Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145450 | AFK42692.1 | 94.755 | 591 | 22 | 3 | 1 | 590 | 1 | 583 | 0.0 | 1134 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145450 | sp|F4I8I0|SUN4_ARATH | 42.308 | 598 | 310 | 9 | 23 | 605 | 19 | 596 | 7.35e-149 | 445 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145450 | I3SR00 | 94.755 | 591 | 22 | 3 | 1 | 590 | 1 | 583 | 0.0 | 1134 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0167710 | Msa1145450 | 0.881100 | 3.176553e-70 | -8.615850e-47 |
Msa1145450 | Msa1375200 | 0.907171 | 6.761271e-81 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145450 | MtrunA17_Chr1g0183121 | 94.755 | 591 | 22 | 3 | 1 | 590 | 1 | 583 | 0.0 | 1131 |
Msa1145450 | MtrunA17_Chr4g0013761 | 81.356 | 590 | 102 | 4 | 1 | 585 | 1 | 587 | 0.0 | 949 |
Msa1145450 | MtrunA17_Chr3g0078011 | 61.075 | 614 | 204 | 13 | 1 | 604 | 1 | 589 | 0.0 | 695 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1145450 | AT1G71360.1 | 42.308 | 598 | 310 | 9 | 23 | 605 | 19 | 596 | 7.47e-150 | 445 |
Msa1145450 | AT1G71360.2 | 43.216 | 597 | 306 | 10 | 23 | 605 | 45 | 622 | 3.01e-149 | 444 |
Msa1145450 | AT1G22882.1 | 45.234 | 577 | 242 | 11 | 75 | 605 | 112 | 660 | 1.77e-145 | 436 |
Msa1145450 | AT4G23950.1 | 41.809 | 409 | 215 | 6 | 196 | 602 | 170 | 557 | 4.78e-95 | 302 |
Msa1145450 | AT4G23950.2 | 41.707 | 410 | 215 | 7 | 196 | 602 | 170 | 558 | 1.89e-93 | 298 |
Find 140 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTCATTCTCTTCAGCTTA+TGG | 0.145583 | 7_4:+22282335 | Msa1145450:CDS |
TTTAGGTATCTTACCCATTT+TGG | 0.166001 | 7_4:-22283539 | None:intergenic |
GGCACCTTTCCCTTCTTTAT+TGG | 0.187268 | 7_4:-22283261 | None:intergenic |
AGACCTAAATTTAATTGTTT+TGG | 0.201241 | 7_4:+22283931 | Msa1145450:CDS |
CCGGGAGAAGCAGGTTTCTT+TGG | 0.240817 | 7_4:+22286219 | Msa1145450:CDS |
AACTACATGCTCCTCTTTAT+TGG | 0.244993 | 7_4:-22283018 | None:intergenic |
TTTCAGCTGGATTATCAAAT+TGG | 0.258814 | 7_4:+22282784 | Msa1145450:CDS |
GCTCCAAAACAATTAAATTT+AGG | 0.263875 | 7_4:-22283934 | None:intergenic |
TTGTTCTTAAAGAGCCAAAA+TGG | 0.265261 | 7_4:+22283525 | Msa1145450:CDS |
CTTCCTACTGCTGCCTGCTT+AGG | 0.266514 | 7_4:-22282117 | None:intergenic |
TTTGTGTGGGTAGCTCTTCC+TGG | 0.271181 | 7_4:+22286374 | Msa1145450:CDS |
GGCTTTGAAGATTCAACTTT+AGG | 0.274884 | 7_4:-22283556 | None:intergenic |
TTTATTGGAACCTAAAACTT+TGG | 0.279402 | 7_4:-22283246 | None:intergenic |
ATCCCTGCTTAAGATATTAG+AGG | 0.285746 | 7_4:-22283282 | None:intergenic |
TGCTTTGTTACGGCTATCTT+TGG | 0.291860 | 7_4:+22286291 | Msa1145450:CDS |
TTTGAAAATATTGACATATC+TGG | 0.300686 | 7_4:-22283978 | None:intergenic |
ACTCATTCTCTTCAGCTTAT+GGG | 0.310092 | 7_4:+22282336 | Msa1145450:CDS |
GATTTCAAAGTCTTTCAAAT+TGG | 0.322234 | 7_4:-22283420 | None:intergenic |
GTTACGGCTATCTTTGGATA+TGG | 0.325038 | 7_4:+22286297 | Msa1145450:CDS |
TATTGACATATCTGGAGTTT+AGG | 0.333964 | 7_4:-22283970 | None:intergenic |
CAACCAGTTGGCAGGATGCC+TGG | 0.353646 | 7_4:+22283866 | Msa1145450:CDS |
ATGCTGGTGATCTCAATTCT+TGG | 0.382007 | 7_4:+22284207 | Msa1145450:CDS |
TTCCTACTGCTGCCTGCTTA+GGG | 0.383916 | 7_4:-22282116 | None:intergenic |
TTTCATTGATTGCTTTGTTA+CGG | 0.388387 | 7_4:+22286281 | Msa1145450:CDS |
ACTGTTTGCCGTTTCATGAT+TGG | 0.392357 | 7_4:-22283813 | None:intergenic |
ACGTAAAGCTCGCATGGAAT+TGG | 0.396219 | 7_4:+22282219 | Msa1145450:CDS |
GAACTTTCCAACAGATGCTT+GGG | 0.398646 | 7_4:+22283454 | Msa1145450:CDS |
ACTTAGTGTGCAATAAAATT+CGG | 0.412768 | 7_4:-22283588 | None:intergenic |
TGGAAGTGTAATACATAGAT+TGG | 0.414499 | 7_4:+22283178 | Msa1145450:CDS |
TGAACTTTCCAACAGATGCT+TGG | 0.423228 | 7_4:+22283453 | Msa1145450:CDS |
ACTTTGGGCAGAGGAAGAAA+TGG | 0.424463 | 7_4:-22282269 | None:intergenic |
GGTGGAGGTGCTGAGGCTAT+TGG | 0.424475 | 7_4:+22282912 | Msa1145450:CDS |
GTCTCAAGTTTCTTTGCAGT+TGG | 0.424631 | 7_4:+22284232 | Msa1145450:CDS |
CAAGACAATCTATTTGCATC+TGG | 0.428687 | 7_4:+22283671 | Msa1145450:CDS |
GGTTGACGGATTTCTTCAAC+TGG | 0.428942 | 7_4:-22283848 | None:intergenic |
AACCAGTTGGCAGGATGCCT+GGG | 0.431096 | 7_4:+22283867 | Msa1145450:CDS |
CGGATTTCTTCAACTGGAGC+AGG | 0.434396 | 7_4:-22283842 | None:intergenic |
TTGAATCTTCAAAGCCACTA+TGG | 0.437657 | 7_4:+22283563 | Msa1145450:CDS |
GCTGAGGCTATTGGTTTAGT+TGG | 0.437987 | 7_4:+22282921 | Msa1145450:CDS |
CCAAAGAAACCTGCTTCTCC+CGG | 0.438181 | 7_4:-22286219 | None:intergenic |
TTGAAAGACTTTGAAATCCA+TGG | 0.438972 | 7_4:+22283425 | Msa1145450:CDS |
CTTTGGGCAGAGGAAGAAAT+GGG | 0.450705 | 7_4:-22282268 | None:intergenic |
GAAGCTTTATTATACTCTAA+AGG | 0.451944 | 7_4:+22282891 | Msa1145450:CDS |
CAATTATGCTTCGGCATCAA+AGG | 0.453952 | 7_4:+22283220 | Msa1145450:CDS |
GGTCCGAGGTTGAAAAGGTC+CGG | 0.457513 | 7_4:+22286200 | Msa1145450:intron |
TTGAGCATGCCTCACATTTG+AGG | 0.457552 | 7_4:-22283498 | None:intergenic |
GTTGACACTTGAGAGCTTTG+TGG | 0.462454 | 7_4:-22282064 | None:intergenic |
GTGCCTCTAATATCTTAAGC+AGG | 0.467275 | 7_4:+22283279 | Msa1145450:CDS |
GCCGTTTCATGATTGGAAGA+AGG | 0.469531 | 7_4:-22283806 | None:intergenic |
ACCTCAAAACAGCATTGTCC+TGG | 0.471683 | 7_4:-22284265 | None:intergenic |
TAATAAAGAACATACTGATT+CGG | 0.472142 | 7_4:+22282995 | Msa1145450:CDS |
TCCCCAGGCATCCTGCCAAC+TGG | 0.474677 | 7_4:-22283869 | None:intergenic |
TGAAAAGGTCCGGGAGAAGC+AGG | 0.475416 | 7_4:+22286210 | Msa1145450:CDS |
CCGTTTCATGATTGGAAGAA+GGG | 0.475600 | 7_4:-22283805 | None:intergenic |
ATCAGTTCTAAAGTTAAGTC+AGG | 0.481166 | 7_4:+22283143 | Msa1145450:CDS |
ACTCTCAGCAGGATCGGGAT+GGG | 0.483817 | 7_4:-22283726 | None:intergenic |
TTATCTCGGGCTGTGCCTCT+CGG | 0.487582 | 7_4:+22283095 | Msa1145450:CDS |
