Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145100 | KEH23255.1 | 78.505 | 214 | 15 | 2 | 1 | 183 | 1 | 214 | 1.07e-110 | 326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145100 | sp|Q42808|TBP_SOYBN | 83.333 | 192 | 5 | 1 | 1 | 165 | 1 | 192 | 2.72e-111 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145100 | A0A072UBM6 | 78.505 | 214 | 15 | 2 | 1 | 183 | 1 | 214 | 5.11e-111 | 326 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1026250 | Msa1145100 | 0.910135 | 2.626704e-82 | -8.615850e-47 |
| Msa1145100 | Msa1153770 | 0.809583 | 1.761525e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145100 | MtrunA17_Chr7g0244531 | 84.896 | 192 | 2 | 1 | 1 | 165 | 1 | 192 | 6.35e-114 | 323 |
| Msa1145100 | MtrunA17_Chr4g0013121 | 82.022 | 178 | 5 | 1 | 1 | 151 | 1 | 178 | 4.67e-99 | 284 |
| Msa1145100 | MtrunA17_Chr3g0110921 | 56.716 | 201 | 60 | 1 | 1 | 174 | 15 | 215 | 2.43e-70 | 213 |
| Msa1145100 | MtrunA17_Chr3g0111031 | 58.678 | 121 | 33 | 1 | 29 | 149 | 89 | 192 | 1.37e-37 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145100 | AT1G55520.2 | 79.688 | 192 | 12 | 1 | 1 | 165 | 1 | 192 | 4.46e-107 | 305 |
| Msa1145100 | AT1G55520.1 | 79.688 | 192 | 12 | 1 | 1 | 165 | 1 | 192 | 4.46e-107 | 305 |
| Msa1145100 | AT1G55520.4 | 79.688 | 192 | 12 | 1 | 1 | 165 | 1 | 192 | 4.46e-107 | 305 |
| Msa1145100 | AT3G13445.1 | 79.167 | 192 | 13 | 1 | 1 | 165 | 1 | 192 | 4.76e-106 | 302 |
| Msa1145100 | AT1G55520.3 | 80.226 | 177 | 8 | 1 | 1 | 150 | 1 | 177 | 3.39e-96 | 277 |
| Msa1145100 | AT3G13445.2 | 79.661 | 177 | 9 | 1 | 1 | 150 | 1 | 177 | 1.72e-95 | 276 |
Find 71 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCTTCCCCGCTAAGTTTA+AGG | 0.162066 | 7_4:+21615767 | Msa1145100:CDS |
| TTGAGGGATCTGAGAGAAAT+TGG | 0.225121 | 7_4:-21613047 | None:intergenic |
| TAGCGGGGAAGCCCAGTTTC+TGG | 0.228240 | 7_4:-21615758 | None:intergenic |
| TTGTAATAAGGGGTATAAAA+AGG | 0.240480 | 7_4:-21612954 | None:intergenic |
| AAGAACCCTACTTAAAATTA+AGG | 0.244771 | 7_4:-21617529 | None:intergenic |
| TGAAGTGAGAATTTGTAATA+AGG | 0.258956 | 7_4:-21612966 | None:intergenic |
| GTATTGCTTATATTCGTATC+TGG | 0.259998 | 7_4:+21616610 | Msa1145100:CDS |
| ATATTGAGACAGAAGATATT+TGG | 0.277193 | 7_4:+21617318 | Msa1145100:three_prime_UTR |
| TGCTAGAATTATCCAGAAAC+TGG | 0.288731 | 7_4:+21615746 | Msa1145100:CDS |
| AGGTAGCCAACAACAGTAAA+AGG | 0.299090 | 7_4:-21617509 | None:intergenic |
| TATGAACCAGAGTTGTTTCC+AGG | 0.329714 | 7_4:+21616556 | Msa1145100:CDS |
| GAAGTGAGAATTTGTAATAA+GGG | 0.360756 | 7_4:-21612965 | None:intergenic |
| GATCTATCAAAGCATCCTTC+TGG | 0.372034 | 7_4:+21613455 | Msa1145100:CDS |
| GAGTGAGGTGCAATCAAAAT+TGG | 0.374093 | 7_4:+21615463 | Msa1145100:CDS |
| GAATATAAGCAATACTATCT+TGG | 0.376880 | 7_4:-21616602 | None:intergenic |
| TAAGAGTGAATAGGAGCTTA+TGG | 0.378139 | 7_4:+21613400 | Msa1145100:exon |
| GTTGGCTCCCTTCCAATCCT+TGG | 0.414450 | 7_4:-21613427 | None:intergenic |
| TGAATGAAGAAGAGTGTGTT+TGG | 0.417642 | 7_4:-21613006 | None:intergenic |
| CAGAGAGGAACGTGGATTGT+AGG | 0.421347 | 7_4:+21617279 | Msa1145100:CDS |
| CTGCTGTGATTATGAGGATC+CGG | 0.422520 | 7_4:+21614702 | Msa1145100:CDS |
| AGAAGAAATGATGGATCTGT+TGG | 0.437001 | 7_4:-21612886 | None:intergenic |
| TATACAAATTAAGAGTGAAT+AGG | 0.441761 | 7_4:+21613391 | Msa1145100:five_prime_UTR |
| AATATAAGCAATACTATCTT+GGG | 0.443178 | 7_4:-21616601 | None:intergenic |
| TCAGAAAATATATTTAAAAG+AGG | 0.444497 | 7_4:+21617431 | Msa1145100:three_prime_UTR |
| AAGAGTGTGTTTGGAGAGAG+CGG | 0.453797 | 7_4:-21612997 | None:intergenic |
| AAAAGAACGTACCATCTTGC+CGG | 0.456865 | 7_4:-21614756 | None:intergenic |
| ATCAAAATTGGCAGCAAGGA+AGG | 0.463520 | 7_4:+21615475 | Msa1145100:CDS |
| ATATTTAAAAGAGGCTGAAA+AGG | 0.466815 | 7_4:+21617440 | Msa1145100:three_prime_UTR |
| TATTGCTTATATTCGTATCT+GGG | 0.466922 | 7_4:+21616611 | Msa1145100:CDS |
| AGTAGTACCTTAAACTTAGC+GGG | 0.472811 | 7_4:-21615774 | None:intergenic |
| AGAAATTGGAGTTGAAATGA+AGG | 0.475515 | 7_4:-21613033 | None:intergenic |
| TTTAAGATTCAGAACATTGT+CGG | 0.475654 | 7_4:+21615921 | Msa1145100:CDS |
| TGCCATTGGTAGGTCTGTAC+TGG | 0.475952 | 7_4:+21615434 | Msa1145100:intron |
| TGCAAGACCCTCCAGCCGTA+TGG | 0.489380 | 7_4:-21615964 | None:intergenic |
| TTCATTCGATAGATTAGTCC+TGG | 0.490443 | 7_4:-21616574 | None:intergenic |
| GCAAGACCCTCCAGCCGTAT+GGG | 0.496807 | 7_4:-21615963 | None:intergenic |
| GCTTATGGCTGACCAAGGAT+TGG | 0.510788 | 7_4:+21613415 | Msa1145100:exon |
| GGATGCTTTGATAGATCCAC+AGG | 0.531550 | 7_4:-21613449 | None:intergenic |
| AGAGAGATTGTGAATGCGAT+TGG | 0.539251 | 7_4:-21612912 | None:intergenic |
| TGTCAAGTTCCCCATACGGC+TGG | 0.541848 | 7_4:+21615953 | Msa1145100:CDS |
| AGAGTGTGTTTGGAGAGAGC+GGG | 0.543632 | 7_4:-21612996 | None:intergenic |
| CTGTTGGATTATGAAGATAG+AGG | 0.546558 | 7_4:-21612870 | None:intergenic |
