Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1144120 | XP_013458436.1 | 89.154 | 544 | 34 | 5 | 14 | 532 | 987 | 1530 | 0.0 | 954 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1144120 | sp|F4K5J1|MYO17_ARATH | 69.399 | 549 | 140 | 6 | 9 | 532 | 982 | 1527 | 0.0 | 724 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1144120 | A0A072US24 | 89.154 | 544 | 34 | 5 | 14 | 532 | 987 | 1530 | 0.0 | 954 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0259830 | Msa1144120 | 0.807124 | 5.892295e-50 | -8.615850e-47 |
Msa1144120 | Msa1144150 | 0.869185 | 3.742874e-66 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1144120 | MtrunA17_Chr4g0070771 | 89.154 | 544 | 34 | 5 | 14 | 532 | 987 | 1530 | 0.0 | 954 |
Msa1144120 | MtrunA17_Chr1g0183001 | 47.004 | 534 | 246 | 12 | 18 | 527 | 991 | 1511 | 1.20e-145 | 455 |
Msa1144120 | MtrunA17_Chr7g0262581 | 44.673 | 535 | 257 | 12 | 18 | 528 | 990 | 1509 | 8.44e-134 | 423 |
Msa1144120 | MtrunA17_Chr2g0309291 | 42.662 | 586 | 254 | 14 | 20 | 528 | 994 | 1574 | 2.51e-132 | 420 |
Msa1144120 | MtrunA17_Chr3g0136351 | 45.521 | 413 | 191 | 8 | 140 | 530 | 32 | 432 | 7.78e-115 | 347 |
Msa1144120 | MtrunA17_Chr1g0151061 | 41.635 | 526 | 241 | 13 | 42 | 527 | 1012 | 1511 | 4.91e-114 | 369 |
Msa1144120 | MtrunA17_Chr7g0274371 | 56.173 | 324 | 107 | 7 | 57 | 353 | 1 | 316 | 4.02e-102 | 310 |
Msa1144120 | MtrunA17_Chr7g0274381 | 63.784 | 185 | 46 | 4 | 355 | 532 | 43 | 213 | 9.77e-78 | 243 |
Msa1144120 | MtrunA17_Chr1g0164261 | 44.856 | 243 | 108 | 6 | 261 | 491 | 27 | 255 | 2.29e-65 | 213 |
Msa1144120 | MtrunA17_Chr1g0164241 | 42.735 | 117 | 51 | 2 | 375 | 491 | 1 | 101 | 2.55e-27 | 105 |
Msa1144120 | MtrunA17_Chr1g0164271 | 30.041 | 243 | 107 | 6 | 10 | 241 | 831 | 1021 | 4.74e-18 | 88.2 |
Msa1144120 | MtrunA17_Chr1g0164251 | 36.283 | 113 | 52 | 3 | 140 | 241 | 6 | 109 | 1.67e-14 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1144120 | AT5G20490.3 | 69.399 | 549 | 140 | 6 | 9 | 532 | 916 | 1461 | 0.0 | 724 |
Msa1144120 | AT5G20490.2 | 69.399 | 549 | 140 | 6 | 9 | 532 | 982 | 1527 | 0.0 | 724 |
Msa1144120 | AT5G20490.1 | 69.399 | 549 | 140 | 6 | 9 | 532 | 981 | 1526 | 0.0 | 723 |
Msa1144120 | AT1G17580.1 | 61.142 | 543 | 172 | 10 | 19 | 532 | 988 | 1520 | 0.0 | 634 |
Msa1144120 | AT1G54560.2 | 60.998 | 541 | 178 | 11 | 19 | 532 | 992 | 1526 | 0.0 | 620 |
Msa1144120 | AT1G54560.1 | 60.998 | 541 | 178 | 11 | 19 | 532 | 995 | 1529 | 0.0 | 620 |
Msa1144120 | AT1G08730.1 | 58.834 | 566 | 188 | 11 | 3 | 532 | 982 | 1538 | 0.0 | 579 |
Msa1144120 | AT1G08730.2 | 58.834 | 566 | 188 | 11 | 3 | 532 | 974 | 1530 | 0.0 | 578 |
Msa1144120 | AT1G04160.1 | 45.131 | 534 | 246 | 14 | 18 | 527 | 989 | 1499 | 2.22e-130 | 414 |
Msa1144120 | AT2G31900.3 | 43.447 | 557 | 245 | 13 | 34 | 528 | 746 | 1294 | 2.07e-127 | 403 |
Msa1144120 | AT2G31900.4 | 43.627 | 557 | 243 | 12 | 34 | 528 | 1004 | 1551 | 1.32e-126 | 404 |
Msa1144120 | AT2G31900.1 | 43.627 | 557 | 243 | 12 | 34 | 528 | 1004 | 1551 | 1.32e-126 | 404 |
Msa1144120 | AT2G31900.5 | 43.447 | 557 | 245 | 13 | 34 | 528 | 889 | 1437 | 1.43e-126 | 403 |
Msa1144120 | AT2G31900.2 | 43.447 | 557 | 245 | 13 | 34 | 528 | 1004 | 1552 | 9.21e-126 | 402 |
Msa1144120 | AT4G28710.1 | 44.123 | 519 | 257 | 11 | 34 | 528 | 1007 | 1516 | 1.23e-123 | 396 |
Msa1144120 | AT5G43900.1 | 43.925 | 535 | 257 | 16 | 18 | 527 | 988 | 1504 | 6.02e-119 | 383 |
Msa1144120 | AT5G43900.2 | 43.925 | 535 | 257 | 16 | 18 | 527 | 1045 | 1561 | 8.97e-119 | 383 |
Msa1144120 | AT5G43900.3 | 43.925 | 535 | 257 | 16 | 18 | 527 | 1048 | 1564 | 9.87e-119 | 383 |
Msa1144120 | AT4G33200.1 | 42.885 | 506 | 240 | 12 | 41 | 520 | 1019 | 1501 | 2.84e-109 | 356 |
Msa1144120 | AT4G33200.4 | 42.801 | 507 | 240 | 12 | 41 | 520 | 1019 | 1502 | 3.49e-109 | 356 |
Msa1144120 | AT4G33200.2 | 42.032 | 502 | 220 | 11 | 41 | 520 | 1019 | 1471 | 3.30e-106 | 348 |
Msa1144120 | AT1G04160.2 | 44.601 | 426 | 201 | 11 | 18 | 431 | 989 | 1391 | 6.79e-100 | 329 |
Msa1144120 | AT4G33200.3 | 40.719 | 501 | 239 | 14 | 41 | 520 | 1019 | 1482 | 6.16e-97 | 322 |
Msa1144120 | AT2G20290.2 | 39.147 | 539 | 269 | 18 | 14 | 527 | 977 | 1481 | 2.68e-95 | 317 |
Msa1144120 | AT2G20290.1 | 39.147 | 539 | 269 | 18 | 14 | 527 | 988 | 1492 | 4.05e-95 | 317 |
Msa1144120 | AT2G20290.3 | 38.951 | 534 | 262 | 17 | 14 | 527 | 977 | 1466 | 1.95e-94 | 315 |
Msa1144120 | AT2G20290.4 | 38.993 | 536 | 268 | 17 | 14 | 527 | 977 | 1475 | 5.22e-93 | 310 |
Msa1144120 | AT1G04600.1 | 35.445 | 584 | 279 | 16 | 18 | 527 | 1169 | 1728 | 2.64e-88 | 298 |
Msa1144120 | AT5G20470.1 | 57.803 | 173 | 49 | 5 | 383 | 532 | 381 | 552 | 1.54e-52 | 187 |
Msa1144120 | AT5G20470.1 | 35.965 | 228 | 86 | 5 | 2 | 220 | 190 | 366 | 2.99e-26 | 112 |
Msa1144120 | AT2G33240.5 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1041 | 1241 | 2.58e-43 | 166 |
Msa1144120 | AT2G33240.5 | 35.811 | 296 | 146 | 8 | 38 | 313 | 675 | 946 | 1.48e-40 | 157 |
Msa1144120 | AT2G33240.2 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1544 | 1744 | 5.38e-43 | 165 |
Msa1144120 | AT2G33240.2 | 38.014 | 292 | 139 | 9 | 38 | 313 | 1184 | 1449 | 1.68e-42 | 163 |
Msa1144120 | AT2G33240.8 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1547 | 1747 | 6.08e-43 | 165 |
Msa1144120 | AT2G33240.8 | 35.647 | 317 | 159 | 9 | 17 | 313 | 1161 | 1452 | 2.78e-42 | 162 |
Msa1144120 | AT2G33240.7 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1547 | 1747 | 6.08e-43 | 165 |
Msa1144120 | AT2G33240.7 | 35.647 | 317 | 159 | 9 | 17 | 313 | 1161 | 1452 | 2.78e-42 | 162 |
Msa1144120 | AT2G33240.1 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1568 | 1768 | 6.39e-43 | 164 |
Msa1144120 | AT2G33240.1 | 35.811 | 296 | 146 | 8 | 38 | 313 | 1202 | 1473 | 1.23e-40 | 158 |
Msa1144120 | AT2G33240.3 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1555 | 1755 | 6.93e-43 | 164 |
Msa1144120 | AT2G33240.3 | 38.488 | 291 | 132 | 10 | 38 | 313 | 1202 | 1460 | 5.43e-42 | 162 |
Msa1144120 | AT2G33240.6 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1567 | 1767 | 6.94e-43 | 164 |
Msa1144120 | AT2G33240.6 | 38.014 | 292 | 139 | 9 | 38 | 313 | 1207 | 1472 | 1.79e-42 | 163 |
Msa1144120 | AT2G33240.4 | 43.627 | 204 | 100 | 5 | 336 | 527 | 1562 | 1762 | 7.27e-43 | 164 |
Msa1144120 | AT2G33240.4 | 38.014 | 292 | 139 | 9 | 38 | 313 | 1202 | 1467 | 1.89e-42 | 163 |
Msa1144120 | AT5G20450.10 | 32.418 | 364 | 150 | 9 | 9 | 356 | 47 | 330 | 5.39e-36 | 138 |
Msa1144120 | AT5G20450.11 | 32.410 | 361 | 148 | 9 | 9 | 353 | 47 | 327 | 9.66e-36 | 136 |
Msa1144120 | AT5G20450.12 | 32.410 | 361 | 148 | 9 | 9 | 353 | 47 | 327 | 9.66e-36 | 136 |
Msa1144120 | AT5G20450.2 | 32.410 | 361 | 148 | 9 | 9 | 353 | 47 | 327 | 9.66e-36 | 136 |
