | + | chr7_4:14346664-14346683 | Msa1141230:exon | 40.0% |
| TCACCATTCATGGCAGTAAA+TGG | + | chr7_4:14347004-14347023 | Msa1141230:three_prime_UTR | 40.0% | |
| !! | GTGGATCGACGATTTGTTGT+TGG | - | chr7_4:14340276-14340295 | None:intergenic | 45.0% |
| TTCTCACTTCAGATCGACGA+TGG | - | chr7_4:14340353-14340372 | None:intergenic | 45.0% | |
| ! | GCCTTGAGTTTTCCATCTGT+TGG | + | chr7_4:14340487-14340506 | Msa1141230:intron | 45.0% |
| GTCAGCTAAAGCTACAGAGT+TGG | - | chr7_4:14340570-14340589 | None:intergenic | 45.0% | |
| CCAGACAAAAAAGTTTGGGG+TGG | - | chr7_4:14341200-14341219 | None:intergenic | 45.0% | |
| !!! | CCACCCCAAACTTTTTTGTC+TGG | + | chr7_4:14341197-14341216 | Msa1141230:five_prime_UTR | 45.0% |
| CGGAGCCAGACAAAAAAGTT+TGG | - | chr7_4:14341205-14341224 | None:intergenic | 45.0% | |
| ! | TGAAGTTCCGGCGATTTTTG+AGG | + | chr7_4:14341686-14341705 | Msa1141230:CDS | 45.0% |
| CTTGTAGTCAATGAAGGGTG+TGG | + | chr7_4:14341968-14341987 | Msa1141230:intron | 45.0% | |
| GATAGCTCCCAATCATGAAC+TGG | + | chr7_4:14342882-14342901 | Msa1141230:intron | 45.0% | |
| AGGCAGGATCAACAACATGT+GGG | - | chr7_4:14342955-14342974 | None:intergenic | 45.0% | |
| CTATGCTCCTCATTGTATGC+AGG | - | chr7_4:14343001-14343020 | None:intergenic | 45.0% | |
| ! | CTGCATACAATGAGGAGCAT+AGG | + | chr7_4:14342999-14343018 | Msa1141230:CDS | 45.0% |
| CACAGTATGTAGCCATCGAA+AGG | + | chr7_4:14343159-14343178 | Msa1141230:intron | 45.0% | |
| !! | GCTTGGTTTTTCCCTTTCGA+TGG | - | chr7_4:14343174-14343193 | None:intergenic | 45.0% |
| !! | CAGTTGATAGGTTGCCCAAT+AGG | + | chr7_4:14343289-14343308 | Msa1141230:intron | 45.0% |
| CTAAACATCCTCTGGCCTAT+TGG | - | chr7_4:14343307-14343326 | None:intergenic | 45.0% | |
| ATAGGCCAGAGGATGTTTAG+TGG | + | chr7_4:14343307-14343326 | Msa1141230:intron | 45.0% | |
| TAGGCCAGAGGATGTTTAGT+GGG | + | chr7_4:14343308-14343327 | Msa1141230:intron | 45.0% | |
| TTGAGTGGAGAAGCAGAAGA+TGG | + | chr7_4:14343441-14343460 | Msa1141230:intron | 45.0% | |
| GAGCTCACTACAGTGGATAA+TGG | - | chr7_4:14343499-14343518 | None:intergenic | 45.0% | |
| TCTGCAACATCGTGCTTCAA+AGG | + | chr7_4:14343691-14343710 | Msa1141230:CDS | 45.0% | |
| ! | GGATCCTTCATTTTCGTACG+AGG | + | chr7_4:14343712-14343731 | Msa1141230:CDS | 45.0% |
| GGTACCTCGTACGAAAATGA+AGG | - | chr7_4:14343719-14343738 | None:intergenic | 45.0% | |
| TTATCAATGGGCACTTGAGC+AGG | + | chr7_4:14343986-14344005 | Msa1141230:intron | 45.0% | |
| GCTGTGTCACATTATGCTTG+TGG | + | chr7_4:14344194-14344213 | Msa1141230:intron | 45.0% | |
| CTAGCTGTTGCCAAAAAGGA+TGG | + | chr7_4:14344463-14344482 | Msa1141230:CDS | 45.0% | |
| GACACCCCTGTTGTTGTATT+TGG | + | chr7_4:14344523-14344542 | Msa1141230:CDS | 45.0% | |
