Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173840 | XP_013469148.2 | 90.538 | 465 | 31 | 2 | 1 | 452 | 7 | 471 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173840 | sp|A7PZL3|PGLR_VITVI | 53.401 | 397 | 180 | 3 | 38 | 430 | 71 | 466 | 5.61e-152 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173840 | A0A396K3J2 | 90.538 | 465 | 31 | 2 | 1 | 452 | 7 | 471 | 0.0 | 834 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0173840 | 0.804881 | 1.745708e-49 | -8.615850e-47 |
| Msa0002580 | Msa0173840 | 0.828866 | 7.082573e-55 | -8.615850e-47 |
| Msa0030390 | Msa0173840 | 0.986616 | 2.189964e-167 | -8.615850e-47 |
| Msa0077340 | Msa0173840 | 0.801290 | 9.654757e-49 | -8.615850e-47 |
| Msa0173750 | Msa0173840 | 0.992110 | 2.331149e-191 | -8.615850e-47 |
| Msa0173840 | Msa0175930 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa0173840 | Msa0221000 | 0.809671 | 1.686528e-50 | -8.615850e-47 |
| Msa0173840 | Msa0225480 | 0.807345 | 5.290326e-50 | -8.615850e-47 |
| Msa0173840 | Msa0230800 | 0.802856 | 4.599345e-49 | -8.615850e-47 |
| Msa0173840 | Msa0244640 | 0.802210 | 6.250080e-49 | -8.615850e-47 |
| Msa0173840 | Msa0321620 | 0.812522 | 4.064216e-51 | -8.615850e-47 |
| Msa0173840 | Msa0426430 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
| Msa0173840 | Msa0428920 | 0.817977 | 2.492338e-52 | -8.615850e-47 |
| Msa0173840 | Msa0436910 | 0.832380 | 9.770955e-56 | -8.615850e-47 |
| Msa0173840 | Msa0529030 | 0.814465 | 1.519929e-51 | -8.615850e-47 |
| Msa0173840 | Msa0600930 | 0.822512 | 2.277367e-53 | -8.615850e-47 |
| Msa0173840 | Msa0829330 | 0.805750 | 1.147980e-49 | -8.615850e-47 |
| Msa0173840 | Msa0835490 | 0.807782 | 4.272006e-50 | -8.615850e-47 |
| Msa0173840 | Msa1145380 | 0.889994 | 1.470473e-73 | -8.615850e-47 |
| Msa0173840 | Msa1170760 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0173840 | Msa1208950 | 0.802615 | 5.157511e-49 | -8.615850e-47 |
| Msa0173840 | Msa1265650 | 0.830571 | 2.725358e-55 | -8.615850e-47 |
| Msa0173840 | Msa1303560 | 0.832383 | 9.752744e-56 | -8.615850e-47 |
| Msa0173840 | Msa1303650 | 0.831923 | 1.267858e-55 | -8.615850e-47 |
| Msa0173840 | Msa1372040 | 0.819625 | 1.052684e-52 | -8.615850e-47 |
| Msa0173840 | Msa1405460 | 0.817098 | 3.932005e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173840 | MtrunA17_Chr1g0193961 | 90.538 | 465 | 31 | 2 | 1 | 452 | 7 | 471 | 0.0 | 834 |
| Msa0173840 | MtrunA17_Chr7g0270821 | 79.912 | 453 | 83 | 2 | 1 | 445 | 7 | 459 | 0.0 | 754 |
| Msa0173840 | MtrunA17_Chr2g0295241 | 54.545 | 396 | 170 | 3 | 33 | 418 | 33 | 428 | 6.47e-156 | 449 |
| Msa0173840 | MtrunA17_Chr8g0387391 | 51.559 | 417 | 193 | 4 | 19 | 427 | 34 | 449 | 3.49e-155 | 448 |
| Msa0173840 | MtrunA17_Chr4g0067811 | 54.660 | 397 | 170 | 3 | 33 | 419 | 36 | 432 | 2.68e-154 | 445 |
| Msa0173840 | MtrunA17_Chr3g0095221 | 54.897 | 388 | 171 | 1 | 38 | 421 | 55 | 442 | 1.21e-152 | 441 |
| Msa0173840 | MtrunA17_Chr1g0202651 | 54.897 | 388 | 171 | 2 | 38 | 421 | 63 | 450 | 8.21e-151 | 437 |
| Msa0173840 | MtrunA17_Chr8g0348491 | 52.019 | 421 | 187 | 4 | 33 | 438 | 51 | 471 | 2.41e-148 | 431 |
| Msa0173840 | MtrunA17_Chr7g0255311 | 54.731 | 391 | 170 | 3 | 38 | 421 | 71 | 461 | 4.21e-148 | 431 |
| Msa0173840 | MtrunA17_Chr7g0248451 | 52.645 | 397 | 183 | 3 | 38 | 430 | 63 | 458 | 5.82e-148 | 430 |
| Msa0173840 | MtrunA17_Chr3g0130251 | 53.181 | 393 | 182 | 2 | 29 | 419 | 75 | 467 | 8.20e-142 | 414 |
| Msa0173840 | MtrunA17_Chr1g0202641 | 53.728 | 389 | 176 | 2 | 37 | 421 | 62 | 450 | 3.67e-141 | 428 |
| Msa0173840 | MtrunA17_Chr1g0202641 | 53.608 | 388 | 176 | 2 | 38 | 421 | 563 | 950 | 4.90e-138 | 420 |
| Msa0173840 | MtrunA17_Chr5g0442221 | 55.297 | 387 | 167 | 2 | 38 | 418 | 52 | 438 | 7.56e-141 | 411 |
| Msa0173840 | MtrunA17_Chr4g0070281 | 47.126 | 435 | 210 | 7 | 1 | 420 | 41 | 470 | 6.25e-136 | 400 |
| Msa0173840 | MtrunA17_Chr1g0202621 | 50.386 | 389 | 183 | 3 | 37 | 421 | 55 | 437 | 9.42e-136 | 398 |
| Msa0173840 | MtrunA17_Chr2g0301091 | 48.309 | 414 | 199 | 7 | 19 | 421 | 46 | 455 | 4.07e-133 | 392 |
| Msa0173840 | MtrunA17_Chr2g0319881 | 85.549 | 173 | 18 | 1 | 1 | 166 | 7 | 179 | 2.32e-97 | 290 |
| Msa0173840 | MtrunA17_Chr5g0418411 | 37.004 | 227 | 122 | 6 | 123 | 344 | 112 | 322 | 3.85e-27 | 112 |
| Msa0173840 | MtrunA17_Chr2g0319871 | 70.312 | 64 | 19 | 0 | 172 | 235 | 1 | 64 | 2.67e-23 | 92.8 |
| Msa0173840 | MtrunA17_Chr3g0121891 | 30.769 | 234 | 140 | 5 | 137 | 366 | 126 | 341 | 3.20e-22 | 98.2 |
| Msa0173840 | MtrunA17_Chr8g0337571 | 32.653 | 196 | 112 | 4 | 136 | 327 | 121 | 300 | 1.63e-21 | 95.9 |
| Msa0173840 | MtrunA17_Chr8g0365901 | 28.955 | 335 | 197 | 12 | 39 | 363 | 74 | 377 | 2.93e-21 | 95.9 |
| Msa0173840 | MtrunA17_Chr3g0100091 | 35.149 | 202 | 107 | 6 | 133 | 328 | 77 | 260 | 3.11e-21 | 94.7 |
| Msa0173840 | MtrunA17_Chr7g0258111 | 26.899 | 316 | 184 | 8 | 32 | 333 | 50 | 332 | 8.99e-21 | 94.7 |
| Msa0173840 | MtrunA17_Chr4g0043661 | 28.763 | 299 | 173 | 8 | 132 | 413 | 115 | 390 | 1.20e-20 | 93.6 |
| Msa0173840 | MtrunA17_Chr6g0449961 | 33.014 | 209 | 121 | 5 | 133 | 337 | 133 | 326 | 1.43e-20 | 93.6 |
| Msa0173840 | MtrunA17_Chr3g0121881 | 29.452 | 292 | 173 | 8 | 132 | 412 | 125 | 394 | 2.65e-20 | 92.4 |
| Msa0173840 | MtrunA17_Chr5g0413141 | 28.481 | 316 | 187 | 10 | 143 | 433 | 156 | 457 | 3.17e-19 | 89.7 |
| Msa0173840 | MtrunA17_Chr7g0230891 | 26.097 | 433 | 249 | 17 | 7 | 415 | 14 | 399 | 3.51e-19 | 89.4 |
| Msa0173840 | MtrunA17_Chr1g0150291 | 25.467 | 428 | 263 | 13 | 1 | 414 | 22 | 407 | 1.12e-18 | 87.8 |
| Msa0173840 | MtrunA17_Chr6g0468871 | 53.247 | 77 | 35 | 1 | 223 | 298 | 22 | 98 | 1.51e-18 | 80.5 |
| Msa0173840 | MtrunA17_Chr8g0336481 | 29.787 | 235 | 127 | 7 | 136 | 361 | 43 | 248 | 2.81e-18 | 84.7 |
| Msa0173840 | MtrunA17_Chr4g0020771 | 29.614 | 233 | 138 | 7 | 143 | 363 | 168 | 386 | 9.36e-18 | 85.1 |
| Msa0173840 | MtrunA17_Chr8g0337581 | 31.628 | 215 | 125 | 6 | 135 | 344 | 121 | 318 | 1.86e-17 | 84.0 |