GGATCTGAAGAGCTTTCAGC+TGG | 0.490377 | 7_4:+22282771 | Msa1145450:CDS |
TGTTCACTCTCAGCAGGATC+GGG | 0.492452 | 7_4:-22283731 | None:intergenic |
TAAGAATCTCATTGACCAGC+AGG | 0.494809 | 7_4:+22284060 | Msa1145450:CDS |
AAGTCAGGCACTGATCAATC+TGG | 0.498645 | 7_4:+22283158 | Msa1145450:CDS |
CACTCTCAGCAGGATCGGGA+TGG | 0.499067 | 7_4:-22283727 | None:intergenic |
AAAATCTGATCTCTTATCTC+GGG | 0.500552 | 7_4:+22283082 | Msa1145450:CDS |
CCCTTCTTCCAATCATGAAA+CGG | 0.500904 | 7_4:+22283805 | Msa1145450:CDS |
TGTTCTTAAAGAGCCAAAAT+GGG | 0.502493 | 7_4:+22283526 | Msa1145450:CDS |
GTTCTTCAGAAGATTAAAGA+AGG | 0.507702 | 7_4:+22284034 | Msa1145450:CDS |
ATTCAGGTCCGAGGTTGAAA+AGG | 0.511149 | 7_4:+22286195 | Msa1145450:intron |
GCAGGTTTCTTTGGAAAACA+AGG | 0.518116 | 7_4:+22286228 | Msa1145450:CDS |
TTGATAGAACAGTTGACTCC+AGG | 0.519777 | 7_4:+22286347 | Msa1145450:CDS |
AGTGGTGTTTATGCGCTACT+TGG | 0.521605 | 7_4:+22282966 | Msa1145450:CDS |
AAATCCGTCAACCAGTTGGC+AGG | 0.521805 | 7_4:+22283858 | Msa1145450:CDS |
TACTGATTCGGCCAATAAAG+AGG | 0.522006 | 7_4:+22283007 | Msa1145450:CDS |
CTCTCAGCAGGATCGGGATG+GGG | 0.523175 | 7_4:-22283725 | None:intergenic |
TTGGAAAGTTCAGACTTCCA+TGG | 0.523368 | 7_4:-22283442 | None:intergenic |
TGCAGAATACAATTATGCTT+CGG | 0.524753 | 7_4:+22283211 | Msa1145450:CDS |
CTTGTCATTCATCCCTAAGC+AGG | 0.528045 | 7_4:+22282104 | Msa1145450:five_prime_UTR |
GCATCCTGCCAACTGGTTGA+CGG | 0.530318 | 7_4:-22283862 | None:intergenic |
GAAGAAGGGATATCTGAAGC+AGG | 0.532449 | 7_4:-22283791 | None:intergenic |
GTCTTGATGAGTTCAAGAGC+AGG | 0.532869 | 7_4:+22283117 | Msa1145450:CDS |
GCAGTAGGAAGATGAGGGAG+GGG | 0.532901 | 7_4:+22282129 | Msa1145450:five_prime_UTR |
TGAACATGTTCACTCTCAGC+AGG | 0.537283 | 7_4:-22283737 | None:intergenic |
CAGGCAGCAGTAGGAAGATG+AGG | 0.538403 | 7_4:+22282123 | Msa1145450:five_prime_UTR |
AGGAAAACCCAAGCATCTGT+TGG | 0.540357 | 7_4:-22283461 | None:intergenic |
ATGTTCACTCTCAGCAGGAT+CGG | 0.540435 | 7_4:-22283732 | None:intergenic |
TAATTGTATTCTGCACCTCC+AGG | 0.543624 | 7_4:-22283203 | None:intergenic |
GTCCGAGGTTGAAAAGGTCC+GGG | 0.545030 | 7_4:+22286201 | Msa1145450:CDS |
AATAAAATTCGGAACCATAG+TGG | 0.546010 | 7_4:-22283577 | None:intergenic |
AATTATGCTTCGGCATCAAA+GGG | 0.548259 | 7_4:+22283221 | Msa1145450:CDS |
GCAGTTGGATCATATACTCC+AGG | 0.548439 | 7_4:+22284247 | Msa1145450:CDS |
GGTGTTTATGCGCTACTTGG+TGG | 0.549516 | 7_4:+22282969 | Msa1145450:CDS |
TTATTATACTCTAAAGGTGG+AGG | 0.555825 | 7_4:+22282897 | Msa1145450:CDS |
CTCTAAAGGTGGAGGTGCTG+AGG | 0.557047 | 7_4:+22282905 | Msa1145450:CDS |
AATCTATTTGCATCTGGAGA+AGG | 0.558454 | 7_4:+22283677 | Msa1145450:CDS |
TCACTCACTGATAGAGAAAG+TGG | 0.559066 | 7_4:+22282948 | Msa1145450:CDS |
AGAACTTTCAGAAGAAACCT+TGG | 0.560587 | 7_4:+22283358 | Msa1145450:CDS |
GAGATCACGTAAAGCTCGCA+TGG | 0.568513 | 7_4:+22282213 | Msa1145450:CDS |
AAAATGGAAACTTTGGGCAG+AGG | 0.570292 | 7_4:-22282278 | None:intergenic |
CTCGTGCAGGCAAAATATGC+TGG | 0.571157 | 7_4:+22284191 | Msa1145450:intron |
CAAATGTGAGGCATGCTCAA+AGG | 0.572982 | 7_4:+22283501 | Msa1145450:CDS |
ATGGGGTTATGAAGAAGAGA+AGG | 0.573199 | 7_4:-22282250 | None:intergenic |
TTCTTAATAATTCAGGTCCG+AGG | 0.575561 | 7_4:+22286186 | Msa1145450:intron |
TTAAATTTAGGTCTAGAGTA+CGG | 0.576670 | 7_4:-22283922 | None:intergenic |
AGCTTATGGGTCACTCACAC+AGG | 0.578454 | 7_4:+22282349 | Msa1145450:CDS |
ACACTTGAGAGCTTTGTGGT+TGG | 0.578601 | 7_4:-22282060 | None:intergenic |
AGCAGTAGGAAGATGAGGGA+GGG | 0.579739 | 7_4:+22282128 | Msa1145450:five_prime_UTR |
AGGGATATCTGAAGCAGGGT+GGG | 0.581632 | 7_4:-22283786 | None:intergenic |
GGTTCCAATAAAGAAGGGAA+AGG | 0.581843 | 7_4:+22283257 | Msa1145450:CDS |
ATCCTCCAGCATCCTCTCAA+CGG | 0.584718 | 7_4:-22283636 | None:intergenic |
AATTTCTCCTCCACAGAACA+CGG | 0.585511 | 7_4:-22283326 | None:intergenic |
TGATAGAACAGTTGACTCCA+GGG | 0.585751 | 7_4:+22286348 | Msa1145450:CDS |
GTAATACATAGATTGGAGCC+TGG | 0.586563 | 7_4:+22283185 | Msa1145450:CDS |
GCTACCCACACAAAATTCCC+TGG | 0.586908 | 7_4:-22286365 | None:intergenic |
TACGCACTATAACATCCTGC+TGG | 0.589181 | 7_4:-22284075 | None:intergenic |
CAGGTTTCTTTGGAAAACAA+GGG | 0.589978 | 7_4:+22286229 | Msa1145450:CDS |
ATCTTGAGAACAGTATCCCC+AGG | 0.590052 | 7_4:-22283884 | None:intergenic |
ATCCCTAAGCAGGCAGCAGT+AGG | 0.595610 | 7_4:+22282114 | Msa1145450:five_prime_UTR |
CAGCAGTAGGAAGATGAGGG+AGG | 0.595774 | 7_4:+22282127 | Msa1145450:five_prime_UTR |
TGCCTCTAATATCTTAAGCA+GGG | 0.597312 | 7_4:+22283280 | Msa1145450:CDS |
GAGTATAATAAAGCTTCTGA+CGG | 0.598371 | 7_4:-22282885 | None:intergenic |
GCTTTATTATACTCTAAAGG+TGG | 0.599801 | 7_4:+22282894 | Msa1145450:CDS |
TTGAGGCAGTAAAATTCCCA+AGG | 0.599930 | 7_4:-22283481 | None:intergenic |
GGATGCCGTTGAGAGGATGC+TGG | 0.600025 | 7_4:+22283631 | Msa1145450:CDS |
TCTTCGAAATCCGTGTTCTG+TGG | 0.607278 | 7_4:+22283316 | Msa1145450:CDS |
CAGATATTTCACAAAATCCG+TGG | 0.609098 | 7_4:-22282818 | None:intergenic |
TTGGTGTGGATGCCGTTGAG+AGG | 0.612570 | 7_4:+22283624 | Msa1145450:CDS |
TCGAAATCCGTGTTCTGTGG+AGG | 0.612846 | 7_4:+22283319 | Msa1145450:CDS |
GAAGAAATCCGTCAACCAGT+TGG | 0.616669 | 7_4:+22283854 | Msa1145450:CDS |
AGGCAGCAGTAGGAAGATGA+GGG | 0.624964 | 7_4:+22282124 | Msa1145450:five_prime_UTR |
TCTTGATGAGTTCAAGAGCA+GGG | 0.640578 | 7_4:+22283118 | Msa1145450:CDS |
TATTTCTACAGTATCTACCA+AGG | 0.649127 | 7_4:-22283375 | None:intergenic |
ACCAGTTGGCAGGATGCCTG+GGG | 0.649182 | 7_4:+22283868 | Msa1145450:CDS |
AATTGGAATCAAGTTAACCA+CGG | 0.654455 | 7_4:+22282801 | Msa1145450:CDS |
AAGAAGGGATATCTGAAGCA+GGG | 0.657621 | 7_4:-22283790 | None:intergenic |
AAGGGATATCTGAAGCAGGG+TGG | 0.666617 | 7_4:-22283787 | None:intergenic |
