Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152930 | XP_003623331.2 | 92.045 | 352 | 18 | 3 | 1 | 344 | 3 | 352 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152930 | sp|Q700D9|MYBF_ARATH | 65.672 | 67 | 19 | 1 | 57 | 119 | 15 | 81 | 1.24e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152930 | G7KSC8 | 92.045 | 352 | 18 | 3 | 1 | 344 | 3 | 352 | 0.0 | 628 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1152930 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1025070 | Msa1152930 | 0.807851 | 4.131069e-50 | -8.615850e-47 |
| Msa1109080 | Msa1152930 | 0.870646 | 1.247221e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152930 | MtrunA17_Chr7g0243081 | 92.045 | 352 | 18 | 3 | 1 | 344 | 3 | 352 | 0.0 | 628 |
| Msa1152930 | MtrunA17_Chr8g0379121 | 54.622 | 119 | 43 | 3 | 19 | 126 | 58 | 176 | 3.82e-32 | 124 |
| Msa1152930 | MtrunA17_Chr2g0320231 | 58.621 | 116 | 40 | 3 | 16 | 126 | 50 | 162 | 3.99e-32 | 123 |
| Msa1152930 | MtrunA17_Chr2g0283951 | 65.116 | 86 | 22 | 2 | 48 | 125 | 72 | 157 | 1.12e-27 | 111 |
| Msa1152930 | MtrunA17_Chr2g0288601 | 72.464 | 69 | 15 | 1 | 48 | 112 | 54 | 122 | 1.34e-27 | 105 |
| Msa1152930 | MtrunA17_Chr1g0210911 | 71.212 | 66 | 15 | 1 | 56 | 117 | 13 | 78 | 3.29e-25 | 103 |
| Msa1152930 | MtrunA17_Chr1g0162931 | 63.889 | 72 | 22 | 1 | 50 | 117 | 3 | 74 | 1.30e-24 | 101 |
| Msa1152930 | MtrunA17_Chr6g0479431 | 51.765 | 85 | 30 | 2 | 64 | 144 | 201 | 278 | 7.50e-19 | 86.7 |
| Msa1152930 | MtrunA17_Chr3g0095611 | 41.228 | 114 | 53 | 4 | 47 | 156 | 1 | 104 | 2.70e-18 | 82.4 |
| Msa1152930 | MtrunA17_Chr8g0366281 | 41.441 | 111 | 57 | 2 | 33 | 135 | 137 | 247 | 3.90e-18 | 84.3 |
| Msa1152930 | MtrunA17_Chr1g0154261 | 55.263 | 76 | 28 | 2 | 64 | 135 | 125 | 198 | 5.02e-18 | 83.2 |
| Msa1152930 | MtrunA17_Chr5g0410741 | 52.439 | 82 | 34 | 2 | 59 | 135 | 212 | 293 | 8.85e-18 | 83.6 |
| Msa1152930 | MtrunA17_Chr3g0109981 | 59.701 | 67 | 22 | 2 | 59 | 120 | 267 | 333 | 3.91e-17 | 82.0 |
| Msa1152930 | MtrunA17_Chr6g0461641 | 64.151 | 53 | 15 | 1 | 66 | 114 | 43 | 95 | 1.86e-15 | 76.6 |
| Msa1152930 | MtrunA17_Chr2g0321461 | 60.714 | 56 | 18 | 1 | 66 | 117 | 46 | 101 | 2.45e-15 | 76.3 |
| Msa1152930 | MtrunA17_Chr5g0409731 | 60.345 | 58 | 19 | 1 | 61 | 114 | 21 | 78 | 2.73e-15 | 75.5 |
| Msa1152930 | MtrunA17_Chr7g0261911 | 58.929 | 56 | 19 | 1 | 66 | 117 | 263 | 318 | 5.31e-15 | 75.9 |
| Msa1152930 | MtrunA17_Chr1g0190301 | 58.929 | 56 | 19 | 1 | 66 | 117 | 176 | 231 | 6.77e-15 | 75.1 |