| Msa0173840 | MtrunA17_Chr2g0332971 | 30.392 | 204 | 122 | 5 | 130 | 325 | 115 | 306 | 2.88e-17 | 83.6 |
| Msa0173840 | MtrunA17_Chr5g0413411 | 25.595 | 336 | 181 | 10 | 39 | 337 | 130 | 433 | 3.72e-17 | 84.0 |
| Msa0173840 | MtrunA17_Chr3g0089021 | 29.259 | 270 | 158 | 7 | 104 | 367 | 138 | 380 | 3.79e-17 | 83.6 |
| Msa0173840 | MtrunA17_Chr2g0332801 | 31.466 | 232 | 133 | 7 | 121 | 341 | 136 | 352 | 4.29e-17 | 83.2 |
| Msa0173840 | MtrunA17_Chr4g0052621 | 28.228 | 333 | 191 | 11 | 20 | 337 | 59 | 358 | 1.16e-16 | 82.0 |
| Msa0173840 | MtrunA17_Chr7g0270361 | 26.722 | 363 | 199 | 13 | 29 | 367 | 66 | 385 | 1.49e-16 | 81.6 |
| Msa0173840 | MtrunA17_Chr8g0337601 | 32.941 | 170 | 98 | 3 | 179 | 344 | 12 | 169 | 4.67e-16 | 77.4 |
| Msa0173840 | MtrunA17_Chr1g0150301 | 24.057 | 424 | 274 | 12 | 1 | 414 | 4 | 389 | 6.48e-16 | 79.3 |
| Msa0173840 | MtrunA17_Chr6g0461181 | 23.853 | 436 | 253 | 15 | 21 | 405 | 15 | 422 | 8.05e-16 | 79.3 |
| Msa0173840 | MtrunA17_Chr4g0018151 | 25.761 | 427 | 262 | 13 | 1 | 412 | 49 | 435 | 8.87e-16 | 79.3 |
| Msa0173840 | MtrunA17_Chr4g0043431 | 27.859 | 341 | 204 | 13 | 40 | 371 | 45 | 352 | 9.08e-16 | 79.0 |
| Msa0173840 | MtrunA17_Chr8g0365891 | 28.014 | 282 | 136 | 8 | 92 | 337 | 170 | 420 | 2.36e-15 | 78.2 |
| Msa0173840 | MtrunA17_Chr1g0194231 | 27.077 | 325 | 189 | 8 | 31 | 337 | 82 | 376 | 3.65e-15 | 77.4 |
| Msa0173840 | MtrunA17_Chr2g0303941 | 32.212 | 208 | 118 | 6 | 143 | 342 | 122 | 314 | 7.56e-15 | 75.9 |
| Msa0173840 | MtrunA17_Chr7g0228411 | 27.859 | 341 | 189 | 12 | 28 | 339 | 38 | 350 | 1.74e-13 | 72.0 |
| Msa0173840 | MtrunA17_Chr1g0173451 | 27.551 | 294 | 172 | 11 | 143 | 420 | 172 | 440 | 4.99e-13 | 70.9 |
| Msa0173840 | MtrunA17_Chr8g0337511 | 31.737 | 167 | 102 | 3 | 176 | 340 | 12 | 168 | 8.72e-13 | 68.2 |
| Msa0173840 | MtrunA17_Chr2g0293681 | 28.704 | 216 | 129 | 5 | 135 | 337 | 157 | 360 | 2.32e-12 | 68.6 |
| Msa0173840 | MtrunA17_Chr7g0257701 | 28.718 | 195 | 119 | 4 | 137 | 327 | 191 | 369 | 2.47e-12 | 68.6 |
| Msa0173840 | MtrunA17_Chr1g0195221 | 29.108 | 213 | 131 | 5 | 135 | 339 | 124 | 324 | 2.58e-12 | 68.2 |
| Msa0173840 | MtrunA17_Chr4g0067631 | 24.752 | 303 | 182 | 11 | 39 | 327 | 61 | 331 | 5.47e-12 | 67.4 |
| Msa0173840 | MtrunA17_Chr1g0149241 | 23.333 | 330 | 218 | 8 | 1 | 327 | 5 | 302 | 7.67e-12 | 66.6 |
| Msa0173840 | MtrunA17_Chr6g0468861 | 43.750 | 64 | 35 | 1 | 333 | 395 | 12 | 75 | 5.11e-11 | 58.5 |
| Msa0173840 | MtrunA17_Chr2g0291841 | 26.174 | 298 | 188 | 12 | 132 | 415 | 82 | 361 | 6.24e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173840 | AT3G62110.1 | 67.238 | 467 | 136 | 8 | 1 | 452 | 7 | 471 | 0.0 | 625 |
| Msa0173840 | AT3G62110.2 | 67.238 | 467 | 136 | 8 | 1 | 452 | 7 | 471 | 0.0 | 625 |
| Msa0173840 | AT4G23820.1 | 53.052 | 426 | 191 | 2 | 2 | 418 | 6 | 431 | 6.59e-156 | 449 |
| Msa0173840 | AT4G23500.1 | 52.826 | 407 | 187 | 3 | 19 | 421 | 58 | 463 | 1.44e-154 | 447 |
| Msa0173840 | AT4G33440.1 | 55.440 | 386 | 170 | 2 | 38 | 421 | 80 | 465 | 5.43e-150 | 435 |
| Msa0173840 | AT3G61490.2 | 53.886 | 386 | 174 | 2 | 38 | 419 | 53 | 438 | 6.97e-150 | 435 |
| Msa0173840 | AT3G61490.3 | 53.886 | 386 | 174 | 2 | 38 | 419 | 53 | 438 | 6.97e-150 | 435 |
| Msa0173840 | AT3G61490.1 | 53.886 | 386 | 174 | 2 | 38 | 419 | 53 | 438 | 6.97e-150 | 435 |
| Msa0173840 | AT3G61490.5 | 53.886 | 386 | 174 | 2 | 38 | 419 | 68 | 453 | 1.25e-149 | 435 |
| Msa0173840 | AT3G61490.4 | 53.886 | 386 | 174 | 2 | 38 | 419 | 166 | 551 | 2.82e-149 | 437 |
| Msa0173840 | AT3G16850.1 | 49.770 | 434 | 204 | 4 | 24 | 448 | 27 | 455 | 4.44e-146 | 425 |
| Msa0173840 | AT5G41870.1 | 54.026 | 385 | 175 | 2 | 37 | 419 | 52 | 436 | 1.96e-145 | 423 |
| Msa0173840 | AT3G48950.1 | 49.640 | 417 | 198 | 4 | 33 | 437 | 41 | 457 | 4.79e-145 | 422 |
| Msa0173840 | AT5G49215.2 | 51.508 | 398 | 181 | 3 | 33 | 418 | 37 | 434 | 2.25e-140 | 410 |
| Msa0173840 | AT5G49215.1 | 51.508 | 398 | 181 | 3 | 33 | 418 | 39 | 436 | 2.93e-140 | 409 |
| Msa0173840 | AT2G23900.1 | 46.697 | 439 | 215 | 6 | 5 | 424 | 17 | 455 | 1.37e-136 | 401 |
| Msa0173840 | AT3G06770.2 | 50.000 | 398 | 189 | 3 | 33 | 420 | 39 | 436 | 3.56e-135 | 397 |
| Msa0173840 | AT3G06770.5 | 50.000 | 398 | 189 | 3 | 33 | 420 | 40 | 437 | 3.72e-135 | 396 |
| Msa0173840 | AT1G19170.1 | 47.826 | 391 | 192 | 6 | 38 | 419 | 95 | 482 | 3.36e-123 | 368 |
| Msa0173840 | AT3G42950.1 | 45.501 | 389 | 207 | 4 | 37 | 420 | 73 | 461 | 7.99e-123 | 366 |
| Msa0173840 | AT3G06770.1 | 48.907 | 366 | 184 | 2 | 58 | 420 | 2 | 367 | 4.67e-122 | 360 |
| Msa0173840 | AT3G06770.3 | 48.907 | 366 | 184 | 2 | 58 | 420 | 2 | 367 | 4.67e-122 | 360 |
| Msa0173840 | AT3G06770.4 | 45.115 | 348 | 183 | 3 | 81 | 420 | 2 | 349 | 4.46e-101 | 306 |
| Msa0173840 | AT3G57790.2 | 28.391 | 317 | 184 | 6 | 32 | 333 | 37 | 325 | 1.74e-28 | 117 |
| Msa0173840 | AT3G57790.1 | 28.391 | 317 | 184 | 6 | 32 | 333 | 37 | 325 | 1.74e-28 | 117 |
| Msa0173840 | AT3G15720.3 | 30.056 | 356 | 197 | 13 | 28 | 371 | 21 | 336 | 3.49e-26 | 110 |
| Msa0173840 | AT3G15720.1 | 30.056 | 356 | 197 | 13 | 28 | 371 | 22 | 337 | 3.52e-26 | 110 |
| Msa0173840 | AT3G15720.2 | 30.337 | 356 | 193 | 14 | 28 | 371 | 21 | 333 | 1.27e-24 | 106 |
| Msa0173840 | AT3G15720.4 | 32.794 | 247 | 140 | 7 | 133 | 371 | 45 | 273 | 1.33e-24 | 105 |
| Msa0173840 | AT5G14650.1 | 28.333 | 300 | 183 | 8 | 32 | 327 | 53 | 324 | 1.65e-22 | 99.8 |
| Msa0173840 | AT1G70500.1 | 28.035 | 346 | 208 | 11 | 28 | 363 | 65 | 379 | 6.16e-21 | 95.5 |
| Msa0173840 | AT4G32380.1 | 33.990 | 203 | 113 | 5 | 133 | 331 | 118 | 303 | 6.65e-21 | 95.1 |
| Msa0173840 | AT5G17200.1 | 28.763 | 299 | 175 | 8 | 31 | 325 | 40 | 304 | 2.41e-20 | 93.2 |
| Msa0173840 | AT3G26610.1 | 31.553 | 206 | 119 | 5 | 142 | 337 | 163 | 356 | 7.73e-20 | 92.0 |
| Msa0173840 | AT5G27530.1 | 26.316 | 380 | 227 | 12 | 39 | 407 | 62 | 399 | 9.12e-20 | 92.0 |
| Msa0173840 | AT1G60590.1 | 23.929 | 397 | 221 | 12 | 39 | 391 | 132 | 491 | 1.64e-19 | 91.7 |
