Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145380 | XP_013469148.2 | 92.144 | 471 | 31 | 1 | 1 | 465 | 1 | 471 | 0.0 | 865 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145380 | sp|A7PZL3|PGLR_VITVI | 53.545 | 409 | 185 | 3 | 39 | 443 | 59 | 466 | 1.63e-157 | 458 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145380 | A0A396K3J2 | 92.144 | 471 | 31 | 1 | 1 | 465 | 1 | 471 | 0.0 | 865 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030390 | Msa1145380 | 0.896456 | 3.624798e-76 | -8.615850e-47 |
Msa0173750 | Msa1145380 | 0.882188 | 1.284489e-70 | -8.615850e-47 |
Msa0173840 | Msa1145380 | 0.889994 | 1.470473e-73 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145380 | MtrunA17_Chr1g0193961 | 92.144 | 471 | 31 | 1 | 1 | 465 | 1 | 471 | 0.0 | 865 |
Msa1145380 | MtrunA17_Chr7g0270821 | 80.828 | 459 | 87 | 1 | 1 | 458 | 1 | 459 | 0.0 | 780 |
Msa1145380 | MtrunA17_Chr2g0295241 | 56.313 | 396 | 170 | 2 | 39 | 431 | 33 | 428 | 2.92e-163 | 468 |
Msa1145380 | MtrunA17_Chr8g0387391 | 53.659 | 410 | 182 | 3 | 39 | 440 | 40 | 449 | 1.13e-161 | 465 |
Msa1145380 | MtrunA17_Chr4g0067811 | 56.423 | 397 | 170 | 2 | 39 | 432 | 36 | 432 | 1.40e-161 | 464 |
Msa1145380 | MtrunA17_Chr3g0095221 | 53.023 | 430 | 195 | 2 | 12 | 434 | 13 | 442 | 5.99e-159 | 457 |
Msa1145380 | MtrunA17_Chr1g0202651 | 55.000 | 400 | 176 | 2 | 39 | 434 | 51 | 450 | 2.03e-156 | 452 |
Msa1145380 | MtrunA17_Chr7g0248451 | 53.056 | 409 | 187 | 3 | 39 | 443 | 51 | 458 | 1.65e-154 | 447 |
Msa1145380 | MtrunA17_Chr8g0348491 | 52.969 | 421 | 190 | 3 | 39 | 451 | 51 | 471 | 2.39e-154 | 447 |
Msa1145380 | MtrunA17_Chr7g0255311 | 54.839 | 403 | 175 | 3 | 39 | 434 | 59 | 461 | 1.00e-153 | 446 |
Msa1145380 | MtrunA17_Chr1g0202641 | 54.250 | 400 | 179 | 2 | 39 | 434 | 51 | 450 | 3.72e-147 | 444 |
Msa1145380 | MtrunA17_Chr1g0202641 | 53.750 | 400 | 181 | 2 | 39 | 434 | 551 | 950 | 2.17e-143 | 435 |
Msa1145380 | MtrunA17_Chr5g0442221 | 51.936 | 439 | 198 | 4 | 4 | 431 | 2 | 438 | 9.00e-147 | 426 |
Msa1145380 | MtrunA17_Chr3g0130251 | 54.220 | 391 | 177 | 2 | 44 | 432 | 77 | 467 | 7.16e-145 | 422 |
Msa1145380 | MtrunA17_Chr4g0070281 | 47.945 | 438 | 215 | 6 | 4 | 433 | 38 | 470 | 1.94e-142 | 417 |
Msa1145380 | MtrunA17_Chr1g0202621 | 50.750 | 400 | 187 | 3 | 39 | 434 | 44 | 437 | 2.65e-141 | 413 |
Msa1145380 | MtrunA17_Chr2g0301091 | 47.124 | 452 | 215 | 8 | 3 | 434 | 8 | 455 | 8.14e-138 | 404 |
Msa1145380 | MtrunA17_Chr2g0319881 | 88.827 | 179 | 20 | 0 | 1 | 179 | 1 | 179 | 5.93e-108 | 317 |
Msa1145380 | MtrunA17_Chr5g0418411 | 32.198 | 323 | 180 | 10 | 44 | 357 | 30 | 322 | 3.80e-28 | 115 |
Msa1145380 | MtrunA17_Chr8g0365901 | 29.651 | 344 | 201 | 12 | 43 | 376 | 65 | 377 | 2.74e-24 | 105 |
Msa1145380 | MtrunA17_Chr7g0258111 | 27.586 | 319 | 184 | 8 | 42 | 346 | 47 | 332 | 4.55e-24 | 104 |
Msa1145380 | MtrunA17_Chr2g0319871 | 70.312 | 64 | 19 | 0 | 185 | 248 | 1 | 64 | 2.81e-23 | 93.2 |
Msa1145380 | MtrunA17_Chr8g0337571 | 28.824 | 340 | 193 | 12 | 7 | 340 | 4 | 300 | 2.47e-22 | 98.6 |
Msa1145380 | MtrunA17_Chr3g0121891 | 26.149 | 348 | 207 | 8 | 45 | 379 | 31 | 341 | 2.93e-22 | 98.6 |
Msa1145380 | MtrunA17_Chr6g0449961 | 27.950 | 322 | 180 | 9 | 42 | 350 | 44 | 326 | 2.95e-22 | 98.6 |
Msa1145380 | MtrunA17_Chr5g0413141 | 26.879 | 439 | 256 | 17 | 38 | 446 | 54 | 457 | 1.06e-21 | 97.4 |
Msa1145380 | MtrunA17_Chr3g0100091 | 35.149 | 202 | 107 | 6 | 146 | 341 | 77 | 260 | 2.89e-21 | 94.7 |
Msa1145380 | MtrunA17_Chr4g0043661 | 26.406 | 409 | 233 | 13 | 44 | 426 | 24 | 390 | 3.20e-21 | 95.5 |
Msa1145380 | MtrunA17_Chr3g0121881 | 26.471 | 408 | 249 | 12 | 33 | 425 | 23 | 394 | 1.31e-20 | 93.6 |
Msa1145380 | MtrunA17_Chr1g0150291 | 25.682 | 440 | 260 | 14 | 6 | 427 | 17 | 407 | 4.72e-20 | 92.0 |
Msa1145380 | MtrunA17_Chr7g0230891 | 26.136 | 440 | 247 | 18 | 13 | 428 | 14 | 399 | 8.49e-20 | 91.3 |
Msa1145380 | MtrunA17_Chr5g0413411 | 25.581 | 344 | 187 | 10 | 44 | 350 | 122 | 433 | 5.33e-19 | 89.7 |
Msa1145380 | MtrunA17_Chr6g0461181 | 24.714 | 437 | 255 | 15 | 27 | 418 | 15 | 422 | 6.25e-19 | 89.0 |
Msa1145380 | MtrunA17_Chr8g0337581 | 28.125 | 320 | 189 | 11 | 45 | 357 | 33 | 318 | 6.64e-19 | 88.6 |
Msa1145380 | MtrunA17_Chr6g0468871 | 53.247 | 77 | 35 | 1 | 236 | 311 | 22 | 98 | 1.45e-18 | 80.9 |
Msa1145380 | MtrunA17_Chr4g0052621 | 28.349 | 321 | 186 | 10 | 45 | 350 | 67 | 358 | 1.84e-18 | 87.8 |
Msa1145380 | MtrunA17_Chr8g0336481 | 29.787 | 235 | 127 | 7 | 149 | 374 | 43 | 248 | 2.63e-18 | 84.7 |
Msa1145380 | MtrunA17_Chr4g0020771 | 29.614 | 233 | 138 | 7 | 156 | 376 | 168 | 386 | 9.39e-18 | 85.5 |
Msa1145380 | MtrunA17_Chr2g0332801 | 28.963 | 328 | 183 | 12 | 43 | 354 | 59 | 352 | 9.81e-18 | 85.5 |
Msa1145380 | MtrunA17_Chr2g0332971 | 26.045 | 311 | 185 | 9 | 42 | 338 | 27 | 306 | 1.04e-17 | 85.1 |
Msa1145380 | MtrunA17_Chr8g0365891 | 26.361 | 349 | 183 | 10 | 42 | 350 | 106 | 420 | 1.42e-17 | 85.1 |
Msa1145380 | MtrunA17_Chr7g0270361 | 26.667 | 360 | 197 | 13 | 45 | 380 | 69 | 385 | 2.55e-17 | 84.3 |
Msa1145380 | MtrunA17_Chr3g0089021 | 29.259 | 270 | 158 | 7 | 117 | 380 | 138 | 380 | 3.82e-17 | 83.6 |
Msa1145380 | MtrunA17_Chr4g0043431 | 27.714 | 350 | 211 | 13 | 44 | 384 | 36 | 352 | 4.28e-17 | 83.2 |
Msa1145380 | MtrunA17_Chr1g0150301 | 23.898 | 431 | 273 | 12 | 7 | 427 | 4 | 389 | 4.67e-17 | 82.8 |
Msa1145380 | MtrunA17_Chr2g0303941 | 27.019 | 322 | 193 | 10 | 42 | 355 | 27 | 314 | 1.72e-16 | 81.3 |
Msa1145380 | MtrunA17_Chr1g0194231 | 26.994 | 326 | 190 | 8 | 43 | 350 | 81 | 376 | 2.73e-16 | 81.3 |
Msa1145380 | MtrunA17_Chr8g0337601 | 32.941 | 170 | 98 | 3 | 192 | 357 | 12 | 169 | 4.49e-16 | 77.8 |
Msa1145380 | MtrunA17_Chr4g0018151 | 25.806 | 434 | 260 | 14 | 7 | 425 | 49 | 435 | 8.43e-16 | 79.3 |
Msa1145380 | MtrunA17_Chr1g0195221 | 26.266 | 316 | 197 | 8 | 45 | 352 | 37 | 324 | 1.61e-14 | 75.1 |
Msa1145380 | MtrunA17_Chr4g0067631 | 25.321 | 312 | 187 | 11 | 43 | 340 | 52 | 331 | 1.79e-14 | 75.1 |
Msa1145380 | MtrunA17_Chr1g0173451 | 27.551 | 294 | 172 | 11 | 156 | 433 | 172 | 440 | 4.70e-13 | 70.9 |
Msa1145380 | MtrunA17_Chr7g0228411 | 26.989 | 352 | 200 | 12 | 30 | 352 | 27 | 350 | 6.04e-13 | 70.5 |
Msa1145380 | MtrunA17_Chr8g0337511 | 31.737 | 167 | 102 | 3 | 189 | 353 | 12 | 168 | 8.71e-13 | 68.2 |
Msa1145380 | MtrunA17_Chr1g0149241 | 22.849 | 337 | 218 | 8 | 7 | 340 | 5 | 302 | 1.28e-12 | 68.9 |
Msa1145380 | MtrunA17_Chr7g0257701 | 28.718 | 195 | 119 | 4 | 150 | 340 | 191 | 369 | 2.49e-12 | 68.6 |
Msa1145380 | MtrunA17_Chr2g0293681 | 28.704 | 216 | 129 | 5 | 148 | 350 | 157 | 360 | 2.79e-12 | 68.6 |