| Msa1152930 | MtrunA17_Chr7g0274471 | 58.929 | 56 | 19 | 1 | 66 | 117 | 219 | 274 | 7.98e-15 | 75.1 |
| Msa1152930 | MtrunA17_Chr7g0258551 | 46.835 | 79 | 37 | 2 | 61 | 134 | 208 | 286 | 1.25e-14 | 74.3 |
| Msa1152930 | MtrunA17_Chr7g0254981 | 52.239 | 67 | 28 | 1 | 57 | 119 | 42 | 108 | 3.31e-14 | 72.0 |
| Msa1152930 | MtrunA17_Chr1g0197171 | 58.929 | 56 | 19 | 1 | 66 | 117 | 45 | 100 | 3.74e-14 | 72.0 |
| Msa1152930 | MtrunA17_Chr2g0290991 | 58.929 | 56 | 19 | 1 | 66 | 117 | 40 | 95 | 4.29e-14 | 72.0 |
| Msa1152930 | MtrunA17_Chr5g0417521 | 54.717 | 53 | 20 | 1 | 66 | 114 | 16 | 68 | 1.73e-13 | 70.5 |
| Msa1152930 | MtrunA17_Chr2g0291021 | 57.895 | 57 | 20 | 1 | 67 | 119 | 51 | 107 | 5.30e-13 | 68.9 |
| Msa1152930 | MtrunA17_Chr1g0175091 | 49.315 | 73 | 32 | 2 | 67 | 134 | 260 | 332 | 6.80e-13 | 69.3 |
| Msa1152930 | MtrunA17_Chr8g0356501 | 53.571 | 56 | 22 | 1 | 66 | 117 | 38 | 93 | 1.44e-12 | 67.8 |
| Msa1152930 | MtrunA17_Chr4g0009901 | 52.727 | 55 | 23 | 1 | 63 | 114 | 166 | 220 | 2.60e-12 | 66.2 |
| Msa1152930 | MtrunA17_Chr2g0310011 | 53.571 | 56 | 22 | 1 | 66 | 117 | 36 | 91 | 2.82e-12 | 67.0 |
| Msa1152930 | MtrunA17_Chr1g0175081 | 52.727 | 55 | 22 | 1 | 67 | 117 | 24 | 78 | 3.27e-12 | 62.4 |
| Msa1152930 | MtrunA17_Chr4g0031961 | 49.333 | 75 | 34 | 2 | 44 | 114 | 109 | 183 | 3.80e-12 | 66.2 |
| Msa1152930 | MtrunA17_Chr4g0042451 | 51.786 | 56 | 23 | 1 | 66 | 117 | 18 | 73 | 1.17e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152930 | AT2G38300.1 | 40.491 | 326 | 154 | 15 | 42 | 344 | 32 | 340 | 2.04e-51 | 174 |
| Msa1152930 | AT2G40260.1 | 62.037 | 108 | 35 | 2 | 48 | 151 | 65 | 170 | 2.33e-35 | 133 |
| Msa1152930 | AT2G42660.1 | 75.758 | 66 | 12 | 1 | 57 | 118 | 42 | 107 | 1.63e-27 | 108 |
| Msa1152930 | AT2G02060.2 | 61.728 | 81 | 27 | 1 | 38 | 114 | 2 | 82 | 5.56e-25 | 102 |
| Msa1152930 | AT2G02060.1 | 61.728 | 81 | 27 | 1 | 38 | 114 | 2 | 82 | 5.56e-25 | 102 |
| Msa1152930 | AT4G04605.1 | 56.977 | 86 | 31 | 2 | 53 | 132 | 2 | 87 | 1.02e-24 | 100 |
| Msa1152930 | AT1G14600.1 | 65.672 | 67 | 19 | 1 | 57 | 119 | 15 | 81 | 1.26e-24 | 101 |
| Msa1152930 | AT4G04580.1 | 55.224 | 67 | 26 | 1 | 55 | 117 | 4 | 70 | 1.18e-19 | 85.1 |
| Msa1152930 | AT5G42630.1 | 62.295 | 61 | 19 | 1 | 64 | 120 | 104 | 164 | 7.06e-18 | 82.8 |
| Msa1152930 | AT5G42630.2 | 62.295 | 61 | 19 | 1 | 64 | 120 | 104 | 164 | 7.58e-18 | 81.6 |
| Msa1152930 | AT4G04555.1 | 56.923 | 65 | 24 | 1 | 57 | 117 | 6 | 70 | 1.63e-17 | 77.4 |
| Msa1152930 | AT1G32240.1 | 51.220 | 82 | 35 | 2 | 59 | 135 | 206 | 287 | 2.11e-17 | 82.8 |