Msa1144120 | AT5G20450.1 | 32.222 | 360 | 150 | 9 | 9 | 353 | 54 | 334 | 1.02e-35 | 136 |
Msa1144120 | AT5G20450.6 | 32.410 | 361 | 148 | 9 | 9 | 353 | 69 | 349 | 1.25e-35 | 137 |
Msa1144120 | AT5G20450.5 | 32.222 | 360 | 150 | 9 | 9 | 353 | 68 | 348 | 1.54e-35 | 136 |
Msa1144120 | AT5G20450.7 | 37.555 | 229 | 87 | 5 | 140 | 353 | 96 | 283 | 3.19e-33 | 128 |
Msa1144120 | AT5G20450.8 | 37.555 | 229 | 87 | 5 | 140 | 353 | 96 | 283 | 3.19e-33 | 128 |
Msa1144120 | AT5G20450.3 | 37.555 | 229 | 87 | 5 | 140 | 353 | 118 | 305 | 3.63e-33 | 129 |
Msa1144120 | AT5G20450.9 | 37.555 | 229 | 87 | 5 | 140 | 353 | 117 | 304 | 3.73e-33 | 129 |
Find 147 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAACTCAGGCTTCTATTAT+TGG | 0.124659 | 7_4:-20096062 | Msa1144120:three_prime_UTR |
TGTGGCTTTCCTTCAGATTC+AGG | 0.181103 | 7_4:+20099078 | None:intergenic |
CATCGATGAATGAGAATATT+TGG | 0.181744 | 7_4:+20097330 | None:intergenic |
AGTCTCAGCCTGAGCTCTTT+TGG | 0.220187 | 7_4:+20100563 | None:intergenic |
TCCCGTCAAGGTTTAGTAAA+AGG | 0.225736 | 7_4:-20097561 | Msa1144120:CDS |
GTTCCTTAGTTATTTCATTC+AGG | 0.229331 | 7_4:+20096865 | None:intergenic |
TTAACAGGCACCTCCTTTCT+TGG | 0.247759 | 7_4:-20097369 | Msa1144120:intron |
CGAATGCATATCACAAGATT+TGG | 0.249017 | 7_4:-20098911 | Msa1144120:CDS |
TTCTACTTCTTGCATGGATT+TGG | 0.250394 | 7_4:+20096288 | None:intergenic |
GATACAGGAATCACTGTTAT+TGG | 0.258978 | 7_4:-20100607 | Msa1144120:intron |
GAGATGTCATCCACCGAAAA+TGG | 0.272696 | 7_4:+20096310 | None:intergenic |
TCTATTATTGGTGAGTTGCC+TGG | 0.272830 | 7_4:-20096050 | Msa1144120:three_prime_UTR |
CTAACCTCTGAACCAATTCT+TGG | 0.278716 | 7_4:+20100478 | None:intergenic |
TTTAAACAGCTCCTTACTTC+TGG | 0.283154 | 7_4:+20100536 | None:intergenic |
GCCTTCCATGAGAAATTATA+TGG | 0.286178 | 7_4:-20098256 | Msa1144120:CDS |
CTTGGAGTTGATCCGCTTTA+CGG | 0.287005 | 7_4:+20100496 | None:intergenic |
GCCTCTATCGCTCCATCTTA+CGG | 0.314288 | 7_4:-20096168 | Msa1144120:three_prime_UTR |
ATTTCATTCAGGGACTTCTT+AGG | 0.315522 | 7_4:+20096876 | None:intergenic |
GCTGGATTGCCATTTATAAA+TGG | 0.323395 | 7_4:-20098358 | Msa1144120:CDS |
AGACCTCGACCATTTATAAA+TGG | 0.332201 | 7_4:+20098349 | None:intergenic |
TAGGCAAGCAGTTGGATTCC+TGG | 0.338486 | 7_4:-20096997 | Msa1144120:intron |
AGCAGCTCCACTTGCTTTGA+GGG | 0.361021 | 7_4:+20098567 | None:intergenic |
GTATACACAGTCCAAGTAAT+GGG | 0.361512 | 7_4:+20098200 | None:intergenic |
ACCTCGAGTCATCGTCTAAT+AGG | 0.362443 | 7_4:+20096427 | None:intergenic |
ACAGCATCATCTTCTCTGTT+TGG | 0.367427 | 7_4:-20098520 | Msa1144120:CDS |
CACTTGCTTTGAGGGTGCGT+TGG | 0.373294 | 7_4:+20098575 | None:intergenic |
ATACTGATGTATTAGCCTAT+TGG | 0.374702 | 7_4:-20098630 | Msa1144120:CDS |
TCGATGTTCAATTATTCAAC+AGG | 0.381005 | 7_4:-20097313 | Msa1144120:intron |
CTATTATTGGTGAGTTGCCT+GGG | 0.382986 | 7_4:-20096049 | Msa1144120:three_prime_UTR |
CCTCTATCGCTCCATCTTAC+GGG | 0.392489 | 7_4:-20096167 | Msa1144120:three_prime_UTR |
GAATGCATATCACAAGATTT+GGG | 0.396771 | 7_4:-20098910 | Msa1144120:CDS |
GTGATACAGCCAATGCTTGC+TGG | 0.399896 | 7_4:+20099416 | None:intergenic |
CGCCATTTGTCACATGCATT+GGG | 0.401231 | 7_4:+20095966 | None:intergenic |
CAAATGACCTCCAGTGTAGA+AGG | 0.401368 | 7_4:+20098837 | None:intergenic |
TTCCTTAGTTATTTCATTCA+GGG | 0.402693 | 7_4:+20096866 | None:intergenic |
AAGTAAGGAGCTGTTTAAAA+AGG | 0.405762 | 7_4:-20100532 | Msa1144120:CDS |
AGCGGATCAACTCCAAGAAT+TGG | 0.407452 | 7_4:-20100490 | Msa1144120:CDS |
AGTGTTGTTCATTCAGCAAC+GGG | 0.408930 | 7_4:-20097189 | Msa1144120:CDS |
AGTGTAGAAGGCATTTATAT+AGG | 0.409492 | 7_4:+20098849 | None:intergenic |
GGGAGGAACTGAAACATATT+AGG | 0.409733 | 7_4:-20097016 | Msa1144120:CDS |
GTGTAGAAGGCATTTATATA+GGG | 0.412070 | 7_4:+20098850 | None:intergenic |
ATCGATGAATGAGAATATTT+GGG | 0.414091 | 7_4:+20097331 | None:intergenic |
TGCATCTTTGTGCAGTCACC+CGG | 0.417684 | 7_4:+20096139 | None:intergenic |
TAGCAGCTCCACTTGCTTTG+AGG | 0.420039 | 7_4:+20098566 | None:intergenic |
TATATAAATGCCTTCTACAC+TGG | 0.423790 | 7_4:-20098847 | Msa1144120:CDS |
CCCGTCAAGGTTTAGTAAAA+GGG | 0.435935 | 7_4:-20097560 | Msa1144120:CDS |
ACGTACAGAACGCGATTGAA+TGG | 0.437036 | 7_4:+20100721 | None:intergenic |
ATACGTGAGAACTCAGGGTT+TGG | 0.442787 | 7_4:-20096238 | Msa1144120:CDS |
CTAATACATCAGTATTATCC+TGG | 0.446585 | 7_4:+20098638 | None:intergenic |
ATGTGACAAATGGCGATCAT+AGG | 0.454288 | 7_4:-20095958 | Msa1144120:three_prime_UTR |
CTCCATCTTACGGGTATCCC+CGG | 0.462159 | 7_4:-20096158 | Msa1144120:three_prime_UTR |
TGCATTCGATCAACAAGTCC+TGG | 0.468352 | 7_4:+20098926 | None:intergenic |
TCGCCATTTGTCACATGCAT+TGG | 0.469587 | 7_4:+20095965 | None:intergenic |
AAAGAGATATCCCCATTACT+TGG | 0.472318 | 7_4:-20098211 | Msa1144120:CDS |
CTCACGTTGATGAAACTTGA+AGG | 0.475843 | 7_4:+20096011 | None:intergenic |
AAACCTTGACGGGAGGTCCT+TGG | 0.476523 | 7_4:+20097570 | None:intergenic |
ACTGTATACAACAATTATAC+AGG | 0.476983 | 7_4:-20096735 | Msa1144120:CDS |
TCCTGAATAATGACTGATCT+AGG | 0.480942 | 7_4:+20099367 | None:intergenic |
TGAGACTGAAGCCAGAAGTA+AGG | 0.482498 | 7_4:-20100547 | Msa1144120:CDS |
AACACCTTGCGGACCAAGAA+AGG | 0.482732 | 7_4:+20097356 | None:intergenic |
AGCAACTTCTACTTCTTGCA+TGG | 0.488919 | 7_4:+20096282 | None:intergenic |
TACGTGAGAACTCAGGGTTT+GGG | 0.490253 | 7_4:-20096237 | Msa1144120:CDS |
TCCATATAATTTCTCATGGA+AGG | 0.490301 | 7_4:+20098255 | None:intergenic |
GTCCCTGAATGAAATAACTA+AGG | 0.493940 | 7_4:-20096868 | Msa1144120:CDS |
ATTACTTGGACTGTGTATAC+AGG | 0.498198 | 7_4:-20098197 | Msa1144120:intron |
GATCATAGGTACAGCCATAC+AGG | 0.498579 | 7_4:-20095944 | Msa1144120:three_prime_UTR |
GAGAAGATGATGCTGTTCTT+CGG | 0.498882 | 7_4:+20098527 | None:intergenic |
TCATTCCATATAATTTCTCA+TGG | 0.502647 | 7_4:+20098251 | None:intergenic |
AGGGGATCTCCTCAGAGTGC+TGG | 0.505301 | 7_4:-20098376 | Msa1144120:CDS |
TTGTCACATGCATTGGGACA+TGG | 0.508323 | 7_4:+20095972 | None:intergenic |
CATTGATAGTAGGATTGGAC+AGG | 0.509438 | 7_4:-20100757 | None:intergenic |
ACCTCCTTTCTTGGTCCGCA+AGG | 0.509655 | 7_4:-20097360 | Msa1144120:CDS |
GTTGTTGTCACACCTGCTCA+AGG | 0.512066 | 7_4:-20095905 | Msa1144120:three_prime_UTR |
CTCGGCAACCATAGCTCTCA+TGG | 0.512738 | 7_4:+20096479 | None:intergenic |
AAATGATCACACGTCTGTAC+AGG | 0.513757 | 7_4:+20095698 | None:intergenic |
AGATGTATTAGACAACCAAT+AGG | 0.513924 | 7_4:+20098615 | None:intergenic |
AGATTCAGGCTCACGTACAT+TGG | 0.514002 | 7_4:+20099092 | None:intergenic |
TGGGTTCTTACTAGCTCGCT+CGG | 0.515204 | 7_4:-20096218 | Msa1144120:CDS |
TGACTGGACAACAACCTGTA+TGG | 0.517339 | 7_4:+20095930 | None:intergenic |
ACCCGGGGATACCCGTAAGA+TGG | 0.519268 | 7_4:+20096156 | None:intergenic |
AGTTCTTCGCCAGCAAGCAT+TGG | 0.522449 | 7_4:-20099425 | Msa1144120:CDS |