ACTCAATAATAGAAGAAACC+AGG | 0.679333 | 7_4:-22286392 | None:intergenic |
ATTGTGCAGAAGTCGAGTCG+CGG | 0.701757 | 7_4:-22282176 | None:intergenic |
ATACATAGATTGGAGCCTGG+AGG | 0.724979 | 7_4:+22283188 | Msa1145450:CDS |
TGCCGTTGAGAGGATGCTGG+AGG | 0.725275 | 7_4:+22283634 | Msa1145450:CDS |
TTGAACTCATCAAGACCGAG+AGG | 0.728710 | 7_4:-22283110 | None:intergenic |
TTTGGGCAGAGGAAGAAATG+GGG | 0.747784 | 7_4:-22282267 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAATATAATAATGGAAA+TGG | - | chr7_4:22284603-22284622 | None:intergenic | 10.0% |
!! | TAAGGAATTAAATATAATAA+TGG | - | chr7_4:22284609-22284628 | None:intergenic | 10.0% |
!!! | ATTTTTTTTCTTAATAATTC+AGG | + | chr7_4:22286179-22286198 | Msa1145450:intron | 10.0% |
!!! | TTTATTATTTTGTATGTAGA+TGG | + | chr7_4:22282750-22282769 | Msa1145450:intron | 15.0% |
!!! | AAACCAAAATTTCAATTTTT+AGG | + | chr7_4:22285171-22285190 | Msa1145450:intron | 15.0% |
!!! | TTTTATTGAAATAATGAGAA+AGG | + | chr7_4:22285826-22285845 | Msa1145450:intron | 15.0% |
!!! | TTCTATTTCTTAATAAACTA+TGG | - | chr7_4:22286095-22286114 | None:intergenic | 15.0% |
!! | TTGATAAAAATGGAAACTTT+GGG | - | chr7_4:22282287-22282306 | None:intergenic | 20.0% |
!!! | TAATAAAGAACATACTGATT+CGG | + | chr7_4:22282995-22283014 | Msa1145450:CDS | 20.0% |
!!! | AGACCTAAATTTAATTGTTT+TGG | + | chr7_4:22283931-22283950 | Msa1145450:CDS | 20.0% |
!!! | TAAATTTAATTGTTTTGGAG+CGG | + | chr7_4:22283936-22283955 | Msa1145450:CDS | 20.0% |
!! | TTTGAAAATATTGACATATC+TGG | - | chr7_4:22283981-22284000 | None:intergenic | 20.0% |
!! | TACCTAGTGTAAATATTAAT+TGG | + | chr7_4:22284356-22284375 | Msa1145450:intron | 20.0% |
!! | ACATGTGAATAAACTATATT+GGG | - | chr7_4:22284396-22284415 | None:intergenic | 20.0% |
!! | TACATGTGAATAAACTATAT+TGG | - | chr7_4:22284397-22284416 | None:intergenic | 20.0% |
!! | TATTCACATGTATTAGAATA+AGG | + | chr7_4:22284405-22284424 | Msa1145450:intron | 20.0% |
!!! | CATCCTAAAAATTGAAATTT+TGG | - | chr7_4:22285177-22285196 | None:intergenic | 20.0% |
!!! | CAAAATTTCAATTTTTAGGA+TGG | + | chr7_4:22285175-22285194 | Msa1145450:intron | 20.0% |
!! | ATTGTAATTTCTGTAACTTA+TGG | - | chr7_4:22285239-22285258 | None:intergenic | 20.0% |
!! | TTAAAAATTGTGTGATTCAA+AGG | + | chr7_4:22285300-22285319 | Msa1145450:intron | 20.0% |
!! | ATCATAAATGATCTATCAAT+CGG | - | chr7_4:22285372-22285391 | None:intergenic | 20.0% |
!! | ATTGATAGATCATTTATGAT+TGG | + | chr7_4:22285372-22285391 | Msa1145450:intron | 20.0% |
!! | TTGATAGATCATTTATGATT+GGG | + | chr7_4:22285373-22285392 | Msa1145450:intron | 20.0% |
!! | TTGTAAATAGATATGTGTTA+GGG | - | chr7_4:22285713-22285732 | None:intergenic | 20.0% |
!! | TATTTCTTAATAAACTATGG+TGG | - | chr7_4:22286092-22286111 | None:intergenic | 20.0% |
!! | GTTGATAAAAATGGAAACTT+TGG | - | chr7_4:22282288-22282307 | None:intergenic | 25.0% |
! | AACAAATTAACCACTAACAT+CGG | - | chr7_4:22282445-22282464 | None:intergenic | 25.0% |
!! | CACAAAGTGTTATCAAATAA+AGG | + | chr7_4:22282546-22282565 | Msa1145450:intron | 25.0% |
! | TTATCAAATAAAGGCTATAG+TGG | + | chr7_4:22282555-22282574 | Msa1145450:intron | 25.0% |
! | AAAAATAATTGGATGACAGA+TGG | - | chr7_4:22282690-22282709 | None:intergenic | 25.0% |
! | TGCAACGAAGTAAAAATAAT+TGG | - | chr7_4:22282701-22282720 | None:intergenic | 25.0% |
!!! | GAAGCTTTATTATACTCTAA+AGG | + | chr7_4:22282891-22282910 | Msa1145450:CDS | 25.0% |
! | AAAAATCTGATCTCTTATCT+CGG | + | chr7_4:22283081-22283100 | Msa1145450:CDS | 25.0% |
! | TTTATTGGAACCTAAAACTT+TGG | - | chr7_4:22283249-22283268 | None:intergenic | 25.0% |
!!! | TTTTAGGTTCCAATAAAGAA+GGG | + | chr7_4:22283252-22283271 | Msa1145450:CDS | 25.0% |
! | GATTTCAAAGTCTTTCAAAT+TGG | - | chr7_4:22283423-22283442 | None:intergenic | 25.0% |
! | ACTTAGTGTGCAATAAAATT+CGG | - | chr7_4:22283591-22283610 | None:intergenic | 25.0% |
!! | TTAAATTTAGGTCTAGAGTA+CGG | - | chr7_4:22283925-22283944 | None:intergenic | 25.0% |
! | GCTCCAAAACAATTAAATTT+AGG | - | chr7_4:22283937-22283956 | None:intergenic | 25.0% |
! | ATTTCCAAAATGAATAGAGT+AGG | - | chr7_4:22284162-22284181 | None:intergenic | 25.0% |
! | ACATGTATTAGAATAAGGAT+GGG | + | chr7_4:22284410-22284429 | Msa1145450:intron | 25.0% |
! | AGTTTACTGATAGATGAATA+AGG | - | chr7_4:22284627-22284646 | None:intergenic | 25.0% |
! | ATTCATCTATCAGTAAACTT+CGG | + | chr7_4:22284628-22284647 | Msa1145450:intron | 25.0% |
! | AAACTATATAAGCACAACTT+AGG | - | chr7_4:22285049-22285068 | None:intergenic | 25.0% |
! | TAAGTTGTGCTTATATAGTT+TGG | + | chr7_4:22285048-22285067 | Msa1145450:intron | 25.0% |
! | AAGTTGTGCTTATATAGTTT+GGG | + | chr7_4:22285049-22285068 | Msa1145450:intron | 25.0% |
!!! | ACTTTACAAGTTGGTTTTAT+AGG | + | chr7_4:22285080-22285099 | Msa1145450:intron | 25.0% |
!! | TGGATCTTAAAATTTGAGTT+GGG | - | chr7_4:22285116-22285135 | None:intergenic | 25.0% |
!! | AAATTTCTGAAAGAAAGACA+AGG | + | chr7_4:22285398-22285417 | Msa1145450:intron | 25.0% |
! | GTTGTAAATAGATATGTGTT+AGG | - | chr7_4:22285714-22285733 | None:intergenic | 25.0% |
! | TTACTTTGTAGTCATTTGTT+AGG | + | chr7_4:22285772-22285791 | Msa1145450:intron | 25.0% |
!! | ACTCTTTTCAATTCAATTCT+GGG | - | chr7_4:22285800-22285819 | None:intergenic | 25.0% |
! | AATAAACCTCCTATTTATAC+AGG | + | chr7_4:22285956-22285975 | Msa1145450:intron | 25.0% |
! | TTGACATTATTTACTGTTTC+TGG | + | chr7_4:22286015-22286034 | Msa1145450:intron | 25.0% |
! | AATAAACTATGGTGGTAAAA+AGG | - | chr7_4:22286084-22286103 | None:intergenic | 25.0% |
! | CTACGAACTATATAGTTATT+TGG | + | chr7_4:22286149-22286168 | Msa1145450:intron | 25.0% |
!! | TTTCATTGATTGCTTTGTTA+CGG | + | chr7_4:22286281-22286300 | Msa1145450:CDS | 25.0% |