| Msa1152930 | AT1G32240.2 | 51.220 | 82 | 35 | 2 | 59 | 135 | 206 | 287 | 2.66e-17 | 82.4 |
| Msa1152930 | AT5G16560.1 | 54.054 | 74 | 29 | 2 | 59 | 127 | 212 | 285 | 1.10e-16 | 80.9 |
| Msa1152930 | AT4G17695.1 | 57.377 | 61 | 22 | 1 | 64 | 120 | 163 | 223 | 9.13e-16 | 77.4 |
| Msa1152930 | AT5G45580.1 | 60.345 | 58 | 19 | 1 | 61 | 114 | 3 | 60 | 2.49e-15 | 75.5 |
| Msa1152930 | AT5G45580.2 | 60.345 | 58 | 19 | 1 | 61 | 114 | 19 | 76 | 2.91e-15 | 75.5 |
| Msa1152930 | AT3G04030.1 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 1.68e-14 | 74.3 |
| Msa1152930 | AT3G04030.3 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 1.91e-14 | 74.3 |
| Msa1152930 | AT5G18240.2 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 2.64e-14 | 73.9 |
| Msa1152930 | AT5G18240.3 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 2.64e-14 | 73.9 |
| Msa1152930 | AT5G18240.5 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 2.86e-14 | 73.6 |
| Msa1152930 | AT5G18240.1 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 2.91e-14 | 73.6 |
| Msa1152930 | AT5G18240.4 | 57.143 | 56 | 20 | 1 | 66 | 117 | 46 | 101 | 2.91e-14 | 73.6 |
| Msa1152930 | AT3G04030.2 | 56.364 | 55 | 21 | 1 | 66 | 117 | 46 | 100 | 4.28e-14 | 73.2 |
| Msa1152930 | AT5G59570.2 | 45.977 | 87 | 41 | 3 | 33 | 114 | 108 | 193 | 1.62e-13 | 70.5 |
| Msa1152930 | AT5G59570.1 | 45.977 | 87 | 41 | 3 | 33 | 114 | 108 | 193 | 1.62e-13 | 70.5 |
| Msa1152930 | AT3G04450.4 | 45.333 | 75 | 29 | 2 | 55 | 117 | 180 | 254 | 2.48e-13 | 70.9 |
| Msa1152930 | AT3G04450.2 | 45.333 | 75 | 29 | 2 | 55 | 117 | 180 | 254 | 2.48e-13 | 70.9 |
| Msa1152930 | AT3G04450.1 | 45.333 | 75 | 29 | 2 | 55 | 117 | 220 | 294 | 2.62e-13 | 70.9 |
| Msa1152930 | AT3G04450.3 | 45.333 | 75 | 29 | 2 | 55 | 117 | 220 | 294 | 3.16e-13 | 70.1 |
| Msa1152930 | AT4G28610.1 | 56.364 | 55 | 20 | 1 | 67 | 117 | 227 | 281 | 3.26e-13 | 70.5 |
| Msa1152930 | AT5G29000.1 | 58.182 | 55 | 19 | 1 | 67 | 117 | 190 | 244 | 3.26e-13 | 70.5 |
| Msa1152930 | AT5G29000.3 | 58.182 | 55 | 19 | 1 | 67 | 117 | 190 | 244 | 3.26e-13 | 70.5 |
| Msa1152930 | AT2G01060.1 | 57.895 | 57 | 20 | 1 | 67 | 119 | 17 | 73 | 3.38e-13 | 69.7 |
| Msa1152930 | AT5G29000.2 | 58.182 | 55 | 19 | 1 | 67 | 117 | 233 | 287 | 4.22e-13 | 70.1 |
| Msa1152930 | AT2G20400.1 | 56.140 | 57 | 21 | 1 | 67 | 119 | 233 | 289 | 4.98e-13 | 70.1 |
| Msa1152930 | AT2G20400.2 | 56.140 | 57 | 21 | 1 | 67 | 119 | 233 | 289 | 5.00e-13 | 70.1 |
| Msa1152930 | AT5G29000.4 | 58.182 | 55 | 19 | 1 | 67 | 117 | 233 | 287 | 5.19e-13 | 69.3 |