Msa1145380 | MtrunA17_Chr6g0468861 | 43.750 | 64 | 35 | 1 | 346 | 408 | 12 | 75 | 5.11e-11 | 58.5 |
Msa1145380 | MtrunA17_Chr2g0291841 | 26.510 | 298 | 187 | 11 | 145 | 428 | 82 | 361 | 6.41e-11 | 63.9 |
Msa1145380 | MtrunA17_Chr8g0337521 | 25.784 | 287 | 161 | 12 | 44 | 321 | 32 | 275 | 9.07e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145380 | AT3G62110.1 | 68.499 | 473 | 139 | 7 | 1 | 465 | 1 | 471 | 0.0 | 650 |
Msa1145380 | AT3G62110.2 | 68.499 | 473 | 139 | 7 | 1 | 465 | 1 | 471 | 0.0 | 650 |
Msa1145380 | AT4G23820.1 | 54.460 | 426 | 192 | 1 | 8 | 431 | 6 | 431 | 5.97e-163 | 468 |
Msa1145380 | AT4G23500.1 | 55.000 | 400 | 176 | 2 | 39 | 434 | 64 | 463 | 5.95e-160 | 462 |
Msa1145380 | AT3G61490.2 | 51.370 | 438 | 207 | 3 | 1 | 432 | 1 | 438 | 2.21e-157 | 455 |
Msa1145380 | AT3G61490.3 | 51.370 | 438 | 207 | 3 | 1 | 432 | 1 | 438 | 2.21e-157 | 455 |
Msa1145380 | AT3G61490.1 | 51.370 | 438 | 207 | 3 | 1 | 432 | 1 | 438 | 2.21e-157 | 455 |
Msa1145380 | AT3G61490.5 | 51.370 | 438 | 207 | 3 | 1 | 432 | 16 | 453 | 2.63e-157 | 455 |
Msa1145380 | AT3G61490.4 | 51.370 | 438 | 207 | 3 | 1 | 432 | 114 | 551 | 1.02e-156 | 457 |
Msa1145380 | AT4G33440.1 | 55.838 | 394 | 172 | 2 | 43 | 434 | 72 | 465 | 3.62e-154 | 446 |
Msa1145380 | AT3G16850.1 | 51.382 | 434 | 204 | 3 | 30 | 461 | 27 | 455 | 2.12e-153 | 444 |
Msa1145380 | AT5G41870.1 | 51.522 | 427 | 205 | 2 | 8 | 432 | 10 | 436 | 1.83e-151 | 439 |
Msa1145380 | AT3G48950.1 | 50.600 | 417 | 201 | 3 | 39 | 450 | 41 | 457 | 4.75e-151 | 438 |
Msa1145380 | AT5G49215.2 | 53.015 | 398 | 182 | 2 | 39 | 431 | 37 | 434 | 3.83e-147 | 427 |
Msa1145380 | AT5G49215.1 | 53.015 | 398 | 182 | 2 | 39 | 431 | 39 | 436 | 4.00e-147 | 427 |
Msa1145380 | AT2G23900.1 | 48.064 | 439 | 216 | 5 | 11 | 437 | 17 | 455 | 1.19e-143 | 420 |
Msa1145380 | AT3G06770.5 | 51.759 | 398 | 189 | 2 | 39 | 433 | 40 | 437 | 1.45e-142 | 416 |
Msa1145380 | AT3G06770.2 | 51.759 | 398 | 189 | 2 | 39 | 433 | 39 | 436 | 1.50e-142 | 416 |
Msa1145380 | AT1G19170.1 | 47.573 | 412 | 203 | 7 | 31 | 432 | 74 | 482 | 3.12e-128 | 381 |
Msa1145380 | AT3G42950.1 | 45.771 | 402 | 213 | 4 | 37 | 433 | 60 | 461 | 3.15e-128 | 380 |
Msa1145380 | AT3G06770.1 | 48.907 | 366 | 184 | 2 | 71 | 433 | 2 | 367 | 5.52e-122 | 361 |
Msa1145380 | AT3G06770.3 | 48.907 | 366 | 184 | 2 | 71 | 433 | 2 | 367 | 5.52e-122 | 361 |
Msa1145380 | AT3G06770.4 | 45.115 | 348 | 183 | 3 | 94 | 433 | 2 | 349 | 3.88e-101 | 307 |
Msa1145380 | AT3G57790.2 | 29.375 | 320 | 183 | 6 | 42 | 346 | 34 | 325 | 1.53e-32 | 129 |
Msa1145380 | AT3G57790.1 | 29.375 | 320 | 183 | 6 | 42 | 346 | 34 | 325 | 1.53e-32 | 129 |
Msa1145380 | AT3G15720.3 | 30.899 | 356 | 194 | 13 | 41 | 384 | 21 | 336 | 1.62e-29 | 120 |
Msa1145380 | AT3G15720.1 | 30.899 | 356 | 194 | 13 | 41 | 384 | 22 | 337 | 1.63e-29 | 120 |
Msa1145380 | AT3G15720.2 | 31.180 | 356 | 190 | 14 | 41 | 384 | 21 | 333 | 6.07e-28 | 116 |
Msa1145380 | AT3G15720.4 | 32.794 | 247 | 140 | 7 | 146 | 384 | 45 | 273 | 1.36e-24 | 105 |
Msa1145380 | AT5G17200.1 | 29.667 | 300 | 173 | 8 | 43 | 338 | 39 | 304 | 7.54e-24 | 103 |
Msa1145380 | AT5G14650.1 | 28.053 | 303 | 186 | 8 | 42 | 340 | 50 | 324 | 2.05e-23 | 102 |
Msa1145380 | AT1G70500.1 | 28.488 | 344 | 205 | 11 | 43 | 376 | 67 | 379 | 2.59e-22 | 99.8 |
Msa1145380 | AT1G56710.1 | 29.518 | 332 | 190 | 9 | 37 | 352 | 42 | 345 | 6.13e-22 | 98.2 |
Msa1145380 | AT5G27530.1 | 26.546 | 388 | 232 | 12 | 44 | 420 | 54 | 399 | 6.18e-22 | 98.6 |
Msa1145380 | AT1G60590.1 | 24.020 | 408 | 229 | 12 | 41 | 404 | 121 | 491 | 1.05e-21 | 98.2 |
Msa1145380 | AT3G57510.1 | 27.344 | 384 | 219 | 14 | 38 | 410 | 63 | 397 | 1.42e-21 | 97.1 |
Msa1145380 | AT3G26610.1 | 27.554 | 323 | 184 | 11 | 44 | 350 | 68 | 356 | 3.78e-21 | 96.3 |
Msa1145380 | AT1G10640.1 | 25.248 | 404 | 220 | 12 | 44 | 404 | 120 | 484 | 5.27e-21 | 96.3 |
Msa1145380 | AT1G23460.2 | 26.531 | 343 | 213 | 8 | 43 | 376 | 43 | 355 | 5.90e-21 | 95.5 |
Msa1145380 | AT4G32380.1 | 33.990 | 203 | 113 | 5 | 146 | 344 | 118 | 303 | 6.44e-21 | 95.5 |
Msa1145380 | AT1G23460.1 | 27.089 | 347 | 206 | 10 | 43 | 376 | 67 | 379 | 6.67e-21 | 95.5 |
Msa1145380 | AT2G41850.1 | 30.645 | 310 | 177 | 9 | 40 | 340 | 65 | 345 | 1.29e-20 | 94.4 |
Msa1145380 | AT4G35670.1 | 29.836 | 305 | 172 | 10 | 44 | 339 | 25 | 296 | 4.44e-20 | 92.4 |
Msa1145380 | AT4G35670.2 | 35.354 | 198 | 108 | 5 | 146 | 339 | 8 | 189 | 1.61e-19 | 89.0 |
Msa1145380 | AT5G14650.2 | 26.596 | 282 | 175 | 8 | 42 | 319 | 50 | 303 | 3.10e-19 | 88.6 |
Msa1145380 | AT1G80170.1 | 25.556 | 360 | 229 | 9 | 36 | 384 | 43 | 374 | 6.53e-19 | 89.4 |
Msa1145380 | AT2G15460.1 | 26.546 | 388 | 230 | 12 | 11 | 384 | 6 | 352 | 6.92e-19 | 89.0 |
Msa1145380 | AT5G44840.1 | 28.339 | 307 | 168 | 10 | 45 | 337 | 26 | 294 | 1.38e-18 | 87.8 |
Msa1145380 | AT2G15470.1 | 26.972 | 393 | 222 | 15 | 11 | 384 | 6 | 352 | 1.81e-18 | 87.8 |
Msa1145380 | AT2G43880.2 | 29.355 | 310 | 173 | 10 | 42 | 341 | 30 | 303 | 5.38e-18 | 85.5 |
Msa1145380 | AT1G48100.1 | 27.385 | 325 | 194 | 9 | 45 | 355 | 82 | 378 | 7.85e-18 | 86.3 |
Msa1145380 | AT2G43880.1 | 26.500 | 400 | 245 | 13 | 42 | 428 | 30 | 393 | 9.94e-18 | 85.5 |
Msa1145380 | AT1G17150.1 | 24.742 | 388 | 235 | 12 | 10 | 384 | 8 | 351 | 1.02e-17 | 85.5 |
Msa1145380 | AT2G15450.1 | 26.031 | 388 | 232 | 12 | 11 | 384 | 6 | 352 | 1.03e-17 | 85.5 |
Msa1145380 | AT2G26620.1 | 25.905 | 359 | 220 | 9 | 38 | 384 | 26 | 350 | 2.66e-17 | 84.0 |
Msa1145380 | AT1G02790.1 | 26.286 | 350 | 211 | 9 | 40 | 381 | 49 | 359 | 4.34e-17 | 83.6 |
Msa1145380 | AT4G13760.1 | 24.112 | 394 | 241 | 13 | 7 | 384 | 1 | 352 | 1.23e-16 | 82.0 |
Msa1145380 | AT1G80170.2 | 26.780 | 295 | 177 | 9 | 36 | 319 | 43 | 309 | 5.45e-16 | 79.3 |
Msa1145380 | AT1G02460.1 | 27.070 | 314 | 186 | 7 | 44 | 340 | 90 | 377 | 5.60e-16 | 80.5 |
Msa1145380 | AT5G44830.1 | 31.720 | 186 | 98 | 5 | 156 | 337 | 75 | 235 | 7.28e-16 | 79.0 |
Msa1145380 | AT4G32375.1 | 32.524 | 206 | 114 | 7 | 145 | 344 | 18 | 204 | 8.94e-16 | 79.7 |
Msa1145380 | AT4G32380.2 | 31.553 | 206 | 119 | 6 | 146 | 346 | 118 | 306 | 3.10e-15 | 77.8 |
Msa1145380 | AT3G07970.1 | 29.134 | 254 | 151 | 7 | 136 | 380 | 148 | 381 | 3.59e-15 | 77.8 |
Msa1145380 | AT2G40310.1 | 23.711 | 388 | 250 | 12 | 7 | 384 | 1 | 352 | 4.27e-15 | 77.4 |
Msa1145380 | AT1G43080.1 | 25.575 | 348 | 221 | 9 | 38 | 376 | 26 | 344 | 6.36e-15 | 77.0 |
Msa1145380 | AT1G65570.1 | 25.266 | 376 | 226 | 11 | 1 | 367 | 1 | 330 | 1.33e-14 | 75.9 |
Msa1145380 | AT1G43100.1 | 25.788 | 349 | 219 | 10 | 38 | 376 | 26 | 344 | 1.55e-14 | 75.9 |
Msa1145380 | AT2G43870.1 | 25.449 | 334 | 203 | 8 | 35 | 361 | 13 | 307 | 2.65e-14 | 74.7 |