!! | GCAGAGAAAGTTGATAAAAA+TGG | - | chr7_4:22282297-22282316 | None:intergenic | 30.0% |
!!! | TTTCTCTGCTTTTTGATTTG+TGG | + | chr7_4:22282308-22282327 | Msa1145450:CDS | 30.0% |
!!! | TTCTCTGCTTTTTGATTTGT+GGG | + | chr7_4:22282309-22282328 | Msa1145450:CDS | 30.0% |
AGAAACAAAACAAGAAAGGA+TGG | - | chr7_4:22282392-22282411 | None:intergenic | 30.0% | |
GGAAAGAAACAAAACAAGAA+AGG | - | chr7_4:22282396-22282415 | None:intergenic | 30.0% | |
!! | GTTAGTGGTTAATTTGTTCT+CGG | + | chr7_4:22282447-22282466 | Msa1145450:intron | 30.0% |
!! | ATAGTCTTATACTTTGTGGT+TGG | + | chr7_4:22282595-22282614 | Msa1145450:intron | 30.0% |
!! | TAGTCTTATACTTTGTGGTT+GGG | + | chr7_4:22282596-22282615 | Msa1145450:intron | 30.0% |
GAGCAAGTATTTATAAGTGA+GGG | - | chr7_4:22282664-22282683 | None:intergenic | 30.0% | |
TGAGCAAGTATTTATAAGTG+AGG | - | chr7_4:22282665-22282684 | None:intergenic | 30.0% | |
CATACGTCTCATAATCTTAT+TGG | + | chr7_4:22282723-22282742 | Msa1145450:intron | 30.0% | |
TTTCAGCTGGATTATCAAAT+TGG | + | chr7_4:22282784-22282803 | Msa1145450:CDS | 30.0% | |
AATTGGAATCAAGTTAACCA+CGG | + | chr7_4:22282801-22282820 | Msa1145450:CDS | 30.0% | |
GAGTATAATAAAGCTTCTGA+CGG | - | chr7_4:22282888-22282907 | None:intergenic | 30.0% | |
! | GCTTTATTATACTCTAAAGG+TGG | + | chr7_4:22282894-22282913 | Msa1145450:CDS | 30.0% |
! | TTATTATACTCTAAAGGTGG+AGG | + | chr7_4:22282897-22282916 | Msa1145450:CDS | 30.0% |
AAAATCTGATCTCTTATCTC+GGG | + | chr7_4:22283082-22283101 | Msa1145450:CDS | 30.0% | |
!! | ATCAGTTCTAAAGTTAAGTC+AGG | + | chr7_4:22283143-22283162 | Msa1145450:CDS | 30.0% |
! | TGGAAGTGTAATACATAGAT+TGG | + | chr7_4:22283178-22283197 | Msa1145450:CDS | 30.0% |
TGCAGAATACAATTATGCTT+CGG | + | chr7_4:22283211-22283230 | Msa1145450:CDS | 30.0% | |
!!! | GTTTTAGGTTCCAATAAAGA+AGG | + | chr7_4:22283251-22283270 | Msa1145450:CDS | 30.0% |
! | TATTTCTACAGTATCTACCA+AGG | - | chr7_4:22283378-22283397 | None:intergenic | 30.0% |
!! | TTGAAAGACTTTGAAATCCA+TGG | + | chr7_4:22283425-22283444 | Msa1145450:CDS | 30.0% |
TTGTTCTTAAAGAGCCAAAA+TGG | + | chr7_4:22283525-22283544 | Msa1145450:CDS | 30.0% | |
TGTTCTTAAAGAGCCAAAAT+GGG | + | chr7_4:22283526-22283545 | Msa1145450:CDS | 30.0% | |
! | TTTAGGTATCTTACCCATTT+TGG | - | chr7_4:22283542-22283561 | None:intergenic | 30.0% |
AATAAAATTCGGAACCATAG+TGG | - | chr7_4:22283580-22283599 | None:intergenic | 30.0% | |
!! | CTAAGTGTTGTTGAAGTTTT+TGG | + | chr7_4:22283605-22283624 | Msa1145450:CDS | 30.0% |
! | TATTGACATATCTGGAGTTT+AGG | - | chr7_4:22283973-22283992 | None:intergenic | 30.0% |
GTTCTTCAGAAGATTAAAGA+AGG | + | chr7_4:22284034-22284053 | Msa1145450:CDS | 30.0% | |
! | TATAGTGCGTAATTTTGTCA+TGG | + | chr7_4:22284087-22284106 | Msa1145450:intron | 30.0% |
! | CTATCCTACTCTATTCATTT+TGG | + | chr7_4:22284155-22284174 | Msa1145450:intron | 30.0% |
GGCCAATTAATATTTACACT+AGG | - | chr7_4:22284361-22284380 | None:intergenic | 30.0% | |
CACATGTATTAGAATAAGGA+TGG | + | chr7_4:22284409-22284428 | Msa1145450:intron | 30.0% | |
TCAATAGAAGTTCACTTGTT+GGG | - | chr7_4:22284804-22284823 | None:intergenic | 30.0% | |
TTCAATAGAAGTTCACTTGT+TGG | - | chr7_4:22284805-22284824 | None:intergenic | 30.0% | |
AGTGAACTTCTATTGAAACA+TGG | + | chr7_4:22284808-22284827 | Msa1145450:intron | 30.0% | |
!!! | TTGGTTTTATAGGTTGAGTT+AGG | + | chr7_4:22285090-22285109 | Msa1145450:intron | 30.0% |
CTGGATCTTAAAATTTGAGT+TGG | - | chr7_4:22285117-22285136 | None:intergenic | 30.0% | |
TTATTTACGAACTGATGCAT+CGG | + | chr7_4:22285211-22285230 | Msa1145450:intron | 30.0% | |
TGAAAGAAAGACAAGGAAAA+AGG | + | chr7_4:22285405-22285424 | Msa1145450:intron | 30.0% | |
GAAAGAAAGACAAGGAAAAA+GGG | + | chr7_4:22285406-22285425 | Msa1145450:intron | 30.0% | |
AGAATCAGAAAAAACCCAAT+TGG | + | chr7_4:22285603-22285622 | Msa1145450:intron | 30.0% | |
TAATTTCCTAAACGACTCTT+AGG | + | chr7_4:22285680-22285699 | Msa1145450:intron | 30.0% | |
! | CACTCTTTTCAATTCAATTC+TGG | - | chr7_4:22285801-22285820 | None:intergenic | 30.0% |
GTAGGATATCCTGTATAAAT+AGG | - | chr7_4:22285968-22285987 | None:intergenic | 30.0% | |
TGTATGACGATAATACACTT+AGG | + | chr7_4:22285988-22286007 | Msa1145450:intron | 30.0% | |
ACTCAATAATAGAAGAAACC+AGG | - | chr7_4:22286395-22286414 | None:intergenic | 30.0% | |
TACTCATTCTCTTCAGCTTA+TGG | + | chr7_4:22282335-22282354 | Msa1145450:CDS | 35.0% | |
ACTCATTCTCTTCAGCTTAT+GGG | + | chr7_4:22282336-22282355 | Msa1145450:CDS | 35.0% | |
!!! | GTTTTGTTTCTTTCCATTCC+AGG | + | chr7_4:22282401-22282420 | Msa1145450:intron | 35.0% |
TTGTTGGTATCATAGCATAG+CGG | + | chr7_4:22282482-22282501 | Msa1145450:intron | 35.0% | |
!! | CAGCATAGTCTTATACTTTG+TGG | + | chr7_4:22282591-22282610 | Msa1145450:intron | 35.0% |
CAGATATTTCACAAAATCCG+TGG | - | chr7_4:22282821-22282840 | None:intergenic | 35.0% | |
AACTACATGCTCCTCTTTAT+TGG | - | chr7_4:22283021-22283040 | None:intergenic | 35.0% | |
AATTATGCTTCGGCATCAAA+GGG | + | chr7_4:22283221-22283240 | Msa1145450:CDS | 35.0% | |
TGCCTCTAATATCTTAAGCA+GGG | + | chr7_4:22283280-22283299 | Msa1145450:CDS | 35.0% | |
ATCCCTGCTTAAGATATTAG+AGG | - | chr7_4:22283285-22283304 | None:intergenic | 35.0% | |
AGAACTTTCAGAAGAAACCT+TGG | + | chr7_4:22283358-22283377 | Msa1145450:CDS | 35.0% | |
! | ATTTTACTGCCTCAAATGTG+AGG | + | chr7_4:22283489-22283508 | Msa1145450:CDS | 35.0% |
!! | GGCTTTGAAGATTCAACTTT+AGG | - | chr7_4:22283559-22283578 | None:intergenic | 35.0% |
TTGAATCTTCAAAGCCACTA+TGG | + | chr7_4:22283563-22283582 | Msa1145450:CDS | 35.0% | |
!!! | TGTTGTTGAAGTTTTTGGTG+TGG | + | chr7_4:22283610-22283629 | Msa1145450:CDS | 35.0% |
CAAGACAATCTATTTGCATC+TGG | + | chr7_4:22283671-22283690 | Msa1145450:CDS | 35.0% | |