| AAAGAAACTCACTGAAGAGT+AGG | 0.550288 | 7_4:-21613485 | None:intergenic |
| TCTGGGAAAATTGTTCTGAC+AGG | 0.552768 | 7_4:+21616628 | Msa1145100:CDS |
| ATTAGTCCTGGAAACAACTC+TGG | 0.559444 | 7_4:-21616562 | None:intergenic |
| ATGGCTGACCAAGGATTGGA+AGG | 0.560659 | 7_4:+21613419 | Msa1145100:CDS |
| TGCAATCAAAATTGGCAGCA+AGG | 0.561827 | 7_4:+21615471 | Msa1145100:CDS |
| AAGTGAGAATTTGTAATAAG+GGG | 0.563510 | 7_4:-21612964 | None:intergenic |
| GAAATTGGAGTTGAAATGAA+GGG | 0.565346 | 7_4:-21613032 | None:intergenic |
| AGATAGAGGAGAGAGAATGA+AGG | 0.566625 | 7_4:-21612856 | None:intergenic |
| CAAGTTCCCCATACGGCTGG+AGG | 0.572877 | 7_4:+21615956 | Msa1145100:CDS |
| GATTGGAAGAGAAGAAATGA+TGG | 0.579792 | 7_4:-21612895 | None:intergenic |
| GTGATGTCAAGTTCCCCATA+CGG | 0.581797 | 7_4:+21615949 | Msa1145100:CDS |
| AATTGTTCTGACAGGAGCCA+AGG | 0.589296 | 7_4:+21616636 | Msa1145100:CDS |
| AAGTAGTACCTTAAACTTAG+CGG | 0.590355 | 7_4:-21615775 | None:intergenic |
| CACTGGATATATGTTCTCAA+AGG | 0.592156 | 7_4:-21616773 | None:intergenic |
| TGCTGTGATTATGAGGATCC+GGG | 0.596602 | 7_4:+21614703 | Msa1145100:CDS |
| TATCATCATGAGTAAGAGCA+AGG | 0.599234 | 7_4:+21617248 | Msa1145100:CDS |
| GAGGGTCTTGCATATTCCCA+CGG | 0.600585 | 7_4:+21615975 | Msa1145100:CDS |
| CAAGACCCTCCAGCCGTATG+GGG | 0.611024 | 7_4:-21615962 | None:intergenic |
| AAGTTCCCCATACGGCTGGA+GGG | 0.615249 | 7_4:+21615957 | Msa1145100:CDS |
| GCTTTGATAGATCCACAGGT+TGG | 0.629665 | 7_4:-21613445 | None:intergenic |
| TACACTTGAGAAAGCACCGT+GGG | 0.640895 | 7_4:-21615991 | None:intergenic |
| ATTGGAAGGGAGCCAACCTG+TGG | 0.653530 | 7_4:+21613433 | Msa1145100:CDS |
| GCTAGAATTATCCAGAAACT+GGG | 0.655602 | 7_4:+21615747 | Msa1145100:CDS |
| TGGCTGACCAAGGATTGGAA+GGG | 0.658521 | 7_4:+21613420 | Msa1145100:CDS |
| TAGGAGCTTATGGCTGACCA+AGG | 0.664090 | 7_4:+21613410 | Msa1145100:exon |
| GTAGTACCTTAAACTTAGCG+GGG | 0.665555 | 7_4:-21615773 | None:intergenic |
| AGAGTAGGCACAATTCCAGA+AGG | 0.669455 | 7_4:-21613470 | None:intergenic |
| CTGTACTGGAGCTAAGAGTG+AGG | 0.686066 | 7_4:+21615448 | Msa1145100:CDS |
| TTACACTTGAGAAAGCACCG+TGG | 0.825503 | 7_4:-21615992 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTAAAATGTTCATAA+TGG | + | chr7_4:21614081-21614100 | Msa1145100:intron | 10.0% |
| !! | TGATAAATATAAAATAAATC+TGG | - | chr7_4:21616263-21616282 | None:intergenic | 10.0% |
| !! | TATACTATATAAAAGAAATT+AGG | - | chr7_4:21616486-21616505 | None:intergenic | 10.0% |
| !! | GTAAAAATATAAAATTACAT+GGG | - | chr7_4:21616680-21616699 | None:intergenic | 10.0% |
| !!! | TTTTAATTTCAATTTTGTTT+AGG | + | chr7_4:21616729-21616748 | Msa1145100:intron | 10.0% |
| !!! | TTTTTGTATGAAATTTTTGA+GGG | - | chr7_4:21613066-21613085 | None:intergenic | 15.0% |
| !!! | TTTTTTGTATGAAATTTTTG+AGG | - | chr7_4:21613067-21613086 | None:intergenic | 15.0% |
| !!! | TTAAGAATTTTTGTTTGTTT+TGG | - | chr7_4:21613093-21613112 | None:intergenic | 15.0% |
| !!! | ATTCTTAATTTTCACTTTTA+AGG | + | chr7_4:21613105-21613124 | Msa1145100:five_prime_UTR | 15.0% |
| !! | ATTAGATGAAAATTTCAAAA+GGG | - | chr7_4:21613174-21613193 | None:intergenic | 15.0% |
| !! | AATTAGATGAAAATTTCAAA+AGG | - | chr7_4:21613175-21613194 | None:intergenic | 15.0% |
| !!! | GACAAAAAATTGTTTTTTTA+AGG | + | chr7_4:21613197-21613216 | Msa1145100:intron | 15.0% |
| !!! | CTTTGTTTTTTAATGATTAT+TGG | + | chr7_4:21613267-21613286 | Msa1145100:intron | 15.0% |
| !!! | TTGATTTTGTAATTAAGTTA+AGG | + | chr7_4:21613312-21613331 | Msa1145100:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | - | chr7_4:21613652-21613671 | None:intergenic | 15.0% |
| !!! | TAAAATTAACTCTTTTCTAA+TGG | + | chr7_4:21613825-21613844 | Msa1145100:intron | 15.0% |
| !!! | AAAATTAACTCTTTTCTAAT+GGG | + | chr7_4:21613826-21613845 | Msa1145100:intron | 15.0% |
| !!! | AAAAATGTGCTATTTATATT+TGG | + | chr7_4:21614288-21614307 | Msa1145100:intron | 15.0% |
| !!! | TGGAATTTAATTTTATTGAA+AGG | + | chr7_4:21614968-21614987 | Msa1145100:intron | 15.0% |
| !!! | TTTTATGCACAAAATATATT+GGG | - | chr7_4:21615274-21615293 | None:intergenic | 15.0% |
| !!! | TTTTTATGCACAAAATATAT+TGG | - | chr7_4:21615275-21615294 | None:intergenic | 15.0% |
| !!! | TAGTTACTTATATCTTTTTA+AGG | + | chr7_4:21616334-21616353 | Msa1145100:intron | 15.0% |
| !!! | AGTTACTTATATCTTTTTAA+GGG | + | chr7_4:21616335-21616354 | Msa1145100:intron | 15.0% |
| !! | GGTAAAAATATAAAATTACA+TGG | - | chr7_4:21616681-21616700 | None:intergenic | 15.0% |
| !! | TCAGAAAATATATTTAAAAG+AGG | + | chr7_4:21617431-21617450 | Msa1145100:three_prime_UTR | 15.0% |
| !!! | GTGATTTTAAAGAAGTATTA+CGG | - | chr7_4:21613139-21613158 | None:intergenic | 20.0% |
| !!! | TGATGTTTTTATAACCTAAT+TGG | + | chr7_4:21613237-21613256 | Msa1145100:intron | 20.0% |
| !! | AACAAAGAAAAAAACCAATT+AGG | - | chr7_4:21613254-21613273 | None:intergenic | 20.0% |
| !!! | TTGTAATTAAGTTAAGGTTT+TGG | + | chr7_4:21613318-21613337 | Msa1145100:intron | 20.0% |