Msa1145380 | AT1G78400.1 | 25.126 | 398 | 252 | 14 | 45 | 428 | 37 | 402 | 3.98e-14 | 74.3 |
Msa1145380 | AT4G01890.1 | 25.733 | 307 | 187 | 8 | 45 | 335 | 67 | 348 | 4.53e-14 | 74.7 |
Msa1145380 | AT1G43090.1 | 25.287 | 348 | 222 | 9 | 38 | 376 | 26 | 344 | 4.63e-14 | 74.3 |
Msa1145380 | AT4G32370.1 | 28.740 | 254 | 152 | 9 | 124 | 369 | 110 | 342 | 1.00e-13 | 72.8 |
Msa1145380 | AT1G80140.1 | 30.049 | 203 | 122 | 5 | 156 | 354 | 70 | 256 | 1.10e-13 | 72.4 |
Msa1145380 | AT3G14040.1 | 26.059 | 307 | 203 | 9 | 137 | 431 | 146 | 440 | 4.53e-13 | 71.2 |
Msa1145380 | AT1G05650.1 | 24.051 | 395 | 256 | 12 | 45 | 428 | 30 | 391 | 6.00e-13 | 70.9 |
Msa1145380 | AT3G59850.1 | 25.228 | 329 | 216 | 7 | 41 | 367 | 21 | 321 | 1.12e-12 | 69.7 |
Msa1145380 | AT3G59850.2 | 25.413 | 303 | 198 | 6 | 41 | 341 | 65 | 341 | 1.53e-12 | 69.7 |
Msa1145380 | AT2G43860.1 | 25.758 | 396 | 252 | 13 | 40 | 425 | 30 | 393 | 3.59e-12 | 68.6 |
Msa1145380 | AT3G07850.1 | 25.407 | 307 | 205 | 9 | 137 | 431 | 145 | 439 | 3.76e-12 | 68.6 |
Msa1145380 | AT5G48140.1 | 30.412 | 194 | 113 | 7 | 156 | 340 | 113 | 293 | 9.55e-12 | 67.0 |
Msa1145380 | AT2G43890.1 | 26.408 | 284 | 183 | 10 | 156 | 428 | 123 | 391 | 1.06e-11 | 67.0 |
Msa1145380 | AT4G18180.1 | 26.282 | 312 | 183 | 10 | 43 | 340 | 39 | 317 | 1.82e-11 | 66.2 |
Find 140 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCTTGAATTCACCATTT+TGG | 0.176069 | 7_4:+22184689 | Msa1145380:CDS |
TTTATCACAGGTAGAGTATC+TGG | 0.180895 | 7_4:-22185593 | None:intergenic |
TTCAAGTATCTTTGAACTTT+TGG | 0.194110 | 7_4:-22185943 | None:intergenic |
CTTTGTCGGCATACGAATTT+AGG | 0.216480 | 7_4:-22183579 | None:intergenic |
GTCACAATCCTTGCTCCTTT+TGG | 0.216904 | 7_4:+22184882 | Msa1145380:CDS |
ACTGACTATTGTTATGATTA+AGG | 0.221969 | 7_4:+22186131 | Msa1145380:three_prime_UTR |
ATTAGATTCACTGGTTTATA+TGG | 0.231131 | 7_4:+22185545 | Msa1145380:CDS |
CACCTTTAATACCTTGTATC+AGG | 0.254668 | 7_4:-22185664 | None:intergenic |
GGATCAATCCCATCTGTATT+TGG | 0.262778 | 7_4:-22184909 | None:intergenic |
AGTGTCAGTATTACTGAATT+TGG | 0.270099 | 7_4:+22183499 | Msa1145380:CDS |
TGGAACTGCTCGGACGTTAA+AGG | 0.278579 | 7_4:+22185746 | Msa1145380:CDS |
ATACTCTACCTGTGATAAAA+AGG | 0.281635 | 7_4:+22185597 | Msa1145380:CDS |
CGGCATAGAAGCCTCATTTA+TGG | 0.285632 | 7_4:+22184417 | Msa1145380:CDS |
CTCACTTCCGATGGCGATTC+CGG | 0.289304 | 7_4:-22185372 | None:intergenic |
AGAACAAAACCTGCAATATA+CGG | 0.290931 | 7_4:-22184722 | None:intergenic |
TTGAGTTGCTCACAAGCTTC+CGG | 0.312746 | 7_4:-22185788 | None:intergenic |
CGAACTTCCTTAATGTTTAT+CGG | 0.317616 | 7_4:-22183469 | None:intergenic |
TAGATGGTCAGGGGAGTATT+TGG | 0.324308 | 7_4:+22184575 | Msa1145380:CDS |
AAAAGTGGATGGGATGAATA+TGG | 0.325657 | 7_4:+22185284 | Msa1145380:CDS |
CGGAGGTGGCTCTGCAAAAC+AGG | 0.329603 | 7_4:+22182369 | Msa1145380:five_prime_UTR |
TTAACTGATGTCATCATAAC+AGG | 0.329835 | 7_4:+22184447 | Msa1145380:CDS |
CTGCAAACCGATAAACATTA+AGG | 0.342230 | 7_4:+22183462 | Msa1145380:CDS |
ATTGTAAAGTGTCAGTTTAG+TGG | 0.353949 | 7_4:+22186069 | Msa1145380:three_prime_UTR |
TGAGTTGCTCACAAGCTTCC+GGG | 0.361594 | 7_4:-22185787 | None:intergenic |
TCATCAGCCATCTCACTTTG+TGG | 0.368760 | 7_4:+22183656 | Msa1145380:CDS |
GTTGCAGCTCATGGACAGTT+TGG | 0.372964 | 7_4:+22183428 | Msa1145380:CDS |
CTATTCATCCCGTATATTGC+AGG | 0.373700 | 7_4:+22184713 | Msa1145380:CDS |
GAGTAGAGAATTCGGAGTTT+TGG | 0.375073 | 7_4:-22182343 | None:intergenic |
GATGAATATGGAATTTCATT+TGG | 0.376190 | 7_4:+22185296 | Msa1145380:CDS |
GATATTGCTATTAGATTCAC+TGG | 0.376562 | 7_4:+22185536 | Msa1145380:CDS |
CCAAGGTGATGTTAGAGATA+TGG | 0.381148 | 7_4:-22185505 | None:intergenic |
ACGGGATGAATAGTCCAAAA+TGG | 0.385267 | 7_4:-22184703 | None:intergenic |
ATTACTGTCGAGAATGTGAT+AGG | 0.387685 | 7_4:+22185620 | Msa1145380:CDS |
CATTGATTTGTTGCAGCTCA+TGG | 0.393647 | 7_4:+22183419 | Msa1145380:CDS |
CAATGGAACTATAGATGGTC+AGG | 0.395696 | 7_4:+22184564 | Msa1145380:CDS |
CGTTAAAGGATACTCTGAAT+TGG | 0.398386 | 7_4:+22185760 | Msa1145380:CDS |
GGCCTGATACAAGGTATTAA+AGG | 0.401311 | 7_4:+22185662 | Msa1145380:CDS |
AGAGTTCGAGTAGTCGAAAC+AGG | 0.413361 | 7_4:+22185867 | Msa1145380:CDS |
TCCGGCACTCGTTGTCCTCC+CGG | 0.414226 | 7_4:-22185354 | None:intergenic |
GGCATAGAAGCCTCATTTAT+GGG | 0.414586 | 7_4:+22184418 | Msa1145380:CDS |
CCTGCTGGCCAGTGGTTAAC+CGG | 0.420724 | 7_4:+22183622 | Msa1145380:CDS |
CCGGTTAACCACTGGCCAGC+AGG | 0.424506 | 7_4:-22183622 | None:intergenic |
GGGTTGCTTGGTTGCAGTCT+TGG | 0.430839 | 7_4:+22185888 | Msa1145380:CDS |
TTTATCAATTCGACTAAATG+AGG | 0.438068 | 7_4:-22184637 | None:intergenic |
CTCCGATGGAGTAGAGAATT+CGG | 0.442313 | 7_4:-22182351 | None:intergenic |
AAGCTTGGCTCCACCTTTGT+CGG | 0.447146 | 7_4:-22183593 | None:intergenic |
GTCAGTTTAGTGGTAAGTGC+AGG | 0.450053 | 7_4:+22186079 | Msa1145380:three_prime_UTR |
GGCAACAATGGAACTATAGA+TGG | 0.450842 | 7_4:+22184559 | Msa1145380:intron |
TCTGGGTCATATGAGTCATC+TGG | 0.458182 | 7_4:-22185575 | None:intergenic |
ATAAGAATAAAGACTTCTCC+CGG | 0.466538 | 7_4:+22185458 | Msa1145380:CDS |
TTAAATTGTGCCCATAAATG+AGG | 0.481414 | 7_4:-22184428 | None:intergenic |
GATCTAATTTCCATCAAAAG+TGG | 0.482686 | 7_4:+22185269 | Msa1145380:CDS |
GACAAAGATGCAGTAATACT+TGG | 0.490886 | 7_4:+22183682 | Msa1145380:CDS |
TGTTACAGAACTCTGAAGAT+TGG | 0.490896 | 7_4:+22184340 | Msa1145380:intron |
TTACAAGTTAACAGATATCA+TGG | 0.491363 | 7_4:+22185844 | Msa1145380:CDS |
CTCTGAAGATTGGCCAGTTG+TGG | 0.495481 | 7_4:+22184350 | Msa1145380:CDS |
GTGGATCCTCTACCATCATA+TGG | 0.496479 | 7_4:+22184369 | Msa1145380:CDS |
TTATCACAGGTAGAGTATCT+GGG | 0.500131 | 7_4:-22185592 | None:intergenic |
TGCTTGGTTGCAGTCTTGGT+AGG | 0.501300 | 7_4:+22185892 | Msa1145380:CDS |
CAGCCATCTCACTTTGTGGT+TGG | 0.504099 | 7_4:+22183660 | Msa1145380:CDS |
TCCTCTACCATCATATGGTA+GGG | 0.504397 | 7_4:+22184374 | Msa1145380:CDS |
ATTACTGAATTTGGAGCAGT+AGG | 0.510407 | 7_4:+22183508 | Msa1145380:CDS |
ACCGGGAGGACAACGAGTGC+CGG | 0.510929 | 7_4:+22185353 | Msa1145380:CDS |
TTTAACATAACCACCCCTCC+CGG | 0.511069 | 7_4:-22185477 | None:intergenic |
GATGGTAGAGGATCCACAAC+TGG | 0.512083 | 7_4:-22184363 | None:intergenic |
TCTGTATTTGGTGAACCAAA+AGG | 0.519215 | 7_4:-22184897 | None:intergenic |
GAATTTGGAGCAGTAGGAGA+TGG | 0.525396 | 7_4:+22183514 | Msa1145380:CDS |
TGGATGTTAATGTTTGTACT+TGG | 0.526630 | 7_4:-22185323 | None:intergenic |
GCCATCGGAAGTGAGATGTC+TGG | 0.526771 | 7_4:+22185380 | Msa1145380:CDS |
AATACAGATGGGATTGATCC+AGG | 0.527201 | 7_4:+22184912 | Msa1145380:CDS |
TTAACGTCCGAGCAGTTCCA+TGG | 0.530655 | 7_4:-22185743 | None:intergenic |