| Msa1152930 | AT4G13640.1 | 54.717 | 53 | 20 | 1 | 66 | 114 | 38 | 90 | 5.52e-13 | 68.9 |
| Msa1152930 | AT4G13640.2 | 54.717 | 53 | 20 | 1 | 66 | 114 | 38 | 90 | 5.84e-13 | 68.9 |
| Msa1152930 | AT3G12730.1 | 53.571 | 56 | 22 | 1 | 66 | 117 | 24 | 79 | 6.13e-13 | 68.2 |
| Msa1152930 | AT3G24120.2 | 54.717 | 53 | 20 | 1 | 66 | 114 | 42 | 94 | 6.72e-13 | 68.9 |
| Msa1152930 | AT3G24120.1 | 54.717 | 53 | 20 | 1 | 66 | 114 | 42 | 94 | 6.79e-13 | 68.9 |
| Msa1152930 | AT1G79430.2 | 53.571 | 56 | 22 | 1 | 66 | 117 | 35 | 90 | 1.61e-12 | 68.2 |
| Msa1152930 | AT2G40260.2 | 58.929 | 56 | 21 | 1 | 96 | 151 | 1 | 54 | 1.77e-12 | 67.4 |
| Msa1152930 | AT3G13040.3 | 56.140 | 57 | 21 | 1 | 67 | 119 | 243 | 299 | 1.79e-12 | 68.6 |
| Msa1152930 | AT3G13040.1 | 56.140 | 57 | 21 | 1 | 67 | 119 | 243 | 299 | 1.79e-12 | 68.6 |
| Msa1152930 | AT3G13040.2 | 56.140 | 57 | 21 | 1 | 67 | 119 | 243 | 299 | 1.79e-12 | 68.6 |
| Msa1152930 | AT1G69580.1 | 53.571 | 56 | 22 | 1 | 66 | 117 | 35 | 90 | 3.26e-12 | 67.0 |
| Msa1152930 | AT1G69580.2 | 53.571 | 56 | 22 | 1 | 66 | 117 | 35 | 90 | 3.53e-12 | 67.0 |
| Msa1152930 | AT5G06800.3 | 52.459 | 61 | 25 | 1 | 67 | 123 | 194 | 254 | 5.91e-12 | 65.9 |
| Msa1152930 | AT5G06800.2 | 52.459 | 61 | 25 | 1 | 67 | 123 | 194 | 254 | 9.07e-12 | 66.2 |
| Msa1152930 | AT5G06800.1 | 52.459 | 61 | 25 | 1 | 67 | 123 | 194 | 254 | 9.76e-12 | 65.9 |
| Msa1152930 | AT3G46640.2 | 55.556 | 54 | 21 | 1 | 64 | 114 | 143 | 196 | 1.10e-11 | 65.5 |
| Msa1152930 | AT3G46640.1 | 55.556 | 54 | 21 | 1 | 64 | 114 | 143 | 196 | 1.10e-11 | 65.5 |
| Msa1152930 | AT3G46640.3 | 55.556 | 54 | 21 | 1 | 64 | 114 | 143 | 196 | 1.59e-11 | 65.1 |
Find 56 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTGAAGAACCAATTT+TGG | 0.129269 | 7_4:+38985336 | None:intergenic |
| TGTTGATAGTTCTCTAAAAT+TGG | 0.214021 | 7_4:+38984015 | None:intergenic |
| CTTCAATTGATGAATATAAA+AGG | 0.228877 | 7_4:-38985324 | Msa1152930:CDS |
| GAGATTGATGTTGCTATTAT+TGG | 0.266239 | 7_4:+38984069 | None:intergenic |
| GAAAGGAGTCAATATTTCTT+TGG | 0.270906 | 7_4:-38983657 | Msa1152930:CDS |
| CTATATGATGATGTTTGATT+TGG | 0.300830 | 7_4:+38984914 | None:intergenic |
| GGAAATTATCATTTGGTTCA+TGG | 0.310661 | 7_4:+38983984 | None:intergenic |
| GAAAAGAAAAGCTTCAAATA+TGG | 0.323316 | 7_4:-38983846 | Msa1152930:CDS |
| TCATGTGAAGAGTCATTTAC+AGG | 0.340032 | 7_4:-38985289 | Msa1152930:intron |
| TGTAGGAGCAACTCCAAAAT+TGG | 0.369328 | 7_4:-38985349 | Msa1152930:intron |
