Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145390 | XP_013468382.1 | 96.787 | 249 | 8 | 0 | 1 | 249 | 1 | 249 | 1.93e-177 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145390 | sp|Q93XY5|TET18_ARATH | 52.612 | 268 | 92 | 5 | 1 | 240 | 1 | 261 | 2.65e-79 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145390 | A0A072VK97 | 96.787 | 249 | 8 | 0 | 1 | 249 | 1 | 249 | 9.21e-178 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026960 | Msa1145390 | 0.880175 | 6.813267e-70 | -8.615850e-47 |
| Msa0167270 | Msa1145390 | 0.879722 | 9.881026e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145390 | MtrunA17_Chr1g0182821 | 96.787 | 249 | 8 | 0 | 1 | 249 | 1 | 249 | 0.0 | 498 |
| Msa1145390 | MtrunA17_Chr5g0400291 | 36.502 | 263 | 143 | 7 | 3 | 243 | 1 | 261 | 1.79e-47 | 159 |
| Msa1145390 | MtrunA17_Chr4g0054961 | 36.735 | 245 | 139 | 5 | 13 | 243 | 10 | 252 | 4.17e-47 | 157 |
| Msa1145390 | MtrunA17_Chr4g0010471 | 29.167 | 216 | 135 | 7 | 12 | 222 | 9 | 211 | 4.11e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145390 | AT2G20230.1 | 52.612 | 268 | 92 | 5 | 1 | 240 | 1 | 261 | 2.70e-80 | 242 |
| Msa1145390 | AT4G28770.1 | 47.387 | 287 | 107 | 4 | 1 | 249 | 1 | 281 | 1.99e-71 | 220 |
| Msa1145390 | AT4G28770.2 | 47.387 | 287 | 107 | 4 | 1 | 249 | 45 | 325 | 4.15e-71 | 221 |
| Msa1145390 | AT2G20740.1 | 36.170 | 188 | 104 | 1 | 10 | 197 | 9 | 180 | 7.12e-44 | 148 |
| Msa1145390 | AT2G20740.2 | 41.353 | 133 | 78 | 0 | 65 | 197 | 7 | 139 | 1.71e-37 | 130 |
| Msa1145390 | AT1G32400.2 | 33.051 | 236 | 142 | 5 | 22 | 243 | 19 | 252 | 3.24e-32 | 119 |
| Msa1145390 | AT1G32400.1 | 33.051 | 236 | 142 | 5 | 22 | 243 | 19 | 252 | 3.24e-32 | 119 |
| Msa1145390 | AT1G32400.3 | 33.051 | 236 | 142 | 5 | 22 | 243 | 19 | 252 | 3.24e-32 | 119 |
| Msa1145390 | AT2G20740.3 | 37.500 | 88 | 55 | 0 | 110 | 197 | 3 | 90 | 1.07e-18 | 80.1 |
Find 83 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGTTCTGCACAGATTT+TGG | 0.115319 | 7_4:-22189953 | Msa1145390:three_prime_UTR |
| TTCTTTCCAAATCAAAATTC+AGG | 0.257790 | 7_4:-22194182 | Msa1145390:five_prime_UTR |
| AATTTAACTTGGTAGAATTA+AGG | 0.269640 | 7_4:-22189895 | Msa1145390:three_prime_UTR |
| GTGTGCTGCATTGCTTTCTT+TGG | 0.269796 | 7_4:-22193211 | Msa1145390:CDS |
| ATTGCAGCTGAGATTATTAA+TGG | 0.292794 | 7_4:-22193184 | Msa1145390:CDS |
| AATTGCTGTTCTTGTAGTTC+AGG | 0.308567 | 7_4:-22192704 | Msa1145390:intron |
| GCCAGACTGATGATTTAATA+GGG | 0.311406 | 7_4:+22191699 | None:intergenic |
| ACCTCAGGCATTATCTCTAT+TGG | 0.324382 | 7_4:-22191812 | Msa1145390:intron |
| ATGCCTTGAATTCTGTTAAT+AGG | 0.329427 | 7_4:-22189778 | Msa1145390:three_prime_UTR |
| CTTTGCTTGACCCAGCTGTT+TGG | 0.337176 | 7_4:+22191677 | None:intergenic |
| GGCCAGACTGATGATTTAAT+AGG | 0.344500 | 7_4:+22191698 | None:intergenic |
| TATTCTAGAGAAAATGAAAT+AGG | 0.347682 | 7_4:-22194242 | Msa1145390:five_prime_UTR |
| CTTCAGAGAACAACAACAAT+TGG | 0.353254 | 7_4:+22189980 | None:intergenic |
| CAATTCTTCTCTATTCCATA+TGG | 0.354928 | 7_4:-22194053 | Msa1145390:CDS |
| ACGAGGAGGAATATGATGTT+AGG | 0.355161 | 7_4:-22191738 | Msa1145390:CDS |
| TGTTCTACTTGAGGCTGCTT+TGG | 0.360243 | 7_4:-22192950 | Msa1145390:CDS |
| CCCTAGATATAAATGGATTC+TGG | 0.363174 | 7_4:+22189667 | None:intergenic |
| AGGAAGAGAGAGGGAAAGAT+GGG | 0.370637 | 7_4:+22193987 | None:intergenic |
| GAGAGGGAAAGATGGGGAAG+AGG | 0.382344 | 7_4:+22193994 | None:intergenic |
| GAGGAAGAGAGAGGGAAAGA+TGG | 0.382471 | 7_4:+22193986 | None:intergenic |
| ATTACCTTTATAGGATCTTC+CGG | 0.382657 | 7_4:-22192800 | Msa1145390:intron |
| AGTTACGAAGCGTGAGTTAC+AGG | 0.389448 | 7_4:-22190192 | Msa1145390:exon |
| CATCTATGCTTTCATGGGTG+TGG | 0.392159 | 7_4:-22193242 | Msa1145390:CDS |
| AGTCGTCAGTGTTGTTGCTT+TGG | 0.401033 | 7_4:-22189698 | Msa1145390:three_prime_UTR |
| TTTCATGGGTGTGGGAATAT+TGG | 0.411137 | 7_4:-22193233 | Msa1145390:CDS |
| GTCGTCAGTGTTGTTGCTTT+GGG | 0.411736 | 7_4:-22189697 | Msa1145390:three_prime_UTR |
| CGAGGAGGAATATGATGTTA+GGG | 0.412606 | 7_4:-22191737 | Msa1145390:CDS |
| ATAATCAAGATATATGTAGA+TGG | 0.417454 | 7_4:-22192732 | Msa1145390:CDS |
| GAAGAAAATTGAGAAATTTG+AGG | 0.418209 | 7_4:+22194094 | None:intergenic |
| GAGGAAACCTCTCTGACGTT+TGG | 0.423049 | 7_4:-22191645 | Msa1145390:CDS |
| CAACCTATTAACAGAATTCA+AGG | 0.431573 | 7_4:+22189775 | None:intergenic |
| ATCTATGCTTTCATGGGTGT+GGG | 0.433519 | 7_4:-22193241 | Msa1145390:CDS |
| CATCAGTCTGGCCAAACAGC+TGG | 0.435710 | 7_4:-22191688 | Msa1145390:CDS |
| CCATATGGATGCTCAATCAA+TGG | 0.438362 | 7_4:-22194038 | Msa1145390:CDS |
| TAGGTTCATCTATGCTTTCA+TGG | 0.442156 | 7_4:-22193248 | Msa1145390:CDS |
| ATTTGACCGGTTGGATCAAC+CGG | 0.443069 | 7_4:+22192781 | None:intergenic |
| AGATGGGGAAGAGGTGGTTG+AGG | 0.445127 | 7_4:+22194003 | None:intergenic |
| ATATCAATCTTCCCGCTCCT+TGG | 0.446220 | 7_4:-22193936 | Msa1145390:intron |