| Msa0173840 | AT4G35670.2 | 35.354 | 198 | 108 | 5 | 133 | 326 | 8 | 189 | 1.72e-19 | 89.0 |
| Msa0173840 | AT4G35670.1 | 34.951 | 206 | 114 | 5 | 125 | 326 | 107 | 296 | 3.08e-19 | 89.7 |
| Msa0173840 | AT1G56710.1 | 29.052 | 327 | 188 | 9 | 29 | 339 | 47 | 345 | 8.18e-19 | 89.0 |
| Msa0173840 | AT1G23460.2 | 25.797 | 345 | 217 | 8 | 28 | 363 | 41 | 355 | 8.91e-19 | 88.6 |
| Msa0173840 | AT1G23460.1 | 26.361 | 349 | 210 | 10 | 28 | 363 | 65 | 379 | 1.15e-18 | 88.6 |
| Msa0173840 | AT1G10640.1 | 25.000 | 396 | 215 | 12 | 39 | 391 | 128 | 484 | 1.16e-18 | 89.0 |
| Msa0173840 | AT5G14650.2 | 26.882 | 279 | 172 | 8 | 32 | 306 | 53 | 303 | 2.67e-18 | 85.9 |
| Msa0173840 | AT2G15460.1 | 26.121 | 379 | 236 | 10 | 5 | 371 | 6 | 352 | 6.36e-18 | 85.9 |
| Msa0173840 | AT3G57510.1 | 27.027 | 370 | 210 | 14 | 39 | 397 | 77 | 397 | 7.65e-18 | 85.9 |
| Msa0173840 | AT2G15470.1 | 26.684 | 386 | 225 | 14 | 5 | 371 | 6 | 352 | 1.57e-17 | 84.7 |
| Msa0173840 | AT5G44840.1 | 32.796 | 186 | 106 | 4 | 143 | 324 | 124 | 294 | 2.63e-17 | 84.0 |
| Msa0173840 | AT2G15450.1 | 25.722 | 381 | 235 | 11 | 5 | 371 | 6 | 352 | 9.13e-17 | 82.4 |
| Msa0173840 | AT1G80170.1 | 25.220 | 341 | 219 | 8 | 39 | 371 | 62 | 374 | 2.67e-16 | 81.3 |
| Msa0173840 | AT1G17150.1 | 24.672 | 381 | 237 | 11 | 4 | 371 | 8 | 351 | 3.45e-16 | 80.5 |
| Msa0173840 | AT2G26620.1 | 26.230 | 366 | 223 | 10 | 18 | 371 | 20 | 350 | 3.95e-16 | 80.5 |
| Msa0173840 | AT2G43880.2 | 28.896 | 308 | 173 | 10 | 31 | 328 | 32 | 303 | 4.29e-16 | 79.7 |
| Msa0173840 | AT2G41850.1 | 29.866 | 298 | 171 | 9 | 39 | 327 | 77 | 345 | 5.06e-16 | 80.5 |
| Msa0173840 | AT2G43880.1 | 26.131 | 398 | 245 | 13 | 31 | 415 | 32 | 393 | 5.13e-16 | 80.1 |
| Msa0173840 | AT5G44830.1 | 31.720 | 186 | 98 | 5 | 143 | 324 | 75 | 235 | 8.15e-16 | 79.0 |
| Msa0173840 | AT4G32375.1 | 32.524 | 206 | 114 | 7 | 132 | 331 | 18 | 204 | 9.34e-16 | 79.3 |
| Msa0173840 | AT1G02460.1 | 26.899 | 316 | 188 | 7 | 29 | 327 | 88 | 377 | 1.96e-15 | 79.0 |
| Msa0173840 | AT4G32380.2 | 31.553 | 206 | 119 | 6 | 133 | 333 | 118 | 306 | 3.00e-15 | 77.8 |
| Msa0173840 | AT4G13760.1 | 24.422 | 389 | 239 | 13 | 1 | 371 | 1 | 352 | 3.51e-15 | 77.4 |
| Msa0173840 | AT3G07970.1 | 29.134 | 254 | 151 | 7 | 123 | 367 | 148 | 381 | 3.55e-15 | 77.8 |
| Msa0173840 | AT1G48100.1 | 25.915 | 328 | 201 | 9 | 29 | 342 | 79 | 378 | 3.66e-15 | 77.8 |
| Msa0173840 | AT4G32370.1 | 28.740 | 254 | 152 | 9 | 111 | 356 | 110 | 342 | 9.55e-14 | 72.8 |
| Msa0173840 | AT1G78400.1 | 25.063 | 399 | 253 | 14 | 31 | 415 | 36 | 402 | 1.02e-13 | 73.2 |
| Msa0173840 | AT1G02790.1 | 24.425 | 348 | 216 | 9 | 29 | 368 | 51 | 359 | 1.18e-13 | 73.2 |
| Msa0173840 | AT1G80140.1 | 30.049 | 203 | 122 | 5 | 143 | 341 | 70 | 256 | 1.24e-13 | 72.4 |
| Msa0173840 | AT4G01890.1 | 25.161 | 310 | 191 | 8 | 29 | 322 | 64 | 348 | 1.75e-13 | 72.8 |
| Msa0173840 | AT1G80170.2 | 26.449 | 276 | 167 | 8 | 39 | 306 | 62 | 309 | 2.91e-13 | 71.2 |
| Msa0173840 | AT3G14040.1 | 26.059 | 307 | 203 | 9 | 124 | 418 | 146 | 440 | 3.99e-13 | 71.6 |
| Msa0173840 | AT2G40310.1 | 23.760 | 383 | 249 | 12 | 1 | 371 | 1 | 352 | 5.91e-13 | 70.9 |
| Msa0173840 | AT1G43080.1 | 25.134 | 374 | 239 | 11 | 1 | 363 | 1 | 344 | 7.81e-13 | 70.5 |
| Msa0173840 | AT2G43870.1 | 27.027 | 222 | 143 | 4 | 128 | 348 | 104 | 307 | 1.22e-12 | 69.7 |
| Msa0173840 | AT1G65570.1 | 27.609 | 297 | 182 | 10 | 131 | 415 | 121 | 396 | 1.58e-12 | 69.3 |
| Msa0173840 | AT1G43100.1 | 25.333 | 375 | 237 | 12 | 1 | 363 | 1 | 344 | 1.75e-12 | 69.3 |
| Msa0173840 | AT3G07850.1 | 25.407 | 307 | 205 | 9 | 124 | 418 | 145 | 439 | 4.01e-12 | 68.2 |
| Msa0173840 | AT1G43090.1 | 24.866 | 374 | 240 | 11 | 1 | 363 | 1 | 344 | 6.71e-12 | 67.8 |
| Msa0173840 | AT1G05650.1 | 25.000 | 280 | 193 | 7 | 143 | 415 | 122 | 391 | 8.06e-12 | 67.0 |
| Msa0173840 | AT5G48140.1 | 30.412 | 194 | 113 | 7 | 143 | 327 | 113 | 293 | 9.86e-12 | 67.0 |
| Msa0173840 | AT2G43890.1 | 26.408 | 284 | 183 | 10 | 143 | 415 | 123 | 391 | 1.15e-11 | 66.6 |
| Msa0173840 | AT4G18180.1 | 30.366 | 191 | 117 | 5 | 143 | 327 | 137 | 317 | 1.78e-11 | 66.2 |
| Msa0173840 | AT3G59850.1 | 25.237 | 317 | 207 | 7 | 40 | 354 | 33 | 321 | 2.33e-11 | 65.9 |
| Msa0173840 | AT3G59850.2 | 25.430 | 291 | 189 | 6 | 40 | 328 | 77 | 341 | 4.27e-11 | 65.1 |
Find 132 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTGAATTCACCATTT+TGG | 0.176069 | 1_4:-59183415 | Msa0173840:CDS |
| TTTATCACAGGTAGAGTATC+TGG | 0.180895 | 1_4:+59182511 | None:intergenic |
| TTCAAGTATCTTTGAACTTT+TGG | 0.194110 | 1_4:+59182161 | None:intergenic |
| CTTTGTCGGCATACGAATTT+AGG | 0.216480 | 1_4:+59184525 | None:intergenic |
| GTCACAATCCTTGCTCCTTT+TGG | 0.216904 | 1_4:-59183222 | Msa0173840:CDS |
| ACTGACTATTGTTATGATTA+AGG | 0.221969 | 1_4:-59181973 | Msa0173840:three_prime_UTR |
| ATTAGATTCACTGGTTTATA+TGG | 0.231131 | 1_4:-59182559 | Msa0173840:CDS |
| CACCTTTAATACCTTGTATC+AGG | 0.254668 | 1_4:+59182440 | None:intergenic |
| GGATCAATCCCATCTGTATT+TGG | 0.262778 | 1_4:+59183195 | None:intergenic |
| TGGAACTGCTCGGACGTTAA+AGG | 0.278579 | 1_4:-59182358 | Msa0173840:CDS |
| ATACTCTACCTGTGATAAAA+AGG | 0.281635 | 1_4:-59182507 | Msa0173840:CDS |
| CGGCATAGAAGCCTCATTTA+TGG | 0.285632 | 1_4:-59183687 | Msa0173840:CDS |
| CTCACTTCCGATGGCGATTC+CGG | 0.289304 | 1_4:+59182732 | None:intergenic |
| AGAACAAAACCTGCAATATA+CGG | 0.290931 | 1_4:+59183382 | None:intergenic |
| TTGAGTTGCTCACAAGCTTC+CGG | 0.312746 | 1_4:+59182316 | None:intergenic |
| CGAACTTCCTTAATGTTTAT+CGG | 0.317616 | 1_4:+59184635 | None:intergenic |
| TAGATGGTCAGGGGAGTATT+TGG | 0.324308 | 1_4:-59183529 | Msa0173840:CDS |
| AAAAGTGGATGGGATGAATA+TGG | 0.325657 | 1_4:-59182820 | Msa0173840:CDS |
| TTAACTGATGTCATCATAAC+AGG | 0.329835 | 1_4:-59183657 | Msa0173840:intron |
| CTGCAAACCGATAAACATTA+AGG | 0.342230 | 1_4:-59184642 | Msa0173840:CDS |
| ATTGTAAAGTGTCAGTTTAG+TGG | 0.353949 | 1_4:-59182035 | Msa0173840:three_prime_UTR |