GTAGTCGAAACAGGGTTGCT+TGG | 0.530724 | 7_4:+22185876 | Msa1145380:CDS |
TAATTTCCATCAAAAGTGGA+TGG | 0.531088 | 7_4:+22185273 | Msa1145380:CDS |
AAACGCGCGGGCCTGATACA+AGG | 0.531662 | 7_4:+22185653 | Msa1145380:CDS |
TTTGGTTCACCAAATACAGA+TGG | 0.531824 | 7_4:+22184900 | Msa1145380:CDS |
ATAAAGACTTCTCCCGGGAG+GGG | 0.536499 | 7_4:+22185464 | Msa1145380:CDS |
ATTAACATCCACAGGCTCAC+CGG | 0.537205 | 7_4:+22185335 | Msa1145380:CDS |
GAAGGGAGTTGCCAGGTGGA+CGG | 0.537707 | 7_4:+22184397 | Msa1145380:CDS |
ATTCTCTACTCCATCGGAGG+TGG | 0.538159 | 7_4:+22182355 | Msa1145380:five_prime_UTR |
AATAAAGACTTCTCCCGGGA+GGG | 0.539545 | 7_4:+22185463 | Msa1145380:CDS |
ATACTCTGAATTGGTTTCCC+CGG | 0.540672 | 7_4:+22185769 | Msa1145380:CDS |
TACCATCATATGGTAGGGGA+AGG | 0.548235 | 7_4:+22184379 | Msa1145380:CDS |
GAACAAAACCTGCAATATAC+GGG | 0.548268 | 7_4:-22184721 | None:intergenic |
CGACCCAATGTAGGCAACAA+TGG | 0.548969 | 7_4:+22184547 | Msa1145380:intron |
TTGTCCTCCCGGTGAGCCTG+TGG | 0.550617 | 7_4:-22185343 | None:intergenic |
TCCCTTCCCCTACCATATGA+TGG | 0.550890 | 7_4:-22184381 | None:intergenic |
GTACAAACATTAACATCCAC+AGG | 0.555385 | 7_4:+22185327 | Msa1145380:CDS |
ATACGAATTTAGGTAGAAGA+TGG | 0.555815 | 7_4:-22183569 | None:intergenic |
CCCCTACCATATGATGGTAG+AGG | 0.560136 | 7_4:-22184375 | None:intergenic |
AGGCTTCTATGCCGTCCACC+TGG | 0.560231 | 7_4:-22184408 | None:intergenic |
TGCAGTAATACTTGGATCAA+CGG | 0.561147 | 7_4:+22183690 | Msa1145380:CDS |
TTAACATAACCACCCCTCCC+GGG | 0.564851 | 7_4:-22185476 | None:intergenic |
ATGGTCAGGGGAGTATTTGG+TGG | 0.566466 | 7_4:+22184578 | Msa1145380:CDS |
TTACTGTCGAGAATGTGATA+GGG | 0.570895 | 7_4:+22185621 | Msa1145380:CDS |
CTCCGAATTCTCTACTCCAT+CGG | 0.571890 | 7_4:+22182349 | Msa1145380:five_prime_UTR |
TTGGTTCACCAAATACAGAT+GGG | 0.571959 | 7_4:+22184901 | Msa1145380:CDS |
CAAAACTACCGGTTAACCAC+TGG | 0.574055 | 7_4:-22183630 | None:intergenic |
TTAACATCCACAGGCTCACC+GGG | 0.574227 | 7_4:+22185336 | Msa1145380:CDS |
AATTCGTATGCCGACAAAGG+TGG | 0.577479 | 7_4:+22183583 | Msa1145380:CDS |
CCAAAATGGTGAATTCAAGA+AGG | 0.579215 | 7_4:-22184689 | None:intergenic |
AATTTGGAGCAGTAGGAGAT+GGG | 0.579376 | 7_4:+22183515 | Msa1145380:CDS |
TCAGTTTAGTGGTAAGTGCA+GGG | 0.580269 | 7_4:+22186080 | Msa1145380:three_prime_UTR |
GATGGAAATTAGATCATCGC+CGG | 0.581092 | 7_4:-22185261 | None:intergenic |
TGTTGTCAAAGTGATATCAA+TGG | 0.584592 | 7_4:+22186036 | Msa1145380:three_prime_UTR |
AAGACTTCTCCCGGGAGGGG+TGG | 0.589573 | 7_4:+22185467 | Msa1145380:CDS |
TTATCAATTCGACTAAATGA+GGG | 0.594556 | 7_4:-22184636 | None:intergenic |
GAAGACTGTTATATGAGCAC+CGG | 0.595782 | 7_4:+22185242 | Msa1145380:CDS |
ATCCTCTACCATCATATGGT+AGG | 0.598263 | 7_4:+22184373 | Msa1145380:CDS |
CGGTTAACCACTGGCCAGCA+GGG | 0.600393 | 7_4:-22183621 | None:intergenic |
TTGGTGAACCAAAAGGAGCA+AGG | 0.603870 | 7_4:-22184890 | None:intergenic |
AATGGAACTATAGATGGTCA+GGG | 0.604106 | 7_4:+22184565 | Msa1145380:CDS |
TACTGTCGAGAATGTGATAG+GGG | 0.606390 | 7_4:+22185622 | Msa1145380:CDS |
CTAAATTCGTATGCCGACAA+AGG | 0.607464 | 7_4:+22183580 | Msa1145380:CDS |
CCATATCTCTAACATCACCT+TGG | 0.608668 | 7_4:+22185505 | Msa1145380:CDS |
AATTTCCATCAAAAGTGGAT+GGG | 0.610387 | 7_4:+22185274 | Msa1145380:CDS |
GGTAGGGGAAGGGAGTTGCC+AGG | 0.612580 | 7_4:+22184390 | Msa1145380:CDS |
GCTGATGAGATCAAAACTAC+CGG | 0.612616 | 7_4:-22183641 | None:intergenic |
GAGTTGCTCACAAGCTTCCG+GGG | 0.613710 | 7_4:-22185786 | None:intergenic |
ACGAGTGCCGGAATCGCCAT+CGG | 0.615761 | 7_4:+22185365 | Msa1145380:CDS |
GGGGAAAACATCAAACGCGC+GGG | 0.616437 | 7_4:+22185641 | Msa1145380:CDS |
CCTCTACCATCATATGGTAG+GGG | 0.616722 | 7_4:+22184375 | Msa1145380:CDS |
TCCAGACATCTCACTTCCGA+TGG | 0.620855 | 7_4:-22185381 | None:intergenic |
ACCATCATATGGTAGGGGAA+GGG | 0.626662 | 7_4:+22184380 | Msa1145380:CDS |
AGCAATATCTACATTAACCA+AGG | 0.627118 | 7_4:-22185522 | None:intergenic |
TGTCCAACCACAAAGTGAGA+TGG | 0.629482 | 7_4:-22183663 | None:intergenic |
CGAATTGATAAATTCAACAG+AGG | 0.637343 | 7_4:+22184648 | Msa1145380:CDS |
AGGGGAAGGGAGTTGCCAGG+TGG | 0.645313 | 7_4:+22184393 | Msa1145380:CDS |
CAGTTTAGTGGTAAGTGCAG+GGG | 0.646160 | 7_4:+22186081 | Msa1145380:three_prime_UTR |
TAAGAATAAAGACTTCTCCC+GGG | 0.654747 | 7_4:+22185459 | Msa1145380:CDS |
AGGGGAAAACATCAAACGCG+CGG | 0.655278 | 7_4:+22185640 | Msa1145380:CDS |
CGAATTCTCTACTCCATCGG+AGG | 0.657898 | 7_4:+22182352 | Msa1145380:five_prime_UTR |
GAATAAAGACTTCTCCCGGG+AGG | 0.661627 | 7_4:+22185462 | Msa1145380:CDS |
GTGCAGGGGACTAATAACCA+TGG | 0.661870 | 7_4:+22186095 | Msa1145380:three_prime_UTR |
ATCGGAAGTGAGATGTCTGG+AGG | 0.664879 | 7_4:+22185383 | Msa1145380:CDS |
TGGGATCACTCTCAATACAA+AGG | 0.671060 | 7_4:+22183534 | Msa1145380:CDS |
GAGTTCGAGTAGTCGAAACA+GGG | 0.687667 | 7_4:+22185868 | Msa1145380:CDS |
TGACATTCTGAATTGTAACA+TGG | 0.692990 | 7_4:-22184863 | None:intergenic |
TCAGTAATACTGACACTGTG+TGG | 0.693416 | 7_4:-22183493 | None:intergenic |
ATGGAACTATAGATGGTCAG+GGG | 0.713739 | 7_4:+22184566 | Msa1145380:CDS |
ACATCCACAGGCTCACCGGG+AGG | 0.716687 | 7_4:+22185339 | Msa1145380:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTTGATAAACAAAAAT+TGG | - | chr7_4:22182838-22182857 | None:intergenic | 10.0% |
!!! | AATAATATTTTTTGTGATTA+TGG | - | chr7_4:22184110-22184129 | None:intergenic | 10.0% |
!! | AGTAAAAAAAAAAAAAGGTA+AGG | - | chr7_4:22182290-22182309 | None:intergenic | 15.0% |
!!! | AAAATTTTCTTCATATGAAT+TGG | - | chr7_4:22182397-22182416 | None:intergenic | 15.0% |
!! | TTTCAGAAAACATTTAAATT+TGG | - | chr7_4:22182990-22183009 | None:intergenic | 15.0% |
!! | GTTTAGTATTTGTATAAATA+AGG | + | chr7_4:22184058-22184077 | Msa1145380:intron | 15.0% |
!! | CTAGCAGTAAAAAAAAAAAA+AGG | - | chr7_4:22182295-22182314 | None:intergenic | 20.0% |
!! | CTACTAATGATTACTAATAA+GGG | - | chr7_4:22182457-22182476 | None:intergenic | 20.0% |
!! | ATTAACACAGTTCAAATATT+TGG | - | chr7_4:22182788-22182807 | None:intergenic | 20.0% |
!! | AAAAGGAAGGAAAAAAAAAA+GGG | - | chr7_4:22182942-22182961 | None:intergenic | 20.0% |
!! | GATAATTTGAAAATTTACTC+AGG | - | chr7_4:22183022-22183041 | None:intergenic | 20.0% |
!! | ACATTAATTAATGTATGCAT+AGG | - | chr7_4:22183806-22183825 | None:intergenic | 20.0% |
!! | TATGTTTGTATTTCATTAAC+CGG | + | chr7_4:22184246-22184265 | Msa1145380:intron | 20.0% |
!! | ATATAAATATTGATGCCATT+TGG | + | chr7_4:22184524-22184543 | Msa1145380:intron | 20.0% |
! | CCTACTAATGATTACTAATA+AGG | - | chr7_4:22182458-22182477 | None:intergenic | 25.0% |
! | CCTTATTAGTAATCATTAGT+AGG | + | chr7_4:22182455-22182474 | Msa1145380:intron | 25.0% |
! | TATTAGTAATCATTAGTAGG+TGG | + | chr7_4:22182458-22182477 | Msa1145380:intron | 25.0% |