GGGTGACTGCACAAAGATGC+AGG | 0.523660 | 7_4:-20096137 | Msa1144120:three_prime_UTR |
CCCGTAAGATGGAGCGATAG+AGG | 0.527493 | 7_4:+20096167 | None:intergenic |
AGAAGAAGCCAAAAGAGCTC+AGG | 0.531195 | 7_4:-20100571 | Msa1144120:CDS |
GTCCCAATGCATGTGACAAA+TGG | 0.531863 | 7_4:-20095968 | Msa1144120:three_prime_UTR |
ACAGTACACTGGCTCGGCGT+GGG | 0.535985 | 7_4:-20097036 | Msa1144120:intron |
GGAGTATGTGAAGACAGGTT+TGG | 0.537057 | 7_4:-20097167 | Msa1144120:CDS |
AACGGGGAGTATGTGAAGAC+AGG | 0.537150 | 7_4:-20097172 | Msa1144120:CDS |
CGTTGATACGTGAGAACTCA+GGG | 0.540697 | 7_4:-20096243 | Msa1144120:CDS |
AAACATATTAGGCAAGCAGT+TGG | 0.541928 | 7_4:-20097005 | Msa1144120:CDS |
ACAAGTAGAAGCAAAATATC+CGG | 0.544619 | 7_4:-20098305 | Msa1144120:CDS |
GGTGTGACAACAACAATGAC+TGG | 0.545775 | 7_4:+20095914 | None:intergenic |
GCATCTTTGTGCAGTCACCC+GGG | 0.546327 | 7_4:+20096140 | None:intergenic |
GGTTTGTGAGTCTTATACGT+GGG | 0.548248 | 7_4:-20095859 | Msa1144120:three_prime_UTR |
CTCCATACAATGCAGATTGG+AGG | 0.548589 | 7_4:-20099479 | Msa1144120:intron |
ATGCAGAGGACACCAGAAAA+CGG | 0.548807 | 7_4:-20099270 | Msa1144120:intron |
AGCAAGCTTTAATAGCTCAC+TGG | 0.550058 | 7_4:-20097512 | Msa1144120:CDS |
TACAGTACACTGGCTCGGCG+TGG | 0.554550 | 7_4:-20097037 | Msa1144120:intron |
GACAGCATTAGTAGAGTCCT+CGG | 0.555902 | 7_4:+20096461 | None:intergenic |
TTCAAGTTTCATCAACGTGA+GGG | 0.558478 | 7_4:-20096009 | Msa1144120:three_prime_UTR |
TGTATACACAGTCCAAGTAA+TGG | 0.560179 | 7_4:+20098199 | None:intergenic |
AATATGCGCAATAAAATACA+TGG | 0.560228 | 7_4:+20095822 | None:intergenic |
TTGTTTACAGTACACTGGCT+CGG | 0.560577 | 7_4:-20097042 | Msa1144120:intron |
TTGCCATTTATAAATGGTCG+AGG | 0.565895 | 7_4:-20098352 | Msa1144120:CDS |
CAACGCACCCTCAAAGCAAG+TGG | 0.571235 | 7_4:-20098574 | Msa1144120:CDS |
TTCTCACGTATCAACGGAGG+AGG | 0.571431 | 7_4:+20096250 | None:intergenic |
ATCACTGTTATTGGAAAGAG+AGG | 0.573241 | 7_4:-20100598 | Msa1144120:CDS |
TCCATCTTACGGGTATCCCC+GGG | 0.575072 | 7_4:-20096157 | Msa1144120:three_prime_UTR |
ATCTATTGTTTACAGTACAC+TGG | 0.577132 | 7_4:-20097047 | Msa1144120:intron |
GAAAACGGAAATGCTCTGAA+TGG | 0.583678 | 7_4:-20099255 | Msa1144120:CDS |
CGAGGTCTTAGTAGACTCGA+TGG | 0.584936 | 7_4:-20098334 | Msa1144120:CDS |
GAGTGTTGTTCATTCAGCAA+CGG | 0.589858 | 7_4:-20097190 | Msa1144120:CDS |
AGAAGTAGAAGTTGCTGACG+TGG | 0.593376 | 7_4:-20096275 | Msa1144120:CDS |
TAAAACAACTGCAGGCTCCA+AGG | 0.593785 | 7_4:-20097587 | Msa1144120:intron |
TGTTGCTTAAACAAAAGTGC+CGG | 0.593946 | 7_4:+20098286 | None:intergenic |
GTACGTGAGCCTGAATCTGA+AGG | 0.594277 | 7_4:-20099087 | Msa1144120:CDS |
TAATACATCAGTATTATCCT+GGG | 0.599053 | 7_4:+20098639 | None:intergenic |
GTACACTGGCTCGGCGTGGG+AGG | 0.599670 | 7_4:-20097033 | Msa1144120:CDS |
CGAGTCATCGTCTAATAGGA+AGG | 0.599854 | 7_4:+20096431 | None:intergenic |
AACTCCAAGAATTGGTTCAG+AGG | 0.603416 | 7_4:-20100482 | Msa1144120:intron |
CCTGAGTTCTCACGTATCAA+CGG | 0.609654 | 7_4:+20096244 | None:intergenic |
TACAACAACCATGAGAGCTA+TGG | 0.611937 | 7_4:-20096487 | Msa1144120:CDS |
ATAAAATTATATGCACAACT+TGG | 0.612107 | 7_4:+20096112 | None:intergenic |
GCTCCAAGGACCTCCCGTCA+AGG | 0.620806 | 7_4:-20097573 | Msa1144120:CDS |
CTTCAAGTTTCATCAACGTG+AGG | 0.622594 | 7_4:-20096010 | Msa1144120:three_prime_UTR |
TCAAGTTTCATCAACGTGAG+GGG | 0.623126 | 7_4:-20096008 | Msa1144120:three_prime_UTR |
CATCTTTGTGCAGTCACCCG+GGG | 0.623637 | 7_4:+20096141 | None:intergenic |
CGAGGATTCTGACCGTAAAG+CGG | 0.625541 | 7_4:-20100508 | Msa1144120:CDS |
ATAAATGCCTTCTACACTGG+AGG | 0.627596 | 7_4:-20098844 | Msa1144120:CDS |
GATGCTGTTCTTCGGCGTTG+TGG | 0.631917 | 7_4:+20098535 | None:intergenic |
TCCTATTAGACGATGACTCG+AGG | 0.632962 | 7_4:-20096428 | Msa1144120:intron |
CATGAGAGCTATGGTTGCCG+AGG | 0.633584 | 7_4:-20096478 | Msa1144120:CDS |
TCACGTTGATGAAACTTGAA+GGG | 0.634659 | 7_4:+20096012 | None:intergenic |
ATATTTGGGTGAACACCTTG+CGG | 0.640164 | 7_4:+20097345 | None:intergenic |
ACCTTGCGGACCAAGAAAGG+AGG | 0.642518 | 7_4:+20097359 | None:intergenic |
GTTTGGCTGAATTAGAACAA+TGG | 0.650748 | 7_4:-20097150 | Msa1144120:CDS |
GTGCATCGAGGCAACAGAGG+AGG | 0.651278 | 7_4:-20097128 | Msa1144120:intron |
AGGTTTGTGAGTCTTATACG+TGG | 0.657535 | 7_4:-20095860 | Msa1144120:three_prime_UTR |
TTGTCATTGAGAGATTTCTG+TGG | 0.660446 | 7_4:+20099060 | None:intergenic |
TATACACAGTCCAAGTAATG+GGG | 0.661207 | 7_4:+20098201 | None:intergenic |
AGGGCGCTCACATGCTAACG+CGG | 0.664578 | 7_4:-20097541 | Msa1144120:CDS |
ATGGTGCATCGAGGCAACAG+AGG | 0.665195 | 7_4:-20097131 | Msa1144120:CDS |
GGGTAATAATGAATTAACCC+AGG | 0.667670 | 7_4:+20096032 | None:intergenic |
AATGGCAATCCAGCACTCTG+AGG | 0.696402 | 7_4:+20098367 | None:intergenic |
GAGTTCTCACGTATCAACGG+AGG | 0.724038 | 7_4:+20096247 | None:intergenic |
GTGTTGTTCATTCAGCAACG+GGG | 0.731245 | 7_4:-20097188 | Msa1144120:CDS |
ATTAGAACAATGGTGCATCG+AGG | 0.736741 | 7_4:-20097140 | Msa1144120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAACAAATTAAACAAAA+TGG | + | chr7_4:20097246-20097265 | None:intergenic | 10.0% |
!!! | TGTTTAATTTGAATAAATAT+AGG | + | chr7_4:20098446-20098465 | None:intergenic | 10.0% |
!!! | TAAATTAACAAAGGTATATA+TGG | + | chr7_4:20096876-20096895 | None:intergenic | 15.0% |
!! | AATTGCATTTAAATTAACAA+AGG | + | chr7_4:20096885-20096904 | None:intergenic | 15.0% |
!!! | ACTATTTAAATTTCACTTTT+TGG | - | chr7_4:20097440-20097459 | Msa1144120:intron | 15.0% |
!!! | TATTACTAAGTATAACATTT+TGG | - | chr7_4:20099622-20099641 | Msa1144120:intron | 15.0% |
!!! | TTGTTTTTTCTTTTCATTTT+AGG | - | chr7_4:20100519-20100538 | Msa1144120:CDS | 15.0% |
!! | TCTTTCATTTAGAAATTTGA+TGG | + | chr7_4:20096040-20096059 | None:intergenic | 20.0% |
!! | TATCTAATCTAATACTTTAG+TGG | + | chr7_4:20096068-20096087 | None:intergenic | 20.0% |
!! | AAATAAAACTTGATGCATTT+AGG | + | chr7_4:20096431-20096450 | None:intergenic | 20.0% |
!!! | AAGTGTAACAATTTTAAAAG+TGG | + | chr7_4:20096691-20096710 | None:intergenic | 20.0% |
!! | AAGGTATATATGGTTATTAA+CGG | + | chr7_4:20096866-20096885 | None:intergenic | 20.0% |
!!! | TATATATCAACAACTCATTT+TGG | - | chr7_4:20097213-20097232 | Msa1144120:intron | 20.0% |
!! | TAAATTGTATCACTTTATGT+AGG | - | chr7_4:20097944-20097963 | Msa1144120:intron | 20.0% |
!! | AAATTGTATCACTTTATGTA+GGG | - | chr7_4:20097945-20097964 | Msa1144120:intron | 20.0% |
!!! | AAATACCTTACCTTTTTTTT+TGG | - | chr7_4:20098231-20098250 | Msa1144120:CDS | 20.0% |
!!! | AATACCTTACCTTTTTTTTT+GGG | - | chr7_4:20098232-20098251 | Msa1144120:CDS | 20.0% |
!! | AACAATCTGAATTAATTGTT+TGG | + | chr7_4:20099303-20099322 | None:intergenic | 20.0% |
!!! | ATTGTTTACTTTTCCATTTT+AGG | - | chr7_4:20099317-20099336 | Msa1144120:intron | 20.0% |