| AAAAGGAGCGAGGAAGAGAG+AGG | 0.448950 | 7_4:+22193977 | None:intergenic |
| AGGGAAAGATGGGGAAGAGG+TGG | 0.462667 | 7_4:+22193997 | None:intergenic |
| TCTACTTGAGGCTGCTTTGG+TGG | 0.469686 | 7_4:-22192947 | Msa1145390:CDS |
| TCATTGCAATTGATCGTCAA+TGG | 0.469786 | 7_4:-22192921 | Msa1145390:CDS |
| CCATTGATTGAGCATCCATA+TGG | 0.473436 | 7_4:+22194038 | None:intergenic |
| TCTCTGACGTTTGGAGTTCA+CGG | 0.484229 | 7_4:-22191636 | Msa1145390:CDS |
| TGATGTTAGGGGTAGAAGTC+GGG | 0.487199 | 7_4:-22191725 | Msa1145390:CDS |
| CATATGGATGCTCAATCAAT+GGG | 0.488996 | 7_4:-22194037 | Msa1145390:CDS |
| TGATATCGGAAGTGAATTGA+GGG | 0.489761 | 7_4:+22193953 | None:intergenic |
| AGGTTCATCTATGCTTTCAT+GGG | 0.492929 | 7_4:-22193247 | Msa1145390:CDS |
| AAAGGAGCGAGGAAGAGAGA+GGG | 0.494567 | 7_4:+22193978 | None:intergenic |
| ATGATGTTAGGGGTAGAAGT+CGG | 0.500274 | 7_4:-22191726 | Msa1145390:CDS |
| AGGAGCGGGAAGATTGATAT+CGG | 0.501407 | 7_4:+22193939 | None:intergenic |
| TTTCTCAATTGAATATGCAC+AGG | 0.502992 | 7_4:-22189823 | Msa1145390:three_prime_UTR |
| CAAGATATATGTAGATGGGT+TGG | 0.507265 | 7_4:-22192727 | Msa1145390:CDS |
| GGAAGTGAATTGAGGGGAAA+AGG | 0.514250 | 7_4:+22193960 | None:intergenic |
| TTGATATCGGAAGTGAATTG+AGG | 0.516331 | 7_4:+22193952 | None:intergenic |
| CCCCTATTAAATCATCAGTC+TGG | 0.532310 | 7_4:-22191700 | Msa1145390:CDS |
| GATCTTCCGGTTGATCCAAC+CGG | 0.532933 | 7_4:-22192787 | Msa1145390:CDS |
| TCGAAGACTCGCAATTTGAC+CGG | 0.535139 | 7_4:+22192768 | None:intergenic |
| AGACTCGCAATTTGACCGGT+TGG | 0.535765 | 7_4:+22192772 | None:intergenic |
| TAATCAAGATATATGTAGAT+GGG | 0.544634 | 7_4:-22192731 | Msa1145390:CDS |
| CAGAGAACAACAACAATTGG+AGG | 0.548932 | 7_4:+22189983 | None:intergenic |
| ATCAGTCTGGCCAAACAGCT+GGG | 0.562826 | 7_4:-22191687 | Msa1145390:CDS |
| AAGGGAACGAACCAAGGAGC+GGG | 0.563976 | 7_4:+22193925 | None:intergenic |
| GAACAACAACAATTGGAGGC+TGG | 0.572929 | 7_4:+22189987 | None:intergenic |
| CAAACAGCTGGGTCAAGCAA+AGG | 0.573654 | 7_4:-22191676 | Msa1145390:CDS |
| TTGTAGTGTGAAATTTAACT+TGG | 0.576278 | 7_4:-22189906 | Msa1145390:three_prime_UTR |
| CACGGCACTTGTTCTACTTG+AGG | 0.578232 | 7_4:-22192959 | Msa1145390:CDS |
| AATTGAGGGGAAAAGGAGCG+AGG | 0.579128 | 7_4:+22193967 | None:intergenic |
| GAAAATTGAGAAATTTGAGG+AGG | 0.582971 | 7_4:+22194097 | None:intergenic |
| GGAAGAGAGAGGGAAAGATG+GGG | 0.582999 | 7_4:+22193988 | None:intergenic |
| AAATTTGAGGAGGAATGCTA+AGG | 0.594373 | 7_4:+22194107 | None:intergenic |
| GAGTTCACGGATGAGAGAGA+AGG | 0.616146 | 7_4:-22191623 | Msa1145390:intron |
| CCAGACTGATGATTTAATAG+GGG | 0.616151 | 7_4:+22191700 | None:intergenic |
| TTGCAGTACGGATTGAACAA+TGG | 0.622871 | 7_4:-22190225 | Msa1145390:intron |
| CCAGTATACAGTACTAATCA+CGG | 0.632085 | 7_4:-22192977 | Msa1145390:intron |
| GAAGGGAACGAACCAAGGAG+CGG | 0.632688 | 7_4:+22193924 | None:intergenic |
| AATTGATCGTCAATGGCAAG+AGG | 0.638943 | 7_4:-22192914 | Msa1145390:intron |
| TCAAGCAAAGGCGATATCAG+AGG | 0.640764 | 7_4:-22191664 | Msa1145390:CDS |
| GATATCGGAAGTGAATTGAG+GGG | 0.647926 | 7_4:+22193954 | None:intergenic |
| TGCTCTTCGAGTAGAAACTG+TGG | 0.685685 | 7_4:+22191771 | None:intergenic |
| GAGGAGGAATATGATGTTAG+GGG | 0.702865 | 7_4:-22191736 | Msa1145390:CDS |
| GTGAACTCCAAACGTCAGAG+AGG | 0.717106 | 7_4:+22191638 | None:intergenic |
| AGCTGTCAAGCAATTCAGTG+TGG | 0.745176 | 7_4:-22190155 | Msa1145390:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTGGTTT+TGG | - | chr7_4:22190227-22190246 | Msa1145390:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTGGTTTT+GGG | - | chr7_4:22190228-22190247 | Msa1145390:intron | 10.0% |
| !! | GTTATTAATTATTATTCATT+TGG | - | chr7_4:22190664-22190683 | Msa1145390:intron | 10.0% |
| !! | ATAGACTATTATTTATATAA+AGG | - | chr7_4:22191380-22191399 | Msa1145390:intron | 10.0% |
| !! | AATAGTATTAATAATAATAC+AGG | - | chr7_4:22193014-22193033 | Msa1145390:intron | 10.0% |
| !! | TGAAGTAAAAAAAACATAAA+AGG | + | chr7_4:22190347-22190366 | None:intergenic | 15.0% |
| !!! | TTTATTTTCATATCTTAGTT+TGG | - | chr7_4:22190863-22190882 | Msa1145390:intron | 15.0% |
| !!! | ATTACAATCATACTTTTTTT+CGG | - | chr7_4:22191563-22191582 | Msa1145390:intron | 15.0% |
| !! | AAAAAAAAACAATTACAACA+AGG | + | chr7_4:22192146-22192165 | None:intergenic | 15.0% |
| !! | TATTAATACTATTCTTTACT+AGG | + | chr7_4:22193007-22193026 | None:intergenic | 15.0% |
| !! | TATTAATACTATTCTTTACT+AGG | + | chr7_4:22193007-22193026 | None:intergenic | 15.0% |
| !! | ACAATAAAAGATATAATTAG+AGG | - | chr7_4:22193159-22193178 | Msa1145390:intron | 15.0% |
| !!! | TCAAAAAAGAAAAAAGCATA+CGG | - | chr7_4:22189716-22189735 | Msa1145390:three_prime_UTR | 20.0% |
| !!! | TATTCTAGAGAAAATGAAAT+AGG | - | chr7_4:22189741-22189760 | Msa1145390:three_prime_UTR | 20.0% |
| !!! | TTTTATTCATACAATTCAGT+TGG | + | chr7_4:22190200-22190219 | None:intergenic | 20.0% |
| !!! | ATGTTGATTATTACCTTTAT+AGG | - | chr7_4:22191174-22191193 | Msa1145390:intron | 20.0% |