!!! | GTGGTTTGGTTATTTTAAAT+AGG | + | chr7_4:22182566-22182585 | Msa1145380:intron | 25.0% |
!!! | GTTTGGTTATTTTAAATAGG+TGG | + | chr7_4:22182569-22182588 | Msa1145380:intron | 25.0% |
!! | ATTTTAAATAGGTGGTTAGT+TGG | + | chr7_4:22182577-22182596 | Msa1145380:intron | 25.0% |
! | AACCATCAATGTAATTTAGA+CGG | + | chr7_4:22182633-22182652 | Msa1145380:intron | 25.0% |
!! | GTGATTAACCATAATTTTCA+GGG | + | chr7_4:22182655-22182674 | Msa1145380:intron | 25.0% |
! | ATCATCATTAACCACAAATT+TGG | - | chr7_4:22182729-22182748 | None:intergenic | 25.0% |
! | GAAAAGGAAGGAAAAAAAAA+AGG | - | chr7_4:22182943-22182962 | None:intergenic | 25.0% |
!! | CAAATTATCAATTTTCACTC+AGG | + | chr7_4:22183033-22183052 | Msa1145380:intron | 25.0% |
! | GATATCAACTTGTGTTAAAT+TGG | + | chr7_4:22183079-22183098 | Msa1145380:intron | 25.0% |
!!! | TCAATGCTTTTACGTTTTTT+GGG | + | chr7_4:22183102-22183121 | Msa1145380:intron | 25.0% |
! | AAATCACAGTTAATTCACAT+TGG | + | chr7_4:22183919-22183938 | Msa1145380:intron | 25.0% |
! | AATCACAGTTAATTCACATT+GGG | + | chr7_4:22183920-22183939 | Msa1145380:intron | 25.0% |
! | CTTCTAATCATAACTGAATA+AGG | - | chr7_4:22184039-22184058 | None:intergenic | 25.0% |
! | TTTAGAAAACTAGATAAGGA+AGG | - | chr7_4:22184146-22184165 | None:intergenic | 25.0% |
!!! | AGGTTTTAGAAAACTAGATA+AGG | - | chr7_4:22184150-22184169 | None:intergenic | 25.0% |
! | TACAAAATAATCCTTGCATA+GGG | - | chr7_4:22184183-22184202 | None:intergenic | 25.0% |
! | CATAACTTATATAGTAGTGA+TGG | - | chr7_4:22184230-22184249 | None:intergenic | 25.0% |
! | AATTAAACTACCAAGTTTGT+TGG | - | chr7_4:22184279-22184298 | None:intergenic | 25.0% |
! | TTATCAATTCGACTAAATGA+GGG | - | chr7_4:22184639-22184658 | None:intergenic | 25.0% |
! | TTTATCAATTCGACTAAATG+AGG | - | chr7_4:22184640-22184659 | None:intergenic | 25.0% |
! | ACTATTTCACAGTCTTAAAA+TGG | - | chr7_4:22184795-22184814 | None:intergenic | 25.0% |
! | ATATTGAATTCCTGTTCATT+TGG | + | chr7_4:22185009-22185028 | Msa1145380:intron | 25.0% |
!!! | GAGATATATTGATTTCAACA+AGG | - | chr7_4:22185096-22185115 | None:intergenic | 25.0% |
! | GATGAATATGGAATTTCATT+TGG | + | chr7_4:22185296-22185315 | Msa1145380:CDS | 25.0% |
!!! | ATTAGATTCACTGGTTTATA+TGG | + | chr7_4:22185545-22185564 | Msa1145380:CDS | 25.0% |
! | TAACAGTTTGAAAAATGATC+AGG | - | chr7_4:22185827-22185846 | None:intergenic | 25.0% |
! | TTACAAGTTAACAGATATCA+TGG | + | chr7_4:22185844-22185863 | Msa1145380:CDS | 25.0% |
!! | TTCAAGTATCTTTGAACTTT+TGG | - | chr7_4:22185946-22185965 | None:intergenic | 25.0% |
! | ACTGACTATTGTTATGATTA+AGG | + | chr7_4:22186131-22186150 | Msa1145380:three_prime_UTR | 25.0% |
CTAATAAGGGAAGATAGTAA+TGG | - | chr7_4:22182444-22182463 | None:intergenic | 30.0% | |
! | GGTGATTAACCATAATTTTC+AGG | + | chr7_4:22182654-22182673 | Msa1145380:intron | 30.0% |
!!! | ACAATTTTCAGGTGTTCAAT+TGG | - | chr7_4:22182694-22182713 | None:intergenic | 30.0% |
AATTGAACACCTGAAAATTG+TGG | + | chr7_4:22182693-22182712 | Msa1145380:intron | 30.0% | |
! | TGAGATTAACCACAATTTTC+AGG | - | chr7_4:22182705-22182724 | None:intergenic | 30.0% |
GTTAATCTCATCCAAATTTG+TGG | + | chr7_4:22182715-22182734 | Msa1145380:intron | 30.0% | |
TTGTGGTTAATGATGATTAG+TGG | + | chr7_4:22182732-22182751 | Msa1145380:intron | 30.0% | |
TGTGGTTAATGATGATTAGT+GGG | + | chr7_4:22182733-22182752 | Msa1145380:intron | 30.0% | |
! | GTCAATGCTTTTACGTTTTT+TGG | + | chr7_4:22183101-22183120 | Msa1145380:intron | 30.0% |
!! | CAATGCTTTTACGTTTTTTG+GGG | + | chr7_4:22183103-22183122 | Msa1145380:intron | 30.0% |
CGAACTTCCTTAATGTTTAT+CGG | - | chr7_4:22183472-22183491 | None:intergenic | 30.0% | |
AGTGTCAGTATTACTGAATT+TGG | + | chr7_4:22183499-22183518 | Msa1145380:CDS | 30.0% | |
ATACGAATTTAGGTAGAAGA+TGG | - | chr7_4:22183572-22183591 | None:intergenic | 30.0% | |
TTGCATAGGGTTAAAGTTAT+AGG | - | chr7_4:22184170-22184189 | None:intergenic | 30.0% | |
TATAACTTTAACCCTATGCA+AGG | + | chr7_4:22184169-22184188 | Msa1145380:intron | 30.0% | |
GTACAAAATAATCCTTGCAT+AGG | - | chr7_4:22184184-22184203 | None:intergenic | 30.0% | |
CATTACACACTATATCGTAA+TGG | - | chr7_4:22184322-22184341 | None:intergenic | 30.0% | |
TTAAATTGTGCCCATAAATG+AGG | - | chr7_4:22184431-22184450 | None:intergenic | 30.0% | |
TTAACTGATGTCATCATAAC+AGG | + | chr7_4:22184447-22184466 | Msa1145380:CDS | 30.0% | |
CGAATTGATAAATTCAACAG+AGG | + | chr7_4:22184648-22184667 | Msa1145380:CDS | 30.0% | |
AGAACAAAACCTGCAATATA+CGG | - | chr7_4:22184725-22184744 | None:intergenic | 30.0% | |
GTGAAATAGTAAAGCTTTCA+TGG | + | chr7_4:22184805-22184824 | Msa1145380:intron | 30.0% | |
TAGTAAAGCTTTCATGGTTA+TGG | + | chr7_4:22184811-22184830 | Msa1145380:intron | 30.0% | |
AGTAAAGCTTTCATGGTTAT+GGG | + | chr7_4:22184812-22184831 | Msa1145380:intron | 30.0% | |
TGACATTCTGAATTGTAACA+TGG | - | chr7_4:22184866-22184885 | None:intergenic | 30.0% | |
ATTAACAACTACATAGGGTA+TGG | - | chr7_4:22184964-22184983 | None:intergenic | 30.0% | |
TGTGCATTAACAACTACATA+GGG | - | chr7_4:22184969-22184988 | None:intergenic | 30.0% | |
TTGTGCATTAACAACTACAT+AGG | - | chr7_4:22184970-22184989 | None:intergenic | 30.0% | |
! | TACTTCCTTTATGCCTTTTT+GGG | - | chr7_4:22185036-22185055 | None:intergenic | 30.0% |
! | ATACTTCCTTTATGCCTTTT+TGG | - | chr7_4:22185037-22185056 | None:intergenic | 30.0% |
!!! | CGAGTCTTTTGAAACAAAAT+TGG | - | chr7_4:22185163-22185182 | None:intergenic | 30.0% |
!! | TTTTGTTTCAAAAGACTCGT+CGG | + | chr7_4:22185164-22185183 | Msa1145380:intron | 30.0% |
AGAATCTGGACACAAATAAA+AGG | - | chr7_4:22185204-22185223 | None:intergenic | 30.0% | |
CATACATTATCAGAAGAATC+TGG | - | chr7_4:22185218-22185237 | None:intergenic | 30.0% | |
GATCTAATTTCCATCAAAAG+TGG | + | chr7_4:22185269-22185288 | Msa1145380:CDS | 30.0% | |
TAATTTCCATCAAAAGTGGA+TGG | + | chr7_4:22185273-22185292 | Msa1145380:CDS | 30.0% | |
AATTTCCATCAAAAGTGGAT+GGG | + | chr7_4:22185274-22185293 | Msa1145380:CDS | 30.0% | |
TGGATGTTAATGTTTGTACT+TGG | - | chr7_4:22185326-22185345 | None:intergenic | 30.0% | |
!! | TTGCACTTTTTGAATCAAAC+AGG | - | chr7_4:22185439-22185458 | None:intergenic | 30.0% |
ATAAGAATAAAGACTTCTCC+CGG | + | chr7_4:22185458-22185477 | Msa1145380:CDS | 30.0% | |
AGCAATATCTACATTAACCA+AGG | - | chr7_4:22185525-22185544 | None:intergenic | 30.0% | |
! | GATATTGCTATTAGATTCAC+TGG | + | chr7_4:22185536-22185555 | Msa1145380:CDS | 30.0% |
ATACTCTACCTGTGATAAAA+AGG | + | chr7_4:22185597-22185616 | Msa1145380:CDS | 30.0% | |
! | ACAGTAATCCTTTTTATCAC+AGG | - | chr7_4:22185608-22185627 | None:intergenic | 30.0% |
ATGTGAGCAAAAAAAATCCA+TGG | + | chr7_4:22185726-22185745 | Msa1145380:CDS | 30.0% | |