!! | TACAAATTCAAATTCGATAT+TGG | - | chr7_4:20099443-20099462 | Msa1144120:CDS | 20.0% |
!!! | TCTATTTTGTAATGTTTCTA+CGG | - | chr7_4:20099788-20099807 | Msa1144120:intron | 20.0% |
!! | ATAAAATTATATGCACAACT+TGG | + | chr7_4:20100290-20100309 | None:intergenic | 20.0% |
! | TGTATCAGGTATTAAACAAT+GGG | + | chr7_4:20095778-20095797 | None:intergenic | 25.0% |
! | TGATTCATTACATGGTATAA+TGG | - | chr7_4:20096136-20096155 | Msa1144120:three_prime_UTR | 25.0% |
!! | TCACTTATATACACATTTTC+AGG | + | chr7_4:20096342-20096361 | None:intergenic | 25.0% |
! | TGAAAATGTGTATATAAGTG+AGG | - | chr7_4:20096341-20096360 | Msa1144120:intron | 25.0% |
! | GAAAATGTGTATATAAGTGA+GGG | - | chr7_4:20096342-20096361 | Msa1144120:intron | 25.0% |
! | ATGTATATATCCTGTTAGAT+GGG | + | chr7_4:20096397-20096416 | None:intergenic | 25.0% |
! | TATGTATATATCCTGTTAGA+TGG | + | chr7_4:20096398-20096417 | None:intergenic | 25.0% |
!! | TGCTAAAATGACACTTATTT+TGG | + | chr7_4:20096535-20096554 | None:intergenic | 25.0% |
! | TGGAACAAAGTAATAAATGT+TGG | + | chr7_4:20096569-20096588 | None:intergenic | 25.0% |
!! | TTTAGTCCACACATATTTTT+GGG | - | chr7_4:20096744-20096763 | Msa1144120:CDS | 25.0% |
! | AAATGGTTGAAAGGAAAATA+TGG | + | chr7_4:20096782-20096801 | None:intergenic | 25.0% |
! | AGGTATATATGGTTATTAAC+GGG | + | chr7_4:20096865-20096884 | None:intergenic | 25.0% |
! | AAAACTATGGTATATGAAGA+GGG | - | chr7_4:20097080-20097099 | Msa1144120:intron | 25.0% |
!!! | TAAATTTCACTTTTTGGTTC+AGG | - | chr7_4:20097446-20097465 | Msa1144120:intron | 25.0% |
! | AAGCTATTGTTTGAATGATA+CGG | + | chr7_4:20097613-20097632 | None:intergenic | 25.0% |
!!! | CAGTGTTGGTAAAATATTTT+GGG | + | chr7_4:20097723-20097742 | None:intergenic | 25.0% |
!!! | ACAGTGTTGGTAAAATATTT+TGG | + | chr7_4:20097724-20097743 | None:intergenic | 25.0% |
! | TAATACATCAGTATTATCCT+GGG | + | chr7_4:20097763-20097782 | None:intergenic | 25.0% |
! | GTGATACAATTTATTCAGAA+AGG | + | chr7_4:20097937-20097956 | None:intergenic | 25.0% |
! | TCATTCCATATAATTTCTCA+TGG | + | chr7_4:20098151-20098170 | None:intergenic | 25.0% |
!!! | ATACCTTACCTTTTTTTTTG+GGG | - | chr7_4:20098233-20098252 | Msa1144120:CDS | 25.0% |
! | TTTCATTTCCCCAAAAAAAA+AGG | + | chr7_4:20098244-20098263 | None:intergenic | 25.0% |
! | AATGGGAATTTCTCAAAATT+TGG | + | chr7_4:20098269-20098288 | None:intergenic | 25.0% |
!!! | AAATTTTGAGAAATTCCCAT+TGG | - | chr7_4:20098268-20098287 | Msa1144120:CDS | 25.0% |
! | TTACTTGAATGTCATATATG+AGG | - | chr7_4:20098329-20098348 | Msa1144120:CDS | 25.0% |
! | TACTTGAATGTCATATATGA+GGG | - | chr7_4:20098330-20098349 | Msa1144120:CDS | 25.0% |
! | TACAAGTATCTTAGAATTTG+TGG | + | chr7_4:20098411-20098430 | None:intergenic | 25.0% |
!!! | AAGGGAAAAGTTTATTTTTC+TGG | + | chr7_4:20098545-20098564 | None:intergenic | 25.0% |
! | TCAGAAAACAATTCATAGAA+AGG | - | chr7_4:20098578-20098597 | Msa1144120:CDS | 25.0% |
!! | TTTTATGATAAAACAACTGC+AGG | - | chr7_4:20098804-20098823 | Msa1144120:intron | 25.0% |
! | TTAAGATCAAACTCAGATAA+CGG | + | chr7_4:20098995-20099014 | None:intergenic | 25.0% |
! | ATCGATGAATGAGAATATTT+GGG | + | chr7_4:20099071-20099090 | None:intergenic | 25.0% |
! | TGTACTGTAAACAATAGATT+GGG | + | chr7_4:20099351-20099370 | None:intergenic | 25.0% |
!! | TTCCTTAGTTATTTCATTCA+GGG | + | chr7_4:20099536-20099555 | None:intergenic | 25.0% |
! | ATAGTTAATAGAAAGAGAGA+AGG | + | chr7_4:20099575-20099594 | None:intergenic | 25.0% |
! | ACTGTATACAACAATTATAC+AGG | - | chr7_4:20099664-20099683 | Msa1144120:intron | 25.0% |
! | TAAAGTAGCTGATAATTCTA+TGG | - | chr7_4:20099878-20099897 | Msa1144120:intron | 25.0% |
!! | TAGCATTTTTCTTTAACCTT+TGG | - | chr7_4:20100050-20100069 | Msa1144120:intron | 25.0% |
!! | TTTTCTTTAACCTTTGGATT+TGG | - | chr7_4:20100056-20100075 | Msa1144120:intron | 25.0% |
! | AAAAATATACTATACACGTG+AGG | + | chr7_4:20100316-20100335 | None:intergenic | 25.0% |
!!! | TAGTATATTTTTGCTAACTC+AGG | - | chr7_4:20100324-20100343 | Msa1144120:intron | 25.0% |
! | AATATGCGCAATAAAATACA+TGG | + | chr7_4:20100580-20100599 | None:intergenic | 25.0% |
! | CTGTTCAAAAAAAACAACTT+AGG | + | chr7_4:20100653-20100672 | None:intergenic | 25.0% |
CTGTATCAGGTATTAAACAA+TGG | + | chr7_4:20095779-20095798 | None:intergenic | 30.0% | |
CATTGTTTAATACCTGATAC+AGG | - | chr7_4:20095777-20095796 | Msa1144120:three_prime_UTR | 30.0% | |
AAGTAAGGAGCTGTTTAAAA+AGG | - | chr7_4:20095867-20095886 | Msa1144120:three_prime_UTR | 30.0% | |
TTTAAGCTATTAGGTGAAAG+CGG | + | chr7_4:20096103-20096122 | None:intergenic | 30.0% | |
TCTCAGAAGTTTAAGCTATT+AGG | + | chr7_4:20096112-20096131 | None:intergenic | 30.0% | |
GAGATGTTTGATTCATTACA+TGG | - | chr7_4:20096128-20096147 | Msa1144120:three_prime_UTR | 30.0% | |
!!! | ACCAAGTTCTTTTGAGATTA+AGG | - | chr7_4:20096161-20096180 | Msa1144120:three_prime_UTR | 30.0% |
TCCTTAATCTCAAAAGAACT+TGG | + | chr7_4:20096165-20096184 | None:intergenic | 30.0% | |
!!! | GACACTTATTTTGGAATAGA+GGG | + | chr7_4:20096526-20096545 | None:intergenic | 30.0% |
!!! | TGACACTTATTTTGGAATAG+AGG | + | chr7_4:20096527-20096546 | None:intergenic | 30.0% |
CTATAAATTTGGGGAAGAAT+TGG | + | chr7_4:20096589-20096608 | None:intergenic | 30.0% | |
CACACAACACTATAAATTTG+GGG | + | chr7_4:20096598-20096617 | None:intergenic | 30.0% | |
GCACACAACACTATAAATTT+GGG | + | chr7_4:20096599-20096618 | None:intergenic | 30.0% | |
TGCACACAACACTATAAATT+TGG | + | chr7_4:20096600-20096619 | None:intergenic | 30.0% | |
! | CTTTAGTCCACACATATTTT+TGG | - | chr7_4:20096743-20096762 | Msa1144120:CDS | 30.0% |
GGTATATATGGTTATTAACG+GGG | + | chr7_4:20096864-20096883 | None:intergenic | 30.0% | |
! | TTGATTTTCTGACTCTGAAT+TGG | + | chr7_4:20096955-20096974 | None:intergenic | 30.0% |
CAAAACTATGGTATATGAAG+AGG | - | chr7_4:20097079-20097098 | Msa1144120:intron | 30.0% | |
TCTTACCTTCCATATATCTT+AGG | - | chr7_4:20097266-20097285 | Msa1144120:intron | 30.0% | |
CATATCCTAAGATATATGGA+AGG | + | chr7_4:20097274-20097293 | None:intergenic | 30.0% | |
GAGTCATATCCTAAGATATA+TGG | + | chr7_4:20097278-20097297 | None:intergenic | 30.0% | |
GAATGCATATCACAAGATTT+GGG | - | chr7_4:20097489-20097508 | Msa1144120:CDS | 30.0% | |
!! | GTGTAGAAGGCATTTATATA+GGG | + | chr7_4:20097552-20097571 | None:intergenic | 30.0% |
!! | AGTGTAGAAGGCATTTATAT+AGG | + | chr7_4:20097553-20097572 | None:intergenic | 30.0% |
TATATAAATGCCTTCTACAC+TGG | - | chr7_4:20097552-20097571 | Msa1144120:CDS | 30.0% | |
! | TTGAGGTAACATAACACTTT+TGG | - | chr7_4:20097639-20097658 | Msa1144120:intron | 30.0% |
CTAATACATCAGTATTATCC+TGG | + | chr7_4:20097764-20097783 | None:intergenic | 30.0% | |
! | ATACTGATGTATTAGCCTAT+TGG | - | chr7_4:20097769-20097788 | Msa1144120:intron | 30.0% |
AGATGTATTAGACAACCAAT+AGG | + | chr7_4:20097787-20097806 | None:intergenic | 30.0% | |