| !! | ATAATCAAGATATATGTAGA+TGG | - | chr7_4:22191251-22191270 | Msa1145390:intron | 20.0% |
| !! | TAATCAAGATATATGTAGAT+GGG | - | chr7_4:22191252-22191271 | Msa1145390:intron | 20.0% |
| !! | ATTTATATAAAGGACTGATA+AGG | - | chr7_4:22191390-22191409 | Msa1145390:intron | 20.0% |
| !! | AGATTATATGTAATAGCTAT+TGG | - | chr7_4:22191597-22191616 | Msa1145390:intron | 20.0% |
| !!! | TATTTTGTTAAGGTTGAAAT+AGG | - | chr7_4:22191941-22191960 | Msa1145390:intron | 20.0% |
| !!! | AAAAAAAAAGAAGTACTCAA+AGG | + | chr7_4:22192975-22192994 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAGAAGTACTCAA+AGG | + | chr7_4:22192975-22192994 | None:intergenic | 20.0% |
| !! | AAACTACTATTTGTGTAAAT+AGG | - | chr7_4:22193665-22193684 | Msa1145390:intron | 20.0% |
| !!! | ATAATTTCATTTTTGCAGTA+CGG | - | chr7_4:22193746-22193765 | Msa1145390:intron | 20.0% |
| !!! | AATTTAACTTGGTAGAATTA+AGG | - | chr7_4:22194088-22194107 | Msa1145390:CDS | 20.0% |
| !!! | TCACATTTTTTGATTAAACT+TGG | + | chr7_4:22194265-22194284 | None:intergenic | 20.0% |
| ! | TTCTTTCCAAATCAAAATTC+AGG | - | chr7_4:22189801-22189820 | Msa1145390:three_prime_UTR | 25.0% |
| !!! | CTTTTTCCTGAATTTTGATT+TGG | + | chr7_4:22189810-22189829 | None:intergenic | 25.0% |
| ! | GAAGAAAATTGAGAAATTTG+AGG | + | chr7_4:22189892-22189911 | None:intergenic | 25.0% |
| !! | AATTTTCTTCAAGCATTTGT+TGG | - | chr7_4:22189902-22189921 | Msa1145390:three_prime_UTR | 25.0% |
| ! | AATTGTTACCAATTTACCTA+CGG | - | chr7_4:22190412-22190431 | Msa1145390:intron | 25.0% |
| !!! | GATTTGTTTTGATGTTTTGA+AGG | - | chr7_4:22190642-22190661 | Msa1145390:intron | 25.0% |
| !!! | ATTTTTCACTTGATGATGAT+AGG | - | chr7_4:22190716-22190735 | Msa1145390:intron | 25.0% |
| !!! | GTTAATTTGTGTTGAATACT+TGG | - | chr7_4:22190905-22190924 | Msa1145390:intron | 25.0% |
| !!! | ATGTTTTTAAAGAGAGTATG+GGG | + | chr7_4:22191110-22191129 | None:intergenic | 25.0% |
| !!! | CATGTTTTTAAAGAGAGTAT+GGG | + | chr7_4:22191111-22191130 | None:intergenic | 25.0% |
| ! | ATAGCTATTGGAAATAAAAG+AGG | - | chr7_4:22191609-22191628 | Msa1145390:intron | 25.0% |
| ! | TAGCTATTGGAAATAAAAGA+GGG | - | chr7_4:22191610-22191629 | Msa1145390:intron | 25.0% |
| !! | AGACAAATTAGTTTGAATTG+AGG | - | chr7_4:22191813-22191832 | Msa1145390:intron | 25.0% |
| !!! | CTTTTGATTTCAAACTTTAC+TGG | - | chr7_4:22191851-22191870 | Msa1145390:intron | 25.0% |
| !! | ATATTTGTAAGTATGGACTA+TGG | - | chr7_4:22191885-22191904 | Msa1145390:intron | 25.0% |
| !!! | CTACTCTGTTTATTTTGTTA+AGG | - | chr7_4:22191931-22191950 | Msa1145390:intron | 25.0% |
| !!! | GTTTTTTTTTTTTCAACCTC+AGG | - | chr7_4:22192156-22192175 | Msa1145390:intron | 25.0% |
| !! | TTTTACAATATGACTACAAC+CGG | + | chr7_4:22192498-22192517 | None:intergenic | 25.0% |
| ! | AAAACAGCTTATAAGTTAGA+AGG | - | chr7_4:22192904-22192923 | Msa1145390:intron | 25.0% |
| !!! | TTAGAAGGCATTTTGTTTTT+TGG | - | chr7_4:22192919-22192938 | Msa1145390:CDS | 25.0% |
| !!! | TAGAAGGCATTTTGTTTTTT+GGG | - | chr7_4:22192920-22192939 | Msa1145390:CDS | 25.0% |
| !!! | AATACAGGCATTTTGTTTTT+TGG | - | chr7_4:22193029-22193048 | Msa1145390:intron | 25.0% |
| !!! | ATACAGGCATTTTGTTTTTT+GGG | - | chr7_4:22193030-22193049 | Msa1145390:intron | 25.0% |
| !!! | TCTAATTACCATTTTTACTC+TGG | - | chr7_4:22193454-22193473 | Msa1145390:intron | 25.0% |
| !!! | CTAATTACCATTTTTACTCT+GGG | - | chr7_4:22193455-22193474 | Msa1145390:intron | 25.0% |
| ! | CATTATGATTCATAACAGAA+TGG | - | chr7_4:22193603-22193622 | Msa1145390:intron | 25.0% |
| !!! | TTTTTTCACATTGGTAATGT+TGG | - | chr7_4:22193719-22193738 | Msa1145390:intron | 25.0% |
| ! | TTGTAGTGTGAAATTTAACT+TGG | - | chr7_4:22194077-22194096 | Msa1145390:CDS | 25.0% |
| GAAAATTGAGAAATTTGAGG+AGG | + | chr7_4:22189889-22189908 | None:intergenic | 30.0% | |
| CAATTCTTCTCTATTCCATA+TGG | - | chr7_4:22189930-22189949 | Msa1145390:three_prime_UTR | 30.0% | |
| ATTTGTGAGTGGAAAATGAA+GGG | + | chr7_4:22190079-22190098 | None:intergenic | 30.0% | |
| AATTTGTGAGTGGAAAATGA+AGG | + | chr7_4:22190080-22190099 | None:intergenic | 30.0% | |
| AATTTCATGCAATTTGTGAG+TGG | + | chr7_4:22190090-22190109 | None:intergenic | 30.0% | |
| ! | GCTTGGAGTTAATTTTCAAA+CGG | - | chr7_4:22190314-22190333 | Msa1145390:intron | 30.0% |
| ! | TCAATTATCCTTTTGTGAGT+TGG | - | chr7_4:22190364-22190383 | Msa1145390:intron | 30.0% |
| ! | CAATTATCCTTTTGTGAGTT+GGG | - | chr7_4:22190365-22190384 | Msa1145390:intron | 30.0% |
| ATTGTTACCAATTTACCTAC+GGG | - | chr7_4:22190413-22190432 | Msa1145390:intron | 30.0% | |
| GTCACAGAGAATGAATAATT+TGG | - | chr7_4:22190528-22190547 | Msa1145390:intron | 30.0% | |
| ! | TTTGGTTTACCAGTGTAATT+AGG | - | chr7_4:22190546-22190565 | Msa1145390:intron | 30.0% |
| CAATCTAATCCTAATTACAC+TGG | + | chr7_4:22190558-22190577 | None:intergenic | 30.0% | |
| ATTGCAGCTGAGATTATTAA+TGG | - | chr7_4:22190799-22190818 | Msa1145390:intron | 30.0% | |