AATCTATTTGCATCTGGAGA+AGG | + | chr7_4:22283677-22283696 | Msa1145450:CDS | 35.0% | |
! | TGTTCAGCAAAACACTTTTG+AGG | + | chr7_4:22283754-22283773 | Msa1145450:CDS | 35.0% |
! | GTTCAGCAAAACACTTTTGA+GGG | + | chr7_4:22283755-22283774 | Msa1145450:CDS | 35.0% |
! | TTCAGCAAAACACTTTTGAG+GGG | + | chr7_4:22283756-22283775 | Msa1145450:CDS | 35.0% |
!!! | AATTGTTTTGGAGCGGTATA+TGG | + | chr7_4:22283943-22283962 | Msa1145450:CDS | 35.0% |
ATTTCTGACCATATGAACTC+AGG | + | chr7_4:22284316-22284335 | Msa1145450:intron | 35.0% | |
TATTAATTGGCCCAATAGAC+AGG | + | chr7_4:22284369-22284388 | Msa1145450:intron | 35.0% | |
ATTAATTGGCCCAATAGACA+GGG | + | chr7_4:22284370-22284389 | Msa1145450:intron | 35.0% | |
GATGGGCATTTATTGCTAAT+CGG | + | chr7_4:22284427-22284446 | Msa1145450:intron | 35.0% | |
TGCTAATCGGTTGTTTATGT+TGG | + | chr7_4:22284440-22284459 | Msa1145450:intron | 35.0% | |
TTGTTTATGTTGGAGAGACT+AGG | + | chr7_4:22284450-22284469 | Msa1145450:intron | 35.0% | |
ACAGAGACAATTTCACAACA+GGG | - | chr7_4:22284541-22284560 | None:intergenic | 35.0% | |
AACAGAGACAATTTCACAAC+AGG | - | chr7_4:22284542-22284561 | None:intergenic | 35.0% | |
TGTTGTGAAATTGTCTCTGT+TGG | + | chr7_4:22284541-22284560 | Msa1145450:intron | 35.0% | |
GCACTATTATTGAACTTCTC+TGG | - | chr7_4:22284575-22284594 | None:intergenic | 35.0% | |
!!! | TTTTTTTGTCACTGACCAGT+CGG | - | chr7_4:22284729-22284748 | None:intergenic | 35.0% |
AAATAGTGAACTACTGACAG+TGG | + | chr7_4:22284747-22284766 | Msa1145450:intron | 35.0% | |
AATAGTGAACTACTGACAGT+GGG | + | chr7_4:22284748-22284767 | Msa1145450:intron | 35.0% | |
GATGTATTCAAACTTGACGT+TGG | + | chr7_4:22284892-22284911 | Msa1145450:intron | 35.0% | |
ATTTAGTCCTACATTGCCTA+AGG | + | chr7_4:22285023-22285042 | Msa1145450:intron | 35.0% | |
AGTACAATACACCAAATGGT+GGG | - | chr7_4:22285480-22285499 | None:intergenic | 35.0% | |
GTTGAGTACAATACACCAAA+TGG | - | chr7_4:22285484-22285503 | None:intergenic | 35.0% | |
TCTTGTGTAAAAACAGGGTA+AGG | - | chr7_4:22285506-22285525 | None:intergenic | 35.0% | |
!!! | TTACCCTGTTTTTACACAAG+AGG | + | chr7_4:22285505-22285524 | Msa1145450:intron | 35.0% |
TCTGATTCTTTCCTTAACCT+TGG | - | chr7_4:22285592-22285611 | None:intergenic | 35.0% | |
! | GAAAAGTGGATTCTTTCCTT+GGG | - | chr7_4:22285636-22285655 | None:intergenic | 35.0% |
! | TGAAAAGTGGATTCTTTCCT+TGG | - | chr7_4:22285637-22285656 | None:intergenic | 35.0% |
!! | GGAAAGAATCCACTTTTCAA+CGG | + | chr7_4:22285638-22285657 | Msa1145450:intron | 35.0% |
!! | GAAAGAATCCACTTTTCAAC+GGG | + | chr7_4:22285639-22285658 | Msa1145450:intron | 35.0% |
GAGGTTTATTGAGTTAGAGA+GGG | - | chr7_4:22285946-22285965 | None:intergenic | 35.0% | |
GGATATCCTGTATAAATAGG+AGG | - | chr7_4:22285965-22285984 | None:intergenic | 35.0% | |
GTGTATTATCGTCATACAGT+AGG | - | chr7_4:22285986-22286005 | None:intergenic | 35.0% | |
TTCTTAATAATTCAGGTCCG+AGG | + | chr7_4:22286186-22286205 | Msa1145450:intron | 35.0% | |
! | CAGGTTTCTTTGGAAAACAA+GGG | + | chr7_4:22286229-22286248 | Msa1145450:CDS | 35.0% |
ATGGGGTTATGAAGAAGAGA+AGG | - | chr7_4:22282253-22282272 | None:intergenic | 40.0% | |
AAAATGGAAACTTTGGGCAG+AGG | - | chr7_4:22282281-22282300 | None:intergenic | 40.0% | |
!! | GGTTAATTTGTTCTCGGATG+AGG | + | chr7_4:22282453-22282472 | Msa1145450:intron | 40.0% |
!! | TAATTTGTTCTCGGATGAGG+AGG | + | chr7_4:22282456-22282475 | Msa1145450:intron | 40.0% |
! | AATTTGTTCTCGGATGAGGA+GGG | + | chr7_4:22282457-22282476 | Msa1145450:intron | 40.0% |
TTAACTCAACCCCAACAAAC+CGG | + | chr7_4:22282620-22282639 | Msa1145450:intron | 40.0% | |
TCACTCACTGATAGAGAAAG+TGG | + | chr7_4:22282948-22282967 | Msa1145450:CDS | 40.0% | |
!! | TACTGATTCGGCCAATAAAG+AGG | + | chr7_4:22283007-22283026 | Msa1145450:CDS | 40.0% |
TCTTGATGAGTTCAAGAGCA+GGG | + | chr7_4:22283118-22283137 | Msa1145450:CDS | 40.0% | |
GTAATACATAGATTGGAGCC+TGG | + | chr7_4:22283185-22283204 | Msa1145450:CDS | 40.0% | |
TAATTGTATTCTGCACCTCC+AGG | - | chr7_4:22283206-22283225 | None:intergenic | 40.0% | |
CAATTATGCTTCGGCATCAA+AGG | + | chr7_4:22283220-22283239 | Msa1145450:CDS | 40.0% | |
! | TCAAAGGGAGCCAAAGTTTT+AGG | + | chr7_4:22283236-22283255 | Msa1145450:CDS | 40.0% |
GGTTCCAATAAAGAAGGGAA+AGG | + | chr7_4:22283257-22283276 | Msa1145450:CDS | 40.0% | |
GTGCCTCTAATATCTTAAGC+AGG | + | chr7_4:22283279-22283298 | Msa1145450:CDS | 40.0% | |
AATTTCTCCTCCACAGAACA+CGG | - | chr7_4:22283329-22283348 | None:intergenic | 40.0% | |
TTGGAAAGTTCAGACTTCCA+TGG | - | chr7_4:22283445-22283464 | None:intergenic | 40.0% | |
TGAACTTTCCAACAGATGCT+TGG | + | chr7_4:22283453-22283472 | Msa1145450:CDS | 40.0% | |
GAACTTTCCAACAGATGCTT+GGG | + | chr7_4:22283454-22283473 | Msa1145450:CDS | 40.0% | |
TTGAGGCAGTAAAATTCCCA+AGG | - | chr7_4:22283484-22283503 | None:intergenic | 40.0% | |
! | AAGAAGGGATATCTGAAGCA+GGG | - | chr7_4:22283793-22283812 | None:intergenic | 40.0% |
CCGTTTCATGATTGGAAGAA+GGG | - | chr7_4:22283808-22283827 | None:intergenic | 40.0% | |
CCCTTCTTCCAATCATGAAA+CGG | + | chr7_4:22283805-22283824 | Msa1145450:CDS | 40.0% | |
! | ACTGTTTGCCGTTTCATGAT+TGG | - | chr7_4:22283816-22283835 | None:intergenic | 40.0% |
TAAGAATCTCATTGACCAGC+AGG | + | chr7_4:22284060-22284079 | Msa1145450:CDS | 40.0% | |
ATGCTGGTGATCTCAATTCT+TGG | + | chr7_4:22284207-22284226 | Msa1145450:CDS | 40.0% | |
GTCTCAAGTTTCTTTGCAGT+TGG | + | chr7_4:22284232-22284251 | Msa1145450:CDS | 40.0% | |
AATGAGCTCCTGAGTTCATA+TGG | - | chr7_4:22284327-22284346 | None:intergenic | 40.0% | |
TATATTGGGCCCTGTCTATT+GGG | - | chr7_4:22284382-22284401 | None:intergenic | 40.0% | |
CAGAGACAATTTCACAACAG+GGG | - | chr7_4:22284540-22284559 | None:intergenic | 40.0% | |