| CGTGAGCCAAATACAACAAC+AGG | - | chr7_4:14344532-14344551 | None:intergenic | 45.0% | |
| GCTTTGGCTACAGTTAAGCT+CGG | + | chr7_4:14344571-14344590 | Msa1141230:intron | 45.0% | |
| CTTAACATCTGCAGAGGAAG+TGG | + | chr7_4:14344656-14344675 | Msa1141230:intron | 45.0% | |
| CAGCCAATAGAACCACAAGA+TGG | - | chr7_4:14344708-14344727 | None:intergenic | 45.0% | |
| TCCTGGAATTCGTGATACAC+AGG | + | chr7_4:14344732-14344751 | Msa1141230:CDS | 45.0% | |
| ACCTGTGTATCACGAATTCC+AGG | - | chr7_4:14344736-14344755 | None:intergenic | 45.0% | |
| CACTGTGAATGTGCAAAGTC+AGG | - | chr7_4:14344885-14344904 | None:intergenic | 45.0% | |
| GACTTTGCACATTCACAGTG+TGG | + | chr7_4:14344885-14344904 | Msa1141230:intron | 45.0% | |
| ! | AGTGTTGTTAAATGCCGCAG+TGG | + | chr7_4:14345437-14345456 | Msa1141230:intron | 45.0% |
| ATTACGGATTCCGCTATCCA+TGG | + | chr7_4:14345533-14345552 | Msa1141230:intron | 45.0% | |
| TTACGGATTCCGCTATCCAT+GGG | + | chr7_4:14345534-14345553 | Msa1141230:intron | 45.0% | |
| AAATGCCTTCCCATGGATAG+CGG | - | chr7_4:14345546-14345565 | None:intergenic | 45.0% | |
| TAACTGTATTTCTCCGCAGG+TGG | + | chr7_4:14346454-14346473 | Msa1141230:intron | 45.0% | |
| ! | GTAATTTGGTCTGAGATCCC+GGG | + | chr7_4:14346540-14346559 | Msa1141230:CDS | 45.0% |
| AGAAGGTTCACCTTTGATCC+CGG | - | chr7_4:14346561-14346580 | None:intergenic | 45.0% | |
| AGAAGCTCCCAAACCATGTT+TGG | - | chr7_4:14346591-14346610 | None:intergenic | 45.0% | |
| AGCTTCTGCTCATGTCTGTT+GGG | + | chr7_4:14346604-14346623 | Msa1141230:CDS | 45.0% | |
| ATGTCTGTTGGGTACAGGAT+CGG | + | chr7_4:14346615-14346634 | Msa1141230:CDS | 45.0% | |
| TTGGGTACAGGATCGGTATA+TGG | + | chr7_4:14346622-14346641 | Msa1141230:CDS | 45.0% | |
| ATCGATCATTGCAGCTCATG+TGG | - | chr7_4:14346661-14346680 | None:intergenic | 45.0% | |
| TAGGGCTAACCATAACCTTC+CGG | + | chr7_4:14346746-14346765 | Msa1141230:three_prime_UTR | 45.0% | |
| TGTTCAGATCGGGTCATTGA+GGG | + | chr7_4:14346776-14346795 | Msa1141230:three_prime_UTR | 45.0% | |
| !!! | TATATTTTAGTTTATTTTAA+TGG | + | chr7_4:14341163-14341182 | Msa1141230:intron | 5.0% |
| ! | GTGTTGTGGTTGTTTGGTGG+TGG | - | chr7_4:14340295-14340314 | None:intergenic | 50.0% |
| !! | GTGGTGTTGTGGTTGTTTGG+TGG | - | chr7_4:14340298-14340317 | None:intergenic | 50.0% |
| !! | ACGGTGGTGTTGTGGTTGTT+TGG | - | chr7_4:14340301-14340320 | None:intergenic | 50.0% |
| AACAACCACAACACCACCGT+CGG | + | chr7_4:14340301-14340320 | Msa1141230:five_prime_UTR | 50.0% | |
| AGATCGACGATGGAGATGGA+GGG | - | chr7_4:14340343-14340362 | None:intergenic | 50.0% | |
| CTTCAGATCGACGATGGAGA+TGG | - | chr7_4:14340347-14340366 | None:intergenic | 50.0% | |