| ! | GTTTTGTATCCTACTTAAAG+CGG | - | chr7_4:22190833-22190852 | Msa1145390:intron | 30.0% |
| ! | AATAAAACTCCGCTTTAAGT+AGG | + | chr7_4:22190845-22190864 | None:intergenic | 30.0% |
| AGTTTGGATAATCTCTTGTT+CGG | - | chr7_4:22190879-22190898 | Msa1145390:intron | 30.0% | |
| ! | GTATACTGGCATTTTCAAAA+AGG | + | chr7_4:22190995-22191014 | None:intergenic | 30.0% |
| !! | CCATGTTTTTAAAGAGAGTA+TGG | + | chr7_4:22191112-22191131 | None:intergenic | 30.0% |
| ! | CCATACTCTCTTTAAAAACA+TGG | - | chr7_4:22191109-22191128 | Msa1145390:intron | 30.0% |
| ATACTACAGTCGTTAGAAAA+GGG | + | chr7_4:22191156-22191175 | None:intergenic | 30.0% | |
| ATTACCTTTATAGGATCTTC+CGG | - | chr7_4:22191183-22191202 | Msa1145390:intron | 30.0% | |
| TATATAAAGGACTGATAAGG+TGG | - | chr7_4:22191393-22191412 | Msa1145390:intron | 30.0% | |
| !!! | ATCATACTTTTTTTCGGTTG+TGG | - | chr7_4:22191569-22191588 | Msa1145390:intron | 30.0% |
| AATAAAAGAGGGTAAACCAT+CGG | - | chr7_4:22191621-22191640 | Msa1145390:intron | 30.0% | |
| AGGATCACTAAAATAGTCAT+TGG | + | chr7_4:22191666-22191685 | None:intergenic | 30.0% | |
| TGATCCTTCTTACATATTAG+AGG | - | chr7_4:22191679-22191698 | Msa1145390:CDS | 30.0% | |
| ACTGAATCAATCCAAATGAA+GGG | + | chr7_4:22191789-22191808 | None:intergenic | 30.0% | |
| TGATTTCAAACTTTACTGGT+TGG | - | chr7_4:22191855-22191874 | Msa1145390:intron | 30.0% | |
| ! | GATTTCAAACTTTACTGGTT+GGG | - | chr7_4:22191856-22191875 | Msa1145390:intron | 30.0% |
| GTGCAACATATTTGTAAGTA+TGG | - | chr7_4:22191878-22191897 | Msa1145390:intron | 30.0% | |
| TAAGGTTGAAATAGGAAAAC+AGG | - | chr7_4:22191949-22191968 | Msa1145390:intron | 30.0% | |
| !!! | ATGAATGAAAGGCATTTTCT+GGG | - | chr7_4:22192106-22192125 | Msa1145390:intron | 30.0% |
| GTCATGTGCATAATCATTAA+TGG | - | chr7_4:22192409-22192428 | Msa1145390:intron | 30.0% | |
| GTCAAGAGTTTGTAAAATAG+AGG | - | chr7_4:22192467-22192486 | Msa1145390:intron | 30.0% | |
| ! | TATTGTAAAAGTATGTGCCA+TGG | - | chr7_4:22192508-22192527 | Msa1145390:intron | 30.0% |
| TTTGCAAATCGAAGTTTGAA+TGG | + | chr7_4:22192708-22192727 | None:intergenic | 30.0% | |
| !!! | AAGCTGTTTTTCTGTACATT+GGG | + | chr7_4:22192894-22192913 | None:intergenic | 30.0% |
| !!! | TAAGCTGTTTTTCTGTACAT+TGG | + | chr7_4:22192895-22192914 | None:intergenic | 30.0% |
| !!! | AGAAGGCATTTTGTTTTTTG+GGG | - | chr7_4:22192921-22192940 | Msa1145390:CDS | 30.0% |
| GGTTGAATAAACAGCTTATT+AGG | - | chr7_4:22192942-22192961 | Msa1145390:CDS | 30.0% | |
| ATAAACAGCTTATTAGGCAT+TGG | - | chr7_4:22192948-22192967 | Msa1145390:CDS | 30.0% | |
| TAAACAGCTTATTAGGCATT+GGG | - | chr7_4:22192949-22192968 | Msa1145390:CDS | 30.0% | |
| !!! | TACAGGCATTTTGTTTTTTG+GGG | - | chr7_4:22193031-22193050 | Msa1145390:intron | 30.0% |
| GGTTGAATAAACAGCTTATT+AGG | - | chr7_4:22192942-22192961 | Msa1145390:CDS | 30.0% | |
| ATAAACAGCTTATTAGGCAT+TGG | - | chr7_4:22192948-22192967 | Msa1145390:CDS | 30.0% | |
| TAAACAGCTTATTAGGCATT+GGG | - | chr7_4:22192949-22192968 | Msa1145390:CDS | 30.0% | |
| ! | TTGCAATTTTGTCCTTTAGT+AGG | - | chr7_4:22193232-22193251 | Msa1145390:CDS | 30.0% |
| ! | TCAAAACTTTCAAGCTGTTT+TGG | - | chr7_4:22193357-22193376 | Msa1145390:intron | 30.0% |
| !!! | ACATTGGTGTTTTTTCACAT+TGG | - | chr7_4:22193710-22193729 | Msa1145390:intron | 30.0% |
| !! | GAATCTCGTTTTTGTATTCT+GGG | - | chr7_4:22194110-22194129 | Msa1145390:CDS | 30.0% |
| !! | AATCTCGTTTTTGTATTCTG+GGG | - | chr7_4:22194111-22194130 | Msa1145390:CDS | 30.0% |
| TTTCTCAATTGAATATGCAC+AGG | - | chr7_4:22194160-22194179 | Msa1145390:five_prime_UTR | 30.0% | |
| ATGCCTTGAATTCTGTTAAT+AGG | - | chr7_4:22194205-22194224 | Msa1145390:five_prime_UTR | 30.0% | |
| CAACCTATTAACAGAATTCA+AGG | + | chr7_4:22194211-22194230 | None:intergenic | 30.0% | |
| TAAACTTGGCTCAAAAAATC+TGG | + | chr7_4:22194251-22194270 | None:intergenic | 30.0% | |
| AAATTTGAGGAGGAATGCTA+AGG | + | chr7_4:22189879-22189898 | None:intergenic | 35.0% | |
| CATATGGATGCTCAATCAAT+GGG | - | chr7_4:22189946-22189965 | Msa1145390:three_prime_UTR | 35.0% | |
| TGATATCGGAAGTGAATTGA+GGG | + | chr7_4:22190033-22190052 | None:intergenic | 35.0% | |
| TTGATATCGGAAGTGAATTG+AGG | + | chr7_4:22190034-22190053 | None:intergenic | 35.0% | |
| TGCAGAGACATTTGATATGT+CGG | + | chr7_4:22190173-22190192 | None:intergenic | 35.0% | |
| ATGAACTACTTTGTCATGCT+TGG | - | chr7_4:22190297-22190316 | Msa1145390:intron | 35.0% | |
| ATAATCACCCAACTCACAAA+AGG | + | chr7_4:22190375-22190394 | None:intergenic | 35.0% | |
| !! | TTTTGTGAGTTGGGTGATTA+TGG | - | chr7_4:22190374-22190393 | Msa1145390:intron | 35.0% |
| TTGTTACCAATTTACCTACG+GGG | - | chr7_4:22190414-22190433 | Msa1145390:intron | 35.0% | |
| AGAGCAAATTATGTTGCAAG+AGG | - | chr7_4:22190455-22190474 | Msa1145390:intron | 35.0% | |
| TAGGTTCATCTATGCTTTCA+TGG | - | chr7_4:22190735-22190754 | Msa1145390:intron | 35.0% | |