TGTTGTCAAAGTGATATCAA+TGG | + | chr7_4:22186036-22186055 | Msa1145380:three_prime_UTR | 30.0% | |
! | ATTGTAAAGTGTCAGTTTAG+TGG | + | chr7_4:22186069-22186088 | Msa1145380:three_prime_UTR | 30.0% |
!! | CAGTGATAGTTTATTTTCCA+TGG | - | chr7_4:22186115-22186134 | None:intergenic | 30.0% |
!! | TTTAGCCGCAACTTTTTAAG+TGG | + | chr7_4:22182547-22182566 | Msa1145380:intron | 35.0% |
CCAAACCACTTAAAAAGTTG+CGG | - | chr7_4:22182555-22182574 | None:intergenic | 35.0% | |
GAATTTGACGCTTCTATTGA+TGG | - | chr7_4:22182610-22182629 | None:intergenic | 35.0% | |
CACCGTCTAAATTACATTGA+TGG | - | chr7_4:22182638-22182657 | None:intergenic | 35.0% | |
!! | TGATTAGTGGGCTTTATACA+TGG | + | chr7_4:22182745-22182764 | Msa1145380:intron | 35.0% |
TCTTGCTAAAAGAGGTGAAA+AGG | + | chr7_4:22182902-22182921 | Msa1145380:intron | 35.0% | |
CTTGCTAAAAGAGGTGAAAA+GGG | + | chr7_4:22182903-22182922 | Msa1145380:intron | 35.0% | |
TTGCTAAAAGAGGTGAAAAG+GGG | + | chr7_4:22182904-22182923 | Msa1145380:intron | 35.0% | |
GATTCCAAAAACGCTAGAAA+AGG | - | chr7_4:22182959-22182978 | None:intergenic | 35.0% | |
! | TTAGATTTTTCTCCTTCGTC+AGG | - | chr7_4:22183186-22183205 | None:intergenic | 35.0% |
TGATACGCTTCTAAGTGTAA+CGG | + | chr7_4:22183348-22183367 | Msa1145380:intron | 35.0% | |
!!! | CATGTTTATTTTGCAGCTAG+TGG | + | chr7_4:22183378-22183397 | Msa1145380:intron | 35.0% |
CTGCAAACCGATAAACATTA+AGG | + | chr7_4:22183462-22183481 | Msa1145380:CDS | 35.0% | |
! | ATTACTGAATTTGGAGCAGT+AGG | + | chr7_4:22183508-22183527 | Msa1145380:CDS | 35.0% |
GACAAAGATGCAGTAATACT+TGG | + | chr7_4:22183682-22183701 | Msa1145380:CDS | 35.0% | |
TGCAGTAATACTTGGATCAA+CGG | + | chr7_4:22183690-22183709 | Msa1145380:CDS | 35.0% | |
ACTGCATTGAACACAAACAA+AGG | - | chr7_4:22183733-22183752 | None:intergenic | 35.0% | |
! | TTGTGTTCAATGCAGTTTTG+TGG | + | chr7_4:22183737-22183756 | Msa1145380:intron | 35.0% |
! | ATGCATAGGAAGCATATCAT+AGG | - | chr7_4:22183792-22183811 | None:intergenic | 35.0% |
! | TGGCATTTGACTGTTTTCTA+GGG | + | chr7_4:22183980-22183999 | Msa1145380:intron | 35.0% |
!!! | ATTTGACTGTTTTCTAGGGT+TGG | + | chr7_4:22183984-22184003 | Msa1145380:intron | 35.0% |
GTAATAAATCATGACAGCCA+AGG | - | chr7_4:22184017-22184036 | None:intergenic | 35.0% | |
! | ATATCGTAATGGAGAACACA+TGG | - | chr7_4:22184311-22184330 | None:intergenic | 35.0% |
! | TGTTACAGAACTCTGAAGAT+TGG | + | chr7_4:22184340-22184359 | Msa1145380:intron | 35.0% |
AATGGAACTATAGATGGTCA+GGG | + | chr7_4:22184565-22184584 | Msa1145380:CDS | 35.0% | |
CCAAAATGGTGAATTCAAGA+AGG | - | chr7_4:22184692-22184711 | None:intergenic | 35.0% | |
! | CCTTCTTGAATTCACCATTT+TGG | + | chr7_4:22184689-22184708 | Msa1145380:CDS | 35.0% |
GAACAAAACCTGCAATATAC+GGG | - | chr7_4:22184724-22184743 | None:intergenic | 35.0% | |
! | TCTGTATTTGGTGAACCAAA+AGG | - | chr7_4:22184900-22184919 | None:intergenic | 35.0% |
! | TTTGGTTCACCAAATACAGA+TGG | + | chr7_4:22184900-22184919 | Msa1145380:CDS | 35.0% |
TTGGTTCACCAAATACAGAT+GGG | + | chr7_4:22184901-22184920 | Msa1145380:CDS | 35.0% | |
AAAAGTGGATGGGATGAATA+TGG | + | chr7_4:22185284-22185303 | Msa1145380:CDS | 35.0% | |
GTACAAACATTAACATCCAC+AGG | + | chr7_4:22185327-22185346 | Msa1145380:CDS | 35.0% | |
TAAGAATAAAGACTTCTCCC+GGG | + | chr7_4:22185459-22185478 | Msa1145380:CDS | 35.0% | |
! | TTATCACAGGTAGAGTATCT+GGG | - | chr7_4:22185595-22185614 | None:intergenic | 35.0% |
! | TTTATCACAGGTAGAGTATC+TGG | - | chr7_4:22185596-22185615 | None:intergenic | 35.0% |
ATTACTGTCGAGAATGTGAT+AGG | + | chr7_4:22185620-22185639 | Msa1145380:CDS | 35.0% | |
TTACTGTCGAGAATGTGATA+GGG | + | chr7_4:22185621-22185640 | Msa1145380:CDS | 35.0% | |
CACCTTTAATACCTTGTATC+AGG | - | chr7_4:22185667-22185686 | None:intergenic | 35.0% | |
AAAAAATCCATGGAACTGCT+CGG | + | chr7_4:22185736-22185755 | Msa1145380:CDS | 35.0% | |
CGTTAAAGGATACTCTGAAT+TGG | + | chr7_4:22185760-22185779 | Msa1145380:CDS | 35.0% | |
ACGTGACCTAAAAAGTTGAA+TGG | + | chr7_4:22185999-22186018 | Msa1145380:three_prime_UTR | 35.0% | |
! | GCAACACCATTCAACTTTTT+AGG | - | chr7_4:22186008-22186027 | None:intergenic | 35.0% |
! | GAGTAGAGAATTCGGAGTTT+TGG | - | chr7_4:22182346-22182365 | None:intergenic | 40.0% |
!!! | CCGCAACTTTTTAAGTGGTT+TGG | + | chr7_4:22182552-22182571 | Msa1145380:intron | 40.0% |
TTCGAACGCCCTGAAAATTA+TGG | - | chr7_4:22182666-22182685 | None:intergenic | 40.0% | |
! | ACCTCTTTTAGCAAGAGTGA+CGG | - | chr7_4:22182898-22182917 | None:intergenic | 40.0% |
CCAAAAACGCTAGAAAAGGA+AGG | - | chr7_4:22182955-22182974 | None:intergenic | 40.0% | |
!! | CCTTCCTTTTCTAGCGTTTT+TGG | + | chr7_4:22182952-22182971 | Msa1145380:intron | 40.0% |
TCACGAGATTACAGAGCTAT+GGG | - | chr7_4:22183061-22183080 | None:intergenic | 40.0% | |
ATCACGAGATTACAGAGCTA+TGG | - | chr7_4:22183062-22183081 | None:intergenic | 40.0% | |
!!! | GCTTTTACGTTTTTTGGGGT+TGG | + | chr7_4:22183107-22183126 | Msa1145380:intron | 40.0% |
! | TGAAGAAGCATATGAACTGC+TGG | + | chr7_4:22183289-22183308 | Msa1145380:intron | 40.0% |
!! | CATTGATTTGTTGCAGCTCA+TGG | + | chr7_4:22183419-22183438 | Msa1145380:CDS | 40.0% |
TCAGTAATACTGACACTGTG+TGG | - | chr7_4:22183496-22183515 | None:intergenic | 40.0% | |
! | AATTTGGAGCAGTAGGAGAT+GGG | + | chr7_4:22183515-22183534 | Msa1145380:CDS | 40.0% |
TGGGATCACTCTCAATACAA+AGG | + | chr7_4:22183534-22183553 | Msa1145380:CDS | 40.0% | |
CTTTGTCGGCATACGAATTT+AGG | - | chr7_4:22183582-22183601 | None:intergenic | 40.0% | |
CTAAATTCGTATGCCGACAA+AGG | + | chr7_4:22183580-22183599 | Msa1145380:CDS | 40.0% | |
GCTGATGAGATCAAAACTAC+CGG | - | chr7_4:22183644-22183663 | None:intergenic | 40.0% | |
!! | GTTCAATGCAGTTTTGTGGA+AGG | + | chr7_4:22183741-22183760 | Msa1145380:intron | 40.0% |
GCATATCATAGGAACAGTAC+AGG | - | chr7_4:22183781-22183800 | None:intergenic | 40.0% | |
GTTAATTCACATTGGGAAGC+TGG | + | chr7_4:22183927-22183946 | Msa1145380:intron | 40.0% | |
!! | AAATGCCACGTTTGGTTTGA+CGG | - | chr7_4:22183968-22183987 | None:intergenic | 40.0% |
AAACAGTCAAATGCCACGTT+TGG | - | chr7_4:22183976-22183995 | None:intergenic | 40.0% | |
! | GTGGCATTTGACTGTTTTCT+AGG | + | chr7_4:22183979-22183998 | Msa1145380:intron | 40.0% |
!! | CTAGGGTTGGTATATTACCT+TGG | + | chr7_4:22183997-22184016 | Msa1145380:intron | 40.0% |
ATAAGGAAGGAGACAAGAGA+GGG | - | chr7_4:22184133-22184152 | None:intergenic | 40.0% | |
TAGTAGTGATGGCATACGAA+GGG | - | chr7_4:22184219-22184238 | None:intergenic | 40.0% | |
ATAGTAGTGATGGCATACGA+AGG | - | chr7_4:22184220-22184239 | None:intergenic | 40.0% | |
ATCCTCTACCATCATATGGT+AGG | + | chr7_4:22184373-22184392 | Msa1145380:CDS | 40.0% | |