| TCCAAACAGACCCTGTGGTT+TGG | + | chr7_4:14341342-14341361 | Msa1141230:intron | 50.0% | |
| ACCAAACCACAGGGTCTGTT+TGG | - | chr7_4:14341346-14341365 | None:intergenic | 50.0% | |
| ! | CTGTTTGTTTGGTGAGGGAG+AGG | + | chr7_4:14341800-14341819 | Msa1141230:intron | 50.0% |
| ! | TTTGTTTGGTGAGGGAGAGG+AGG | + | chr7_4:14341803-14341822 | Msa1141230:intron | 50.0% |
| ! | TTGTTTGGTGAGGGAGAGGA+GGG | + | chr7_4:14341804-14341823 | Msa1141230:intron | 50.0% |
| ! | CAATGAAGGGTGTGGAGACA+TGG | + | chr7_4:14341976-14341995 | Msa1141230:intron | 50.0% |
| CTGCGGGGTAAAACGACAAT+GGG | - | chr7_4:14342016-14342035 | None:intergenic | 50.0% | |
| TCTGCGGGGTAAAACGACAA+TGG | - | chr7_4:14342017-14342036 | None:intergenic | 50.0% | |
| GGGCACAGTGTGCTGAATTT+GGG | - | chr7_4:14342738-14342757 | None:intergenic | 50.0% | |
| AGGGCACAGTGTGCTGAATT+TGG | - | chr7_4:14342739-14342758 | None:intergenic | 50.0% | |
| GGATCAACAACATGTGGGCA+AGG | - | chr7_4:14342950-14342969 | None:intergenic | 50.0% | |
| GAGGCAGGATCAACAACATG+TGG | - | chr7_4:14342956-14342975 | None:intergenic | 50.0% | |
| ! | AATGAGGAGCATAGGCTTCC+AGG | + | chr7_4:14343007-14343026 | Msa1141230:CDS | 50.0% |
| !! | ATAGTTTCCTCAAGGGCACC+TGG | - | chr7_4:14343028-14343047 | None:intergenic | 50.0% |
| TGAGCCCACTAAACATCCTC+TGG | - | chr7_4:14343315-14343334 | None:intergenic | 50.0% | |
| AAGAGAGGAGAATAGGGGAG+AGG | + | chr7_4:14343352-14343371 | Msa1141230:intron | 50.0% | |
| AGAGACTGAGCTCACTACAG+TGG | - | chr7_4:14343506-14343525 | None:intergenic | 50.0% | |
| CAGGGAATGTTACACTCACG+CGG | + | chr7_4:14344261-14344280 | Msa1141230:intron | 50.0% | |
| CTTCTCATGCTTGACGCAGA+TGG | + | chr7_4:14344291-14344310 | Msa1141230:CDS | 50.0% | |
| GATGAAGGGGTTCCATCTTG+TGG | + | chr7_4:14344693-14344712 | Msa1141230:CDS | 50.0% | |
| ! | CTTGTGGTTCTATTGGCTGC+TGG | + | chr7_4:14344709-14344728 | Msa1141230:CDS | 50.0% |
| TGTTTACTAGGGCTGCAGCT+AGG | + | chr7_4:14344916-14344935 | Msa1141230:CDS | 50.0% | |
| !! | ATGACGGATTCTGCTGTCCA+TGG | + | chr7_4:14345469-14345488 | Msa1141230:intron | 50.0% |
| ! | CACATTATGGCGGAGAAGCT+AGG | - | chr7_4:14345666-14345685 | None:intergenic | 50.0% |
| ! | CAACATCAAAGCACCACCTG+CGG | - | chr7_4:14346470-14346489 | None:intergenic | 50.0% |
| GAAGGTTCACCTTTGATCCC+GGG | - | chr7_4:14346560-14346579 | None:intergenic | 50.0% | |
| GAGCTTCTGCTCATGTCTGT+TGG | + | chr7_4:14346603-14346622 | Msa1141230:CDS | 50.0% | |
| TGCTCATGTCTGTTGGGTAC+AGG | + | chr7_4:14346610-14346629 | Msa1141230:CDS | 50.0% | |
| CAGCACAATCCGGAAGGTTA+TGG | - | chr7_4:14346758-14346777 | None:intergenic | 50.0% | |
| TCTGAACAGCACAATCCGGA+AGG | - | chr7_4:14346764-14346783 | None:intergenic | 50.0% | |