! | TGATTGCCTTTTGTGATTTT+AGG | - | chr7_4:20097995-20098014 | Msa1144120:intron | 30.0% |
! | GATTGCCTTTTGTGATTTTA+GGG | - | chr7_4:20097996-20098015 | Msa1144120:intron | 30.0% |
! | ATTGCCTTTTGTGATTTTAG+GGG | - | chr7_4:20097997-20098016 | Msa1144120:intron | 30.0% |
ACAAGTAGAAGCAAAATATC+CGG | - | chr7_4:20098094-20098113 | Msa1144120:intron | 30.0% | |
TCCATATAATTTCTCATGGA+AGG | + | chr7_4:20098147-20098166 | None:intergenic | 30.0% | |
TTTCCCCAAAAAAAAAGGTA+AGG | + | chr7_4:20098239-20098258 | None:intergenic | 30.0% | |
AAGTAAAATCCAAGTACGAT+TGG | + | chr7_4:20098315-20098334 | None:intergenic | 30.0% | |
GTATCTTAGAATTTGTGGTT+GGG | + | chr7_4:20098406-20098425 | None:intergenic | 30.0% | |
AGTATCTTAGAATTTGTGGT+TGG | + | chr7_4:20098407-20098426 | None:intergenic | 30.0% | |
TCTGATTTAGCAAGCAAAAA+GGG | + | chr7_4:20098563-20098582 | None:intergenic | 30.0% | |
TTCTGATTTAGCAAGCAAAA+AGG | + | chr7_4:20098564-20098583 | None:intergenic | 30.0% | |
AAGTACCTACTAGTGATTTA+GGG | + | chr7_4:20098680-20098699 | None:intergenic | 30.0% | |
! | AATTAAGCTCGTTGATTACT+GGG | + | chr7_4:20098756-20098775 | None:intergenic | 30.0% |
TGATCTTAACCTGTTTGAAA+TGG | - | chr7_4:20099006-20099025 | Msa1144120:intron | 30.0% | |
CATCGATGAATGAGAATATT+TGG | + | chr7_4:20099072-20099091 | None:intergenic | 30.0% | |
TCGATGTTCAATTATTCAAC+AGG | - | chr7_4:20099086-20099105 | Msa1144120:CDS | 30.0% | |
TTGGGGTAAAAATCCTAAAA+TGG | + | chr7_4:20099333-20099352 | None:intergenic | 30.0% | |
GTACTGTAAACAATAGATTG+GGG | + | chr7_4:20099350-20099369 | None:intergenic | 30.0% | |
GTGTACTGTAAACAATAGAT+TGG | + | chr7_4:20099352-20099371 | None:intergenic | 30.0% | |
ATCTATTGTTTACAGTACAC+TGG | - | chr7_4:20099352-20099371 | Msa1144120:intron | 30.0% | |
GTATCTATTACGTAAATGAC+CGG | - | chr7_4:20099465-20099484 | Msa1144120:CDS | 30.0% | |
! | GTTCCTTAGTTATTTCATTC+AGG | + | chr7_4:20099537-20099556 | None:intergenic | 30.0% |
CAAAGATCACGAATGAATAT+TGG | + | chr7_4:20100021-20100040 | None:intergenic | 30.0% | |
TTGCGCATATTTATTTGATG+TGG | - | chr7_4:20100589-20100608 | Msa1144120:CDS | 30.0% | |
TTACCATCAATTGTTGTGTG+CGG | - | chr7_4:20095723-20095742 | Msa1144120:three_prime_UTR | 35.0% | |
ATAACAGTGATTCCTGTATC+AGG | + | chr7_4:20095792-20095811 | None:intergenic | 35.0% | |
GATACAGGAATCACTGTTAT+TGG | - | chr7_4:20095792-20095811 | Msa1144120:three_prime_UTR | 35.0% | |
ATCACTGTTATTGGAAAGAG+AGG | - | chr7_4:20095801-20095820 | Msa1144120:intron | 35.0% | |
TTTAAACAGCTCCTTACTTC+TGG | + | chr7_4:20095866-20095885 | None:intergenic | 35.0% | |
TCAGAGGTTAGTAATGTTTG+AGG | - | chr7_4:20095933-20095952 | Msa1144120:three_prime_UTR | 35.0% | |
TTTATCTGTGTCAAGCTCAA+AGG | - | chr7_4:20096207-20096226 | Msa1144120:exon | 35.0% | |
!!! | ATCTAACCGTGTTAGCTTTT+GGG | - | chr7_4:20096282-20096301 | Msa1144120:CDS | 35.0% |
ACATATCCCAAAAGCTAACA+CGG | + | chr7_4:20096291-20096310 | None:intergenic | 35.0% | |
AGGTCATATCTCATTCAATG+TGG | + | chr7_4:20096322-20096341 | None:intergenic | 35.0% | |
TGAGTGCATTGTAGATTCAA+AGG | + | chr7_4:20096480-20096499 | None:intergenic | 35.0% | |
TCATTGTCATAAATGCACAG+TGG | + | chr7_4:20096644-20096663 | None:intergenic | 35.0% | |
CAATTACATGAGTGGACAAA+TGG | + | chr7_4:20096799-20096818 | None:intergenic | 35.0% | |
AAACTTGATTGCTCATCCAA+AGG | + | chr7_4:20096826-20096845 | None:intergenic | 35.0% | |
TAACTCCATACAATGCAGAT+TGG | - | chr7_4:20096917-20096936 | Msa1144120:intron | 35.0% | |
ACCTAGATCAGTCATTATTC+AGG | - | chr7_4:20097031-20097050 | Msa1144120:CDS | 35.0% | |
TCCTGAATAATGACTGATCT+AGG | + | chr7_4:20097035-20097054 | None:intergenic | 35.0% | |
CAGGAAAGAAAACATTCATG+TGG | - | chr7_4:20097050-20097069 | Msa1144120:intron | 35.0% | |
ATGTGGTCATTGCAAAACTA+TGG | - | chr7_4:20097067-20097086 | Msa1144120:intron | 35.0% | |
! | ATTTTGTGCATGATATGCAG+AGG | - | chr7_4:20097115-20097134 | Msa1144120:intron | 35.0% |
TTGTCATTGAGAGATTTCTG+TGG | + | chr7_4:20097342-20097361 | None:intergenic | 35.0% | |
CGAATGCATATCACAAGATT+TGG | - | chr7_4:20097488-20097507 | Msa1144120:CDS | 35.0% | |
!! | ACAAGATTTGGGATTTTCTG+AGG | - | chr7_4:20097500-20097519 | Msa1144120:CDS | 35.0% |
!! | CAAGATTTGGGATTTTCTGA+GGG | - | chr7_4:20097501-20097520 | Msa1144120:CDS | 35.0% |
TTAGCCCCTAAAATCACAAA+AGG | + | chr7_4:20098004-20098023 | None:intergenic | 35.0% | |
!! | TTTTGTGATTTTAGGGGCTA+AGG | - | chr7_4:20098003-20098022 | Msa1144120:intron | 35.0% |
!! | TTTGTGATTTTAGGGGCTAA+GGG | - | chr7_4:20098004-20098023 | Msa1144120:intron | 35.0% |
! | GCTGGATTGCCATTTATAAA+TGG | - | chr7_4:20098041-20098060 | Msa1144120:intron | 35.0% |
! | TTGCCATTTATAAATGGTCG+AGG | - | chr7_4:20098047-20098066 | Msa1144120:intron | 35.0% |
AGACCTCGACCATTTATAAA+TGG | + | chr7_4:20098053-20098072 | None:intergenic | 35.0% | |
! | TGTTGCTTAAACAAAAGTGC+CGG | + | chr7_4:20098116-20098135 | None:intergenic | 35.0% |
GCCTTCCATGAGAAATTATA+TGG | - | chr7_4:20098143-20098162 | Msa1144120:intron | 35.0% | |
!!! | ATGGGGATATCTCTTTTTTC+AGG | + | chr7_4:20098184-20098203 | None:intergenic | 35.0% |
AAAGAGATATCCCCATTACT+TGG | - | chr7_4:20098188-20098207 | Msa1144120:intron | 35.0% | |
TATACACAGTCCAAGTAATG+GGG | + | chr7_4:20098201-20098220 | None:intergenic | 35.0% | |
GTATACACAGTCCAAGTAAT+GGG | + | chr7_4:20098202-20098221 | None:intergenic | 35.0% | |
TGTATACACAGTCCAAGTAA+TGG | + | chr7_4:20098203-20098222 | None:intergenic | 35.0% | |
ATTACTTGGACTGTGTATAC+AGG | - | chr7_4:20098202-20098221 | Msa1144120:CDS | 35.0% | |
! | TGAGAAATTCCCATTGGTTA+AGG | - | chr7_4:20098274-20098293 | Msa1144120:CDS | 35.0% |
! | GAGAAATTCCCATTGGTTAA+GGG | - | chr7_4:20098275-20098294 | Msa1144120:CDS | 35.0% |
! | AGAAATTCCCATTGGTTAAG+GGG | - | chr7_4:20098276-20098295 | Msa1144120:CDS | 35.0% |
CTATGAATTCCTGTGTTTGA+GGG | + | chr7_4:20098491-20098510 | None:intergenic | 35.0% | |
TCTATGAATTCCTGTGTTTG+AGG | + | chr7_4:20098492-20098511 | None:intergenic | 35.0% | |
TCAAACACAGGAATTCATAG+AGG | - | chr7_4:20098491-20098510 | Msa1144120:intron | 35.0% | |
TTTCATCTGTTAATTGCACC+TGG | - | chr7_4:20098607-20098626 | Msa1144120:CDS | 35.0% | |
ATAACAGAAGAAGATTGTCC+AGG | + | chr7_4:20098628-20098647 | None:intergenic | 35.0% | |
GTAATCCCTAAATCACTAGT+AGG | - | chr7_4:20098672-20098691 | Msa1144120:intron | 35.0% | |
CAAGTACCTACTAGTGATTT+AGG | + | chr7_4:20098681-20098700 | None:intergenic | 35.0% | |
! | GAATTAAGCTCGTTGATTAC+TGG | + | chr7_4:20098757-20098776 | None:intergenic | 35.0% |
AATCAACGAGCTTAATTCTC+TGG | - | chr7_4:20098759-20098778 | Msa1144120:intron | 35.0% | |
CCTGTTAAACCATTTCAAAC+AGG | + | chr7_4:20099018-20099037 | None:intergenic | 35.0% | |
! | CCTGTTTGAAATGGTTTAAC+AGG | - | chr7_4:20099015-20099034 | Msa1144120:intron | 35.0% |