CATCTATCAGTAAACTTCGG+AGG | + | chr7_4:22284631-22284650 | Msa1145450:intron | 40.0% | |
GAACTCCGATAGAAAGACTA+AGG | - | chr7_4:22284695-22284714 | None:intergenic | 40.0% | |
!!! | TTTTTTGTCACTGACCAGTC+GGG | - | chr7_4:22284728-22284747 | None:intergenic | 40.0% |
CAGAATAAACTAGCCAGATC+TGG | + | chr7_4:22284778-22284797 | Msa1145450:intron | 40.0% | |
ATAAGCACAACTTAGGCCTT+AGG | - | chr7_4:22285042-22285061 | None:intergenic | 40.0% | |
GCTGTACTCACTTTACAAGT+TGG | + | chr7_4:22285071-22285090 | Msa1145450:intron | 40.0% | |
CAGAAGCTCGTCATCAAAAT+CGG | - | chr7_4:22285146-22285165 | None:intergenic | 40.0% | |
TTCAAAGGCTCTGCTGATAT+TGG | + | chr7_4:22285315-22285334 | Msa1145450:intron | 40.0% | |
ATTGGTACTCCCTCGAAAAA+CGG | + | chr7_4:22285333-22285352 | Msa1145450:intron | 40.0% | |
GAGTACAATACACCAAATGG+TGG | - | chr7_4:22285481-22285500 | None:intergenic | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | - | chr7_4:22285511-22285530 | None:intergenic | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | - | chr7_4:22285512-22285531 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | - | chr7_4:22285556-22285575 | None:intergenic | 40.0% | |
! | ACTGTTTTCCCGTTGAAAAG+TGG | - | chr7_4:22285650-22285669 | None:intergenic | 40.0% |
AGTACACCTAAGAGTCGTTT+AGG | - | chr7_4:22285689-22285708 | None:intergenic | 40.0% | |
AGTTAGCTACTTAGCTGAAG+TGG | - | chr7_4:22285748-22285767 | None:intergenic | 40.0% | |
AGTAGTGACTCTTTGTGAAG+GGG | - | chr7_4:22285892-22285911 | None:intergenic | 40.0% | |
GAGTAGTGACTCTTTGTGAA+GGG | - | chr7_4:22285893-22285912 | None:intergenic | 40.0% | |
AGAGTAGTGACTCTTTGTGA+AGG | - | chr7_4:22285894-22285913 | None:intergenic | 40.0% | |
GGAGGTTTATTGAGTTAGAG+AGG | - | chr7_4:22285947-22285966 | None:intergenic | 40.0% | |
! | GGTCATTGCTCTAAGTTTAG+TGG | + | chr7_4:22286036-22286055 | Msa1145450:intron | 40.0% |
! | GCAGGTTTCTTTGGAAAACA+AGG | + | chr7_4:22286228-22286247 | Msa1145450:CDS | 40.0% |
! | TGCTTTGTTACGGCTATCTT+TGG | + | chr7_4:22286291-22286310 | Msa1145450:CDS | 40.0% |
GTTACGGCTATCTTTGGATA+TGG | + | chr7_4:22286297-22286316 | Msa1145450:CDS | 40.0% | |
! | TTGATAGAACAGTTGACTCC+AGG | + | chr7_4:22286347-22286366 | Msa1145450:CDS | 40.0% |
! | TGATAGAACAGTTGACTCCA+GGG | + | chr7_4:22286348-22286367 | Msa1145450:CDS | 40.0% |
! | ACACTTGAGAGCTTTGTGGT+TGG | - | chr7_4:22282063-22282082 | None:intergenic | 45.0% |
GTTGACACTTGAGAGCTTTG+TGG | - | chr7_4:22282067-22282086 | None:intergenic | 45.0% | |
CTTGTCATTCATCCCTAAGC+AGG | + | chr7_4:22282104-22282123 | Msa1145450:five_prime_UTR | 45.0% | |
ACGTAAAGCTCGCATGGAAT+TGG | + | chr7_4:22282219-22282238 | Msa1145450:CDS | 45.0% | |
TTTGGGCAGAGGAAGAAATG+GGG | - | chr7_4:22282270-22282289 | None:intergenic | 45.0% | |
CTTTGGGCAGAGGAAGAAAT+GGG | - | chr7_4:22282271-22282290 | None:intergenic | 45.0% | |
ACTTTGGGCAGAGGAAGAAA+TGG | - | chr7_4:22282272-22282291 | None:intergenic | 45.0% | |
GTTTCTTTCCATTCCAGGCA+TGG | + | chr7_4:22282406-22282425 | Msa1145450:intron | 45.0% | |
GACTTATAGGCCGATGTTAG+TGG | + | chr7_4:22282432-22282451 | Msa1145450:intron | 45.0% | |
!! | GCTGAGGCTATTGGTTTAGT+TGG | + | chr7_4:22282921-22282940 | Msa1145450:CDS | 45.0% |
AGTGGTGTTTATGCGCTACT+TGG | + | chr7_4:22282966-22282985 | Msa1145450:CDS | 45.0% | |
TTGAACTCATCAAGACCGAG+AGG | - | chr7_4:22283113-22283132 | None:intergenic | 45.0% | |
GTCTTGATGAGTTCAAGAGC+AGG | + | chr7_4:22283117-22283136 | Msa1145450:CDS | 45.0% | |
!! | AAGTCAGGCACTGATCAATC+TGG | + | chr7_4:22283158-22283177 | Msa1145450:CDS | 45.0% |
ATACATAGATTGGAGCCTGG+AGG | + | chr7_4:22283188-22283207 | Msa1145450:CDS | 45.0% | |
GGCACCTTTCCCTTCTTTAT+TGG | - | chr7_4:22283264-22283283 | None:intergenic | 45.0% | |
TCTTCGAAATCCGTGTTCTG+TGG | + | chr7_4:22283316-22283335 | Msa1145450:CDS | 45.0% | |
AGGAAAACCCAAGCATCTGT+TGG | - | chr7_4:22283464-22283483 | None:intergenic | 45.0% | |
! | ACAGATGCTTGGGTTTTCCT+TGG | + | chr7_4:22283464-22283483 | Msa1145450:CDS | 45.0% |
! | CAGATGCTTGGGTTTTCCTT+GGG | + | chr7_4:22283465-22283484 | Msa1145450:CDS | 45.0% |
TTGAGCATGCCTCACATTTG+AGG | - | chr7_4:22283501-22283520 | None:intergenic | 45.0% | |
CAAATGTGAGGCATGCTCAA+AGG | + | chr7_4:22283501-22283520 | Msa1145450:CDS | 45.0% | |
ATGTTCACTCTCAGCAGGAT+CGG | - | chr7_4:22283735-22283754 | None:intergenic | 45.0% | |
TGAACATGTTCACTCTCAGC+AGG | - | chr7_4:22283740-22283759 | None:intergenic | 45.0% | |
! | GAAGAAGGGATATCTGAAGC+AGG | - | chr7_4:22283794-22283813 | None:intergenic | 45.0% |
GCCGTTTCATGATTGGAAGA+AGG | - | chr7_4:22283809-22283828 | None:intergenic | 45.0% | |
!! | GGTTGACGGATTTCTTCAAC+TGG | - | chr7_4:22283851-22283870 | None:intergenic | 45.0% |
GAAGAAATCCGTCAACCAGT+TGG | + | chr7_4:22283854-22283873 | Msa1145450:CDS | 45.0% | |
ATCTTGAGAACAGTATCCCC+AGG | - | chr7_4:22283887-22283906 | None:intergenic | 45.0% | |
TACGCACTATAACATCCTGC+TGG | - | chr7_4:22284078-22284097 | None:intergenic | 45.0% | |
AAATGATTCGTTGCTCGTGC+AGG | + | chr7_4:22284178-22284197 | Msa1145450:intron | 45.0% | |
GCAGTTGGATCATATACTCC+AGG | + | chr7_4:22284247-22284266 | Msa1145450:CDS | 45.0% | |
!!! | TCCAGGACAATGCTGTTTTG+AGG | + | chr7_4:22284264-22284283 | Msa1145450:CDS | 45.0% |
ACCTCAAAACAGCATTGTCC+TGG | - | chr7_4:22284268-22284287 | None:intergenic | 45.0% | |
CTATATTGGGCCCTGTCTAT+TGG | - | chr7_4:22284383-22284402 | None:intergenic | 45.0% | |
AGAGACTAGGCTCGAATTAG+AGG | + | chr7_4:22284463-22284482 | Msa1145450:intron | 45.0% | |
CCGATAGAAAGACTAAGGCA+GGG | - | chr7_4:22284690-22284709 | None:intergenic | 45.0% | |