| CCGATCTGAACAGCACAATC+CGG | - | chr7_4:14346768-14346787 | None:intergenic | 50.0% | |
| ! | CCGGATTGTGCTGTTCAGAT+CGG | + | chr7_4:14346765-14346784 | Msa1141230:three_prime_UTR | 50.0% |
| ! | CGGATTGTGCTGTTCAGATC+GGG | + | chr7_4:14346766-14346785 | Msa1141230:three_prime_UTR | 50.0% |
| CTGTTCAGATCGGGTCATTG+AGG | + | chr7_4:14346775-14346794 | Msa1141230:three_prime_UTR | 50.0% | |
| AGATCGGGTCATTGAGGGTT+TGG | + | chr7_4:14346781-14346800 | Msa1141230:three_prime_UTR | 50.0% | |
| GATCGGGTCATTGAGGGTTT+GGG | + | chr7_4:14346782-14346801 | Msa1141230:three_prime_UTR | 50.0% | |
| TGGTTGCAACAGTTGGCCGA+CGG | - | chr7_4:14340320-14340339 | None:intergenic | 55.0% | |
| TGGAGGGTGGTTGCAACAGT+TGG | - | chr7_4:14340327-14340346 | None:intergenic | 55.0% | |
| CAGATCGACGATGGAGATGG+AGG | - | chr7_4:14340344-14340363 | None:intergenic | 55.0% | |
| CTTTGGACACCTGGCATGCA+AGG | + | chr7_4:14342708-14342727 | Msa1141230:intron | 55.0% | |
| TTGGGATGTCCTTGCATGCC+AGG | - | chr7_4:14342720-14342739 | None:intergenic | 55.0% | |
| CAGTGGTGTGCGCAGTTGAT+AGG | + | chr7_4:14343277-14343296 | Msa1141230:intron | 55.0% | |
| TAGGTTGCCCAATAGGCCAG+AGG | + | chr7_4:14343296-14343315 | Msa1141230:intron | 55.0% | |
| TGGCTCACGAGCTCATCTAG+AGG | + | chr7_4:14344543-14344562 | Msa1141230:CDS | 55.0% | |
| ! | GTTCTATTGGCTGCTGGTCC+TGG | + | chr7_4:14344715-14344734 | Msa1141230:CDS | 55.0% |
| GGATTCTGCTGTCCATGGCA+AGG | + | chr7_4:14345474-14345493 | Msa1141230:intron | 55.0% | |
| GGATTCCGCTATCCATGGGA+AGG | + | chr7_4:14345538-14345557 | Msa1141230:intron | 55.0% | |
| ! | GTCTGAGATCCCGGGATCAA+AGG | + | chr7_4:14346548-14346567 | Msa1141230:CDS | 55.0% |
| TTGCAACAGTTGGCCGACGG+TGG | - | chr7_4:14340317-14340336 | None:intergenic | 60.0% | |
| TCGACGATGGAGATGGAGGG+TGG | - | chr7_4:14340340-14340359 | None:intergenic | 60.0% | |
| TCACGAAATGCCCACCACCC+TGG | - | chr7_4:14342595-14342614 | None:intergenic | 60.0% | |
| TAGGCTTCCAGGTGCCCTTG+AGG | + | chr7_4:14343018-14343037 | Msa1141230:CDS | 60.0% | |
| !! | ATAGGGGAGAGGTGCCTAGC+TGG | + | chr7_4:14343363-14343382 | Msa1141230:intron | 60.0% |
| ! | GTTGGCCGACGGTGGTGTTG+TGG | - | chr7_4:14340309-14340328 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 14340220 | 14347202 | 14340220 | ID=Msa1141230;Name=Msa1141230 |
| chr7_4 | mRNA | 14340220 | 14347202 | 14340220 | ID=Msa1141230-mRNA-1;Parent=Msa1141230;Name=Msa1141230-mRNA-1;_AED=0.10;_eAED=0.10;_QI=302|1|1|1|0.81|0.83|12|537|330 |