| TGAGTTGCTCACAAGCTTCC+GGG | 0.361594 | 1_4:+59182317 | None:intergenic |
| TCATCAGCCATCTCACTTTG+TGG | 0.368760 | 1_4:-59184448 | Msa0173840:CDS |
| GTTGCAGCTCATGGACAGTT+TGG | 0.372964 | 1_4:-59184676 | Msa0173840:CDS |
| CTATTCATCCCGTATATTGC+AGG | 0.373700 | 1_4:-59183391 | Msa0173840:intron |
| GATGAATATGGAATTTCATT+TGG | 0.376190 | 1_4:-59182808 | Msa0173840:CDS |
| GATATTGCTATTAGATTCAC+TGG | 0.376562 | 1_4:-59182568 | Msa0173840:CDS |
| CCAAGGTGATGTTAGAGATA+TGG | 0.381148 | 1_4:+59182599 | None:intergenic |
| ACGGGATGAATAGTCCAAAA+TGG | 0.385267 | 1_4:+59183401 | None:intergenic |
| ATTACTGTCGAGAATGTGAT+AGG | 0.387685 | 1_4:-59182484 | Msa0173840:CDS |
| CATTGATTTGTTGCAGCTCA+TGG | 0.393647 | 1_4:-59184685 | Msa0173840:CDS |
| CAATGGAACTATAGATGGTC+AGG | 0.395696 | 1_4:-59183540 | Msa0173840:CDS |
| CGTTAAAGGATACTCTGAAT+TGG | 0.398386 | 1_4:-59182344 | Msa0173840:CDS |
| GGCCTGATACAAGGTATTAA+AGG | 0.401311 | 1_4:-59182442 | Msa0173840:CDS |
| AGAGTTCGAGTAGTCGAAAC+AGG | 0.413361 | 1_4:-59182237 | Msa0173840:CDS |
| TCCGGCACTCGTTGTCCTCC+CGG | 0.414226 | 1_4:+59182750 | None:intergenic |
| GGCATAGAAGCCTCATTTAT+GGG | 0.414586 | 1_4:-59183686 | Msa0173840:CDS |
| CCTGCTGGCCAGTGGTTAAC+CGG | 0.420724 | 1_4:-59184482 | Msa0173840:CDS |
| CCGGTTAACCACTGGCCAGC+AGG | 0.424506 | 1_4:+59184482 | None:intergenic |
| GGGTTGCTTGGTTGCAGTCT+TGG | 0.430839 | 1_4:-59182216 | Msa0173840:CDS |
| TTTATCAATTCGACTAAATG+AGG | 0.438068 | 1_4:+59183467 | None:intergenic |
| AAGCTTGGCTCCACCTTTGT+CGG | 0.447146 | 1_4:+59184511 | None:intergenic |
| GTCAGTTTAGTGGTAAGTGC+AGG | 0.450053 | 1_4:-59182025 | Msa0173840:three_prime_UTR |
| GGCAACAATGGAACTATAGA+TGG | 0.450842 | 1_4:-59183545 | Msa0173840:CDS |
| TCTGGGTCATATGAGTCATC+TGG | 0.458182 | 1_4:+59182529 | None:intergenic |
| ATAAGAATAAAGACTTCTCC+CGG | 0.466538 | 1_4:-59182646 | Msa0173840:CDS |
| TTAAATTGTGCCCATAAATG+AGG | 0.481414 | 1_4:+59183676 | None:intergenic |
| GATCTAATTTCCATCAAAAG+TGG | 0.482686 | 1_4:-59182835 | Msa0173840:CDS |
| GACAAAGATGCAGTAATACT+TGG | 0.490886 | 1_4:-59184422 | Msa0173840:CDS |
| TGTTACAGAACTCTGAAGAT+TGG | 0.490896 | 1_4:-59183764 | Msa0173840:intron |
| TTACAAGTTAACAGATATCA+TGG | 0.491363 | 1_4:-59182260 | Msa0173840:CDS |
| CTCTGAAGATTGGCCAGTTG+TGG | 0.495481 | 1_4:-59183754 | Msa0173840:CDS |
| GTGGATCCTCTACCATCATA+TGG | 0.496479 | 1_4:-59183735 | Msa0173840:CDS |
| TTATCACAGGTAGAGTATCT+GGG | 0.500131 | 1_4:+59182512 | None:intergenic |
| TGCTTGGTTGCAGTCTTGGT+AGG | 0.501300 | 1_4:-59182212 | Msa0173840:exon |
| CAGCCATCTCACTTTGTGGT+TGG | 0.504099 | 1_4:-59184444 | Msa0173840:CDS |
| TCCTCTACCATCATATGGTA+GGG | 0.504397 | 1_4:-59183730 | Msa0173840:CDS |
| ACCGGGAGGACAACGAGTGC+CGG | 0.510929 | 1_4:-59182751 | Msa0173840:CDS |
| TTTAACATAACCACCCCTCC+CGG | 0.511069 | 1_4:+59182627 | None:intergenic |
| GATGGTAGAGGATCCACAAC+TGG | 0.512083 | 1_4:+59183741 | None:intergenic |
| TCTGTATTTGGTGAACCAAA+AGG | 0.519215 | 1_4:+59183207 | None:intergenic |
| GAATTTGGAGCAGTAGGAGA+TGG | 0.525396 | 1_4:-59184590 | Msa0173840:intron |
| TGGATGTTAATGTTTGTACT+TGG | 0.526630 | 1_4:+59182781 | None:intergenic |
| GCCATCGGAAGTGAGATGTC+TGG | 0.526771 | 1_4:-59182724 | Msa0173840:CDS |
| AATACAGATGGGATTGATCC+AGG | 0.527201 | 1_4:-59183192 | Msa0173840:intron |
| TTAACGTCCGAGCAGTTCCA+TGG | 0.530655 | 1_4:+59182361 | None:intergenic |
| GTAGTCGAAACAGGGTTGCT+TGG | 0.530724 | 1_4:-59182228 | Msa0173840:CDS |
| TAATTTCCATCAAAAGTGGA+TGG | 0.531088 | 1_4:-59182831 | Msa0173840:CDS |
| AAACGCGCGGGCCTGATACA+AGG | 0.531662 | 1_4:-59182451 | Msa0173840:CDS |
| TTTGGTTCACCAAATACAGA+TGG | 0.531824 | 1_4:-59183204 | Msa0173840:CDS |
| ATAAAGACTTCTCCCGGGAG+GGG | 0.536499 | 1_4:-59182640 | Msa0173840:CDS |
| ATTAACATCCACAGGCTCAC+CGG | 0.537205 | 1_4:-59182769 | Msa0173840:CDS |
| GAAGGGAGTTGCCAGGTGGA+CGG | 0.537707 | 1_4:-59183707 | Msa0173840:CDS |
| AATAAAGACTTCTCCCGGGA+GGG | 0.539545 | 1_4:-59182641 | Msa0173840:CDS |
| ATACTCTGAATTGGTTTCCC+CGG | 0.540672 | 1_4:-59182335 | Msa0173840:CDS |
| TACCATCATATGGTAGGGGA+AGG | 0.548235 | 1_4:-59183725 | Msa0173840:CDS |
| GAACAAAACCTGCAATATAC+GGG | 0.548268 | 1_4:+59183383 | None:intergenic |
| CGACCCAATGTAGGCAACAA+TGG | 0.548969 | 1_4:-59183557 | Msa0173840:intron |
| TTGTCCTCCCGGTGAGCCTG+TGG | 0.550617 | 1_4:+59182761 | None:intergenic |
| TCCCTTCCCCTACCATATGA+TGG | 0.550890 | 1_4:+59183723 | None:intergenic |
| GTACAAACATTAACATCCAC+AGG | 0.555385 | 1_4:-59182777 | Msa0173840:CDS |
| ATACGAATTTAGGTAGAAGA+TGG | 0.555815 | 1_4:+59184535 | None:intergenic |
| CCCCTACCATATGATGGTAG+AGG | 0.560136 | 1_4:+59183729 | None:intergenic |
| AGGCTTCTATGCCGTCCACC+TGG | 0.560231 | 1_4:+59183696 | None:intergenic |
| TGCAGTAATACTTGGATCAA+CGG | 0.561147 | 1_4:-59184414 | Msa0173840:intron |
| TTAACATAACCACCCCTCCC+GGG | 0.564851 | 1_4:+59182628 | None:intergenic |
| ATGGTCAGGGGAGTATTTGG+TGG | 0.566466 | 1_4:-59183526 | Msa0173840:CDS |
| TTACTGTCGAGAATGTGATA+GGG | 0.570895 | 1_4:-59182483 | Msa0173840:CDS |
| TTGGTTCACCAAATACAGAT+GGG | 0.571959 | 1_4:-59183203 | Msa0173840:CDS |
| CAAAACTACCGGTTAACCAC+TGG | 0.574055 | 1_4:+59184474 | None:intergenic |
| TTAACATCCACAGGCTCACC+GGG | 0.574227 | 1_4:-59182768 | Msa0173840:CDS |
| AATTCGTATGCCGACAAAGG+TGG | 0.577479 | 1_4:-59184521 | Msa0173840:CDS |
| CCAAAATGGTGAATTCAAGA+AGG | 0.579215 | 1_4:+59183415 | None:intergenic |
| AATTTGGAGCAGTAGGAGAT+GGG | 0.579376 | 1_4:-59184589 | Msa0173840:intron |
| TCAGTTTAGTGGTAAGTGCA+GGG | 0.580269 | 1_4:-59182024 | Msa0173840:three_prime_UTR |
| GATGGAAATTAGATCATCGC+CGG | 0.581092 | 1_4:+59182843 | None:intergenic |
| TGTTGTCAAAGTGATATCAA+TGG | 0.584592 | 1_4:-59182068 | Msa0173840:three_prime_UTR |
| AAGACTTCTCCCGGGAGGGG+TGG | 0.589573 | 1_4:-59182637 | Msa0173840:CDS |
| TTATCAATTCGACTAAATGA+GGG | 0.594556 | 1_4:+59183468 | None:intergenic |
| GAAGACTGTTATATGAGCAC+CGG | 0.595782 | 1_4:-59182862 | Msa0173840:CDS |