| AGGTTCATCTATGCTTTCAT+GGG | - | chr7_4:22190736-22190755 | Msa1145390:intron | 35.0% | |
| ! | TGGCATTTTCAAAAAGGTCA+AGG | + | chr7_4:22190989-22191008 | None:intergenic | 35.0% |
| CCAGTATACAGTACTAATCA+CGG | - | chr7_4:22191006-22191025 | Msa1145390:intron | 35.0% | |
| TCATTGCAATTGATCGTCAA+TGG | - | chr7_4:22191062-22191081 | Msa1145390:intron | 35.0% | |
| CATACTACAGTCGTTAGAAA+AGG | + | chr7_4:22191157-22191176 | None:intergenic | 35.0% | |
| CAAGATATATGTAGATGGGT+TGG | - | chr7_4:22191256-22191275 | Msa1145390:intron | 35.0% | |
| ! | AATTGCTGTTCTTGTAGTTC+AGG | - | chr7_4:22191279-22191298 | Msa1145390:intron | 35.0% |
| ATGAGTGGTCACAAAAAAGT+AGG | + | chr7_4:22191343-22191362 | None:intergenic | 35.0% | |
| !!! | ACTTTTTTGTGACCACTCAT+TGG | - | chr7_4:22191343-22191362 | Msa1145390:intron | 35.0% |
| !! | TCAGCTGTTACTTTGTTAGT+AGG | + | chr7_4:22191493-22191512 | None:intergenic | 35.0% |
| AACGCCTCTAATATGTAAGA+AGG | + | chr7_4:22191686-22191705 | None:intergenic | 35.0% | |
| CTGAATCAATCCAAATGAAG+GGG | + | chr7_4:22191788-22191807 | None:intergenic | 35.0% | |
| CACTGAATCAATCCAAATGA+AGG | + | chr7_4:22191790-22191809 | None:intergenic | 35.0% | |
| GTTTGAATTGAGGAGATGAT+AGG | - | chr7_4:22191823-22191842 | Msa1145390:intron | 35.0% | |
| CATACACAATTAAATGTGCC+AGG | + | chr7_4:22192004-22192023 | None:intergenic | 35.0% | |
| AATTGCACTGCATGAATGAA+AGG | - | chr7_4:22192095-22192114 | Msa1145390:intron | 35.0% | |
| !!! | CATGAATGAAAGGCATTTTC+TGG | - | chr7_4:22192105-22192124 | Msa1145390:intron | 35.0% |
| CCAGACTGATGATTTAATAG+GGG | + | chr7_4:22192286-22192305 | None:intergenic | 35.0% | |
| GCCAGACTGATGATTTAATA+GGG | + | chr7_4:22192287-22192306 | None:intergenic | 35.0% | |
| ATCGTAAACAAAACTGTGCT+TGG | - | chr7_4:22192607-22192626 | Msa1145390:intron | 35.0% | |
| TCGTAAACAAAACTGTGCTT+GGG | - | chr7_4:22192608-22192627 | Msa1145390:intron | 35.0% | |
| GTCAACTATCCCTTTAGATT+AGG | - | chr7_4:22192829-22192848 | Msa1145390:intron | 35.0% | |
| TATCCCTTTAGATTAGGTCT+AGG | - | chr7_4:22192835-22192854 | Msa1145390:intron | 35.0% | |
| TGACCTAGACCTAATCTAAA+GGG | + | chr7_4:22192841-22192860 | None:intergenic | 35.0% | |
| ATGACCTAGACCTAATCTAA+AGG | + | chr7_4:22192842-22192861 | None:intergenic | 35.0% | |
| TTTAGATTAGGTCTAGGTCA+TGG | - | chr7_4:22192841-22192860 | Msa1145390:intron | 35.0% | |
| TTTGCATCCCAGAGTAAAAA+TGG | + | chr7_4:22193465-22193484 | None:intergenic | 35.0% | |
| CAAACCACAAACCAAAAAGA+AGG | + | chr7_4:22193930-22193949 | None:intergenic | 35.0% | |
| CTTCAGAGAACAACAACAAT+TGG | + | chr7_4:22194006-22194025 | None:intergenic | 35.0% | |
| !! | GGAATCTCGTTTTTGTATTC+TGG | - | chr7_4:22194109-22194128 | Msa1145390:CDS | 35.0% |
| !!! | AGTCGCATTTTTAGGGTTTC+TGG | + | chr7_4:22189839-22189858 | None:intergenic | 40.0% |
| ! | GCAATGGAGTCGCATTTTTA+GGG | + | chr7_4:22189846-22189865 | None:intergenic | 40.0% |
| ! | AGCAATGGAGTCGCATTTTT+AGG | + | chr7_4:22189847-22189866 | None:intergenic | 40.0% |
| CTAAGGAAAAATGGCAGCAA+TGG | + | chr7_4:22189862-22189881 | None:intergenic | 40.0% | |
| GGAGGAATGCTAAGGAAAAA+TGG | + | chr7_4:22189871-22189890 | None:intergenic | 40.0% | |
| ! | CCATTGATTGAGCATCCATA+TGG | + | chr7_4:22189948-22189967 | None:intergenic | 40.0% |
| CCATATGGATGCTCAATCAA+TGG | - | chr7_4:22189945-22189964 | Msa1145390:three_prime_UTR | 40.0% | |
| GATATCGGAAGTGAATTGAG+GGG | + | chr7_4:22190032-22190051 | None:intergenic | 40.0% | |
| AAAATGAAGGGAACGAACCA+AGG | + | chr7_4:22190067-22190086 | None:intergenic | 40.0% | |
| CAGAGACATTTGATATGTCG+GGG | + | chr7_4:22190171-22190190 | None:intergenic | 40.0% | |
| GCAGAGACATTTGATATGTC+GGG | + | chr7_4:22190172-22190191 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTTTGGGTACTGTG+AGG | - | chr7_4:22190238-22190257 | Msa1145390:intron | 40.0% |
| TGTTACCAATTTACCTACGG+GGG | - | chr7_4:22190415-22190434 | Msa1145390:intron | 40.0% | |
| GAATCTACACTGCTTCTTTG+TGG | - | chr7_4:22190620-22190639 | Msa1145390:intron | 40.0% | |
| ATCTATGCTTTCATGGGTGT+GGG | - | chr7_4:22190742-22190761 | Msa1145390:intron | 40.0% | |
| TTTCATGGGTGTGGGAATAT+TGG | - | chr7_4:22190750-22190769 | Msa1145390:intron | 40.0% | |
| CCGTGATTAGTACTGTATAC+TGG | + | chr7_4:22191009-22191028 | None:intergenic | 40.0% | |
| AATTGATCGTCAATGGCAAG+AGG | - | chr7_4:22191069-22191088 | Msa1145390:intron | 40.0% | |
| ! | TTTAAAGAGAGTATGGGGTG+AGG | + | chr7_4:22191105-22191124 | None:intergenic | 40.0% |
| TCAACCGGAAGATCCTATAA+AGG | + | chr7_4:22191190-22191209 | None:intergenic | 40.0% | |
| !! | TTTCTGCTGCCTTTTGCTAT+TGG | - | chr7_4:22191310-22191329 | Msa1145390:intron | 40.0% |
| !!! | TGCCTTTTGCTATTGGCATT+TGG | - | chr7_4:22191317-22191336 | Msa1145390:intron | 40.0% |
| CTTACTCGTTTACCAATGAG+TGG | + | chr7_4:22191358-22191377 | None:intergenic | 40.0% | |
| TAAGGTGGCTTAGTGGTTTA+AGG | - | chr7_4:22191408-22191427 | Msa1145390:intron | 40.0% | |