| chr7_4 | exon | 14340220 | 14340414 | 14340220 | ID=Msa1141230-mRNA-1:exon:3341;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14341173 | 14341229 | 14341173 | ID=Msa1141230-mRNA-1:exon:3342;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14341416 | 14341566 | 14341416 | ID=Msa1141230-mRNA-1:exon:3343;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14341680 | 14341728 | 14341680 | ID=Msa1141230-mRNA-1:exon:3344;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14342944 | 14343050 | 14342944 | ID=Msa1141230-mRNA-1:exon:3345;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14343688 | 14343733 | 14343688 | ID=Msa1141230-mRNA-1:exon:3346;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14344008 | 14344142 | 14344008 | ID=Msa1141230-mRNA-1:exon:3347;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14344264 | 14344353 | 14344264 | ID=Msa1141230-mRNA-1:exon:3348;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14344460 | 14344582 | 14344460 | ID=Msa1141230-mRNA-1:exon:3349;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14344670 | 14344753 | 14344670 | ID=Msa1141230-mRNA-1:exon:3350;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14344903 | 14344967 | 14344903 | ID=Msa1141230-mRNA-1:exon:3351;Parent=Msa1141230-mRNA-1 |
| chr7_4 | exon | 14346473 | 14347202 | 14346473 | ID=Msa1141230-mRNA-1:exon:3352;Parent=Msa1141230-mRNA-1 |
| chr7_4 | five_prime_UTR | 14340220 | 14340414 | 14340220 | ID=Msa1141230-mRNA-1:five_prime_utr;Parent=Msa1141230-mRNA-1 |
| chr7_4 | five_prime_UTR | 14341173 | 14341229 | 14341173 | ID=Msa1141230-mRNA-1:five_prime_utr;Parent=Msa1141230-mRNA-1 |
| chr7_4 | five_prime_UTR | 14341416 | 14341465 | 14341416 | ID=Msa1141230-mRNA-1:five_prime_utr;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14341466 | 14341566 | 14341466 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14341680 | 14341728 | 14341680 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14342944 | 14343050 | 14342944 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14343688 | 14343733 | 14343688 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14344008 | 14344142 | 14344008 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14344264 | 14344353 | 14344264 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14344460 | 14344582 | 14344460 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14344670 | 14344753 | 14344670 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14344903 | 14344967 | 14344903 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | CDS | 14346473 | 14346665 | 14346473 | ID=Msa1141230-mRNA-1:cds;Parent=Msa1141230-mRNA-1 |
| chr7_4 | three_prime_UTR | 14346666 | 14347202 | 14346666 | ID=Msa1141230-mRNA-1:three_prime_utr;Parent=Msa1141230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