| !! | TATACAAATTAAGAGTGAAT+AGG | + | chr7_4:21613391-21613410 | Msa1145100:five_prime_UTR | 20.0% |
| !!! | AAATTAACTCTTTTCTAATG+GGG | + | chr7_4:21613827-21613846 | Msa1145100:intron | 20.0% |
| !! | TTTATGCACAAAATATATTG+GGG | - | chr7_4:21615273-21615292 | None:intergenic | 20.0% |
| !! | TGTGCATAAAAATAAAAATG+AGG | + | chr7_4:21615283-21615302 | Msa1145100:intron | 20.0% |
| !! | AAAAAGATATAAGTAACTAC+TGG | - | chr7_4:21616333-21616352 | None:intergenic | 20.0% |
| !!! | TGAGTTTTTAAAATTCAAAC+TGG | + | chr7_4:21616359-21616378 | Msa1145100:intron | 20.0% |
| !! | AATATAAGCAATACTATCTT+GGG | - | chr7_4:21616604-21616623 | None:intergenic | 20.0% |
| !!! | ATTTTCTTGGTTTTGTATTA+TGG | + | chr7_4:21617020-21617039 | Msa1145100:intron | 20.0% |
| !! | TGTAATAAGGGGTATAAAAA+GGG | - | chr7_4:21612956-21612975 | None:intergenic | 25.0% |
| !! | TTGTAATAAGGGGTATAAAA+AGG | - | chr7_4:21612957-21612976 | None:intergenic | 25.0% |
| ! | AAGTGAGAATTTGTAATAAG+GGG | - | chr7_4:21612967-21612986 | None:intergenic | 25.0% |
| ! | GAAGTGAGAATTTGTAATAA+GGG | - | chr7_4:21612968-21612987 | None:intergenic | 25.0% |
| ! | TGAAGTGAGAATTTGTAATA+AGG | - | chr7_4:21612969-21612988 | None:intergenic | 25.0% |
| ! | TTCTTTATTACAAATGAGCA+TGG | - | chr7_4:21613583-21613602 | None:intergenic | 25.0% |
| !! | TAAAGAGACAAGCTAAATTT+TGG | - | chr7_4:21613863-21613882 | None:intergenic | 25.0% |
| !!! | ATACGAGTTTGTTGATAATT+CGG | + | chr7_4:21613892-21613911 | Msa1145100:intron | 25.0% |
| ! | CGTTGGTATAAAACTTTATT+GGG | - | chr7_4:21614039-21614058 | None:intergenic | 25.0% |
| ! | TCGTTGGTATAAAACTTTAT+TGG | - | chr7_4:21614040-21614059 | None:intergenic | 25.0% |
| ! | GTTTGTATCAATAGTAATAC+TGG | - | chr7_4:21614542-21614561 | None:intergenic | 25.0% |
| ! | TTAAATGACTCCAAAATTCT+AGG | - | chr7_4:21614900-21614919 | None:intergenic | 25.0% |
| ! | AGAAAAAGCAGTAAACAATT+TGG | - | chr7_4:21615332-21615351 | None:intergenic | 25.0% |
| ! | CAAAAACAAGCTAAGATTAA+TGG | - | chr7_4:21615591-21615610 | None:intergenic | 25.0% |
| !! | TTTAAGATTCAGAACATTGT+CGG | + | chr7_4:21615921-21615940 | Msa1145100:CDS | 25.0% |
| !!! | AAATTGTAGTGGCTATTTTA+AGG | - | chr7_4:21616303-21616322 | None:intergenic | 25.0% |
| ! | CTGGAAAAAAAAAATTGTAG+TGG | - | chr7_4:21616314-21616333 | None:intergenic | 25.0% |
| !!! | TTTTAAAATTCAAACTGGAG+TGG | + | chr7_4:21616364-21616383 | Msa1145100:intron | 25.0% |
| !! | TTTAAAATTCAAACTGGAGT+GGG | + | chr7_4:21616365-21616384 | Msa1145100:intron | 25.0% |
| ! | GAATATAAGCAATACTATCT+TGG | - | chr7_4:21616605-21616624 | None:intergenic | 25.0% |
| ! | TATTGCTTATATTCGTATCT+GGG | + | chr7_4:21616611-21616630 | Msa1145100:CDS | 25.0% |
| ! | AAAACATTAGTAGTACAATG+AGG | - | chr7_4:21616713-21616732 | None:intergenic | 25.0% |
| ! | GATATACATGTTGTAATTAC+TGG | + | chr7_4:21616869-21616888 | Msa1145100:intron | 25.0% |
| ! | AAGCAAAACAAAAGACAAAA+TGG | - | chr7_4:21616917-21616936 | None:intergenic | 25.0% |
| ! | TATCATGAGATACGTATTAT+TGG | + | chr7_4:21617220-21617239 | Msa1145100:intron | 25.0% |
| ! | ATATTGAGACAGAAGATATT+TGG | + | chr7_4:21617318-21617337 | Msa1145100:three_prime_UTR | 25.0% |
| ! | ATATTTAAAAGAGGCTGAAA+AGG | + | chr7_4:21617440-21617459 | Msa1145100:three_prime_UTR | 25.0% |
| ! | AAGAACCCTACTTAAAATTA+AGG | - | chr7_4:21617532-21617551 | None:intergenic | 25.0% |
| AATGAAGGTAAAAACAGGTT+GGG | - | chr7_4:21612844-21612863 | None:intergenic | 30.0% | |
| GAAATTGGAGTTGAAATGAA+GGG | - | chr7_4:21613035-21613054 | None:intergenic | 30.0% | |
| AGAAATTGGAGTTGAAATGA+AGG | - | chr7_4:21613036-21613055 | None:intergenic | 30.0% | |
| !! | TTCAAAAGGGTATTTAGATC+TGG | - | chr7_4:21613161-21613180 | None:intergenic | 30.0% |
| TTATTGGATGATTAGAGATC+TGG | + | chr7_4:21613283-21613302 | Msa1145100:intron | 30.0% | |
| TATTGGATGATTAGAGATCT+GGG | + | chr7_4:21613284-21613303 | Msa1145100:intron | 30.0% | |
| !! | GTACTGATTAATGTGGAATA+TGG | + | chr7_4:21613340-21613359 | Msa1145100:intron | 30.0% |
| !! | CTGGTTTGGATAACTAAATA+AGG | - | chr7_4:21613750-21613769 | None:intergenic | 30.0% |
| TACTCTCAATATCATACATG+GGG | - | chr7_4:21613785-21613804 | None:intergenic | 30.0% | |
| GTACTCTCAATATCATACAT+GGG | - | chr7_4:21613786-21613805 | None:intergenic | 30.0% | |
| AGTACTCTCAATATCATACA+TGG | - | chr7_4:21613787-21613806 | None:intergenic | 30.0% | |
| AATTGACAAATACGGAAAAC+AGG | - | chr7_4:21613962-21613981 | None:intergenic | 30.0% | |
| ! | ACTGATAACTGCTCTTTTTA+AGG | + | chr7_4:21614009-21614028 | Msa1145100:intron | 30.0% |
| ! | CTGATAACTGCTCTTTTTAA+GGG | + | chr7_4:21614010-21614029 | Msa1145100:intron | 30.0% |
| !! | TGATAACTGCTCTTTTTAAG+GGG | + | chr7_4:21614011-21614030 | Msa1145100:intron | 30.0% |
| !! | GAGAGTATTTATATTCCAGT+TGG | + | chr7_4:21614103-21614122 | Msa1145100:intron | 30.0% |