| AAGGTGGCTTAGTGGTTTAA+GGG | - | chr7_4:22191409-22191428 | Msa1145390:intron | 40.0% | |
| ! | ACTCGTTGGAGTGATAATGA+AGG | - | chr7_4:22191450-22191469 | Msa1145390:intron | 40.0% |
| ! | CTCGTTGGAGTGATAATGAA+GGG | - | chr7_4:22191451-22191470 | Msa1145390:intron | 40.0% |
| GAAGATTCAGTGTACACTCA+TGG | + | chr7_4:22191722-22191741 | None:intergenic | 40.0% | |
| CTAGATGGATGAACTTCGTA+GGG | + | chr7_4:22191746-22191765 | None:intergenic | 40.0% | |
| TCTAGATGGATGAACTTCGT+AGG | + | chr7_4:22191747-22191766 | None:intergenic | 40.0% | |
| !! | GGAGCAAGAAAAGTTCTAGA+TGG | + | chr7_4:22191761-22191780 | None:intergenic | 40.0% |
| ACCTCAGGCATTATCTCTAT+TGG | - | chr7_4:22192171-22192190 | Msa1145390:intron | 40.0% | |
| ACCAATAGAGATAATGCCTG+AGG | + | chr7_4:22192175-22192194 | None:intergenic | 40.0% | |
| !!! | AAGAGCAGATTTTGATGACG+AGG | - | chr7_4:22192228-22192247 | Msa1145390:intron | 40.0% |
| ACGAGGAGGAATATGATGTT+AGG | - | chr7_4:22192245-22192264 | Msa1145390:intron | 40.0% | |
| CGAGGAGGAATATGATGTTA+GGG | - | chr7_4:22192246-22192265 | Msa1145390:intron | 40.0% | |
| GAGGAGGAATATGATGTTAG+GGG | - | chr7_4:22192247-22192266 | Msa1145390:intron | 40.0% | |
| ATGATGTTAGGGGTAGAAGT+CGG | - | chr7_4:22192257-22192276 | Msa1145390:intron | 40.0% | |
| CCCCTATTAAATCATCAGTC+TGG | - | chr7_4:22192283-22192302 | Msa1145390:intron | 40.0% | |
| GGCCAGACTGATGATTTAAT+AGG | + | chr7_4:22192288-22192307 | None:intergenic | 40.0% | |
| TTGTAAAATAGAGGCTGAGC+CGG | - | chr7_4:22192476-22192495 | Msa1145390:intron | 40.0% | |
| ! | TGATCAAGGTCGAGTTTTCT+AGG | - | chr7_4:22192580-22192599 | Msa1145390:intron | 40.0% |
| ATGGAGCGAGAACGAATTTA+GGG | + | chr7_4:22192689-22192708 | None:intergenic | 40.0% | |
| AATGGAGCGAGAACGAATTT+AGG | + | chr7_4:22192690-22192709 | None:intergenic | 40.0% | |
| TTCTGTACATTGGGCCTTAA+GGG | + | chr7_4:22192885-22192904 | None:intergenic | 40.0% | |
| TTTCTGTACATTGGGCCTTA+AGG | + | chr7_4:22192886-22192905 | None:intergenic | 40.0% | |
| GATTGGTAAGCTCCTACTAA+AGG | + | chr7_4:22193247-22193266 | None:intergenic | 40.0% | |
| ATGAAAGATCGGAACACGAT+TGG | + | chr7_4:22193264-22193283 | None:intergenic | 40.0% | |
| ATCGTGTTCCGATCTTTCAT+CGG | - | chr7_4:22193264-22193283 | Msa1145390:intron | 40.0% | |
| TCAAACACGAGATTGCAAGT+AGG | + | chr7_4:22193299-22193318 | None:intergenic | 40.0% | |
| ATCTCGTGTTTGACTACACT+TGG | - | chr7_4:22193306-22193325 | Msa1145390:intron | 40.0% | |
| ACCAATATGAGTGTGTTCTG+CGG | - | chr7_4:22193485-22193504 | Msa1145390:intron | 40.0% | |
| ! | TTGCAGTACGGATTGAACAA+TGG | - | chr7_4:22193758-22193777 | Msa1145390:intron | 40.0% |
| !! | AAGAAGGAGAGGTGTGTTTT+TGG | + | chr7_4:22193914-22193933 | None:intergenic | 40.0% |
| ! | AACACACCTCTCCTTCTTTT+TGG | - | chr7_4:22193916-22193935 | Msa1145390:intron | 40.0% |
| CACAAACCAAAAAGAAGGAG+AGG | + | chr7_4:22193925-22193944 | None:intergenic | 40.0% | |
| !!! | CTCTCCTTCTTTTTGGTTTG+TGG | - | chr7_4:22193923-22193942 | Msa1145390:intron | 40.0% |
| CAGAGAACAACAACAATTGG+AGG | + | chr7_4:22194003-22194022 | None:intergenic | 40.0% | |
| ! | TCTCAGTTCTGCACAGATTT+TGG | - | chr7_4:22194030-22194049 | Msa1145390:CDS | 40.0% |
| AGGAAGAGAGAGGGAAAGAT+GGG | + | chr7_4:22189999-22190018 | None:intergenic | 45.0% | |
| GGAAGTGAATTGAGGGGAAA+AGG | + | chr7_4:22190026-22190045 | None:intergenic | 45.0% | |
| AGGAGCGGGAAGATTGATAT+CGG | + | chr7_4:22190047-22190066 | None:intergenic | 45.0% | |
| ATATCAATCTTCCCGCTCCT+TGG | - | chr7_4:22190047-22190066 | Msa1145390:three_prime_UTR | 45.0% | |
| GTCGGGGTGTAGATAATTCT+CGG | + | chr7_4:22190155-22190174 | None:intergenic | 45.0% | |
| GTTACCAATTTACCTACGGG+GGG | - | chr7_4:22190416-22190435 | Msa1145390:intron | 45.0% | |
| ! | CTGTAAAGACTAGTCACTCG+AGG | + | chr7_4:22190504-22190523 | None:intergenic | 45.0% |
| CATCTATGCTTTCATGGGTG+TGG | - | chr7_4:22190741-22190760 | Msa1145390:intron | 45.0% | |
| GTGTGCTGCATTGCTTTCTT+TGG | - | chr7_4:22190772-22190791 | Msa1145390:intron | 45.0% | |
| TGTTCTACTTGAGGCTGCTT+TGG | - | chr7_4:22191033-22191052 | Msa1145390:intron | 45.0% | |
| ATTTGACCGGTTGGATCAAC+CGG | + | chr7_4:22191205-22191224 | None:intergenic | 45.0% | |
| TCGAAGACTCGCAATTTGAC+CGG | + | chr7_4:22191218-22191237 | None:intergenic | 45.0% | |
| GGCCAAATGCCAATAGCAAA+AGG | + | chr7_4:22191322-22191341 | None:intergenic | 45.0% | |
| AGGTGGCTTAGTGGTTTAAG+GGG | - | chr7_4:22191410-22191429 | Msa1145390:intron | 45.0% | |
| !! | TACTCTGAAGTCTGAACCGA+TGG | + | chr7_4:22191640-22191659 | None:intergenic | 45.0% |
| CAATCCAAATGAAGGGGAGA+GGG | + | chr7_4:22191782-22191801 | None:intergenic | 45.0% | |
| TCAATCCAAATGAAGGGGAG+AGG | + | chr7_4:22191783-22191802 | None:intergenic | 45.0% | |
| ! | CCAGGCAAAGCGTTTAATCT+AGG | + | chr7_4:22191986-22192005 | None:intergenic | 45.0% |
| CCTAGATTAAACGCTTTGCC+TGG | - | chr7_4:22191983-22192002 | Msa1145390:intron | 45.0% | |