| TAGAATATGTCTCATTCATA+TGG | 0.376004 | 7_4:+38983628 | None:intergenic |
| AGAAGAACAAGATAGTTCTA+AGG | 0.388489 | 7_4:-38983687 | Msa1152930:CDS |
| GCCTTGAAGCATGGGAAGTT+GGG | 0.390047 | 7_4:+38984943 | None:intergenic |
| ATTAATTGAAACACTTGCCT+TGG | 0.400061 | 7_4:+38985854 | None:intergenic |
| TATCACTAAAATTAAATTCA+AGG | 0.404007 | 7_4:-38983808 | Msa1152930:CDS |
| GATCATCTCTTAAAGATTCA+TGG | 0.404027 | 7_4:+38983948 | None:intergenic |
| AATGAGAGGAAATTATCATT+TGG | 0.404536 | 7_4:+38983977 | None:intergenic |
| TAAAATTGGATGAATCCATT+TGG | 0.405764 | 7_4:+38984029 | None:intergenic |
| CTTCATGCTGTGCAAAGACT+TGG | 0.407098 | 7_4:-38985654 | Msa1152930:intron |
| ACCCAACTTCCCATGCTTCA+AGG | 0.422458 | 7_4:-38984944 | Msa1152930:CDS |
| GAATCTAGAGCTGAGTTCTA+TGG | 0.429313 | 7_4:-38984109 | Msa1152930:CDS |
| CAAATCAAACATCATCATAT+AGG | 0.434083 | 7_4:-38984913 | Msa1152930:intron |
| TTTACAGATGTGGATCATAT+GGG | 0.447788 | 7_4:-38984183 | Msa1152930:intron |
| AATCATCTTATGTTTGCAAA+AGG | 0.448039 | 7_4:-38983715 | Msa1152930:CDS |
| TAACAGTGTTGGCTGATCAT+AGG | 0.450325 | 7_4:-38985006 | Msa1152930:intron |
| GAAATGAGATCTTGTGCTCT+TGG | 0.453092 | 7_4:+38983914 | None:intergenic |
| AGAAAACGAAAATGAAGATC+AGG | 0.462194 | 7_4:+38985675 | None:intergenic |
| CCAACGTAGCCTAGGCAACT+TGG | 0.470061 | 7_4:+38985701 | None:intergenic |
| AGCCTTGAAGCATGGGAAGT+TGG | 0.470813 | 7_4:+38984942 | None:intergenic |
| TAATAGCAACATCAATCTCC+AGG | 0.472235 | 7_4:-38984065 | Msa1152930:CDS |
| GGAGTATAGCCTTGAAGCAT+GGG | 0.488714 | 7_4:+38984935 | None:intergenic |
| ATGAGAGAGGAAGAAACATA+TGG | 0.490280 | 7_4:-38985888 | Msa1152930:CDS |
| TTCAAATATGGATCTTGAGT+TGG | 0.495575 | 7_4:-38983834 | Msa1152930:CDS |
| TGGAGTATAGCCTTGAAGCA+TGG | 0.512500 | 7_4:+38984934 | None:intergenic |
| GGCAACTTGGATCTAACATA+AGG | 0.518664 | 7_4:+38985714 | None:intergenic |
| ATGTTAGATCCAAGTTGCCT+AGG | 0.523365 | 7_4:-38985710 | Msa1152930:CDS |
| AGTTCTAAGGAGCAAGAGAA+AGG | 0.525178 | 7_4:-38983674 | Msa1152930:CDS |
| AAAGTAGTTGACACAAATCA+AGG | 0.545661 | 7_4:-38985133 | Msa1152930:intron |
| TGGTGATCATAAATGTATAG+AGG | 0.550152 | 7_4:-38983780 | Msa1152930:CDS |
| TTTGGAAAATACTATGACCC+TGG | 0.552012 | 7_4:+38984047 | None:intergenic |
| TCAGGAGTCCAACGTAGCCT+AGG | 0.559435 | 7_4:+38985693 | None:intergenic |
| CCAAGTTGCCTAGGCTACGT+TGG | 0.561524 | 7_4:-38985701 | Msa1152930:CDS |
| TCTTGCCATGTATGAAAACA+TGG | 0.579727 | 7_4:-38984152 | Msa1152930:CDS |
| CATAGGCTTCTTGTAGACAA+TGG | 0.581433 | 7_4:-38984989 | Msa1152930:CDS |