| TATTGTGTCAACTGTCAATT+TGG | + | chr7_4:21614317-21614336 | Msa1145100:intron | 30.0% | |
| TGAAAAACAAAACTTGCCTT+GGG | - | chr7_4:21614399-21614418 | None:intergenic | 30.0% | |
| TTGAAAAACAAAACTTGCCT+TGG | - | chr7_4:21614400-21614419 | None:intergenic | 30.0% | |
| !! | ACTTGGTTTTTGTTTAGTTG+TGG | + | chr7_4:21614485-21614504 | Msa1145100:intron | 30.0% |
| !! | TTTTGTTTAGTTGTGGAGTT+TGG | + | chr7_4:21614492-21614511 | Msa1145100:intron | 30.0% |
| ! | AAAAAAGTGTAGTGCATAAG+TGG | - | chr7_4:21614564-21614583 | None:intergenic | 30.0% |
| !! | AAAATAAGTGCCGTTGTTTT+TGG | - | chr7_4:21614731-21614750 | None:intergenic | 30.0% |
| ! | TTGTACTTGGTTGTTTGTTT+TGG | + | chr7_4:21614841-21614860 | Msa1145100:intron | 30.0% |
| TGAAAGGACTGTAATGATTA+TGG | + | chr7_4:21614984-21615003 | Msa1145100:intron | 30.0% | |
| TAATGATTATGGTCAGAGAT+AGG | + | chr7_4:21614995-21615014 | Msa1145100:intron | 30.0% | |
| GCATAGATACTATGTTAAGA+GGG | + | chr7_4:21615234-21615253 | Msa1145100:intron | 30.0% | |
| ! | ACTATGTTAAGAGGGTATAA+TGG | + | chr7_4:21615242-21615261 | Msa1145100:intron | 30.0% |
| !!! | ATTGTTTACTGCTTTTTCTG+AGG | + | chr7_4:21615333-21615352 | Msa1145100:intron | 30.0% |
| !!! | TTGTTTACTGCTTTTTCTGA+GGG | + | chr7_4:21615334-21615353 | Msa1145100:intron | 30.0% |
| ! | TTTAAGCATGTTGCTTGTTA+TGG | + | chr7_4:21615388-21615407 | Msa1145100:intron | 30.0% |
| !! | TTAAGCATGTTGCTTGTTAT+GGG | + | chr7_4:21615389-21615408 | Msa1145100:intron | 30.0% |
| !!! | AATGCTTTTTTGATTGCCAT+TGG | + | chr7_4:21615420-21615439 | Msa1145100:intron | 30.0% |
| GAGAAACTTCAATAGTACAA+AGG | - | chr7_4:21615537-21615556 | None:intergenic | 30.0% | |
| CTTAAACCAGCAATGATATT+TGG | + | chr7_4:21615645-21615664 | Msa1145100:intron | 30.0% | |
| TAATTCTAGCATACTGAACA+AGG | - | chr7_4:21615737-21615756 | None:intergenic | 30.0% | |
| AAGTAGTACCTTAAACTTAG+CGG | - | chr7_4:21615778-21615797 | None:intergenic | 30.0% | |
| ! | TTCCTTTTGTATTGTGCTTT+AGG | + | chr7_4:21615896-21615915 | Msa1145100:intron | 30.0% |
| ATCCTAAAGCACAATACAAA+AGG | - | chr7_4:21615901-21615920 | None:intergenic | 30.0% | |
| ACTTCAGGTATATAATCCAA+GGG | - | chr7_4:21616119-21616138 | None:intergenic | 30.0% | |
| TCTGTAAAATACTAGACTTC+AGG | - | chr7_4:21616134-21616153 | None:intergenic | 30.0% | |
| AATCTGGATTTGTGATTGTT+TGG | - | chr7_4:21616247-21616266 | None:intergenic | 30.0% | |
| TTAAAATTCAAACTGGAGTG+GGG | + | chr7_4:21616366-21616385 | Msa1145100:intron | 30.0% | |
| GGTACATGTATAGATATTGA+TGG | + | chr7_4:21616417-21616436 | Msa1145100:intron | 30.0% | |
| ATGTATAGATATTGATGGAG+AGG | + | chr7_4:21616422-21616441 | Msa1145100:intron | 30.0% | |
| TGTATAGATATTGATGGAGA+GGG | + | chr7_4:21616423-21616442 | Msa1145100:intron | 30.0% | |
| GTATTGCTTATATTCGTATC+TGG | + | chr7_4:21616610-21616629 | Msa1145100:CDS | 30.0% | |
| ! | ATATCCACTACCTTTTCAAT+TGG | + | chr7_4:21616841-21616860 | Msa1145100:intron | 30.0% |
| ATATCCAATGCCAATTGAAA+AGG | - | chr7_4:21616854-21616873 | None:intergenic | 30.0% | |
| ATGTTGTAATTACTGGACTA+GGG | + | chr7_4:21616876-21616895 | Msa1145100:intron | 30.0% | |
| TCGTAGTTTAATCCAACATT+CGG | + | chr7_4:21617116-21617135 | Msa1145100:intron | 30.0% | |
| !! | TGGCTACCTTAATTTTAAGT+AGG | + | chr7_4:21617523-21617542 | Msa1145100:three_prime_UTR | 30.0% |
| !! | GGCTACCTTAATTTTAAGTA+GGG | + | chr7_4:21617524-21617543 | Msa1145100:three_prime_UTR | 30.0% |
| ATGAAGGTAAAAACAGGTTG+GGG | - | chr7_4:21612843-21612862 | None:intergenic | 35.0% | |
| GAATGAAGGTAAAAACAGGT+TGG | - | chr7_4:21612845-21612864 | None:intergenic | 35.0% | |
| GAGAGAATGAAGGTAAAAAC+AGG | - | chr7_4:21612849-21612868 | None:intergenic | 35.0% | |
| CTGTTGGATTATGAAGATAG+AGG | - | chr7_4:21612873-21612892 | None:intergenic | 35.0% | |
| !! | AGAAGAAATGATGGATCTGT+TGG | - | chr7_4:21612889-21612908 | None:intergenic | 35.0% |
| GATTGGAAGAGAAGAAATGA+TGG | - | chr7_4:21612898-21612917 | None:intergenic | 35.0% | |
| ! | TGAATGAAGAAGAGTGTGTT+TGG | - | chr7_4:21613009-21613028 | None:intergenic | 35.0% |
| !!! | GGTTTTGGTACTGATTAATG+TGG | + | chr7_4:21613333-21613352 | Msa1145100:intron | 35.0% |
| CTGATTAATGTGGAATATGG+TGG | + | chr7_4:21613343-21613362 | Msa1145100:intron | 35.0% | |
| TAAGAGTGAATAGGAGCTTA+TGG | + | chr7_4:21613400-21613419 | Msa1145100:exon | 35.0% | |
| AAAGAAACTCACTGAAGAGT+AGG | - | chr7_4:21613488-21613507 | None:intergenic | 35.0% | |
| AAGCATGAGAAGATAATCTG+AGG | + | chr7_4:21613533-21613552 | Msa1145100:intron | 35.0% | |
| GTATAGATATGCCTTTGATG+TGG | + | chr7_4:21613724-21613743 | Msa1145100:intron | 35.0% | |
| ACTAAATAAGGCCACATCAA+AGG | - | chr7_4:21613738-21613757 | None:intergenic | 35.0% | |
| !! | TTTAGCTTGTCTCTTTAGCT+TGG | + | chr7_4:21613866-21613885 | Msa1145100:intron | 35.0% |
| TTTCCGTATTTGTCAATTGC+TGG | + | chr7_4:21613964-21613983 | Msa1145100:intron | 35.0% | |