! | CCCTGCCTTAGTCTTTCTAT+CGG | + | chr7_4:22284687-22284706 | Msa1145450:intron | 45.0% |
TCCGATAGAAAGACTAAGGC+AGG | - | chr7_4:22284691-22284710 | None:intergenic | 45.0% | |
GGAGACTACAACTGCAACAA+AGG | - | chr7_4:22284973-22284992 | None:intergenic | 45.0% | |
! | AGTCTCCAGCACCATTGTTT+TGG | + | chr7_4:22284986-22285005 | Msa1145450:intron | 45.0% |
! | GTCTCCAGCACCATTGTTTT+GGG | + | chr7_4:22284987-22285006 | Msa1145450:intron | 45.0% |
!!! | CACCATTGTTTTGGGTGTGA+GGG | + | chr7_4:22284995-22285014 | Msa1145450:intron | 45.0% |
!!! | ACCATTGTTTTGGGTGTGAG+GGG | + | chr7_4:22284996-22285015 | Msa1145450:intron | 45.0% |
ACTTAGGCCTTAGGCAATGT+AGG | - | chr7_4:22285033-22285052 | None:intergenic | 45.0% | |
TCATCAAAATCGGCAGATGC+TGG | - | chr7_4:22285136-22285155 | None:intergenic | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7_4:22285516-22285535 | Msa1145450:intron | 45.0% |
CCTTGGGAGCAAAACCAATT+GGG | - | chr7_4:22285620-22285639 | None:intergenic | 45.0% | |
TCCTTGGGAGCAAAACCAAT+TGG | - | chr7_4:22285621-22285640 | None:intergenic | 45.0% | |
TGAGAGAAATCTCTCCTCCA+AGG | + | chr7_4:22285862-22285881 | Msa1145450:intron | 45.0% | |
GAGAGAAATCTCTCCTCCAA+GGG | + | chr7_4:22285863-22285882 | Msa1145450:intron | 45.0% | |
ATTCAGGTCCGAGGTTGAAA+AGG | + | chr7_4:22286195-22286214 | Msa1145450:intron | 45.0% | |
! | TGACTCCAGGGAATTTTGTG+TGG | + | chr7_4:22286360-22286379 | Msa1145450:CDS | 45.0% |
! | GACTCCAGGGAATTTTGTGT+GGG | + | chr7_4:22286361-22286380 | Msa1145450:CDS | 45.0% |
TTCCTACTGCTGCCTGCTTA+GGG | - | chr7_4:22282119-22282138 | None:intergenic | 50.0% | |
AGGCAGCAGTAGGAAGATGA+GGG | + | chr7_4:22282124-22282143 | Msa1145450:five_prime_UTR | 50.0% | |
AGCAGTAGGAAGATGAGGGA+GGG | + | chr7_4:22282128-22282147 | Msa1145450:five_prime_UTR | 50.0% | |
ATTGTGCAGAAGTCGAGTCG+CGG | - | chr7_4:22282179-22282198 | None:intergenic | 50.0% | |
GAGATCACGTAAAGCTCGCA+TGG | + | chr7_4:22282213-22282232 | Msa1145450:CDS | 50.0% | |
AGCTTATGGGTCACTCACAC+AGG | + | chr7_4:22282349-22282368 | Msa1145450:CDS | 50.0% | |
CTTTCCATTCCAGGCATGGT+AGG | + | chr7_4:22282410-22282429 | Msa1145450:intron | 50.0% | |
AAGTCCTACCATGCCTGGAA+TGG | - | chr7_4:22282417-22282436 | None:intergenic | 50.0% | |
CCTATAAGTCCTACCATGCC+TGG | - | chr7_4:22282422-22282441 | None:intergenic | 50.0% | |
CCAGGCATGGTAGGACTTAT+AGG | + | chr7_4:22282419-22282438 | Msa1145450:intron | 50.0% | |
TCGGATGAGGAGGGATTTGT+TGG | + | chr7_4:22282466-22282485 | Msa1145450:intron | 50.0% | |
GGATCTGAAGAGCTTTCAGC+TGG | + | chr7_4:22282771-22282790 | Msa1145450:CDS | 50.0% | |
GGTGTTTATGCGCTACTTGG+TGG | + | chr7_4:22282969-22282988 | Msa1145450:CDS | 50.0% | |
TCGAAATCCGTGTTCTGTGG+AGG | + | chr7_4:22283319-22283338 | Msa1145450:CDS | 50.0% | |
ATCCTCCAGCATCCTCTCAA+CGG | - | chr7_4:22283639-22283658 | None:intergenic | 50.0% | |
TGTTCACTCTCAGCAGGATC+GGG | - | chr7_4:22283734-22283753 | None:intergenic | 50.0% | |
! | AGGGATATCTGAAGCAGGGT+GGG | - | chr7_4:22283789-22283808 | None:intergenic | 50.0% |
! | AAGGGATATCTGAAGCAGGG+TGG | - | chr7_4:22283790-22283809 | None:intergenic | 50.0% |
CGGATTTCTTCAACTGGAGC+AGG | - | chr7_4:22283845-22283864 | None:intergenic | 50.0% | |
AAATCCGTCAACCAGTTGGC+AGG | + | chr7_4:22283858-22283877 | Msa1145450:CDS | 50.0% | |
CTCGTGCAGGCAAAATATGC+TGG | + | chr7_4:22284191-22284210 | Msa1145450:intron | 50.0% | |
GTTCTATGCTAAGACCCGAC+TGG | + | chr7_4:22284711-22284730 | Msa1145450:intron | 50.0% | |
! | TTCACTTGTTGGGCCAGATC+TGG | - | chr7_4:22284794-22284813 | None:intergenic | 50.0% |
CACACCCAAAACAATGGTGC+TGG | - | chr7_4:22284994-22285013 | None:intergenic | 50.0% | |
!!! | GCACCATTGTTTTGGGTGTG+AGG | + | chr7_4:22284994-22285013 | Msa1145450:intron | 50.0% |
TCCCCTCACACCCAAAACAA+TGG | - | chr7_4:22285000-22285019 | None:intergenic | 50.0% | |
GTACTCCCTCGAAAAACGGA+GGG | + | chr7_4:22285337-22285356 | Msa1145450:intron | 50.0% | |
!! | TCCAACCCTCCGTTTTTCGA+GGG | - | chr7_4:22285345-22285364 | None:intergenic | 50.0% |
TCGAAAAACGGAGGGTTGGA+CGG | + | chr7_4:22285345-22285364 | Msa1145450:intron | 50.0% | |
GACAAGGAAAAAGGGCAACC+TGG | + | chr7_4:22285414-22285433 | Msa1145450:intron | 50.0% | |
AAGGTCACGAGTTCAAGTCC+TGG | - | chr7_4:22285537-22285556 | None:intergenic | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | + | chr7_4:22285572-22285591 | Msa1145450:intron | 50.0% | |
TACCAGTTGCGCCAAGGTTA+AGG | + | chr7_4:22285578-22285597 | Msa1145450:intron | 50.0% | |
TTCCTTAACCTTGGCGCAAC+TGG | - | chr7_4:22285583-22285602 | None:intergenic | 50.0% | |
!!! | CCCAATTGGTTTTGCTCCCA+AGG | + | chr7_4:22285617-22285636 | Msa1145450:intron | 50.0% |
CTTTGTGAAGGGGAAACCCT+TGG | - | chr7_4:22285882-22285901 | None:intergenic | 50.0% | |
CCAAAGAAACCTGCTTCTCC+CGG | - | chr7_4:22286222-22286241 | None:intergenic | 50.0% | |
GCTACCCACACAAAATTCCC+TGG | - | chr7_4:22286368-22286387 | None:intergenic | 50.0% | |
TTTGTGTGGGTAGCTCTTCC+TGG | + | chr7_4:22286374-22286393 | Msa1145450:CDS | 50.0% | |
ATCCCTAAGCAGGCAGCAGT+AGG | + | chr7_4:22282114-22282133 | Msa1145450:five_prime_UTR | 55.0% | |
CTTCCTACTGCTGCCTGCTT+AGG | - | chr7_4:22282120-22282139 | None:intergenic | 55.0% | |
CAGGCAGCAGTAGGAAGATG+AGG | + | chr7_4:22282123-22282142 | Msa1145450:five_prime_UTR | 55.0% | |
CAGCAGTAGGAAGATGAGGG+AGG | + | chr7_4:22282127-22282146 | Msa1145450:five_prime_UTR | 55.0% | |
GCAGTAGGAAGATGAGGGAG+GGG | + | chr7_4:22282129-22282148 | Msa1145450:five_prime_UTR | 55.0% | |
!! | CCTCACAAGCCGGTTTGTTG+GGG | - | chr7_4:22282632-22282651 | None:intergenic | 55.0% |
!! | GCCTCACAAGCCGGTTTGTT+GGG | - | chr7_4:22282633-22282652 | None:intergenic | 55.0% |