| CTAACATAAGGCCTCACTGA+TGG | 0.585574 | 7_4:+38985726 | None:intergenic |
| TTACAGATGTGGATCATATG+GGG | 0.594097 | 7_4:-38984182 | Msa1152930:intron |
| AAATTAAATTCAAGGAGCAA+TGG | 0.605129 | 7_4:-38983800 | Msa1152930:CDS |
| TAACTTGCCTGAAAATCAAG+AGG | 0.607982 | 7_4:-38983885 | Msa1152930:CDS |
| ATTCATGGCCACAAAATGAG+AGG | 0.620365 | 7_4:+38983963 | None:intergenic |
| GATGTGCAAAAGAACAACAA+TGG | 0.621747 | 7_4:-38985798 | Msa1152930:CDS |
| GATGATTGTGAAATTAGTGA+AGG | 0.638841 | 7_4:-38985828 | Msa1152930:CDS |
| AATAGCAACATCAATCTCCA+GGG | 0.643233 | 7_4:-38984064 | Msa1152930:CDS |
| ATATGGATCAGAATGTTCCA+AGG | 0.643313 | 7_4:-38985871 | Msa1152930:CDS |
| GTGCAAAAGAACAACAATGG+AGG | 0.658548 | 7_4:-38985795 | Msa1152930:CDS |
| TAGCTAGATGAATATGAGAG+AGG | 0.659511 | 7_4:-38985901 | None:intergenic |
| GTGAGAAGAAACCATCAGTG+AGG | 0.735513 | 7_4:-38985737 | Msa1152930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATTTTATTTTT+TGG | + | chr7_4:38985163-38985182 | None:intergenic | 0.0% |
| !!! | ATTTTTTTAATTTTATTTTT+TGG | + | chr7_4:38985163-38985182 | None:intergenic | 0.0% |
| !! | TAAAAAGTCATAGATAAATA+TGG | - | chr7_4:38984265-38984284 | Msa1152930:intron | 15.0% |
| !! | AATAAGTGATTACATAATTA+GGG | - | chr7_4:38984460-38984479 | Msa1152930:intron | 15.0% |
| !!! | ATTAACCGTTTTTTTTTTTA+TGG | - | chr7_4:38984659-38984678 | Msa1152930:intron | 15.0% |
| !! | ATTCTCCATAAAAAAAAAAA+CGG | + | chr7_4:38984667-38984686 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTACAGATG+TGG | - | chr7_4:38985338-38985357 | Msa1152930:CDS | 15.0% |
| !! | TATCACTAAAATTAAATTCA+AGG | - | chr7_4:38985723-38985742 | Msa1152930:CDS | 15.0% |
| !! | TAAAAAGTCATAGATAAATA+TGG | - | chr7_4:38984265-38984284 | Msa1152930:intron | 15.0% |
| !! | AATAAGTGATTACATAATTA+GGG | - | chr7_4:38984460-38984479 | Msa1152930:intron | 15.0% |
| !!! | ATTAACCGTTTTTTTTTTTA+TGG | - | chr7_4:38984659-38984678 | Msa1152930:intron | 15.0% |
| !! | ATTCTCCATAAAAAAAAAAA+CGG | + | chr7_4:38984667-38984686 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTACAGATG+TGG | - | chr7_4:38985338-38985357 | Msa1152930:CDS | 15.0% |
| !! | TATCACTAAAATTAAATTCA+AGG | - | chr7_4:38985723-38985742 | Msa1152930:CDS | 15.0% |
| !! | GAAAAATTGAAATCTAGAAA+AGG | + | chr7_4:38984044-38984063 | None:intergenic | 20.0% |
| !!! | TCTAGATTTCAATTTTTCAT+AGG | - | chr7_4:38984046-38984065 | Msa1152930:CDS | 20.0% |
| !!! | CTAGATTTCAATTTTTCATA+GGG | - | chr7_4:38984047-38984066 | Msa1152930:CDS | 20.0% |