| ATCCTCTACCATCATATGGT+AGG | 0.598263 | 1_4:-59183731 | Msa0173840:CDS |
| CGGTTAACCACTGGCCAGCA+GGG | 0.600393 | 1_4:+59184483 | None:intergenic |
| TTGGTGAACCAAAAGGAGCA+AGG | 0.603870 | 1_4:+59183214 | None:intergenic |
| AATGGAACTATAGATGGTCA+GGG | 0.604106 | 1_4:-59183539 | Msa0173840:CDS |
| TACTGTCGAGAATGTGATAG+GGG | 0.606390 | 1_4:-59182482 | Msa0173840:CDS |
| CTAAATTCGTATGCCGACAA+AGG | 0.607464 | 1_4:-59184524 | Msa0173840:CDS |
| CCATATCTCTAACATCACCT+TGG | 0.608668 | 1_4:-59182599 | Msa0173840:CDS |
| AATTTCCATCAAAAGTGGAT+GGG | 0.610387 | 1_4:-59182830 | Msa0173840:CDS |
| GGTAGGGGAAGGGAGTTGCC+AGG | 0.612580 | 1_4:-59183714 | Msa0173840:CDS |
| GCTGATGAGATCAAAACTAC+CGG | 0.612616 | 1_4:+59184463 | None:intergenic |
| GAGTTGCTCACAAGCTTCCG+GGG | 0.613710 | 1_4:+59182318 | None:intergenic |
| ACGAGTGCCGGAATCGCCAT+CGG | 0.615761 | 1_4:-59182739 | Msa0173840:CDS |
| GGGGAAAACATCAAACGCGC+GGG | 0.616437 | 1_4:-59182463 | Msa0173840:CDS |
| CCTCTACCATCATATGGTAG+GGG | 0.616722 | 1_4:-59183729 | Msa0173840:CDS |
| TCCAGACATCTCACTTCCGA+TGG | 0.620855 | 1_4:+59182723 | None:intergenic |
| ACCATCATATGGTAGGGGAA+GGG | 0.626662 | 1_4:-59183724 | Msa0173840:CDS |
| AGCAATATCTACATTAACCA+AGG | 0.627118 | 1_4:+59182582 | None:intergenic |
| TGTCCAACCACAAAGTGAGA+TGG | 0.629482 | 1_4:+59184441 | None:intergenic |
| CGAATTGATAAATTCAACAG+AGG | 0.637343 | 1_4:-59183456 | Msa0173840:CDS |
| AGGGGAAGGGAGTTGCCAGG+TGG | 0.645313 | 1_4:-59183711 | Msa0173840:CDS |
| CAGTTTAGTGGTAAGTGCAG+GGG | 0.646160 | 1_4:-59182023 | Msa0173840:three_prime_UTR |
| TAAGAATAAAGACTTCTCCC+GGG | 0.654747 | 1_4:-59182645 | Msa0173840:CDS |
| AGGGGAAAACATCAAACGCG+CGG | 0.655278 | 1_4:-59182464 | Msa0173840:CDS |
| GAATAAAGACTTCTCCCGGG+AGG | 0.661627 | 1_4:-59182642 | Msa0173840:CDS |
| GTGCAGGGGACTAATAACCA+TGG | 0.661870 | 1_4:-59182009 | Msa0173840:three_prime_UTR |
| ATCGGAAGTGAGATGTCTGG+AGG | 0.664879 | 1_4:-59182721 | Msa0173840:CDS |
| TGGGATCACTCTCAATACAA+AGG | 0.671060 | 1_4:-59184570 | Msa0173840:CDS |
| GAGTTCGAGTAGTCGAAACA+GGG | 0.687667 | 1_4:-59182236 | Msa0173840:CDS |
| TGACATTCTGAATTGTAACA+TGG | 0.692990 | 1_4:+59183241 | None:intergenic |
| TCAGTAATACTGACACTGTG+TGG | 0.693416 | 1_4:+59184611 | None:intergenic |
| ATGGAACTATAGATGGTCAG+GGG | 0.713739 | 1_4:-59183538 | Msa0173840:CDS |
| ACATCCACAGGCTCACCGGG+AGG | 0.716687 | 1_4:-59182765 | Msa0173840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATATTTTTTGTGATTA+TGG | + | chr1_4:59182684-59182703 | None:intergenic | 10.0% |
| !! | GTTTAGTATTTGTATAAATA+AGG | - | chr1_4:59182632-59182651 | Msa0173840:CDS | 15.0% |
| !! | ACATTAATTAATGTATGCAT+AGG | + | chr1_4:59182380-59182399 | None:intergenic | 20.0% |
| !! | TATGTTTGTATTTCATTAAC+CGG | - | chr1_4:59182820-59182839 | Msa0173840:CDS | 20.0% |
| !! | ATATAAATATTGATGCCATT+TGG | - | chr1_4:59183098-59183117 | Msa0173840:intron | 20.0% |
| ! | AAATCACAGTTAATTCACAT+TGG | - | chr1_4:59182493-59182512 | Msa0173840:CDS | 25.0% |
| ! | AATCACAGTTAATTCACATT+GGG | - | chr1_4:59182494-59182513 | Msa0173840:CDS | 25.0% |
| ! | CTTCTAATCATAACTGAATA+AGG | + | chr1_4:59182613-59182632 | None:intergenic | 25.0% |
| ! | TTTAGAAAACTAGATAAGGA+AGG | + | chr1_4:59182720-59182739 | None:intergenic | 25.0% |
| !!! | AGGTTTTAGAAAACTAGATA+AGG | + | chr1_4:59182724-59182743 | None:intergenic | 25.0% |
| ! | TACAAAATAATCCTTGCATA+GGG | + | chr1_4:59182757-59182776 | None:intergenic | 25.0% |
| ! | CATAACTTATATAGTAGTGA+TGG | + | chr1_4:59182804-59182823 | None:intergenic | 25.0% |
| ! | AATTAAACTACCAAGTTTGT+TGG | + | chr1_4:59182853-59182872 | None:intergenic | 25.0% |
| ! | TTATCAATTCGACTAAATGA+GGG | + | chr1_4:59183213-59183232 | None:intergenic | 25.0% |
| ! | TTTATCAATTCGACTAAATG+AGG | + | chr1_4:59183214-59183233 | None:intergenic | 25.0% |
| ! | ACTATTTCACAGTCTTAAAA+TGG | + | chr1_4:59183369-59183388 | None:intergenic | 25.0% |
| ! | ATATTGAATTCCTGTTCATT+TGG | - | chr1_4:59183583-59183602 | Msa0173840:intron | 25.0% |
| !!! | GAGATATATTGATTTCAACA+AGG | + | chr1_4:59183670-59183689 | None:intergenic | 25.0% |
| ! | GATGAATATGGAATTTCATT+TGG | - | chr1_4:59183870-59183889 | Msa0173840:intron | 25.0% |
| !!! | ATTAGATTCACTGGTTTATA+TGG | - | chr1_4:59184119-59184138 | Msa0173840:intron | 25.0% |
| ! | TAACAGTTTGAAAAATGATC+AGG | + | chr1_4:59184401-59184420 | None:intergenic | 25.0% |
| ! | TTACAAGTTAACAGATATCA+TGG | - | chr1_4:59184418-59184437 | Msa0173840:CDS | 25.0% |
| !! | TTCAAGTATCTTTGAACTTT+TGG | + | chr1_4:59184520-59184539 | None:intergenic | 25.0% |
| ! | ACTGACTATTGTTATGATTA+AGG | - | chr1_4:59184705-59184724 | Msa0173840:CDS | 25.0% |
| CGAACTTCCTTAATGTTTAT+CGG | + | chr1_4:59182046-59182065 | None:intergenic | 30.0% | |
| AGTGTCAGTATTACTGAATT+TGG | - | chr1_4:59182073-59182092 | Msa0173840:three_prime_UTR | 30.0% | |
| ATACGAATTTAGGTAGAAGA+TGG | + | chr1_4:59182146-59182165 | None:intergenic | 30.0% | |
| TTGCATAGGGTTAAAGTTAT+AGG | + | chr1_4:59182744-59182763 | None:intergenic | 30.0% | |
| TATAACTTTAACCCTATGCA+AGG | - | chr1_4:59182743-59182762 | Msa0173840:CDS | 30.0% | |
| GTACAAAATAATCCTTGCAT+AGG | + | chr1_4:59182758-59182777 | None:intergenic | 30.0% | |
| CATTACACACTATATCGTAA+TGG | + | chr1_4:59182896-59182915 | None:intergenic | 30.0% | |
| TTAAATTGTGCCCATAAATG+AGG | + | chr1_4:59183005-59183024 | None:intergenic | 30.0% | |
| TTAACTGATGTCATCATAAC+AGG | - | chr1_4:59183021-59183040 | Msa0173840:intron | 30.0% | |
| CGAATTGATAAATTCAACAG+AGG | - | chr1_4:59183222-59183241 | Msa0173840:CDS | 30.0% | |
| AGAACAAAACCTGCAATATA+CGG | + | chr1_4:59183299-59183318 | None:intergenic | 30.0% | |
| GTGAAATAGTAAAGCTTTCA+TGG | - | chr1_4:59183379-59183398 | Msa0173840:intron | 30.0% | |
| TAGTAAAGCTTTCATGGTTA+TGG | - | chr1_4:59183385-59183404 | Msa0173840:intron | 30.0% | |
| AGTAAAGCTTTCATGGTTAT+GGG | - | chr1_4:59183386-59183405 | Msa0173840:intron | 30.0% | |
| TGACATTCTGAATTGTAACA+TGG | + | chr1_4:59183440-59183459 | None:intergenic | 30.0% | |