| GAAGCTTAGTGAATGAGATT+TGG | + | chr7_4:21614058-21614077 | Msa1145100:intron | 35.0% | |
| ATTCCAGTTGGAATTACTTG+TGG | + | chr7_4:21614115-21614134 | Msa1145100:intron | 35.0% | |
| TGTCAATTTGGACTGTAAGT+TGG | + | chr7_4:21614329-21614348 | Msa1145100:intron | 35.0% | |
| AATTCCAATGAAGGTTGACT+TGG | + | chr7_4:21614468-21614487 | Msa1145100:intron | 35.0% | |
| AAAACCAAGTCAACCTTCAT+TGG | - | chr7_4:21614475-21614494 | None:intergenic | 35.0% | |
| TTTCACAACCAACTTGTACT+TGG | + | chr7_4:21614828-21614847 | Msa1145100:intron | 35.0% | |
| ACAAACAACCAAGTACAAGT+TGG | - | chr7_4:21614839-21614858 | None:intergenic | 35.0% | |
| !!! | TACTTGGTTGTTTGTTTTGG+TGG | + | chr7_4:21614844-21614863 | Msa1145100:intron | 35.0% |
| ! | CAAGAGTTGTCCTAGAATTT+TGG | + | chr7_4:21614887-21614906 | Msa1145100:intron | 35.0% |
| AGAATGGACGGAAGAAAAAA+AGG | + | chr7_4:21615198-21615217 | Msa1145100:intron | 35.0% | |
| CTTAACATAGTATCTATGCC+TGG | - | chr7_4:21615233-21615252 | None:intergenic | 35.0% | |
| GGCATAGATACTATGTTAAG+AGG | + | chr7_4:21615233-21615252 | Msa1145100:intron | 35.0% | |
| !!! | CTTTTTTGATTGCCATTGGT+AGG | + | chr7_4:21615424-21615443 | Msa1145100:intron | 35.0% |
| TATTGAAGTTTCTCAAGTCG+AGG | + | chr7_4:21615543-21615562 | Msa1145100:intron | 35.0% | |
| ACAAGCTAAGATTAATGGCA+AGG | - | chr7_4:21615586-21615605 | None:intergenic | 35.0% | |
| GTTTAGCCAAATATCATTGC+TGG | - | chr7_4:21615654-21615673 | None:intergenic | 35.0% | |
| TGCTAGAATTATCCAGAAAC+TGG | + | chr7_4:21615746-21615765 | Msa1145100:CDS | 35.0% | |
| GCTAGAATTATCCAGAAACT+GGG | + | chr7_4:21615747-21615766 | Msa1145100:CDS | 35.0% | |
| AGTAGTACCTTAAACTTAGC+GGG | - | chr7_4:21615777-21615796 | None:intergenic | 35.0% | |
| TTATTTCCTCAAATTCGCCA+GGG | - | chr7_4:21616048-21616067 | None:intergenic | 35.0% | |
| ATTATTTCCTCAAATTCGCC+AGG | - | chr7_4:21616049-21616068 | None:intergenic | 35.0% | |
| CTTCAGGTATATAATCCAAG+GGG | - | chr7_4:21616118-21616137 | None:intergenic | 35.0% | |
| GACTTCAGGTATATAATCCA+AGG | - | chr7_4:21616120-21616139 | None:intergenic | 35.0% | |
| ! | AGTATCTAAAGTGTGCACTA+TGG | + | chr7_4:21616179-21616198 | Msa1145100:intron | 35.0% |
| ! | TTCATTCGATAGATTAGTCC+TGG | - | chr7_4:21616577-21616596 | None:intergenic | 35.0% |
| AGTACAATGAGGCAGAAAAA+TGG | - | chr7_4:21616702-21616721 | None:intergenic | 35.0% | |
| CACTGGATATATGTTCTCAA+AGG | - | chr7_4:21616776-21616795 | None:intergenic | 35.0% | |
| AGTTCAGGAAAAACCAACAA+TGG | + | chr7_4:21616803-21616822 | Msa1145100:intron | 35.0% | |
| AATGCCAATTGAAAAGGTAG+TGG | - | chr7_4:21616848-21616867 | None:intergenic | 35.0% | |
| ! | ACTACCTTTTCAATTGGCAT+TGG | + | chr7_4:21616847-21616866 | Msa1145100:intron | 35.0% |
| CATGTTGTAATTACTGGACT+AGG | + | chr7_4:21616875-21616894 | Msa1145100:intron | 35.0% | |
| ! | TGAACTAGTCAGCATTTTCT+TGG | + | chr7_4:21617007-21617026 | Msa1145100:intron | 35.0% |
| TTGGATTAAACTACGACTGA+GGG | - | chr7_4:21617112-21617131 | None:intergenic | 35.0% | |
| TTAATCCAACATTCGGCATT+TGG | + | chr7_4:21617123-21617142 | Msa1145100:intron | 35.0% | |
| ACATCAAAATGGGTCCTTTA+AGG | - | chr7_4:21617167-21617186 | None:intergenic | 35.0% | |
| !! | ACCCATTTTGATGTGACAAT+GGG | + | chr7_4:21617173-21617192 | Msa1145100:intron | 35.0% |
| ACCCATTGTCACATCAAAAT+GGG | - | chr7_4:21617177-21617196 | None:intergenic | 35.0% | |
| TACCCATTGTCACATCAAAA+TGG | - | chr7_4:21617178-21617197 | None:intergenic | 35.0% | |
| TATCATCATGAGTAAGAGCA+AGG | + | chr7_4:21617248-21617267 | Msa1145100:CDS | 35.0% | |
| ! | TGATTTTGTTCTGCTTGTGA+TGG | + | chr7_4:21617358-21617377 | Msa1145100:three_prime_UTR | 35.0% |
| ! | TTGAGTCCTTTTACTGTTGT+TGG | + | chr7_4:21617503-21617522 | Msa1145100:three_prime_UTR | 35.0% |
| AGATAGAGGAGAGAGAATGA+AGG | - | chr7_4:21612859-21612878 | None:intergenic | 40.0% | |
| AGAGAGATTGTGAATGCGAT+TGG | - | chr7_4:21612915-21612934 | None:intergenic | 40.0% | |
| TTGAGGGATCTGAGAGAAAT+TGG | - | chr7_4:21613050-21613069 | None:intergenic | 40.0% | |
| ! | GATCTATCAAAGCATCCTTC+TGG | + | chr7_4:21613455-21613474 | Msa1145100:CDS | 40.0% |
| CACATGTATCTGTGTCGTAT+TGG | + | chr7_4:21613688-21613707 | Msa1145100:intron | 40.0% | |
| ! | TATCTGTGTCGTATTGGTGT+CGG | + | chr7_4:21613694-21613713 | Msa1145100:intron | 40.0% |
| GCATGTGACTTTCCTATACA+TGG | + | chr7_4:21613931-21613950 | Msa1145100:intron | 40.0% | |
| AAACAGGACTGACCATGTAT+AGG | - | chr7_4:21613946-21613965 | None:intergenic | 40.0% | |
| GCTCCAGCAATTGACAAATA+CGG | - | chr7_4:21613970-21613989 | None:intergenic | 40.0% | |
| TCTCATTCACTAAGCTTCGT+TGG | - | chr7_4:21614056-21614075 | None:intergenic | 40.0% | |
| ACACCACAAGTAATTCCAAC+TGG | - | chr7_4:21614121-21614140 | None:intergenic | 40.0% | |
| ! | CTTGTGGTGTATTCTTTTCC+AGG | + | chr7_4:21614131-21614150 | Msa1145100:intron | 40.0% |
| CACACACAAGAACATAAACC+TGG | - | chr7_4:21614152-21614171 | None:intergenic | 40.0% | |