TCCTCTACCATCATATGGTA+GGG | + | chr7_4:22184374-22184393 | Msa1145380:CDS | 40.0% | |
GGCATAGAAGCCTCATTTAT+GGG | + | chr7_4:22184418-22184437 | Msa1145380:CDS | 40.0% | |
GTTCCATTGTTGCCTACATT+GGG | - | chr7_4:22184553-22184572 | None:intergenic | 40.0% | |
AGTTCCATTGTTGCCTACAT+TGG | - | chr7_4:22184554-22184573 | None:intergenic | 40.0% | |
GGCAACAATGGAACTATAGA+TGG | + | chr7_4:22184559-22184578 | Msa1145380:intron | 40.0% | |
CAATGGAACTATAGATGGTC+AGG | + | chr7_4:22184564-22184583 | Msa1145380:CDS | 40.0% | |
ATGGAACTATAGATGGTCAG+GGG | + | chr7_4:22184566-22184585 | Msa1145380:CDS | 40.0% | |
ACGGGATGAATAGTCCAAAA+TGG | - | chr7_4:22184706-22184725 | None:intergenic | 40.0% | |
CTATTCATCCCGTATATTGC+AGG | + | chr7_4:22184713-22184732 | Msa1145380:CDS | 40.0% | |
!!! | CAGGTTTTGTTCTCTTCAGA+AGG | + | chr7_4:22184732-22184751 | Msa1145380:intron | 40.0% |
GGATCAATCCCATCTGTATT+TGG | - | chr7_4:22184912-22184931 | None:intergenic | 40.0% | |
AATACAGATGGGATTGATCC+AGG | + | chr7_4:22184912-22184931 | Msa1145380:CDS | 40.0% | |
CCTAAGGAAGAAAATTCACC+TGG | - | chr7_4:22184933-22184952 | None:intergenic | 40.0% | |
! | CCAGGTGAATTTTCTTCCTT+AGG | + | chr7_4:22184930-22184949 | Msa1145380:intron | 40.0% |
! | GTGAATTTTCTTCCTTAGGC+TGG | + | chr7_4:22184934-22184953 | Msa1145380:intron | 40.0% |
!!! | CTTTTTGGGTCCAAATGAAC+AGG | - | chr7_4:22185022-22185041 | None:intergenic | 40.0% |
CTGTTCATTTGGACCCAAAA+AGG | + | chr7_4:22185020-22185039 | Msa1145380:intron | 40.0% | |
! | TTGGACCCAAAAAGGCATAA+AGG | + | chr7_4:22185028-22185047 | Msa1145380:intron | 40.0% |
TGTCATCTGTCAACTATGCT+AGG | - | chr7_4:22185118-22185137 | None:intergenic | 40.0% | |
GAAGACTGTTATATGAGCAC+CGG | + | chr7_4:22185242-22185261 | Msa1145380:CDS | 40.0% | |
GATGGAAATTAGATCATCGC+CGG | - | chr7_4:22185264-22185283 | None:intergenic | 40.0% | |
!! | TTCATCCCATCCACTTTTGA+TGG | - | chr7_4:22185282-22185301 | None:intergenic | 40.0% |
CCAAGGTGATGTTAGAGATA+TGG | - | chr7_4:22185508-22185527 | None:intergenic | 40.0% | |
CCATATCTCTAACATCACCT+TGG | + | chr7_4:22185505-22185524 | Msa1145380:CDS | 40.0% | |
TACTGTCGAGAATGTGATAG+GGG | + | chr7_4:22185622-22185641 | Msa1145380:CDS | 40.0% | |
! | GGCCTGATACAAGGTATTAA+AGG | + | chr7_4:22185662-22185681 | Msa1145380:CDS | 40.0% |
! | ATACTCTGAATTGGTTTCCC+CGG | + | chr7_4:22185769-22185788 | Msa1145380:CDS | 40.0% |
TCAGTTTAGTGGTAAGTGCA+GGG | + | chr7_4:22186080-22186099 | Msa1145380:three_prime_UTR | 40.0% | |
CTCCGAATTCTCTACTCCAT+CGG | + | chr7_4:22182349-22182368 | Msa1145380:five_prime_UTR | 45.0% | |
CTCCGATGGAGTAGAGAATT+CGG | - | chr7_4:22182354-22182373 | None:intergenic | 45.0% | |
ACCGTCACTCTTGCTAAAAG+AGG | + | chr7_4:22182894-22182913 | Msa1145380:intron | 45.0% | |
!! | AGCTCAACTGGTTTGAGCTA+AGG | + | chr7_4:22183131-22183150 | Msa1145380:intron | 45.0% |
!! | GCTCAACTGGTTTGAGCTAA+GGG | + | chr7_4:22183132-22183151 | Msa1145380:intron | 45.0% |
! | CTGGTTTGAGCTAAGGGTTA+AGG | + | chr7_4:22183138-22183157 | Msa1145380:intron | 45.0% |
TGAGCTAAGGGTTAAGGAGA+TGG | + | chr7_4:22183144-22183163 | Msa1145380:intron | 45.0% | |
GCAACGAGAGAAGGATATAG+AGG | - | chr7_4:22183266-22183285 | None:intergenic | 45.0% | |
TCTTCAACTGCAACGAGAGA+AGG | - | chr7_4:22183275-22183294 | None:intergenic | 45.0% | |
! | AGCATATGAACTGCTGGTTG+TGG | + | chr7_4:22183295-22183314 | Msa1145380:intron | 45.0% |
! | CACTTAGAAGCGTATCAACG+TGG | - | chr7_4:22183345-22183364 | None:intergenic | 45.0% |
!! | GCAGCTAGTGGATGTGTTTT+TGG | + | chr7_4:22183390-22183409 | Msa1145380:intron | 45.0% |
! | GAATTTGGAGCAGTAGGAGA+TGG | + | chr7_4:22183514-22183533 | Msa1145380:CDS | 45.0% |
AATTCGTATGCCGACAAAGG+TGG | + | chr7_4:22183583-22183602 | Msa1145380:CDS | 45.0% | |
! | CAAAACTACCGGTTAACCAC+TGG | - | chr7_4:22183633-22183652 | None:intergenic | 45.0% |
TCATCAGCCATCTCACTTTG+TGG | + | chr7_4:22183656-22183675 | Msa1145380:CDS | 45.0% | |
TGTCCAACCACAAAGTGAGA+TGG | - | chr7_4:22183666-22183685 | None:intergenic | 45.0% | |
CGAAGCGTGAAAACAAACAC+TGG | - | chr7_4:22183896-22183915 | None:intergenic | 45.0% | |
GATAAGGAAGGAGACAAGAG+AGG | - | chr7_4:22184134-22184153 | None:intergenic | 45.0% | |
!! | CAAGTTTGTTGGACTCAAGC+CGG | - | chr7_4:22184268-22184287 | None:intergenic | 45.0% |
GTGGATCCTCTACCATCATA+TGG | + | chr7_4:22184369-22184388 | Msa1145380:CDS | 45.0% | |
CCTCTACCATCATATGGTAG+GGG | + | chr7_4:22184375-22184394 | Msa1145380:CDS | 45.0% | |
TACCATCATATGGTAGGGGA+AGG | + | chr7_4:22184379-22184398 | Msa1145380:CDS | 45.0% | |
ACCATCATATGGTAGGGGAA+GGG | + | chr7_4:22184380-22184399 | Msa1145380:CDS | 45.0% | |
CGGCATAGAAGCCTCATTTA+TGG | + | chr7_4:22184417-22184436 | Msa1145380:CDS | 45.0% | |
!! | TAGATGGTCAGGGGAGTATT+TGG | + | chr7_4:22184575-22184594 | Msa1145380:CDS | 45.0% |
! | GTCACAATCCTTGCTCCTTT+TGG | + | chr7_4:22184882-22184901 | Msa1145380:CDS | 45.0% |
TTGGTGAACCAAAAGGAGCA+AGG | - | chr7_4:22184893-22184912 | None:intergenic | 45.0% | |
ATTAACATCCACAGGCTCAC+CGG | + | chr7_4:22185335-22185354 | Msa1145380:CDS | 45.0% | |
AATAAAGACTTCTCCCGGGA+GGG | + | chr7_4:22185463-22185482 | Msa1145380:CDS | 45.0% | |
TTTAACATAACCACCCCTCC+CGG | - | chr7_4:22185480-22185499 | None:intergenic | 45.0% | |
TCTGGGTCATATGAGTCATC+TGG | - | chr7_4:22185578-22185597 | None:intergenic | 45.0% | |
! | TTGAGTTGCTCACAAGCTTC+CGG | - | chr7_4:22185791-22185810 | None:intergenic | 45.0% |
AGAGTTCGAGTAGTCGAAAC+AGG | + | chr7_4:22185867-22185886 | Msa1145380:CDS | 45.0% | |
GAGTTCGAGTAGTCGAAACA+GGG | + | chr7_4:22185868-22185887 | Msa1145380:CDS | 45.0% | |
GTCAGTTTAGTGGTAAGTGC+AGG | + | chr7_4:22186079-22186098 | Msa1145380:three_prime_UTR | 45.0% | |
CAGTTTAGTGGTAAGTGCAG+GGG | + | chr7_4:22186081-22186100 | Msa1145380:three_prime_UTR | 45.0% | |
!!! | ATTTTTTTTTTTTTTTGAAA+TGG | - | chr7_4:22183234-22183253 | None:intergenic | 5.0% |
CGAATTCTCTACTCCATCGG+AGG | + | chr7_4:22182352-22182371 | Msa1145380:five_prime_UTR | 50.0% | |
ATTCTCTACTCCATCGGAGG+TGG | + | chr7_4:22182355-22182374 | Msa1145380:five_prime_UTR | 50.0% | |
!! | TTTGGGGTTGGTAGCTCAAC+TGG | + | chr7_4:22183119-22183138 | Msa1145380:intron | 50.0% |
GCTAAGGGTTAAGGAGATGG+AGG | + | chr7_4:22183147-22183166 | Msa1145380:intron | 50.0% | |
GTTAAGGAGATGGAGGTCCT+GGG | + | chr7_4:22183154-22183173 | Msa1145380:intron | 50.0% | |
GTTGCAGCTCATGGACAGTT+TGG | + | chr7_4:22183428-22183447 | Msa1145380:CDS | 50.0% | |
AAGCTTGGCTCCACCTTTGT+CGG | - | chr7_4:22183596-22183615 | None:intergenic | 50.0% | |
CAGCCATCTCACTTTGTGGT+TGG | + | chr7_4:22183660-22183679 | Msa1145380:CDS | 50.0% | |