| ATTAACAACTACATAGGGTA+TGG | + | chr1_4:59183538-59183557 | None:intergenic | 30.0% | |
| TGTGCATTAACAACTACATA+GGG | + | chr1_4:59183543-59183562 | None:intergenic | 30.0% | |
| TTGTGCATTAACAACTACAT+AGG | + | chr1_4:59183544-59183563 | None:intergenic | 30.0% | |
| ! | TACTTCCTTTATGCCTTTTT+GGG | + | chr1_4:59183610-59183629 | None:intergenic | 30.0% |
| ! | ATACTTCCTTTATGCCTTTT+TGG | + | chr1_4:59183611-59183630 | None:intergenic | 30.0% |
| !!! | CGAGTCTTTTGAAACAAAAT+TGG | + | chr1_4:59183737-59183756 | None:intergenic | 30.0% |
| !! | TTTTGTTTCAAAAGACTCGT+CGG | - | chr1_4:59183738-59183757 | Msa0173840:CDS | 30.0% |
| AGAATCTGGACACAAATAAA+AGG | + | chr1_4:59183778-59183797 | None:intergenic | 30.0% | |
| CATACATTATCAGAAGAATC+TGG | + | chr1_4:59183792-59183811 | None:intergenic | 30.0% | |
| GATCTAATTTCCATCAAAAG+TGG | - | chr1_4:59183843-59183862 | Msa0173840:intron | 30.0% | |
| TAATTTCCATCAAAAGTGGA+TGG | - | chr1_4:59183847-59183866 | Msa0173840:intron | 30.0% | |
| AATTTCCATCAAAAGTGGAT+GGG | - | chr1_4:59183848-59183867 | Msa0173840:intron | 30.0% | |
| TGGATGTTAATGTTTGTACT+TGG | + | chr1_4:59183900-59183919 | None:intergenic | 30.0% | |
| !! | TTGCACTTTTTGAATCAAAC+AGG | + | chr1_4:59184013-59184032 | None:intergenic | 30.0% |
| ATAAGAATAAAGACTTCTCC+CGG | - | chr1_4:59184032-59184051 | Msa0173840:intron | 30.0% | |
| AGCAATATCTACATTAACCA+AGG | + | chr1_4:59184099-59184118 | None:intergenic | 30.0% | |
| ! | GATATTGCTATTAGATTCAC+TGG | - | chr1_4:59184110-59184129 | Msa0173840:intron | 30.0% |
| ATACTCTACCTGTGATAAAA+AGG | - | chr1_4:59184171-59184190 | Msa0173840:intron | 30.0% | |
| ! | ACAGTAATCCTTTTTATCAC+AGG | + | chr1_4:59184182-59184201 | None:intergenic | 30.0% |
| ATGTGAGCAAAAAAAATCCA+TGG | - | chr1_4:59184300-59184319 | Msa0173840:intron | 30.0% | |
| TGTTGTCAAAGTGATATCAA+TGG | - | chr1_4:59184610-59184629 | Msa0173840:intron | 30.0% | |
| ! | ATTGTAAAGTGTCAGTTTAG+TGG | - | chr1_4:59184643-59184662 | Msa0173840:CDS | 30.0% |
| !! | CAGTGATAGTTTATTTTCCA+TGG | + | chr1_4:59184689-59184708 | None:intergenic | 30.0% |
| CTGCAAACCGATAAACATTA+AGG | - | chr1_4:59182036-59182055 | Msa0173840:three_prime_UTR | 35.0% | |
| ! | ATTACTGAATTTGGAGCAGT+AGG | - | chr1_4:59182082-59182101 | Msa0173840:three_prime_UTR | 35.0% |
| GACAAAGATGCAGTAATACT+TGG | - | chr1_4:59182256-59182275 | Msa0173840:CDS | 35.0% | |
| TGCAGTAATACTTGGATCAA+CGG | - | chr1_4:59182264-59182283 | Msa0173840:CDS | 35.0% | |
| ACTGCATTGAACACAAACAA+AGG | + | chr1_4:59182307-59182326 | None:intergenic | 35.0% | |
| ! | TTGTGTTCAATGCAGTTTTG+TGG | - | chr1_4:59182311-59182330 | Msa0173840:CDS | 35.0% |
| ! | ATGCATAGGAAGCATATCAT+AGG | + | chr1_4:59182366-59182385 | None:intergenic | 35.0% |
| ! | TGGCATTTGACTGTTTTCTA+GGG | - | chr1_4:59182554-59182573 | Msa0173840:CDS | 35.0% |
| !!! | ATTTGACTGTTTTCTAGGGT+TGG | - | chr1_4:59182558-59182577 | Msa0173840:CDS | 35.0% |
| GTAATAAATCATGACAGCCA+AGG | + | chr1_4:59182591-59182610 | None:intergenic | 35.0% | |
| ! | ATATCGTAATGGAGAACACA+TGG | + | chr1_4:59182885-59182904 | None:intergenic | 35.0% |
| ! | TGTTACAGAACTCTGAAGAT+TGG | - | chr1_4:59182914-59182933 | Msa0173840:intron | 35.0% |
| AATGGAACTATAGATGGTCA+GGG | - | chr1_4:59183139-59183158 | Msa0173840:intron | 35.0% | |
| CCAAAATGGTGAATTCAAGA+AGG | + | chr1_4:59183266-59183285 | None:intergenic | 35.0% | |
| ! | CCTTCTTGAATTCACCATTT+TGG | - | chr1_4:59183263-59183282 | Msa0173840:intron | 35.0% |
| GAACAAAACCTGCAATATAC+GGG | + | chr1_4:59183298-59183317 | None:intergenic | 35.0% | |
| ! | TCTGTATTTGGTGAACCAAA+AGG | + | chr1_4:59183474-59183493 | None:intergenic | 35.0% |
| ! | TTTGGTTCACCAAATACAGA+TGG | - | chr1_4:59183474-59183493 | Msa0173840:CDS | 35.0% |
| TTGGTTCACCAAATACAGAT+GGG | - | chr1_4:59183475-59183494 | Msa0173840:CDS | 35.0% | |
| AAAAGTGGATGGGATGAATA+TGG | - | chr1_4:59183858-59183877 | Msa0173840:intron | 35.0% | |
| GTACAAACATTAACATCCAC+AGG | - | chr1_4:59183901-59183920 | Msa0173840:intron | 35.0% | |
| TAAGAATAAAGACTTCTCCC+GGG | - | chr1_4:59184033-59184052 | Msa0173840:intron | 35.0% | |
| ! | TTATCACAGGTAGAGTATCT+GGG | + | chr1_4:59184169-59184188 | None:intergenic | 35.0% |
| ! | TTTATCACAGGTAGAGTATC+TGG | + | chr1_4:59184170-59184189 | None:intergenic | 35.0% |
| ATTACTGTCGAGAATGTGAT+AGG | - | chr1_4:59184194-59184213 | Msa0173840:intron | 35.0% | |
| TTACTGTCGAGAATGTGATA+GGG | - | chr1_4:59184195-59184214 | Msa0173840:intron | 35.0% | |
| CACCTTTAATACCTTGTATC+AGG | + | chr1_4:59184241-59184260 | None:intergenic | 35.0% | |
| AAAAAATCCATGGAACTGCT+CGG | - | chr1_4:59184310-59184329 | Msa0173840:intron | 35.0% | |
| CGTTAAAGGATACTCTGAAT+TGG | - | chr1_4:59184334-59184353 | Msa0173840:intron | 35.0% | |
| ACGTGACCTAAAAAGTTGAA+TGG | - | chr1_4:59184573-59184592 | Msa0173840:CDS | 35.0% | |
| ! | GCAACACCATTCAACTTTTT+AGG | + | chr1_4:59184582-59184601 | None:intergenic | 35.0% |
| !! | CATTGATTTGTTGCAGCTCA+TGG | - | chr1_4:59181993-59182012 | Msa0173840:three_prime_UTR | 40.0% |
| TCAGTAATACTGACACTGTG+TGG | + | chr1_4:59182070-59182089 | None:intergenic | 40.0% | |
| ! | AATTTGGAGCAGTAGGAGAT+GGG | - | chr1_4:59182089-59182108 | Msa0173840:three_prime_UTR | 40.0% |
| TGGGATCACTCTCAATACAA+AGG | - | chr1_4:59182108-59182127 | Msa0173840:three_prime_UTR | 40.0% | |
| CTTTGTCGGCATACGAATTT+AGG | + | chr1_4:59182156-59182175 | None:intergenic | 40.0% | |
| CTAAATTCGTATGCCGACAA+AGG | - | chr1_4:59182154-59182173 | Msa0173840:three_prime_UTR | 40.0% | |
| GCTGATGAGATCAAAACTAC+CGG | + | chr1_4:59182218-59182237 | None:intergenic | 40.0% | |
| !! | GTTCAATGCAGTTTTGTGGA+AGG | - | chr1_4:59182315-59182334 | Msa0173840:CDS | 40.0% |
| GCATATCATAGGAACAGTAC+AGG | + | chr1_4:59182355-59182374 | None:intergenic | 40.0% | |
| GTTAATTCACATTGGGAAGC+TGG | - | chr1_4:59182501-59182520 | Msa0173840:CDS | 40.0% | |
| !! | AAATGCCACGTTTGGTTTGA+CGG | + | chr1_4:59182542-59182561 | None:intergenic | 40.0% |
| AAACAGTCAAATGCCACGTT+TGG | + | chr1_4:59182550-59182569 | None:intergenic | 40.0% | |