AAATGCAAAGTGAGAGAAAG+AGG | + | chr7_4:20099115-20099134 | None:intergenic | 35.0% | |
AAAAGCCTGCATTCTTCAAT+AGG | + | chr7_4:20099143-20099162 | None:intergenic | 35.0% | |
GTTTGGCTGAATTAGAACAA+TGG | - | chr7_4:20099249-20099268 | Msa1144120:CDS | 35.0% | |
AAACATATTAGGCAAGCAGT+TGG | - | chr7_4:20099394-20099413 | Msa1144120:CDS | 35.0% | |
TGAAAACTGTGAATGTTACC+AGG | + | chr7_4:20099423-20099442 | None:intergenic | 35.0% | |
TGAAAGAGAAAAATGAGAGC+CGG | + | chr7_4:20099487-20099506 | None:intergenic | 35.0% | |
ATTTCATTCAGGGACTTCTT+AGG | + | chr7_4:20099526-20099545 | None:intergenic | 35.0% | |
GTCCCTGAATGAAATAACTA+AGG | - | chr7_4:20099531-20099550 | Msa1144120:intron | 35.0% | |
!! | TATAACATTTTGGCGTTGCA+GGG | - | chr7_4:20099632-20099651 | Msa1144120:intron | 35.0% |
ACAGGATAAGTACAATGTAC+TGG | - | chr7_4:20099682-20099701 | Msa1144120:intron | 35.0% | |
CAGGATAAGTACAATGTACT+GGG | - | chr7_4:20099683-20099702 | Msa1144120:intron | 35.0% | |
ATGTACTGGGATGACAAATA+CGG | - | chr7_4:20099696-20099715 | Msa1144120:intron | 35.0% | |
! | TTTTGTACAATTCCCAAGCT+GGG | - | chr7_4:20099825-20099844 | Msa1144120:intron | 35.0% |
! | GATAATTCTATGGACTATGC+AGG | - | chr7_4:20099888-20099907 | Msa1144120:intron | 35.0% |
TTCTACTTCTTGCATGGATT+TGG | + | chr7_4:20100114-20100133 | None:intergenic | 35.0% | |
CTAACTCAGGCTTCTATTAT+TGG | - | chr7_4:20100337-20100356 | Msa1144120:intron | 35.0% | |
GGGTAATAATGAATTAACCC+AGG | + | chr7_4:20100370-20100389 | None:intergenic | 35.0% | |
! | TCACGTTGATGAAACTTGAA+GGG | + | chr7_4:20100390-20100409 | None:intergenic | 35.0% |
! | TTCAAGTTTCATCAACGTGA+GGG | - | chr7_4:20100390-20100409 | Msa1144120:intron | 35.0% |
GAAAAAACAAAACCTTGAGC+AGG | + | chr7_4:20100509-20100528 | None:intergenic | 35.0% | |
! | AACTCCAAGAATTGGTTCAG+AGG | - | chr7_4:20095917-20095936 | Msa1144120:three_prime_UTR | 40.0% |
CTAACCTCTGAACCAATTCT+TGG | + | chr7_4:20095924-20095943 | None:intergenic | 40.0% | |
TTGACACAGATAAAGTGCAG+AGG | + | chr7_4:20096201-20096220 | None:intergenic | 40.0% | |
! | AGATGAAAGCACGTGAATCA+TGG | + | chr7_4:20096266-20096285 | None:intergenic | 40.0% |
!!! | CATCTAACCGTGTTAGCTTT+TGG | - | chr7_4:20096281-20096300 | Msa1144120:CDS | 40.0% |
! | TATATCCTGTTAGATGGGCT+TGG | + | chr7_4:20096392-20096411 | None:intergenic | 40.0% |
!! | GGACTAAAGTTTGTTGACAG+AGG | + | chr7_4:20096732-20096751 | None:intergenic | 40.0% |
!!! | CACACATATTTTTGGGACAG+CGG | - | chr7_4:20096751-20096770 | Msa1144120:intron | 40.0% |
TGAGTGGACAAATGGTTGAA+AGG | + | chr7_4:20096791-20096810 | None:intergenic | 40.0% | |
AAGGCACACAATTACATGAG+TGG | + | chr7_4:20096807-20096826 | None:intergenic | 40.0% | |
CTCATGTAATTGTGTGCCTT+TGG | - | chr7_4:20096807-20096826 | Msa1144120:intron | 40.0% | |
ATATGGTTATTAACGGGGAG+AGG | + | chr7_4:20096859-20096878 | None:intergenic | 40.0% | |
TTCCTCCAATCTGCATTGTA+TGG | + | chr7_4:20096925-20096944 | None:intergenic | 40.0% | |
!! | TTCAGAGCATTTCCGTTTTC+TGG | + | chr7_4:20097144-20097163 | None:intergenic | 40.0% |
! | GAAAACGGAAATGCTCTGAA+TGG | - | chr7_4:20097144-20097163 | Msa1144120:CDS | 40.0% |
CTGAATGGTGAAGCAAAAAC+TGG | - | chr7_4:20097159-20097178 | Msa1144120:CDS | 40.0% | |
GCAAAAACTGGATCAGTAAG+AGG | - | chr7_4:20097171-20097190 | Msa1144120:CDS | 40.0% | |
AATGACAAACCACAAGTGAG+TGG | - | chr7_4:20097354-20097373 | Msa1144120:CDS | 40.0% | |
!!! | CTTTTTGGTTCAGGAAAACC+AGG | - | chr7_4:20097455-20097474 | Msa1144120:intron | 40.0% |
ATAAATGCCTTCTACACTGG+AGG | - | chr7_4:20097555-20097574 | Msa1144120:CDS | 40.0% | |
AACAATAGCTTCAGCTGTTG+AGG | - | chr7_4:20097622-20097641 | Msa1144120:intron | 40.0% | |
TCAATGATGCAGAACAGTGT+TGG | + | chr7_4:20097737-20097756 | None:intergenic | 40.0% | |
ACACTGTTCTGCATCATTGA+AGG | - | chr7_4:20097737-20097756 | Msa1144120:intron | 40.0% | |
GAGAAGATGATGCTGTTCTT+CGG | + | chr7_4:20097875-20097894 | None:intergenic | 40.0% | |
ACAGCATCATCTTCTCTGTT+TGG | - | chr7_4:20097879-20097898 | Msa1144120:intron | 40.0% | |
!! | TTGTGATTTTAGGGGCTAAG+GGG | - | chr7_4:20098005-20098024 | Msa1144120:intron | 40.0% |
AAGTACACAACCCACAAAAC+CGG | + | chr7_4:20098374-20098393 | None:intergenic | 40.0% | |
TTATAGAGACCCTCAAACAC+AGG | - | chr7_4:20098479-20098498 | Msa1144120:intron | 40.0% | |
! | TAGAGGCACATTGTCTGTAA+CGG | - | chr7_4:20098508-20098527 | Msa1144120:CDS | 40.0% |
! | TTTTACTAAACCTTGACGGG+AGG | + | chr7_4:20098839-20098858 | None:intergenic | 40.0% |
TCCCGTCAAGGTTTAGTAAA+AGG | - | chr7_4:20098838-20098857 | Msa1144120:CDS | 40.0% | |
! | CCCTTTTACTAAACCTTGAC+GGG | + | chr7_4:20098842-20098861 | None:intergenic | 40.0% |
CCCGTCAAGGTTTAGTAAAA+GGG | - | chr7_4:20098839-20098858 | Msa1144120:CDS | 40.0% | |
! | GCCCTTTTACTAAACCTTGA+CGG | + | chr7_4:20098843-20098862 | None:intergenic | 40.0% |
! | AGCAAGCTTTAATAGCTCAC+TGG | - | chr7_4:20098887-20098906 | Msa1144120:CDS | 40.0% |
CGGAAATGCAGAAACTGAAA+GGG | + | chr7_4:20098975-20098994 | None:intergenic | 40.0% | |
ACGGAAATGCAGAAACTGAA+AGG | + | chr7_4:20098976-20098995 | None:intergenic | 40.0% | |
ATATTTGGGTGAACACCTTG+CGG | + | chr7_4:20099057-20099076 | None:intergenic | 40.0% | |
CATGTCCTATTGAAGAATGC+AGG | - | chr7_4:20099135-20099154 | Msa1144120:intron | 40.0% | |
! | GAAGAATGCAGGCTTTTTGA+TGG | - | chr7_4:20099146-20099165 | Msa1144120:intron | 40.0% |
!!! | GCTTTTTGATGGACTTGATC+TGG | - | chr7_4:20099157-20099176 | Msa1144120:intron | 40.0% |
! | GAGTGTTGTTCATTCAGCAA+CGG | - | chr7_4:20099209-20099228 | Msa1144120:intron | 40.0% |
! | AGTGTTGTTCATTCAGCAAC+GGG | - | chr7_4:20099210-20099229 | Msa1144120:intron | 40.0% |
ATTAGAACAATGGTGCATCG+AGG | - | chr7_4:20099259-20099278 | Msa1144120:CDS | 40.0% | |
! | TTGTTTACAGTACACTGGCT+CGG | - | chr7_4:20099357-20099376 | Msa1144120:intron | 40.0% |
GGGAGGAACTGAAACATATT+AGG | - | chr7_4:20099383-20099402 | Msa1144120:CDS | 40.0% | |
!! | GGCTCTCATTTTTCTCTTTC+AGG | - | chr7_4:20099486-20099505 | Msa1144120:intron | 40.0% |
!! | GTATAACATTTTGGCGTTGC+AGG | - | chr7_4:20099631-20099650 | Msa1144120:intron | 40.0% |
! | CTTTTGTACAATTCCCAAGC+TGG | - | chr7_4:20099824-20099843 | Msa1144120:intron | 40.0% |
TACAACAACCATGAGAGCTA+TGG | - | chr7_4:20099912-20099931 | Msa1144120:intron | 40.0% | |
TCGAGGTATAGTATCAGTTC+AGG | - | chr7_4:20099988-20100007 | Msa1144120:intron | 40.0% | |
AATGCTGCATCCAAATCCAA+AGG | + | chr7_4:20100069-20100088 | None:intergenic | 40.0% | |
! | TGGATGCAGCATTCCATTTT+CGG | - | chr7_4:20100076-20100095 | Msa1144120:intron | 40.0% |
AGCAACTTCTACTTCTTGCA+TGG | + | chr7_4:20100120-20100139 | None:intergenic | 40.0% | |
TCTATTATTGGTGAGTTGCC+TGG | - | chr7_4:20100349-20100368 | Msa1144120:intron | 40.0% | |