GCAATCTTCGCCTCACAAGC+CGG | - | chr7_4:22282642-22282661 | None:intergenic | 55.0% | |
!! | CTCTAAAGGTGGAGGTGCTG+AGG | + | chr7_4:22282905-22282924 | Msa1145450:CDS | 55.0% |
TTATCTCGGGCTGTGCCTCT+CGG | + | chr7_4:22283095-22283114 | Msa1145450:CDS | 55.0% | |
TTGGTGTGGATGCCGTTGAG+AGG | + | chr7_4:22283624-22283643 | Msa1145450:CDS | 55.0% | |
ACTCTCAGCAGGATCGGGAT+GGG | - | chr7_4:22283729-22283748 | None:intergenic | 55.0% | |
GCATCCTGCCAACTGGTTGA+CGG | - | chr7_4:22283865-22283884 | None:intergenic | 55.0% | |
AACCAGTTGGCAGGATGCCT+GGG | + | chr7_4:22283867-22283886 | Msa1145450:CDS | 55.0% | |
AGAGGGGACTGCAATTCAGG+CGG | - | chr7_4:22284923-22284942 | None:intergenic | 55.0% | |
GCTAGAGGGGACTGCAATTC+AGG | - | chr7_4:22284926-22284945 | None:intergenic | 55.0% | |
AGCCACCTAAGTGCGGCATT+TGG | + | chr7_4:22284943-22284962 | Msa1145450:intron | 55.0% | |
GCCACCTAAGTGCGGCATTT+GGG | + | chr7_4:22284944-22284963 | Msa1145450:intron | 55.0% | |
ACCCAAATGCCGCACTTAGG+TGG | - | chr7_4:22284948-22284967 | None:intergenic | 55.0% | |
GCAACCCAAATGCCGCACTT+AGG | - | chr7_4:22284951-22284970 | None:intergenic | 55.0% | |
GGTACTCCCTCGAAAAACGG+AGG | + | chr7_4:22285336-22285355 | Msa1145450:intron | 55.0% | |
TCCCTCGAAAAACGGAGGGT+TGG | + | chr7_4:22285341-22285360 | Msa1145450:intron | 55.0% | |
!! | GTCCAACCCTCCGTTTTTCG+AGG | - | chr7_4:22285346-22285365 | None:intergenic | 55.0% |
TGTGAAGGGGAAACCCTTGG+AGG | - | chr7_4:22285879-22285898 | None:intergenic | 55.0% | |
GGTCCGAGGTTGAAAAGGTC+CGG | + | chr7_4:22286200-22286219 | Msa1145450:intron | 55.0% | |
GTCCGAGGTTGAAAAGGTCC+GGG | + | chr7_4:22286201-22286220 | Msa1145450:CDS | 55.0% | |
! | CTCCCGGACCTTTTCAACCT+CGG | - | chr7_4:22286206-22286225 | None:intergenic | 55.0% |
TGAAAAGGTCCGGGAGAAGC+AGG | + | chr7_4:22286210-22286229 | Msa1145450:CDS | 55.0% | |
CCGGGAGAAGCAGGTTTCTT+TGG | + | chr7_4:22286219-22286238 | Msa1145450:CDS | 55.0% | |
!! | CCCCAACAAACCGGCTTGTG+AGG | + | chr7_4:22282629-22282648 | Msa1145450:intron | 60.0% |
!! | CGCCTCACAAGCCGGTTTGT+TGG | - | chr7_4:22282634-22282653 | None:intergenic | 60.0% |
!! | GGTGGAGGTGCTGAGGCTAT+TGG | + | chr7_4:22282912-22282931 | Msa1145450:CDS | 60.0% |
GGATGCCGTTGAGAGGATGC+TGG | + | chr7_4:22283631-22283650 | Msa1145450:CDS | 60.0% | |
TGCCGTTGAGAGGATGCTGG+AGG | + | chr7_4:22283634-22283653 | Msa1145450:CDS | 60.0% | |
CTCTCAGCAGGATCGGGATG+GGG | - | chr7_4:22283728-22283747 | None:intergenic | 60.0% | |
CACTCTCAGCAGGATCGGGA+TGG | - | chr7_4:22283730-22283749 | None:intergenic | 60.0% | |
CAACCAGTTGGCAGGATGCC+TGG | + | chr7_4:22283866-22283885 | Msa1145450:CDS | 60.0% | |
ACCAGTTGGCAGGATGCCTG+GGG | + | chr7_4:22283868-22283887 | Msa1145450:CDS | 60.0% | |
CCGCACTTAGGTGGCTAGAG+GGG | - | chr7_4:22284939-22284958 | None:intergenic | 60.0% | |
CCCCTCTAGCCACCTAAGTG+CGG | + | chr7_4:22284936-22284955 | Msa1145450:intron | 60.0% | |
GCCGCACTTAGGTGGCTAGA+GGG | - | chr7_4:22284940-22284959 | None:intergenic | 60.0% | |
TGCCGCACTTAGGTGGCTAG+AGG | - | chr7_4:22284941-22284960 | None:intergenic | 60.0% | |
ACTGAAGCTCCCGCATACGC+AGG | + | chr7_4:22285440-22285459 | Msa1145450:intron | 60.0% | |
CTGAAGCTCCCGCATACGCA+GGG | + | chr7_4:22285441-22285460 | Msa1145450:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_4:22285468-22285487 | None:intergenic | 60.0% |
TCCCCAGGCATCCTGCCAAC+TGG | - | chr7_4:22283872-22283891 | None:intergenic | 65.0% | |
TGCGGGAGCTTCAGTGCACC+AGG | - | chr7_4:22285435-22285454 | None:intergenic | 65.0% | |
TTCCCGGACCCTGCGTATGC+GGG | - | chr7_4:22285452-22285471 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | - | chr7_4:22285453-22285472 | None:intergenic | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | + | chr7_4:22285452-22285471 | Msa1145450:intron | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | + | chr7_4:22285453-22285472 | Msa1145450:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr7_4:22285466-22285485 | Msa1145450:intron | 65.0% | |
GCTCCCGCATACGCAGGGTC+CGG | + | chr7_4:22285446-22285465 | Msa1145450:intron | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | + | chr7_4:22285447-22285466 | Msa1145450:intron | 70.0% | |
CGCATACGCAGGGTCCGGGA+AGG | + | chr7_4:22285451-22285470 | Msa1145450:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 22282046 | 22286455 | 22282046 | ID=Msa1145450;Name=Msa1145450 |
chr7_4 | mRNA | 22282046 | 22286455 | 22282046 | ID=Msa1145450-mRNA-1;Parent=Msa1145450;Name=Msa1145450-mRNA-1;_AED=0.05;_eAED=0.05;_QI=162|1|1|1|1|1|4|8|605 |
chr7_4 | exon | 22282046 | 22282370 | 22282046 | ID=Msa1145450-mRNA-1:exon:5495;Parent=Msa1145450-mRNA-1 |
chr7_4 | exon | 22282769 | 22284090 | 22282769 | ID=Msa1145450-mRNA-1:exon:5496;Parent=Msa1145450-mRNA-1 |
chr7_4 | exon | 22284200 | 22284285 | 22284200 | ID=Msa1145450-mRNA-1:exon:5497;Parent=Msa1145450-mRNA-1 |
chr7_4 | exon | 22286201 | 22286455 | 22286201 | ID=Msa1145450-mRNA-1:exon:5498;Parent=Msa1145450-mRNA-1 |
chr7_4 | five_prime_UTR | 22282046 | 22282207 | 22282046 | ID=Msa1145450-mRNA-1:five_prime_utr;Parent=Msa1145450-mRNA-1 |
chr7_4 | CDS | 22282208 | 22282370 | 22282208 | ID=Msa1145450-mRNA-1:cds;Parent=Msa1145450-mRNA-1 |
chr7_4 | CDS | 22282769 | 22284090 | 22282769 | ID=Msa1145450-mRNA-1:cds;Parent=Msa1145450-mRNA-1 |
chr7_4 | CDS | 22284200 | 22284285 | 22284200 | ID=Msa1145450-mRNA-1:cds;Parent=Msa1145450-mRNA-1 |
chr7_4 | CDS | 22286201 | 22286447 | 22286201 | ID=Msa1145450-mRNA-1:cds;Parent=Msa1145450-mRNA-1 |
chr7_4 | three_prime_UTR | 22286448 | 22286455 | 22286448 | ID=Msa1145450-mRNA-1:three_prime_utr;Parent=Msa1145450-mRNA-1 |
Gene Sequence |
Protein sequence |