| ! | GTGGCATTTGACTGTTTTCT+AGG | - | chr1_4:59182553-59182572 | Msa0173840:CDS | 40.0% |
| !! | CTAGGGTTGGTATATTACCT+TGG | - | chr1_4:59182571-59182590 | Msa0173840:CDS | 40.0% |
| ATAAGGAAGGAGACAAGAGA+GGG | + | chr1_4:59182707-59182726 | None:intergenic | 40.0% | |
| TAGTAGTGATGGCATACGAA+GGG | + | chr1_4:59182793-59182812 | None:intergenic | 40.0% | |
| ATAGTAGTGATGGCATACGA+AGG | + | chr1_4:59182794-59182813 | None:intergenic | 40.0% | |
| ATCCTCTACCATCATATGGT+AGG | - | chr1_4:59182947-59182966 | Msa0173840:intron | 40.0% | |
| TCCTCTACCATCATATGGTA+GGG | - | chr1_4:59182948-59182967 | Msa0173840:intron | 40.0% | |
| GGCATAGAAGCCTCATTTAT+GGG | - | chr1_4:59182992-59183011 | Msa0173840:intron | 40.0% | |
| GTTCCATTGTTGCCTACATT+GGG | + | chr1_4:59183127-59183146 | None:intergenic | 40.0% | |
| AGTTCCATTGTTGCCTACAT+TGG | + | chr1_4:59183128-59183147 | None:intergenic | 40.0% | |
| GGCAACAATGGAACTATAGA+TGG | - | chr1_4:59183133-59183152 | Msa0173840:intron | 40.0% | |
| CAATGGAACTATAGATGGTC+AGG | - | chr1_4:59183138-59183157 | Msa0173840:intron | 40.0% | |
| ATGGAACTATAGATGGTCAG+GGG | - | chr1_4:59183140-59183159 | Msa0173840:intron | 40.0% | |
| ACGGGATGAATAGTCCAAAA+TGG | + | chr1_4:59183280-59183299 | None:intergenic | 40.0% | |
| CTATTCATCCCGTATATTGC+AGG | - | chr1_4:59183287-59183306 | Msa0173840:intron | 40.0% | |
| !!! | CAGGTTTTGTTCTCTTCAGA+AGG | - | chr1_4:59183306-59183325 | Msa0173840:intron | 40.0% |
| GGATCAATCCCATCTGTATT+TGG | + | chr1_4:59183486-59183505 | None:intergenic | 40.0% | |
| AATACAGATGGGATTGATCC+AGG | - | chr1_4:59183486-59183505 | Msa0173840:CDS | 40.0% | |
| CCTAAGGAAGAAAATTCACC+TGG | + | chr1_4:59183507-59183526 | None:intergenic | 40.0% | |
| ! | CCAGGTGAATTTTCTTCCTT+AGG | - | chr1_4:59183504-59183523 | Msa0173840:CDS | 40.0% |
| ! | GTGAATTTTCTTCCTTAGGC+TGG | - | chr1_4:59183508-59183527 | Msa0173840:CDS | 40.0% |
| !!! | CTTTTTGGGTCCAAATGAAC+AGG | + | chr1_4:59183596-59183615 | None:intergenic | 40.0% |
| CTGTTCATTTGGACCCAAAA+AGG | - | chr1_4:59183594-59183613 | Msa0173840:intron | 40.0% | |
| ! | TTGGACCCAAAAAGGCATAA+AGG | - | chr1_4:59183602-59183621 | Msa0173840:intron | 40.0% |
| TGTCATCTGTCAACTATGCT+AGG | + | chr1_4:59183692-59183711 | None:intergenic | 40.0% | |
| GAAGACTGTTATATGAGCAC+CGG | - | chr1_4:59183816-59183835 | Msa0173840:intron | 40.0% | |
| GATGGAAATTAGATCATCGC+CGG | + | chr1_4:59183838-59183857 | None:intergenic | 40.0% | |
| !! | TTCATCCCATCCACTTTTGA+TGG | + | chr1_4:59183856-59183875 | None:intergenic | 40.0% |
| CCAAGGTGATGTTAGAGATA+TGG | + | chr1_4:59184082-59184101 | None:intergenic | 40.0% | |
| CCATATCTCTAACATCACCT+TGG | - | chr1_4:59184079-59184098 | Msa0173840:intron | 40.0% | |
| TACTGTCGAGAATGTGATAG+GGG | - | chr1_4:59184196-59184215 | Msa0173840:intron | 40.0% | |
| ! | GGCCTGATACAAGGTATTAA+AGG | - | chr1_4:59184236-59184255 | Msa0173840:intron | 40.0% |
| ! | ATACTCTGAATTGGTTTCCC+CGG | - | chr1_4:59184343-59184362 | Msa0173840:intron | 40.0% |
| TCAGTTTAGTGGTAAGTGCA+GGG | - | chr1_4:59184654-59184673 | Msa0173840:CDS | 40.0% | |
| ! | GAATTTGGAGCAGTAGGAGA+TGG | - | chr1_4:59182088-59182107 | Msa0173840:three_prime_UTR | 45.0% |
| AATTCGTATGCCGACAAAGG+TGG | - | chr1_4:59182157-59182176 | Msa0173840:three_prime_UTR | 45.0% | |
| ! | CAAAACTACCGGTTAACCAC+TGG | + | chr1_4:59182207-59182226 | None:intergenic | 45.0% |
| TCATCAGCCATCTCACTTTG+TGG | - | chr1_4:59182230-59182249 | Msa0173840:CDS | 45.0% | |
| TGTCCAACCACAAAGTGAGA+TGG | + | chr1_4:59182240-59182259 | None:intergenic | 45.0% | |
| CGAAGCGTGAAAACAAACAC+TGG | + | chr1_4:59182470-59182489 | None:intergenic | 45.0% | |
| GATAAGGAAGGAGACAAGAG+AGG | + | chr1_4:59182708-59182727 | None:intergenic | 45.0% | |
| !! | CAAGTTTGTTGGACTCAAGC+CGG | + | chr1_4:59182842-59182861 | None:intergenic | 45.0% |
| GTGGATCCTCTACCATCATA+TGG | - | chr1_4:59182943-59182962 | Msa0173840:intron | 45.0% | |
| CCTCTACCATCATATGGTAG+GGG | - | chr1_4:59182949-59182968 | Msa0173840:intron | 45.0% | |
| TACCATCATATGGTAGGGGA+AGG | - | chr1_4:59182953-59182972 | Msa0173840:intron | 45.0% | |
| ACCATCATATGGTAGGGGAA+GGG | - | chr1_4:59182954-59182973 | Msa0173840:intron | 45.0% | |
| CGGCATAGAAGCCTCATTTA+TGG | - | chr1_4:59182991-59183010 | Msa0173840:intron | 45.0% | |
| !! | TAGATGGTCAGGGGAGTATT+TGG | - | chr1_4:59183149-59183168 | Msa0173840:intron | 45.0% |
| ! | GTCACAATCCTTGCTCCTTT+TGG | - | chr1_4:59183456-59183475 | Msa0173840:CDS | 45.0% |
| TTGGTGAACCAAAAGGAGCA+AGG | + | chr1_4:59183467-59183486 | None:intergenic | 45.0% | |
| ATTAACATCCACAGGCTCAC+CGG | - | chr1_4:59183909-59183928 | Msa0173840:intron | 45.0% | |
| AATAAAGACTTCTCCCGGGA+GGG | - | chr1_4:59184037-59184056 | Msa0173840:intron | 45.0% | |
| TTTAACATAACCACCCCTCC+CGG | + | chr1_4:59184054-59184073 | None:intergenic | 45.0% | |
| TCTGGGTCATATGAGTCATC+TGG | + | chr1_4:59184152-59184171 | None:intergenic | 45.0% | |
| ! | TTGAGTTGCTCACAAGCTTC+CGG | + | chr1_4:59184365-59184384 | None:intergenic | 45.0% |
| AGAGTTCGAGTAGTCGAAAC+AGG | - | chr1_4:59184441-59184460 | Msa0173840:CDS | 45.0% | |
| GAGTTCGAGTAGTCGAAACA+GGG | - | chr1_4:59184442-59184461 | Msa0173840:CDS | 45.0% | |
| GTCAGTTTAGTGGTAAGTGC+AGG | - | chr1_4:59184653-59184672 | Msa0173840:CDS | 45.0% | |
| CAGTTTAGTGGTAAGTGCAG+GGG | - | chr1_4:59184655-59184674 | Msa0173840:CDS | 45.0% | |
| GTTGCAGCTCATGGACAGTT+TGG | - | chr1_4:59182002-59182021 | Msa0173840:three_prime_UTR | 50.0% | |
| AAGCTTGGCTCCACCTTTGT+CGG | + | chr1_4:59182170-59182189 | None:intergenic | 50.0% | |
| CAGCCATCTCACTTTGTGGT+TGG | - | chr1_4:59182234-59182253 | Msa0173840:CDS | 50.0% | |
| CGGCTTGAGTCCAACAAACT+TGG | - | chr1_4:59182840-59182859 | Msa0173840:CDS | 50.0% | |
| ! | CTCTGAAGATTGGCCAGTTG+TGG | - | chr1_4:59182924-59182943 | Msa0173840:intron | 50.0% |
| GATGGTAGAGGATCCACAAC+TGG | + | chr1_4:59182940-59182959 | None:intergenic | 50.0% | |