| TAATGCAGAGTACAATCCCA+AGG | + | chr7_4:21614380-21614399 | Msa1145100:intron | 40.0% | |
| TTGCACCACAATTCCAATGA+AGG | + | chr7_4:21614459-21614478 | Msa1145100:intron | 40.0% | |
| GTCAACCTTCATTGGAATTG+TGG | - | chr7_4:21614467-21614486 | None:intergenic | 40.0% | |
| GAAATCAGCACTGCAGAAAA+AGG | - | chr7_4:21614655-21614674 | None:intergenic | 40.0% | |
| ! | GTTTTGCTGCTGTGATTATG+AGG | + | chr7_4:21614696-21614715 | Msa1145100:CDS | 40.0% |
| !!! | ACGGCACTTATTTTTGCATC+CGG | + | chr7_4:21614737-21614756 | Msa1145100:CDS | 40.0% |
| !! | TATTTTTGCATCCGGCAAGA+TGG | + | chr7_4:21614745-21614764 | Msa1145100:CDS | 40.0% |
| AAAAGAACGTACCATCTTGC+CGG | - | chr7_4:21614759-21614778 | None:intergenic | 40.0% | |
| TTGTGATACAGGCCTTGATT+GGG | - | chr7_4:21614870-21614889 | None:intergenic | 40.0% | |
| TAGGACAACTCTTGTGATAC+AGG | - | chr7_4:21614881-21614900 | None:intergenic | 40.0% | |
| TTGGAGTCATTTAACCACTG+CGG | + | chr7_4:21614906-21614925 | Msa1145100:intron | 40.0% | |
| ! | CGTTGACTAAATCTCCATTC+GGG | - | chr7_4:21615044-21615063 | None:intergenic | 40.0% |
| !! | GCGTTGACTAAATCTCCATT+CGG | - | chr7_4:21615045-21615064 | None:intergenic | 40.0% |
| GGAGATTTAGTCAACGCATA+TGG | + | chr7_4:21615048-21615067 | Msa1145100:intron | 40.0% | |
| ATTGACCATCTAGCACTATG+AGG | - | chr7_4:21615097-21615116 | None:intergenic | 40.0% | |
| ATAGTGCTAGATGGTCAATG+AGG | + | chr7_4:21615098-21615117 | Msa1145100:intron | 40.0% | |
| TAGTGCTAGATGGTCAATGA+GGG | + | chr7_4:21615099-21615118 | Msa1145100:intron | 40.0% | |
| ATCACATATCTACAGATCCG+AGG | - | chr7_4:21615153-21615172 | None:intergenic | 40.0% | |
| TCGGATCTGTAGATATGTGA+TGG | + | chr7_4:21615152-21615171 | Msa1145100:intron | 40.0% | |
| !! | TATGTGATGGACGAATGCAA+AGG | + | chr7_4:21615165-21615184 | Msa1145100:intron | 40.0% |
| !! | ATGTGATGGACGAATGCAAA+GGG | + | chr7_4:21615166-21615185 | Msa1145100:intron | 40.0% |
| !! | AAAAAAAGGTGTCTCTTGCC+AGG | + | chr7_4:21615212-21615231 | Msa1145100:intron | 40.0% |
| !! | CATTGCACAAGTACTGATAG+AGG | - | chr7_4:21615360-21615379 | None:intergenic | 40.0% |
| GAGTGAGGTGCAATCAAAAT+TGG | + | chr7_4:21615463-21615482 | Msa1145100:CDS | 40.0% | |
| TGCAATCAAAATTGGCAGCA+AGG | + | chr7_4:21615471-21615490 | Msa1145100:CDS | 40.0% | |
| ATCAAAATTGGCAGCAAGGA+AGG | + | chr7_4:21615475-21615494 | Msa1145100:CDS | 40.0% | |
| GTAGTACCTTAAACTTAGCG+GGG | - | chr7_4:21615776-21615795 | None:intergenic | 40.0% | |
| CTATTGCTTTCTATTTCCCC+TGG | + | chr7_4:21616028-21616047 | Msa1145100:intron | 40.0% | |
| TATTTCCTCAAATTCGCCAG+GGG | - | chr7_4:21616047-21616066 | None:intergenic | 40.0% | |
| TTGTGATTGTTTGGCTGTCA+TGG | - | chr7_4:21616238-21616257 | None:intergenic | 40.0% | |
| TCAGTCACAATGCTTGTGTA+TGG | + | chr7_4:21616396-21616415 | Msa1145100:intron | 40.0% | |
| ! | ATGTTGAACTTGCTTGTTCC+TGG | + | chr7_4:21616527-21616546 | Msa1145100:intron | 40.0% |
| ! | TATGAACCAGAGTTGTTTCC+AGG | + | chr7_4:21616556-21616575 | Msa1145100:CDS | 40.0% |
| ATTAGTCCTGGAAACAACTC+TGG | - | chr7_4:21616565-21616584 | None:intergenic | 40.0% | |
| TCTGGGAAAATTGTTCTGAC+AGG | + | chr7_4:21616628-21616647 | Msa1145100:CDS | 40.0% | |
| GTATCACAAGACCAATACCT+TGG | - | chr7_4:21616656-21616675 | None:intergenic | 40.0% | |
| AACCAACAATGGTATGCACA+TGG | + | chr7_4:21616814-21616833 | Msa1145100:intron | 40.0% | |
| ! | AAGCTGACAGTTGATGTTGA+TGG | - | chr7_4:21616944-21616963 | None:intergenic | 40.0% |
| AGCTCAGTCCAATCAAATGT+TGG | + | chr7_4:21617055-21617074 | Msa1145100:intron | 40.0% | |
| ! | TCCAATCAAATGTTGGCTGT+TGG | + | chr7_4:21617062-21617081 | Msa1145100:intron | 40.0% |
| TCCAACAGCCAACATTTGAT+TGG | - | chr7_4:21617066-21617085 | None:intergenic | 40.0% | |
| ! | AATGTTGGCTGTTGGATTAG+CGG | + | chr7_4:21617070-21617089 | Msa1145100:intron | 40.0% |
| GTTGGATTAAACTACGACTG+AGG | - | chr7_4:21617113-21617132 | None:intergenic | 40.0% | |
| !! | GACCCATTTTGATGTGACAA+TGG | + | chr7_4:21617172-21617191 | Msa1145100:intron | 40.0% |
| ! | TGAGTAAGAGCAAGGTTTTC+TGG | + | chr7_4:21617256-21617275 | Msa1145100:CDS | 40.0% |
| AGGTAGCCAACAACAGTAAA+AGG | - | chr7_4:21617512-21617531 | None:intergenic | 40.0% | |
| ! | AAGAGTGTGTTTGGAGAGAG+CGG | - | chr7_4:21613000-21613019 | None:intergenic | 45.0% |
| GCTTTGATAGATCCACAGGT+TGG | - | chr7_4:21613448-21613467 | None:intergenic | 45.0% | |
| GGATGCTTTGATAGATCCAC+AGG | - | chr7_4:21613452-21613471 | None:intergenic | 45.0% | |
| AGAGTAGGCACAATTCCAGA+AGG | - | chr7_4:21613473-21613492 | None:intergenic | 45.0% | |
| GGCATCACTAATAGCTGGTT+TGG | - | chr7_4:21613764-21613783 | None:intergenic | 45.0% | |
| GCTGGAGCATACAGTTTGAT+TGG | + | chr7_4:21613982-21614001 | Msa1145100:intron | 45.0% | |
| TATGCTCAATGTGCTTGACG+CGG | + | chr7_4:21614215-21614234 | Msa1145100:intron | 45.0% | |
| CTGCTGTGATTATGAGGATC+CGG | + | chr7_4:21614702-21614721 | Msa1145100:CDS | 45.0% | |