| !!! | TAGATTTCAATTTTTCATAG+GGG | - | chr7_4:38984048-38984067 | Msa1152930:CDS | 20.0% |
| !! | CTTCAATTGATGAATATAAA+AGG | - | chr7_4:38984207-38984226 | Msa1152930:intron | 20.0% |
| !! | CAATAAGTGATTACATAATT+AGG | - | chr7_4:38984459-38984478 | Msa1152930:intron | 20.0% |
| !!! | AAGACCTTTTTTTATTCATA+GGG | - | chr7_4:38984811-38984830 | Msa1152930:intron | 20.0% |
| !!! | AAGACCTTTTTTTATTCATA+GGG | - | chr7_4:38984811-38984830 | Msa1152930:intron | 20.0% |
| !!! | AAGACCTTTTTTTATTCATA+GGG | - | chr7_4:38984811-38984830 | Msa1152930:intron | 20.0% |
| !!! | TTTTATTTTTTGGTCAAGTT+CGG | + | chr7_4:38985153-38985172 | None:intergenic | 20.0% |
| !!! | TTTTAAACGTAAATGACTTA+AGG | + | chr7_4:38985238-38985257 | None:intergenic | 20.0% |
| !! | GAAAAATTGAAATCTAGAAA+AGG | + | chr7_4:38984044-38984063 | None:intergenic | 20.0% |
| !!! | TCTAGATTTCAATTTTTCAT+AGG | - | chr7_4:38984046-38984065 | Msa1152930:CDS | 20.0% |
| !!! | CTAGATTTCAATTTTTCATA+GGG | - | chr7_4:38984047-38984066 | Msa1152930:CDS | 20.0% |
| !!! | TAGATTTCAATTTTTCATAG+GGG | - | chr7_4:38984048-38984067 | Msa1152930:CDS | 20.0% |
| !! | CTTCAATTGATGAATATAAA+AGG | - | chr7_4:38984207-38984226 | Msa1152930:intron | 20.0% |
| !! | CAATAAGTGATTACATAATT+AGG | - | chr7_4:38984459-38984478 | Msa1152930:intron | 20.0% |
| !!! | AAGACCTTTTTTTATTCATA+GGG | - | chr7_4:38984811-38984830 | Msa1152930:intron | 20.0% |
| !!! | AAGACCTTTTTTTATTCATA+GGG | - | chr7_4:38984811-38984830 | Msa1152930:intron | 20.0% |
| !!! | AAGACCTTTTTTTATTCATA+GGG | - | chr7_4:38984811-38984830 | Msa1152930:intron | 20.0% |
| !!! | TTTTATTTTTTGGTCAAGTT+CGG | + | chr7_4:38985153-38985172 | None:intergenic | 20.0% |
| !!! | TTTTAAACGTAAATGACTTA+AGG | + | chr7_4:38985238-38985257 | None:intergenic | 20.0% |
| ! | ATACATATATGTTATGTGTG+TGG | + | chr7_4:38983921-38983940 | None:intergenic | 25.0% |
| !! | TTAATGATTTTCTTGTGTGT+AGG | - | chr7_4:38984165-38984184 | Msa1152930:CDS | 25.0% |
| !! | ATCAATTGAAGAACCAATTT+TGG | + | chr7_4:38984198-38984217 | None:intergenic | 25.0% |
| ! | TTGTATATATGTAACAGTGT+TGG | - | chr7_4:38984514-38984533 | Msa1152930:intron | 25.0% |
| !! | CTATATGATGATGTTTGATT+TGG | + | chr7_4:38984620-38984639 | None:intergenic | 25.0% |
| ! | CAAATCAAACATCATCATAT+AGG | - | chr7_4:38984618-38984637 | Msa1152930:intron | 25.0% |
| !!! | TAAAAAAAGGTCTTGTTAAC+CGG | + | chr7_4:38984805-38984824 | None:intergenic | 25.0% |
| !!! | CAAGACCTTTTTTTATTCAT+AGG | - | chr7_4:38984810-38984829 | Msa1152930:intron | 25.0% |
| ! | TGATCCCTATGAATAAAAAA+AGG | + | chr7_4:38984818-38984837 | None:intergenic | 25.0% |