CGGCTTGAGTCCAACAAACT+TGG | + | chr7_4:22184266-22184285 | Msa1145380:intron | 50.0% | |
! | CTCTGAAGATTGGCCAGTTG+TGG | + | chr7_4:22184350-22184369 | Msa1145380:CDS | 50.0% |
GATGGTAGAGGATCCACAAC+TGG | - | chr7_4:22184366-22184385 | None:intergenic | 50.0% | |
CCCCTACCATATGATGGTAG+AGG | - | chr7_4:22184378-22184397 | None:intergenic | 50.0% | |
TCCCTTCCCCTACCATATGA+TGG | - | chr7_4:22184384-22184403 | None:intergenic | 50.0% | |
CGACCCAATGTAGGCAACAA+TGG | + | chr7_4:22184547-22184566 | Msa1145380:intron | 50.0% | |
!! | ATGGTCAGGGGAGTATTTGG+TGG | + | chr7_4:22184578-22184597 | Msa1145380:CDS | 50.0% |
TTAACATCCACAGGCTCACC+GGG | + | chr7_4:22185336-22185355 | Msa1145380:CDS | 50.0% | |
TCCAGACATCTCACTTCCGA+TGG | - | chr7_4:22185384-22185403 | None:intergenic | 50.0% | |
ATCGGAAGTGAGATGTCTGG+AGG | + | chr7_4:22185383-22185402 | Msa1145380:CDS | 50.0% | |
GAATAAAGACTTCTCCCGGG+AGG | + | chr7_4:22185462-22185481 | Msa1145380:CDS | 50.0% | |
ATAAAGACTTCTCCCGGGAG+GGG | + | chr7_4:22185464-22185483 | Msa1145380:CDS | 50.0% | |
TTAACATAACCACCCCTCCC+GGG | - | chr7_4:22185479-22185498 | None:intergenic | 50.0% | |
AGGGGAAAACATCAAACGCG+CGG | + | chr7_4:22185640-22185659 | Msa1145380:CDS | 50.0% | |
TTAACGTCCGAGCAGTTCCA+TGG | - | chr7_4:22185746-22185765 | None:intergenic | 50.0% | |
TGGAACTGCTCGGACGTTAA+AGG | + | chr7_4:22185746-22185765 | Msa1145380:CDS | 50.0% | |
TGAGTTGCTCACAAGCTTCC+GGG | - | chr7_4:22185790-22185809 | None:intergenic | 50.0% | |
GTAGTCGAAACAGGGTTGCT+TGG | + | chr7_4:22185876-22185895 | Msa1145380:CDS | 50.0% | |
TGCTTGGTTGCAGTCTTGGT+AGG | + | chr7_4:22185892-22185911 | Msa1145380:CDS | 50.0% | |
GTGCAGGGGACTAATAACCA+TGG | + | chr7_4:22186095-22186114 | Msa1145380:three_prime_UTR | 50.0% | |
! | TTTTGCAGAGCCACCTCCGA+TGG | - | chr7_4:22182368-22182387 | None:intergenic | 55.0% |
GGTTAAGGAGATGGAGGTCC+TGG | + | chr7_4:22183153-22183172 | Msa1145380:intron | 55.0% | |
!! | CCTTCGTCAGGTTTTGACCC+AGG | - | chr7_4:22183174-22183193 | None:intergenic | 55.0% |
CCTGGGTCAAAACCTGACGA+AGG | + | chr7_4:22183171-22183190 | Msa1145380:intron | 55.0% | |
! | GCCAAGCTTTTTGTCCCTGC+TGG | + | chr7_4:22183607-22183626 | Msa1145380:CDS | 55.0% |
GCCAGCAGGGACAAAAAGCT+TGG | - | chr7_4:22183611-22183630 | None:intergenic | 55.0% | |
! | TTTTTGTCCCTGCTGGCCAG+TGG | + | chr7_4:22183614-22183633 | Msa1145380:CDS | 55.0% |
!! | TGCCACGTTTGGTTTGACGG+CGG | - | chr7_4:22183965-22183984 | None:intergenic | 55.0% |
GCCATTTGGCGACCCAATGT+AGG | + | chr7_4:22184538-22184557 | Msa1145380:intron | 55.0% | |
GCCTACATTGGGTCGCCAAA+TGG | - | chr7_4:22184542-22184561 | None:intergenic | 55.0% | |
GGGTATGGCATTCCAGCCTA+AGG | - | chr7_4:22184949-22184968 | None:intergenic | 55.0% | |
CTCACTTCCGATGGCGATTC+CGG | - | chr7_4:22185375-22185394 | None:intergenic | 55.0% | |
GCCATCGGAAGTGAGATGTC+TGG | + | chr7_4:22185380-22185399 | Msa1145380:CDS | 55.0% | |
GGGGAAAACATCAAACGCGC+GGG | + | chr7_4:22185641-22185660 | Msa1145380:CDS | 55.0% | |
GAGTTGCTCACAAGCTTCCG+GGG | - | chr7_4:22185789-22185808 | None:intergenic | 55.0% | |
GGGTTGCTTGGTTGCAGTCT+TGG | + | chr7_4:22185888-22185907 | Msa1145380:CDS | 55.0% | |
! | CGGAGGTGGCTCTGCAAAAC+AGG | + | chr7_4:22182369-22182388 | Msa1145380:five_prime_UTR | 60.0% |
CGGTTAACCACTGGCCAGCA+GGG | - | chr7_4:22183624-22183643 | None:intergenic | 60.0% | |
CCTGCTGGCCAGTGGTTAAC+CGG | + | chr7_4:22183622-22183641 | Msa1145380:CDS | 60.0% | |
!! | CACGTTTGGTTTGACGGCGG+GGG | - | chr7_4:22183962-22183981 | None:intergenic | 60.0% |
!! | CCACGTTTGGTTTGACGGCG+GGG | - | chr7_4:22183963-22183982 | None:intergenic | 60.0% |
!! | GCCACGTTTGGTTTGACGGC+GGG | - | chr7_4:22183964-22183983 | None:intergenic | 60.0% |
GAAGGGAGTTGCCAGGTGGA+CGG | + | chr7_4:22184397-22184416 | Msa1145380:CDS | 60.0% | |
AGGCTTCTATGCCGTCCACC+TGG | - | chr7_4:22184411-22184430 | None:intergenic | 60.0% | |
!! | ACGAGTGCCGGAATCGCCAT+CGG | + | chr7_4:22185365-22185384 | Msa1145380:CDS | 60.0% |
AAACGCGCGGGCCTGATACA+AGG | + | chr7_4:22185653-22185672 | Msa1145380:CDS | 60.0% | |
CCGGTTAACCACTGGCCAGC+AGG | - | chr7_4:22183625-22183644 | None:intergenic | 65.0% | |
CCCCGCCGTCAAACCAAACG+TGG | + | chr7_4:22183960-22183979 | Msa1145380:intron | 65.0% | |
GGTAGGGGAAGGGAGTTGCC+AGG | + | chr7_4:22184390-22184409 | Msa1145380:CDS | 65.0% | |
AGGGGAAGGGAGTTGCCAGG+TGG | + | chr7_4:22184393-22184412 | Msa1145380:CDS | 65.0% | |
ACATCCACAGGCTCACCGGG+AGG | + | chr7_4:22185339-22185358 | Msa1145380:CDS | 65.0% | |
TTGTCCTCCCGGTGAGCCTG+TGG | - | chr7_4:22185346-22185365 | None:intergenic | 65.0% | |
ACCGGGAGGACAACGAGTGC+CGG | + | chr7_4:22185353-22185372 | Msa1145380:CDS | 65.0% | |
TCCGGCACTCGTTGTCCTCC+CGG | - | chr7_4:22185357-22185376 | None:intergenic | 65.0% | |
AAGACTTCTCCCGGGAGGGG+TGG | + | chr7_4:22185467-22185486 | Msa1145380:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 22182279 | 22186158 | 22182279 | ID=Msa1145380;Name=Msa1145380 |
chr7_4 | mRNA | 22182279 | 22186158 | 22182279 | ID=Msa1145380-mRNA-1;Parent=Msa1145380;Name=Msa1145380-mRNA-1;_AED=0.08;_eAED=0.08;_QI=124|1|1|1|0.8|0.83|6|245|465 |
chr7_4 | exon | 22182279 | 22182420 | 22182279 | ID=Msa1145380-mRNA-1:exon:5398;Parent=Msa1145380-mRNA-1 |
chr7_4 | exon | 22183394 | 22183711 | 22183394 | ID=Msa1145380-mRNA-1:exon:5399;Parent=Msa1145380-mRNA-1 |
chr7_4 | exon | 22184348 | 22184468 | 22184348 | ID=Msa1145380-mRNA-1:exon:5400;Parent=Msa1145380-mRNA-1 |
chr7_4 | exon | 22184560 | 22184734 | 22184560 | ID=Msa1145380-mRNA-1:exon:5401;Parent=Msa1145380-mRNA-1 |
chr7_4 | exon | 22184863 | 22184933 | 22184863 | ID=Msa1145380-mRNA-1:exon:5402;Parent=Msa1145380-mRNA-1 |
chr7_4 | exon | 22185219 | 22186158 | 22185219 | ID=Msa1145380-mRNA-1:exon:5403;Parent=Msa1145380-mRNA-1 |
chr7_4 | five_prime_UTR | 22182279 | 22182402 | 22182279 | ID=Msa1145380-mRNA-1:five_prime_utr;Parent=Msa1145380-mRNA-1 |
chr7_4 | CDS | 22182403 | 22182420 | 22182403 | ID=Msa1145380-mRNA-1:cds;Parent=Msa1145380-mRNA-1 |
chr7_4 | CDS | 22183394 | 22183711 | 22183394 | ID=Msa1145380-mRNA-1:cds;Parent=Msa1145380-mRNA-1 |
chr7_4 | CDS | 22184348 | 22184468 | 22184348 | ID=Msa1145380-mRNA-1:cds;Parent=Msa1145380-mRNA-1 |
chr7_4 | CDS | 22184560 | 22184734 | 22184560 | ID=Msa1145380-mRNA-1:cds;Parent=Msa1145380-mRNA-1 |
chr7_4 | CDS | 22184863 | 22184933 | 22184863 | ID=Msa1145380-mRNA-1:cds;Parent=Msa1145380-mRNA-1 |
chr7_4 | CDS | 22185219 | 22185913 | 22185219 | ID=Msa1145380-mRNA-1:cds;Parent=Msa1145380-mRNA-1 |
chr7_4 | three_prime_UTR | 22185914 | 22186158 | 22185914 | ID=Msa1145380-mRNA-1:three_prime_utr;Parent=Msa1145380-mRNA-1 |
Gene Sequence |
Protein sequence |