CTATTATTGGTGAGTTGCCT+GGG | - | chr7_4:20100350-20100369 | Msa1144120:intron | 40.0% | |
! | CTCACGTTGATGAAACTTGA+AGG | + | chr7_4:20100391-20100410 | None:intergenic | 40.0% |
! | CTTCAAGTTTCATCAACGTG+AGG | - | chr7_4:20100389-20100408 | Msa1144120:intron | 40.0% |
TCAAGTTTCATCAACGTGAG+GGG | - | chr7_4:20100391-20100410 | Msa1144120:intron | 40.0% | |
ATGTGACAAATGGCGATCAT+AGG | - | chr7_4:20100441-20100460 | Msa1144120:intron | 40.0% | |
! | AGGTTTGTGAGTCTTATACG+TGG | - | chr7_4:20100539-20100558 | Msa1144120:CDS | 40.0% |
! | GGTTTGTGAGTCTTATACGT+GGG | - | chr7_4:20100540-20100559 | Msa1144120:CDS | 40.0% |
AAATGATCACACGTCTGTAC+AGG | + | chr7_4:20100704-20100723 | None:intergenic | 40.0% | |
ACGTACAGAACGCGATTGAA+TGG | + | chr7_4:20095681-20095700 | None:intergenic | 45.0% | |
ATCGCGTTCTGTACGTAGAA+AGG | - | chr7_4:20095685-20095704 | Msa1144120:three_prime_UTR | 45.0% | |
GTACCGCACACAACAATTGA+TGG | + | chr7_4:20095729-20095748 | None:intergenic | 45.0% | |
AGAAGAAGCCAAAAGAGCTC+AGG | - | chr7_4:20095828-20095847 | Msa1144120:intron | 45.0% | |
TGAGACTGAAGCCAGAAGTA+AGG | - | chr7_4:20095852-20095871 | Msa1144120:three_prime_UTR | 45.0% | |
GGAGCTGTTTAAAAAGGTCG+AGG | - | chr7_4:20095873-20095892 | Msa1144120:three_prime_UTR | 45.0% | |
! | CTTGGAGTTGATCCGCTTTA+CGG | + | chr7_4:20095906-20095925 | None:intergenic | 45.0% |
AGCGGATCAACTCCAAGAAT+TGG | - | chr7_4:20095909-20095928 | Msa1144120:three_prime_UTR | 45.0% | |
CACAGTGGAGTGTAATGACA+TGG | + | chr7_4:20096629-20096648 | None:intergenic | 45.0% | |
CGCTGTCCCAAAAATATGTG+TGG | + | chr7_4:20096753-20096772 | None:intergenic | 45.0% | |
CTCCATACAATGCAGATTGG+AGG | - | chr7_4:20096920-20096939 | Msa1144120:intron | 45.0% | |
ATGCAGAGGACACCAGAAAA+CGG | - | chr7_4:20097129-20097148 | Msa1144120:CDS | 45.0% | |
AGATTCAGGCTCACGTACAT+TGG | + | chr7_4:20097310-20097329 | None:intergenic | 45.0% | |
TGTGGCTTTCCTTCAGATTC+AGG | + | chr7_4:20097324-20097343 | None:intergenic | 45.0% | |
TCTATGTAGCCACTCACTTG+TGG | + | chr7_4:20097366-20097385 | None:intergenic | 45.0% | |
TGCATTCGATCAACAAGTCC+TGG | + | chr7_4:20097476-20097495 | None:intergenic | 45.0% | |
GGAAAAACGCATGCAGCAAT+AGG | + | chr7_4:20097531-20097550 | None:intergenic | 45.0% | |
CAAATGACCTCCAGTGTAGA+AGG | + | chr7_4:20097565-20097584 | None:intergenic | 45.0% | |
GCAAAAGCCCCTTAACCAAT+GGG | + | chr7_4:20098286-20098305 | None:intergenic | 45.0% | |
TGCAAAAGCCCCTTAACCAA+TGG | + | chr7_4:20098287-20098306 | None:intergenic | 45.0% | |
! | TGGTTAAGGGGCTTTTGCAA+TGG | - | chr7_4:20098288-20098307 | Msa1144120:CDS | 45.0% |
TGCAATGGACCAATCGTACT+TGG | - | chr7_4:20098303-20098322 | Msa1144120:CDS | 45.0% | |
TAAAACAACTGCAGGCTCCA+AGG | - | chr7_4:20098812-20098831 | Msa1144120:CDS | 45.0% | |
TTAACAGGCACCTCCTTTCT+TGG | - | chr7_4:20099030-20099049 | Msa1144120:intron | 45.0% | |
! | GTGTTGTTCATTCAGCAACG+GGG | - | chr7_4:20099211-20099230 | Msa1144120:intron | 45.0% |
GGAGTATGTGAAGACAGGTT+TGG | - | chr7_4:20099232-20099251 | Msa1144120:intron | 45.0% | |
AACTCACAGTGTGTCTACAG+AGG | - | chr7_4:20099719-20099738 | Msa1144120:intron | 45.0% | |
GACAGCATTAGTAGAGTCCT+CGG | + | chr7_4:20099941-20099960 | None:intergenic | 45.0% | |
CGAGTCATCGTCTAATAGGA+AGG | + | chr7_4:20099971-20099990 | None:intergenic | 45.0% | |
TCCTATTAGACGATGACTCG+AGG | - | chr7_4:20099971-20099990 | Msa1144120:intron | 45.0% | |
ACCTCGAGTCATCGTCTAAT+AGG | + | chr7_4:20099975-20099994 | None:intergenic | 45.0% | |
! | ATGCAGCATTCCATTTTCGG+TGG | - | chr7_4:20100079-20100098 | Msa1144120:intron | 45.0% |
GAGATGTCATCCACCGAAAA+TGG | + | chr7_4:20100092-20100111 | None:intergenic | 45.0% | |
AGAAGTAGAAGTTGCTGACG+TGG | - | chr7_4:20100124-20100143 | Msa1144120:intron | 45.0% | |
CGTTGATACGTGAGAACTCA+GGG | - | chr7_4:20100156-20100175 | Msa1144120:intron | 45.0% | |
ATACGTGAGAACTCAGGGTT+TGG | - | chr7_4:20100161-20100180 | Msa1144120:intron | 45.0% | |
TACGTGAGAACTCAGGGTTT+GGG | - | chr7_4:20100162-20100181 | Msa1144120:intron | 45.0% | |
TTGTCACATGCATTGGGACA+TGG | + | chr7_4:20100430-20100449 | None:intergenic | 45.0% | |
GTCCCAATGCATGTGACAAA+TGG | - | chr7_4:20100431-20100450 | Msa1144120:intron | 45.0% | |
CGCCATTTGTCACATGCATT+GGG | + | chr7_4:20100436-20100455 | None:intergenic | 45.0% | |
TCGCCATTTGTCACATGCAT+TGG | + | chr7_4:20100437-20100456 | None:intergenic | 45.0% | |
GATCATAGGTACAGCCATAC+AGG | - | chr7_4:20100455-20100474 | Msa1144120:intron | 45.0% | |
TGACTGGACAACAACCTGTA+TGG | + | chr7_4:20100472-20100491 | None:intergenic | 45.0% | |
GGTGTGACAACAACAATGAC+TGG | + | chr7_4:20100488-20100507 | None:intergenic | 45.0% | |
! | AGTCTCAGCCTGAGCTCTTT+TGG | + | chr7_4:20095839-20095858 | None:intergenic | 50.0% |
CGAGGATTCTGACCGTAAAG+CGG | - | chr7_4:20095891-20095910 | Msa1144120:three_prime_UTR | 50.0% | |
! | CTGTTAGATGGGCTTGGATC+AGG | + | chr7_4:20096386-20096405 | None:intergenic | 50.0% |
CTGATCCAAGCCCATCTAAC+AGG | - | chr7_4:20096384-20096403 | Msa1144120:intron | 50.0% | |
AGTTCTTCGCCAGCAAGCAT+TGG | - | chr7_4:20096974-20096993 | Msa1144120:intron | 50.0% | |
GTGATACAGCCAATGCTTGC+TGG | + | chr7_4:20096986-20097005 | None:intergenic | 50.0% | |
! | GCAGCAAGAGCTTTTGCAGT+TGG | + | chr7_4:20097008-20097027 | None:intergenic | 50.0% |
GTACGTGAGCCTGAATCTGA+AGG | - | chr7_4:20097312-20097331 | Msa1144120:intron | 50.0% | |
TTCTGCATCATTGAAGGCCC+AGG | - | chr7_4:20097743-20097762 | Msa1144120:intron | 50.0% | |
AGCAGCTCCACTTGCTTTGA+GGG | + | chr7_4:20097835-20097854 | None:intergenic | 50.0% | |
TAGCAGCTCCACTTGCTTTG+AGG | + | chr7_4:20097836-20097855 | None:intergenic | 50.0% | |
AATGGCAATCCAGCACTCTG+AGG | + | chr7_4:20098035-20098054 | None:intergenic | 50.0% | |
CGAGGTCTTAGTAGACTCGA+TGG | - | chr7_4:20098065-20098084 | Msa1144120:intron | 50.0% | |
AACACCTTGCGGACCAAGAA+AGG | + | chr7_4:20099046-20099065 | None:intergenic | 50.0% | |
! | AACGGGGAGTATGTGAAGAC+AGG | - | chr7_4:20099227-20099246 | Msa1144120:intron | 50.0% |
TAGGCAAGCAGTTGGATTCC+TGG | - | chr7_4:20099402-20099421 | Msa1144120:CDS | 50.0% | |
!! | GAAAGAGAGAAGGCACTCAC+TGG | + | chr7_4:20099565-20099584 | None:intergenic | 50.0% |
TGGGTTCTTACTAGCTCGCT+CGG | - | chr7_4:20100181-20100200 | Msa1144120:intron | 50.0% | |
GCCTCTATCGCTCCATCTTA+CGG | - | chr7_4:20100231-20100250 | Msa1144120:intron | 50.0% | |
CCTCTATCGCTCCATCTTAC+GGG | - | chr7_4:20100232-20100251 | Msa1144120:intron | 50.0% | |
TGCATCTTTGTGCAGTCACC+CGG | + | chr7_4:20100263-20100282 | None:intergenic | 50.0% | |
GTTGTTGTCACACCTGCTCA+AGG | - | chr7_4:20100494-20100513 | Msa1144120:CDS | 50.0% | |
TGGATCAGGCTCGTAAGGTG+AGG | + | chr7_4:20096372-20096391 | None:intergenic | 55.0% | |
!! | CACTTGCTTTGAGGGTGCGT+TGG | + | chr7_4:20097827-20097846 | None:intergenic | 55.0% |