| TGCTCTTCGAGTAGAAACTG+TGG | + | chr7_4:22192215-22192234 | None:intergenic | 45.0% | |
| !!! | AGCAGATTTTGATGACGAGG+AGG | - | chr7_4:22192231-22192250 | Msa1145390:intron | 45.0% |
| TGATGTTAGGGGTAGAAGTC+GGG | - | chr7_4:22192258-22192277 | Msa1145390:intron | 45.0% | |
| TCAAGCAAAGGCGATATCAG+AGG | - | chr7_4:22192319-22192338 | Msa1145390:intron | 45.0% | |
| ! | TCTCTGACGTTTGGAGTTCA+CGG | - | chr7_4:22192347-22192366 | Msa1145390:intron | 45.0% |
| ! | AGAGAAGGTATGCTACTCTG+AGG | - | chr7_4:22192375-22192394 | Msa1145390:intron | 45.0% |
| ATCTGAGAAGGATCGCTGTT+CGG | - | chr7_4:22192549-22192568 | Msa1145390:intron | 45.0% | |
| GTTCGGTCAGTTCATGATCA+AGG | - | chr7_4:22192566-22192585 | Msa1145390:intron | 45.0% | |
| ! | TGTGCTTGGGTCACTGTTTT+GGG | - | chr7_4:22192621-22192640 | Msa1145390:intron | 45.0% |
| GTCGGGTTTGGGGAAAAAAT+TGG | - | chr7_4:22192643-22192662 | Msa1145390:intron | 45.0% | |
| GATTAGGTCTAGGTCATGGT+TGG | - | chr7_4:22192845-22192864 | Msa1145390:intron | 45.0% | |
| TCATGGTTGGAGACAAAGTC+TGG | - | chr7_4:22192858-22192877 | Msa1145390:intron | 45.0% | |
| CATGGTTGGAGACAAAGTCT+GGG | - | chr7_4:22192859-22192878 | Msa1145390:intron | 45.0% | |
| AGATTGCAAGTAGGACTGGA+AGG | + | chr7_4:22193290-22193309 | None:intergenic | 45.0% | |
| ACCGCAGAACACACTCATAT+TGG | + | chr7_4:22193489-22193508 | None:intergenic | 45.0% | |
| CGCAATAGACAACACTGAAC+AGG | + | chr7_4:22193552-22193571 | None:intergenic | 45.0% | |
| CAGAGTCTGCTCGATTACAT+TGG | - | chr7_4:22193694-22193713 | Msa1145390:intron | 45.0% | |
| AGTTACGAAGCGTGAGTTAC+AGG | - | chr7_4:22193791-22193810 | Msa1145390:intron | 45.0% | |
| AGCTGTCAAGCAATTCAGTG+TGG | - | chr7_4:22193828-22193847 | Msa1145390:intron | 45.0% | |
| GAACAACAACAATTGGAGGC+TGG | + | chr7_4:22193999-22194018 | None:intergenic | 45.0% | |
| !!! | CGTTTTTGTATTCTGGGGTG+AGG | - | chr7_4:22194116-22194135 | Msa1145390:CDS | 45.0% |
| ! | AGTCGTCAGTGTTGTTGCTT+TGG | - | chr7_4:22194285-22194304 | Msa1145390:five_prime_UTR | 45.0% |
| !! | GTCGTCAGTGTTGTTGCTTT+GGG | - | chr7_4:22194286-22194305 | Msa1145390:five_prime_UTR | 45.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+TGG | - | chr7_4:22190221-22190240 | Msa1145390:CDS | 5.0% |
| GGAAGAGAGAGGGAAAGATG+GGG | + | chr7_4:22189998-22190017 | None:intergenic | 50.0% | |
| GAGGAAGAGAGAGGGAAAGA+TGG | + | chr7_4:22190000-22190019 | None:intergenic | 50.0% | |
| AAAGGAGCGAGGAAGAGAGA+GGG | + | chr7_4:22190008-22190027 | None:intergenic | 50.0% | |
| AAAAGGAGCGAGGAAGAGAG+AGG | + | chr7_4:22190009-22190028 | None:intergenic | 50.0% | |
| AATTGAGGGGAAAAGGAGCG+AGG | + | chr7_4:22190019-22190038 | None:intergenic | 50.0% | |
| CACGGCACTTGTTCTACTTG+AGG | - | chr7_4:22191024-22191043 | Msa1145390:intron | 50.0% | |
| ! | TCTACTTGAGGCTGCTTTGG+TGG | - | chr7_4:22191036-22191055 | Msa1145390:intron | 50.0% |
| GATCTTCCGGTTGATCCAAC+CGG | - | chr7_4:22191196-22191215 | Msa1145390:intron | 50.0% | |
| AGACTCGCAATTTGACCGGT+TGG | + | chr7_4:22191214-22191233 | None:intergenic | 50.0% | |
| GGACTGATAAGGTGGCTTAG+TGG | - | chr7_4:22191401-22191420 | Msa1145390:intron | 50.0% | |
| GGCTTAGTGGTTTAAGGGGT+CGG | - | chr7_4:22191414-22191433 | Msa1145390:intron | 50.0% | |
| TGGTTTAAGGGGTCGGACAT+AGG | - | chr7_4:22191421-22191440 | Msa1145390:intron | 50.0% | |
| GGTTTAAGGGGTCGGACATA+GGG | - | chr7_4:22191422-22191441 | Msa1145390:intron | 50.0% | |
| GTTTAAGGGGTCGGACATAG+GGG | - | chr7_4:22191423-22191442 | Msa1145390:intron | 50.0% | |
| ATCAGTCTGGCCAAACAGCT+GGG | - | chr7_4:22192296-22192315 | Msa1145390:intron | 50.0% | |
| CTTTGCTTGACCCAGCTGTT+TGG | + | chr7_4:22192309-22192328 | None:intergenic | 50.0% | |
| CAAACAGCTGGGTCAAGCAA+AGG | - | chr7_4:22192307-22192326 | Msa1145390:intron | 50.0% | |
| GAGGAAACCTCTCTGACGTT+TGG | - | chr7_4:22192338-22192357 | Msa1145390:intron | 50.0% | |
| GTGAACTCCAAACGTCAGAG+AGG | + | chr7_4:22192348-22192367 | None:intergenic | 50.0% | |
| GAGTTCACGGATGAGAGAGA+AGG | - | chr7_4:22192360-22192379 | Msa1145390:intron | 50.0% | |
| TCTCAGATCGCAGCACACTA+CGG | + | chr7_4:22192537-22192556 | None:intergenic | 50.0% | |
| TAGTGTGCTGCGATCTGAGA+AGG | - | chr7_4:22192537-22192556 | Msa1145390:intron | 50.0% | |
| ! | CTGTGCTTGGGTCACTGTTT+TGG | - | chr7_4:22192620-22192639 | Msa1145390:intron | 50.0% |
| !! | CTTGGGTCACTGTTTTGGGT+CGG | - | chr7_4:22192625-22192644 | Msa1145390:intron | 50.0% |
| !! | TTGGGTCACTGTTTTGGGTC+GGG | - | chr7_4:22192626-22192645 | Msa1145390:intron | 50.0% |
| !! | TCACTGTTTTGGGTCGGGTT+TGG | - | chr7_4:22192631-22192650 | Msa1145390:intron | 50.0% |
| !! | CACTGTTTTGGGTCGGGTTT+GGG | - | chr7_4:22192632-22192651 | Msa1145390:intron | 50.0% |
| !! | ACTGTTTTGGGTCGGGTTTG+GGG | - | chr7_4:22192633-22192652 | Msa1145390:intron | 50.0% |
| GGGACAGCATCACAGGTTAA+GGG | + | chr7_4:22192738-22192757 | None:intergenic | 50.0% | |