| TGCTGTGATTATGAGGATCC+GGG | + | chr7_4:21614703-21614722 | Msa1145100:CDS | 45.0% | |
| !!! | TTGTTTTGGTGGCCCAATCA+AGG | + | chr7_4:21614855-21614874 | Msa1145100:intron | 45.0% |
| CTTGTGATACAGGCCTTGAT+TGG | - | chr7_4:21614871-21614890 | None:intergenic | 45.0% | |
| TGGAGTCATTTAACCACTGC+GGG | + | chr7_4:21614907-21614926 | Msa1145100:intron | 45.0% | |
| TAGCTGAGAAGGTGATGTGA+TGG | + | chr7_4:21614935-21614954 | Msa1145100:intron | 45.0% | |
| ! | ATGGTTGTGTTGCTCTAGTG+AGG | + | chr7_4:21615067-21615086 | Msa1145100:intron | 45.0% |
| GTAGGAGGTGAAATGAACCT+CGG | + | chr7_4:21615133-21615152 | Msa1145100:intron | 45.0% | |
| !! | TGTGATGGACGAATGCAAAG+GGG | + | chr7_4:21615167-21615186 | Msa1145100:intron | 45.0% |
| CAAAGGGGAGAGAAACAGAA+TGG | + | chr7_4:21615182-21615201 | Msa1145100:intron | 45.0% | |
| GTGATGTCAAGTTCCCCATA+CGG | + | chr7_4:21615949-21615968 | Msa1145100:CDS | 45.0% | |
| !! | TACACTTGAGAAAGCACCGT+GGG | - | chr7_4:21615994-21616013 | None:intergenic | 45.0% |
| !! | TTACACTTGAGAAAGCACCG+TGG | - | chr7_4:21615995-21616014 | None:intergenic | 45.0% |
| TATTTCCCCTGGCGAATTTG+AGG | + | chr7_4:21616039-21616058 | Msa1145100:intron | 45.0% | |
| ! | CTCTGGTTCATACTATCACC+AGG | - | chr7_4:21616548-21616567 | None:intergenic | 45.0% |
| AATTGTTCTGACAGGAGCCA+AGG | + | chr7_4:21616636-21616655 | Msa1145100:CDS | 45.0% | |
| ATCCAGTGCTTACTGAGTTC+AGG | + | chr7_4:21616788-21616807 | Msa1145100:intron | 45.0% | |
| TTCCTGAACTCAGTAAGCAC+TGG | - | chr7_4:21616793-21616812 | None:intergenic | 45.0% | |
| AGCCATGTGCATACCATTGT+TGG | - | chr7_4:21616819-21616838 | None:intergenic | 45.0% | |
| TTTGATTGGACTGAGCTGCA+AGG | - | chr7_4:21617052-21617071 | None:intergenic | 45.0% | |
| TCTAGCCAAATGCCGAATGT+TGG | - | chr7_4:21617131-21617150 | None:intergenic | 45.0% | |
| TTTGGCTAGACTGATCTGGT+TGG | + | chr7_4:21617141-21617160 | Msa1145100:intron | 45.0% | |
| !! | ACTGATCTGGTTGGCCTTAA+AGG | + | chr7_4:21617150-21617169 | Msa1145100:intron | 45.0% |
| AGAGTGTGTTTGGAGAGAGC+GGG | - | chr7_4:21612999-21613018 | None:intergenic | 50.0% | |
| TAGGAGCTTATGGCTGACCA+AGG | + | chr7_4:21613410-21613429 | Msa1145100:exon | 50.0% | |
| GCTTATGGCTGACCAAGGAT+TGG | + | chr7_4:21613415-21613434 | Msa1145100:exon | 50.0% | |
| ATGGCTGACCAAGGATTGGA+AGG | + | chr7_4:21613419-21613438 | Msa1145100:CDS | 50.0% | |
| TGGCTGACCAAGGATTGGAA+GGG | + | chr7_4:21613420-21613439 | Msa1145100:CDS | 50.0% | |
| ! | CATGGGGCATCACTAATAGC+TGG | - | chr7_4:21613769-21613788 | None:intergenic | 50.0% |
| GTTGTGGAGTTTGGTCTCCT+TGG | + | chr7_4:21614501-21614520 | Msa1145100:intron | 50.0% | |
| GGTCGATAGAAAGACTGCCA+AGG | - | chr7_4:21614521-21614540 | None:intergenic | 50.0% | |
| GATCCGGGAGCCAAAAACAA+CGG | + | chr7_4:21614718-21614737 | Msa1145100:CDS | 50.0% | |
| GGAGTCATTTAACCACTGCG+GGG | + | chr7_4:21614908-21614927 | Msa1145100:intron | 50.0% | |
| TGAGAAGGTGATGTGATGGC+TGG | + | chr7_4:21614939-21614958 | Msa1145100:intron | 50.0% | |
| GAGAAGGTGATGTGATGGCT+GGG | + | chr7_4:21614940-21614959 | Msa1145100:intron | 50.0% | |
| AGAAGGTGATGTGATGGCTG+GGG | + | chr7_4:21614941-21614960 | Msa1145100:intron | 50.0% | |
| TGCTAGATGGTCAATGAGGG+TGG | + | chr7_4:21615102-21615121 | Msa1145100:intron | 50.0% | |
| GGGGAGAGAAACAGAATGGA+CGG | + | chr7_4:21615186-21615205 | Msa1145100:intron | 50.0% | |
| TGCCATTGGTAGGTCTGTAC+TGG | + | chr7_4:21615434-21615453 | Msa1145100:intron | 50.0% | |
| CTCCAGTACAGACCTACCAA+TGG | - | chr7_4:21615439-21615458 | None:intergenic | 50.0% | |
| CTGTACTGGAGCTAAGAGTG+AGG | + | chr7_4:21615448-21615467 | Msa1145100:CDS | 50.0% | |
| CAAGTCGAGGTTCAGTAGAC+TGG | + | chr7_4:21615556-21615575 | Msa1145100:intron | 50.0% | |
| AGCACCACTCATGTAGCGTT+GGG | - | chr7_4:21615862-21615881 | None:intergenic | 50.0% | |
| AAGCACCACTCATGTAGCGT+TGG | - | chr7_4:21615863-21615882 | None:intergenic | 50.0% | |
| GAGGGTCTTGCATATTCCCA+CGG | + | chr7_4:21615975-21615994 | Msa1145100:CDS | 50.0% | |
| GCTGTCATGGAAGTCAGGAT+TGG | - | chr7_4:21616225-21616244 | None:intergenic | 50.0% | |
| GTTTGGCTGTCATGGAAGTC+AGG | - | chr7_4:21616230-21616249 | None:intergenic | 50.0% | |
| TCTGACAGGAGCCAAGGTAT+TGG | + | chr7_4:21616642-21616661 | Msa1145100:intron | 50.0% | |
| GGCATTTGGCTAGACTGATC+TGG | + | chr7_4:21617137-21617156 | Msa1145100:intron | 50.0% | |
| !! | AGCAAGGTTTTCTGGCAGAG+AGG | + | chr7_4:21617264-21617283 | Msa1145100:CDS | 50.0% |
| !! | TTTTCTGGCAGAGAGGAACG+TGG | + | chr7_4:21617271-21617290 | Msa1145100:CDS | 50.0% |
| ! | CAGAGAGGAACGTGGATTGT+AGG | + | chr7_4:21617279-21617298 | Msa1145100:CDS | 50.0% |
| ! | GTTGGCTCCCTTCCAATCCT+TGG | - | chr7_4:21613430-21613449 | None:intergenic | 55.0% |
| ATTGGAAGGGAGCCAACCTG+TGG | + | chr7_4:21613433-21613452 | Msa1145100:CDS | 55.0% | |
| !! | TCGTATTGGTGTCGGACACG+AGG | + | chr7_4:21613702-21613721 | Msa1145100:intron | 55.0% |