| CCCCTACCATATGATGGTAG+AGG | + | chr1_4:59182952-59182971 | None:intergenic | 50.0% | |
| TCCCTTCCCCTACCATATGA+TGG | + | chr1_4:59182958-59182977 | None:intergenic | 50.0% | |
| CGACCCAATGTAGGCAACAA+TGG | - | chr1_4:59183121-59183140 | Msa0173840:intron | 50.0% | |
| !! | ATGGTCAGGGGAGTATTTGG+TGG | - | chr1_4:59183152-59183171 | Msa0173840:intron | 50.0% |
| TTAACATCCACAGGCTCACC+GGG | - | chr1_4:59183910-59183929 | Msa0173840:intron | 50.0% | |
| TCCAGACATCTCACTTCCGA+TGG | + | chr1_4:59183958-59183977 | None:intergenic | 50.0% | |
| ATCGGAAGTGAGATGTCTGG+AGG | - | chr1_4:59183957-59183976 | Msa0173840:intron | 50.0% | |
| GAATAAAGACTTCTCCCGGG+AGG | - | chr1_4:59184036-59184055 | Msa0173840:intron | 50.0% | |
| ATAAAGACTTCTCCCGGGAG+GGG | - | chr1_4:59184038-59184057 | Msa0173840:intron | 50.0% | |
| TTAACATAACCACCCCTCCC+GGG | + | chr1_4:59184053-59184072 | None:intergenic | 50.0% | |
| AGGGGAAAACATCAAACGCG+CGG | - | chr1_4:59184214-59184233 | Msa0173840:intron | 50.0% | |
| TTAACGTCCGAGCAGTTCCA+TGG | + | chr1_4:59184320-59184339 | None:intergenic | 50.0% | |
| TGGAACTGCTCGGACGTTAA+AGG | - | chr1_4:59184320-59184339 | Msa0173840:intron | 50.0% | |
| TGAGTTGCTCACAAGCTTCC+GGG | + | chr1_4:59184364-59184383 | None:intergenic | 50.0% | |
| GTAGTCGAAACAGGGTTGCT+TGG | - | chr1_4:59184450-59184469 | Msa0173840:CDS | 50.0% | |
| TGCTTGGTTGCAGTCTTGGT+AGG | - | chr1_4:59184466-59184485 | Msa0173840:CDS | 50.0% | |
| GTGCAGGGGACTAATAACCA+TGG | - | chr1_4:59184669-59184688 | Msa0173840:CDS | 50.0% | |
| ! | GCCAAGCTTTTTGTCCCTGC+TGG | - | chr1_4:59182181-59182200 | Msa0173840:three_prime_UTR | 55.0% |
| GCCAGCAGGGACAAAAAGCT+TGG | + | chr1_4:59182185-59182204 | None:intergenic | 55.0% | |
| ! | TTTTTGTCCCTGCTGGCCAG+TGG | - | chr1_4:59182188-59182207 | Msa0173840:three_prime_UTR | 55.0% |
| !! | TGCCACGTTTGGTTTGACGG+CGG | + | chr1_4:59182539-59182558 | None:intergenic | 55.0% |
| GCCATTTGGCGACCCAATGT+AGG | - | chr1_4:59183112-59183131 | Msa0173840:intron | 55.0% | |
| GCCTACATTGGGTCGCCAAA+TGG | + | chr1_4:59183116-59183135 | None:intergenic | 55.0% | |
| GGGTATGGCATTCCAGCCTA+AGG | + | chr1_4:59183523-59183542 | None:intergenic | 55.0% | |
| CTCACTTCCGATGGCGATTC+CGG | + | chr1_4:59183949-59183968 | None:intergenic | 55.0% | |
| GCCATCGGAAGTGAGATGTC+TGG | - | chr1_4:59183954-59183973 | Msa0173840:intron | 55.0% | |
| GGGGAAAACATCAAACGCGC+GGG | - | chr1_4:59184215-59184234 | Msa0173840:intron | 55.0% | |
| GAGTTGCTCACAAGCTTCCG+GGG | + | chr1_4:59184363-59184382 | None:intergenic | 55.0% | |
| GGGTTGCTTGGTTGCAGTCT+TGG | - | chr1_4:59184462-59184481 | Msa0173840:CDS | 55.0% | |
| CGGTTAACCACTGGCCAGCA+GGG | + | chr1_4:59182198-59182217 | None:intergenic | 60.0% | |
| CCTGCTGGCCAGTGGTTAAC+CGG | - | chr1_4:59182196-59182215 | Msa0173840:exon | 60.0% | |
| !! | CACGTTTGGTTTGACGGCGG+GGG | + | chr1_4:59182536-59182555 | None:intergenic | 60.0% |
| !! | CCACGTTTGGTTTGACGGCG+GGG | + | chr1_4:59182537-59182556 | None:intergenic | 60.0% |
| !! | GCCACGTTTGGTTTGACGGC+GGG | + | chr1_4:59182538-59182557 | None:intergenic | 60.0% |
| GAAGGGAGTTGCCAGGTGGA+CGG | - | chr1_4:59182971-59182990 | Msa0173840:intron | 60.0% | |
| AGGCTTCTATGCCGTCCACC+TGG | + | chr1_4:59182985-59183004 | None:intergenic | 60.0% | |
| !! | ACGAGTGCCGGAATCGCCAT+CGG | - | chr1_4:59183939-59183958 | Msa0173840:intron | 60.0% |
| AAACGCGCGGGCCTGATACA+AGG | - | chr1_4:59184227-59184246 | Msa0173840:intron | 60.0% | |
| CCGGTTAACCACTGGCCAGC+AGG | + | chr1_4:59182199-59182218 | None:intergenic | 65.0% | |
| CCCCGCCGTCAAACCAAACG+TGG | - | chr1_4:59182534-59182553 | Msa0173840:CDS | 65.0% | |
| GGTAGGGGAAGGGAGTTGCC+AGG | - | chr1_4:59182964-59182983 | Msa0173840:intron | 65.0% | |
| AGGGGAAGGGAGTTGCCAGG+TGG | - | chr1_4:59182967-59182986 | Msa0173840:intron | 65.0% | |
| ACATCCACAGGCTCACCGGG+AGG | - | chr1_4:59183913-59183932 | Msa0173840:intron | 65.0% | |
| TTGTCCTCCCGGTGAGCCTG+TGG | + | chr1_4:59183920-59183939 | None:intergenic | 65.0% | |
| ACCGGGAGGACAACGAGTGC+CGG | - | chr1_4:59183927-59183946 | Msa0173840:intron | 65.0% | |
| TCCGGCACTCGTTGTCCTCC+CGG | + | chr1_4:59183931-59183950 | None:intergenic | 65.0% | |
| AAGACTTCTCCCGGGAGGGG+TGG | - | chr1_4:59184041-59184060 | Msa0173840:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 59181968 | 59184732 | 59181968 | ID=Msa0173840;Name=Msa0173840 |
| chr1_4 | mRNA | 59181968 | 59184732 | 59181968 | ID=Msa0173840-mRNA-1;Parent=Msa0173840;Name=Msa0173840-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.8|0.66|1|0.8|0.66|6|245|452 |
| chr1_4 | exon | 59181968 | 59182907 | 59181968 | ID=Msa0173840-mRNA-1:exon:18537;Parent=Msa0173840-mRNA-1 |
| chr1_4 | exon | 59183193 | 59183263 | 59183193 | ID=Msa0173840-mRNA-1:exon:18536;Parent=Msa0173840-mRNA-1 |
| chr1_4 | exon | 59183392 | 59183566 | 59183392 | ID=Msa0173840-mRNA-1:exon:18535;Parent=Msa0173840-mRNA-1 |
| chr1_4 | exon | 59183658 | 59183778 | 59183658 | ID=Msa0173840-mRNA-1:exon:18534;Parent=Msa0173840-mRNA-1 |
| chr1_4 | exon | 59184415 | 59184599 | 59184415 | ID=Msa0173840-mRNA-1:exon:18533;Parent=Msa0173840-mRNA-1 |
| chr1_4 | exon | 59184621 | 59184732 | 59184621 | ID=Msa0173840-mRNA-1:exon:18532;Parent=Msa0173840-mRNA-1 |
| chr1_4 | CDS | 59184621 | 59184732 | 59184621 | ID=Msa0173840-mRNA-1:cds;Parent=Msa0173840-mRNA-1 |
| chr1_4 | CDS | 59184415 | 59184599 | 59184415 | ID=Msa0173840-mRNA-1:cds;Parent=Msa0173840-mRNA-1 |
| chr1_4 | CDS | 59183658 | 59183778 | 59183658 | ID=Msa0173840-mRNA-1:cds;Parent=Msa0173840-mRNA-1 |
| chr1_4 | CDS | 59183392 | 59183566 | 59183392 | ID=Msa0173840-mRNA-1:cds;Parent=Msa0173840-mRNA-1 |
| chr1_4 | CDS | 59183193 | 59183263 | 59183193 | ID=Msa0173840-mRNA-1:cds;Parent=Msa0173840-mRNA-1 |
| chr1_4 | CDS | 59182213 | 59182907 | 59182213 | ID=Msa0173840-mRNA-1:cds;Parent=Msa0173840-mRNA-1 |
| chr1_4 | three_prime_UTR | 59181968 | 59182212 | 59181968 | ID=Msa0173840-mRNA-1:three_prime_utr;Parent=Msa0173840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