| ! | AGAGGAGATTTTGCGCAGCA+GGG | + | chr7_4:22192775-22192794 | None:intergenic | 50.0% |
| ! | AAGAGGAGATTTTGCGCAGC+AGG | + | chr7_4:22192776-22192795 | None:intergenic | 50.0% |
| AGACAAAGTCTGGGCCCTTA+AGG | - | chr7_4:22192868-22192887 | Msa1145390:intron | 50.0% | |
| CTGGAAGGCCGATGAAAGAT+CGG | + | chr7_4:22193275-22193294 | None:intergenic | 50.0% | |
| CACGAGATTGCAAGTAGGAC+TGG | + | chr7_4:22193294-22193313 | None:intergenic | 50.0% | |
| TCTGCGGTGTGTCATGGTTA+AGG | - | chr7_4:22193501-22193520 | Msa1145390:intron | 50.0% | |
| AGATGGGGAAGAGGTGGTTG+AGG | + | chr7_4:22189983-22190002 | None:intergenic | 55.0% | |
| AGGGAAAGATGGGGAAGAGG+TGG | + | chr7_4:22189989-22190008 | None:intergenic | 55.0% | |
| GAGAGGGAAAGATGGGGAAG+AGG | + | chr7_4:22189992-22190011 | None:intergenic | 55.0% | |
| AAGGGAACGAACCAAGGAGC+GGG | + | chr7_4:22190061-22190080 | None:intergenic | 55.0% | |
| GAAGGGAACGAACCAAGGAG+CGG | + | chr7_4:22190062-22190081 | None:intergenic | 55.0% | |
| CCAACCCCCCGTAGGTAAAT+TGG | + | chr7_4:22190423-22190442 | None:intergenic | 55.0% | |
| CCAATTTACCTACGGGGGGT+TGG | - | chr7_4:22190420-22190439 | Msa1145390:intron | 55.0% | |
| GACATAGGGGTTGGACTCGT+TGG | - | chr7_4:22191436-22191455 | Msa1145390:intron | 55.0% | |
| TGCTCCCTCTCCCCTTCATT+TGG | - | chr7_4:22191775-22191794 | Msa1145390:CDS | 55.0% | |
| CATCAGTCTGGCCAAACAGC+TGG | - | chr7_4:22192295-22192314 | Msa1145390:intron | 55.0% | |
| GGGGACAGCATCACAGGTTA+AGG | + | chr7_4:22192739-22192758 | None:intergenic | 55.0% | |
| CCAGCAGCAAGGAACGAAAG+AGG | + | chr7_4:22192793-22192812 | None:intergenic | 55.0% | |
| CCTCTTTCGTTCCTTGCTGC+TGG | - | chr7_4:22192790-22192809 | Msa1145390:CDS | 55.0% | |
| CCTCACACAAACCAGCAGCA+AGG | + | chr7_4:22192804-22192823 | None:intergenic | 55.0% | |
| !! | CCTTGCTGCTGGTTTGTGTG+AGG | - | chr7_4:22192801-22192820 | Msa1145390:intron | 55.0% |
| !! | TGCTGCTGGTTTGTGTGAGG+CGG | - | chr7_4:22192804-22192823 | Msa1145390:intron | 55.0% |
| GTGTGTTCTGCGGTGTGTCA+TGG | - | chr7_4:22193495-22193514 | Msa1145390:intron | 55.0% | |
| CACTAGAACCAACCCCCCGT+AGG | + | chr7_4:22190431-22190450 | None:intergenic | 60.0% | |
| !! | CTACGGGGGGTTGGTTCTAG+TGG | - | chr7_4:22190429-22190448 | Msa1145390:intron | 60.0% |
| AAGGGGTCGGACATAGGGGT+TGG | - | chr7_4:22191427-22191446 | Msa1145390:intron | 60.0% | |
| GATTGGGGGGACAGCATCAC+AGG | + | chr7_4:22192745-22192764 | None:intergenic | 60.0% | |
| AGCAGGGACGAAGCGATTGG+GGG | + | chr7_4:22192759-22192778 | None:intergenic | 60.0% | |
| CAGCAGGGACGAAGCGATTG+GGG | + | chr7_4:22192760-22192779 | None:intergenic | 60.0% | |
| GCAGCAGGGACGAAGCGATT+GGG | + | chr7_4:22192761-22192780 | None:intergenic | 60.0% | |
| !! | TGCTGGTTTGTGTGAGGCGG+CGG | - | chr7_4:22192807-22192826 | Msa1145390:intron | 60.0% |
| GCAGCACACTACGGCAGCCA+TGG | + | chr7_4:22192528-22192547 | None:intergenic | 65.0% | |
| GCAGGGACGAAGCGATTGGG+GGG | + | chr7_4:22192758-22192777 | None:intergenic | 65.0% | |
| CGCAGCAGGGACGAAGCGAT+TGG | + | chr7_4:22192762-22192781 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 22189676 | 22194329 | 22189676 | ID=Msa1145390;Name=Msa1145390 |
| chr7_4 | mRNA | 22189676 | 22194329 | 22189676 | ID=Msa1145390-mRNA-1;Parent=Msa1145390;Name=Msa1145390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=175|1|1|1|1|1|6|524|249 |
| chr7_4 | exon | 22189676 | 22190241 | 22189676 | ID=Msa1145390-mRNA-1:exon:5478;Parent=Msa1145390-mRNA-1 |
| chr7_4 | exon | 22191624 | 22191827 | 22191624 | ID=Msa1145390-mRNA-1:exon:5477;Parent=Msa1145390-mRNA-1 |
| chr7_4 | exon | 22192705 | 22192809 | 22192705 | ID=Msa1145390-mRNA-1:exon:5476;Parent=Msa1145390-mRNA-1 |
| chr7_4 | exon | 22192915 | 22192995 | 22192915 | ID=Msa1145390-mRNA-1:exon:5475;Parent=Msa1145390-mRNA-1 |
| chr7_4 | exon | 22193168 | 22193267 | 22193168 | ID=Msa1145390-mRNA-1:exon:5474;Parent=Msa1145390-mRNA-1 |
| chr7_4 | exon | 22193937 | 22194329 | 22193937 | ID=Msa1145390-mRNA-1:exon:5473;Parent=Msa1145390-mRNA-1 |
| chr7_4 | five_prime_UTR | 22194155 | 22194329 | 22194155 | ID=Msa1145390-mRNA-1:five_prime_utr;Parent=Msa1145390-mRNA-1 |
| chr7_4 | CDS | 22193937 | 22194154 | 22193937 | ID=Msa1145390-mRNA-1:cds;Parent=Msa1145390-mRNA-1 |
| chr7_4 | CDS | 22193168 | 22193267 | 22193168 | ID=Msa1145390-mRNA-1:cds;Parent=Msa1145390-mRNA-1 |
| chr7_4 | CDS | 22192915 | 22192995 | 22192915 | ID=Msa1145390-mRNA-1:cds;Parent=Msa1145390-mRNA-1 |
| chr7_4 | CDS | 22192705 | 22192809 | 22192705 | ID=Msa1145390-mRNA-1:cds;Parent=Msa1145390-mRNA-1 |
| chr7_4 | CDS | 22191624 | 22191827 | 22191624 | ID=Msa1145390-mRNA-1:cds;Parent=Msa1145390-mRNA-1 |
| chr7_4 | CDS | 22190200 | 22190241 | 22190200 | ID=Msa1145390-mRNA-1:cds;Parent=Msa1145390-mRNA-1 |
| chr7_4 | three_prime_UTR | 22189676 | 22190199 | 22189676 | ID=Msa1145390-mRNA-1:three_prime_utr;Parent=Msa1145390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