| !!! | GTGCCGTTGTTTTTGGCTCC+CGG | - | chr7_4:21614724-21614743 | None:intergenic | 55.0% |
| ! | ATCTCCATTCGGGAAGCACG+TGG | - | chr7_4:21615034-21615053 | None:intergenic | 55.0% |
| GCGAGCCTCATAGTGCTAGA+TGG | + | chr7_4:21615089-21615108 | Msa1145100:intron | 55.0% | |
| GATGGTCAATGAGGGTGGTG+TGG | + | chr7_4:21615107-21615126 | Msa1145100:intron | 55.0% | |
| GTCAATGAGGGTGGTGTGGT+TGG | + | chr7_4:21615111-21615130 | Msa1145100:intron | 55.0% | |
| ATGAGGGTGGTGTGGTTGGT+AGG | + | chr7_4:21615115-21615134 | Msa1145100:intron | 55.0% | |
| GGGCTTCCCCGCTAAGTTTA+AGG | + | chr7_4:21615767-21615786 | Msa1145100:CDS | 55.0% | |
| ! | CCACTCATGTAGCGTTGGGT+GGG | - | chr7_4:21615858-21615877 | None:intergenic | 55.0% |
| ! | ACCACTCATGTAGCGTTGGG+TGG | - | chr7_4:21615859-21615878 | None:intergenic | 55.0% |
| TGTCAAGTTCCCCATACGGC+TGG | + | chr7_4:21615953-21615972 | Msa1145100:CDS | 55.0% | |
| AAGTTCCCCATACGGCTGGA+GGG | + | chr7_4:21615957-21615976 | Msa1145100:CDS | 55.0% | |
| GACTCTTAACGCTGTCCCCT+TGG | + | chr7_4:21616100-21616119 | Msa1145100:intron | 55.0% | |
| ! | TGCGGGGTGACTAGCTGAGA+AGG | + | chr7_4:21614924-21614943 | Msa1145100:intron | 60.0% |
| AGGTGATGTGATGGCTGGGG+TGG | + | chr7_4:21614944-21614963 | Msa1145100:intron | 60.0% | |
| GATGTGATGGCTGGGGTGGT+TGG | + | chr7_4:21614948-21614967 | Msa1145100:intron | 60.0% | |
| !! | AGGGTGGTGTGGTTGGTAGG+AGG | + | chr7_4:21615118-21615137 | Msa1145100:intron | 60.0% |
| TAGCGGGGAAGCCCAGTTTC+TGG | - | chr7_4:21615761-21615780 | None:intergenic | 60.0% | |
| CCCACCCAACGCTACATGAG+TGG | + | chr7_4:21615855-21615874 | Msa1145100:intron | 60.0% | |
| CAAGTTCCCCATACGGCTGG+AGG | + | chr7_4:21615956-21615975 | Msa1145100:CDS | 60.0% | |
| CAAGACCCTCCAGCCGTATG+GGG | - | chr7_4:21615965-21615984 | None:intergenic | 60.0% | |
| GCAAGACCCTCCAGCCGTAT+GGG | - | chr7_4:21615966-21615985 | None:intergenic | 60.0% | |
| TGCAAGACCCTCCAGCCGTA+TGG | - | chr7_4:21615967-21615986 | None:intergenic | 60.0% | |
| CTCAGCTAGTCACCCCGCAG+TGG | - | chr7_4:21614923-21614942 | None:intergenic | 65.0% | |
| GCTGCCACGTGCTTCCCGAA+TGG | + | chr7_4:21615027-21615046 | Msa1145100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 21612830 | 21617594 | 21612830 | ID=Msa1145100;Name=Msa1145100 |
| chr7_4 | mRNA | 21612830 | 21617594 | 21612830 | ID=Msa1145100-mRNA-1;Parent=Msa1145100;Name=Msa1145100-mRNA-1;_AED=0.23;_eAED=0.23;_QI=332|0.77|0.8|1|0.66|0.6|10|277|186 |
| chr7_4 | exon | 21612830 | 21613126 | 21612830 | ID=Msa1145100-mRNA-1:exon:5220;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21613384 | 21613495 | 21613384 | ID=Msa1145100-mRNA-1:exon:5221;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21614314 | 21614320 | 21614314 | ID=Msa1145100-mRNA-1:exon:5222;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21614695 | 21614766 | 21614695 | ID=Msa1145100-mRNA-1:exon:5223;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21615446 | 21615496 | 21615446 | ID=Msa1145100-mRNA-1:exon:5224;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21615744 | 21615788 | 21615744 | ID=Msa1145100-mRNA-1:exon:5225;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21615918 | 21616010 | 21615918 | ID=Msa1145100-mRNA-1:exon:5226;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21616556 | 21616657 | 21616556 | ID=Msa1145100-mRNA-1:exon:5227;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21616751 | 21616792 | 21616751 | ID=Msa1145100-mRNA-1:exon:5228;Parent=Msa1145100-mRNA-1 |
| chr7_4 | exon | 21617246 | 21617594 | 21617246 | ID=Msa1145100-mRNA-1:exon:5229;Parent=Msa1145100-mRNA-1 |
| chr7_4 | five_prime_UTR | 21612830 | 21613126 | 21612830 | ID=Msa1145100-mRNA-1:five_prime_utr;Parent=Msa1145100-mRNA-1 |
| chr7_4 | five_prime_UTR | 21613384 | 21613418 | 21613384 | ID=Msa1145100-mRNA-1:five_prime_utr;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21613419 | 21613495 | 21613419 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21614314 | 21614320 | 21614314 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21614695 | 21614766 | 21614695 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21615446 | 21615496 | 21615446 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21615744 | 21615788 | 21615744 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21615918 | 21616010 | 21615918 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21616556 | 21616657 | 21616556 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21616751 | 21616792 | 21616751 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | CDS | 21617246 | 21617317 | 21617246 | ID=Msa1145100-mRNA-1:cds;Parent=Msa1145100-mRNA-1 |
| chr7_4 | three_prime_UTR | 21617318 | 21617594 | 21617318 | ID=Msa1145100-mRNA-1:three_prime_utr;Parent=Msa1145100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