CAACGCACCCTCAAAGCAAG+TGG | - | chr7_4:20097825-20097844 | Msa1144120:intron | 55.0% | |
GATGCTGTTCTTCGGCGTTG+TGG | + | chr7_4:20097867-20097886 | None:intergenic | 55.0% | |
!! | ACCTCACCAGCCGGTTTTGT+GGG | - | chr7_4:20098361-20098380 | Msa1144120:CDS | 55.0% |
ACACAACCCACAAAACCGGC+TGG | + | chr7_4:20098370-20098389 | None:intergenic | 55.0% | |
AAACCTTGACGGGAGGTCCT+TGG | + | chr7_4:20098832-20098851 | None:intergenic | 55.0% | |
ACCTCCTTTCTTGGTCCGCA+AGG | - | chr7_4:20099039-20099058 | Msa1144120:intron | 55.0% | |
ACCTTGCGGACCAAGAAAGG+AGG | + | chr7_4:20099043-20099062 | None:intergenic | 55.0% | |
ATGGTGCATCGAGGCAACAG+AGG | - | chr7_4:20099268-20099287 | Msa1144120:intron | 55.0% | |
ATCGCAGCTGTTCCCAGCTT+GGG | + | chr7_4:20099840-20099859 | None:intergenic | 55.0% | |
CTCGGCAACCATAGCTCTCA+TGG | + | chr7_4:20099923-20099942 | None:intergenic | 55.0% | |
CATGAGAGCTATGGTTGCCG+AGG | - | chr7_4:20099921-20099940 | Msa1144120:intron | 55.0% | |
CCCGTAAGATGGAGCGATAG+AGG | + | chr7_4:20100235-20100254 | None:intergenic | 55.0% | |
CTCCATCTTACGGGTATCCC+CGG | - | chr7_4:20100241-20100260 | Msa1144120:intron | 55.0% | |
TCCATCTTACGGGTATCCCC+GGG | - | chr7_4:20100242-20100261 | Msa1144120:intron | 55.0% | |
CATCTTTGTGCAGTCACCCG+GGG | + | chr7_4:20100261-20100280 | None:intergenic | 55.0% | |
GCATCTTTGTGCAGTCACCC+GGG | + | chr7_4:20100262-20100281 | None:intergenic | 55.0% | |
GGGTGACTGCACAAAGATGC+AGG | - | chr7_4:20100262-20100281 | Msa1144120:intron | 55.0% | |
GGGCTTGGATCAGGCTCGTA+AGG | + | chr7_4:20096377-20096396 | None:intergenic | 60.0% | |
AGGGGATCTCCTCAGAGTGC+TGG | - | chr7_4:20098023-20098042 | Msa1144120:intron | 60.0% | |
CAAAACCGGCTGGTGAGGTG+AGG | + | chr7_4:20098360-20098379 | None:intergenic | 60.0% | |
!! | CACCTCACCAGCCGGTTTTG+TGG | - | chr7_4:20098360-20098379 | Msa1144120:CDS | 60.0% |
ACCCACAAAACCGGCTGGTG+AGG | + | chr7_4:20098365-20098384 | None:intergenic | 60.0% | |
! | AGGGCGCTCACATGCTAACG+CGG | - | chr7_4:20098858-20098877 | Msa1144120:CDS | 60.0% |
GTGCATCGAGGCAACAGAGG+AGG | - | chr7_4:20099271-20099290 | Msa1144120:intron | 60.0% | |
!! | TACAGTACACTGGCTCGGCG+TGG | - | chr7_4:20099362-20099381 | Msa1144120:intron | 60.0% |
!! | ACAGTACACTGGCTCGGCGT+GGG | - | chr7_4:20099363-20099382 | Msa1144120:intron | 60.0% |
CATCGCAGCTGTTCCCAGCT+TGG | + | chr7_4:20099841-20099860 | None:intergenic | 60.0% | |
ACCCGGGGATACCCGTAAGA+TGG | + | chr7_4:20100246-20100265 | None:intergenic | 60.0% | |
GCGATCCTCACCTCACCAGC+CGG | - | chr7_4:20098352-20098371 | Msa1144120:CDS | 65.0% | |
GCTCCAAGGACCTCCCGTCA+AGG | - | chr7_4:20098826-20098845 | Msa1144120:CDS | 65.0% | |
!! | GTACACTGGCTCGGCGTGGG+AGG | - | chr7_4:20099366-20099385 | Msa1144120:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 20095656 | 20100765 | 20095656 | ID=Msa1144120;Name=Msa1144120 |
chr7_4 | mRNA | 20095656 | 20100765 | 20095656 | ID=Msa1144120-mRNA-1;Parent=Msa1144120;Name=Msa1144120-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.75|0.64|0.94|0.93|0.88|17|537|532 |
chr7_4 | exon | 20095656 | 20095812 | 20095656 | ID=Msa1144120-mRNA-1:exon:4800;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20095833 | 20096336 | 20095833 | ID=Msa1144120-mRNA-1:exon:4799;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20096429 | 20096511 | 20096429 | ID=Msa1144120-mRNA-1:exon:4798;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20096724 | 20096768 | 20096724 | ID=Msa1144120-mRNA-1:exon:4797;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20096857 | 20096913 | 20096857 | ID=Msa1144120-mRNA-1:exon:4796;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20096998 | 20097054 | 20096998 | ID=Msa1144120-mRNA-1:exon:4795;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20097129 | 20097228 | 20097129 | ID=Msa1144120-mRNA-1:exon:4794;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20097314 | 20097384 | 20097314 | ID=Msa1144120-mRNA-1:exon:4793;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20097458 | 20097595 | 20097458 | ID=Msa1144120-mRNA-1:exon:4792;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20098198 | 20098404 | 20098198 | ID=Msa1144120-mRNA-1:exon:4791;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20098507 | 20098662 | 20098507 | ID=Msa1144120-mRNA-1:exon:4790;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20098810 | 20098953 | 20098810 | ID=Msa1144120-mRNA-1:exon:4789;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20099053 | 20099133 | 20099053 | ID=Msa1144120-mRNA-1:exon:4788;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20099236 | 20099286 | 20099236 | ID=Msa1144120-mRNA-1:exon:4787;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20099381 | 20099486 | 20099381 | ID=Msa1144120-mRNA-1:exon:4786;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20100483 | 20100622 | 20100483 | ID=Msa1144120-mRNA-1:exon:4785;Parent=Msa1144120-mRNA-1 |
chr7_4 | exon | 20100727 | 20100765 | 20100727 | ID=Msa1144120-mRNA-1:exon:4784;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20100727 | 20100765 | 20100727 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20100483 | 20100622 | 20100483 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20099381 | 20099486 | 20099381 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20099236 | 20099286 | 20099236 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20099053 | 20099133 | 20099053 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20098810 | 20098953 | 20098810 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20098507 | 20098662 | 20098507 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20098198 | 20098404 | 20098198 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20097458 | 20097595 | 20097458 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20097314 | 20097384 | 20097314 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20097129 | 20097228 | 20097129 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20096998 | 20097054 | 20096998 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20096857 | 20096913 | 20096857 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20096724 | 20096768 | 20096724 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20096429 | 20096511 | 20096429 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | CDS | 20096213 | 20096336 | 20096213 | ID=Msa1144120-mRNA-1:cds;Parent=Msa1144120-mRNA-1 |
chr7_4 | three_prime_UTR | 20095833 | 20096212 | 20095833 | ID=Msa1144120-mRNA-1:three_prime_utr;Parent=Msa1144120-mRNA-1 |
chr7_4 | three_prime_UTR | 20095656 | 20095812 | 20095656 | ID=Msa1144120-mRNA-1:three_prime_utr;Parent=Msa1144120-mRNA-1 |
Gene Sequence |
Protein sequence |