| !!! | TAAAAAAAGGTCTTGTTAAC+CGG | + | chr7_4:38984805-38984824 | None:intergenic | 25.0% |
| !!! | CAAGACCTTTTTTTATTCAT+AGG | - | chr7_4:38984810-38984829 | Msa1152930:intron | 25.0% |
| ! | TGATCCCTATGAATAAAAAA+AGG | + | chr7_4:38984818-38984837 | None:intergenic | 25.0% |
| !!! | TAAAAAAAGGTCTTGTTAAC+CGG | + | chr7_4:38984805-38984824 | None:intergenic | 25.0% |
| !!! | CAAGACCTTTTTTTATTCAT+AGG | - | chr7_4:38984810-38984829 | Msa1152930:intron | 25.0% |
| ! | TGATCCCTATGAATAAAAAA+AGG | + | chr7_4:38984818-38984837 | None:intergenic | 25.0% |
| ! | AGTTATCAAAACAAGTACAA+AGG | - | chr7_4:38985110-38985129 | Msa1152930:intron | 25.0% |
| ! | GTTATCAAAACAAGTACAAA+GGG | - | chr7_4:38985111-38985130 | Msa1152930:intron | 25.0% |
| ! | GTAAATGACTTAAGGAAATT+TGG | + | chr7_4:38985230-38985249 | None:intergenic | 25.0% |
| ! | TGTTATTGTCTTAGAATTGA+AGG | - | chr7_4:38985311-38985330 | Msa1152930:CDS | 25.0% |
| ! | TAAAATTGGATGAATCCATT+TGG | + | chr7_4:38985505-38985524 | None:intergenic | 25.0% |
| !!! | TGTTGATAGTTCTCTAAAAT+TGG | + | chr7_4:38985519-38985538 | None:intergenic | 25.0% |
| ! | AATGAGAGGAAATTATCATT+TGG | + | chr7_4:38985557-38985576 | None:intergenic | 25.0% |
| ! | GAAAAGAAAAGCTTCAAATA+TGG | - | chr7_4:38985685-38985704 | Msa1152930:CDS | 25.0% |
| ! | AAATTAAATTCAAGGAGCAA+TGG | - | chr7_4:38985731-38985750 | Msa1152930:CDS | 25.0% |
| ! | AATCATCTTATGTTTGCAAA+AGG | - | chr7_4:38985816-38985835 | Msa1152930:CDS | 25.0% |
| ! | ATACATATATGTTATGTGTG+TGG | + | chr7_4:38983921-38983940 | None:intergenic | 25.0% |
| !! | TTAATGATTTTCTTGTGTGT+AGG | - | chr7_4:38984165-38984184 | Msa1152930:CDS | 25.0% |
| !! | ATCAATTGAAGAACCAATTT+TGG | + | chr7_4:38984198-38984217 | None:intergenic | 25.0% |
| ! | TTGTATATATGTAACAGTGT+TGG | - | chr7_4:38984514-38984533 | Msa1152930:intron | 25.0% |
| !! | CTATATGATGATGTTTGATT+TGG | + | chr7_4:38984620-38984639 | None:intergenic | 25.0% |
| ! | CAAATCAAACATCATCATAT+AGG | - | chr7_4:38984618-38984637 | Msa1152930:intron | 25.0% |
| !!! | TAAAAAAAGGTCTTGTTAAC+CGG | + | chr7_4:38984805-38984824 | None:intergenic | 25.0% |
| !!! | CAAGACCTTTTTTTATTCAT+AGG | - | chr7_4:38984810-38984829 | Msa1152930:intron | 25.0% |
| ! | TGATCCCTATGAATAAAAAA+AGG | + | chr7_4:38984818-38984837 | None:intergenic | 25.0% |
| !!! | TAAAAAAAGGTCTTGTTAAC+CGG | + | chr7_4:38984805-38984824 | None:intergenic | 25.0% |
| !!! | CAAGACCTTTTTTTATTCAT+AGG | - | chr7_4:38984810-38984829 | Msa1152930:intron | 25.0% |
| ! | TGATCCCTATGAATAAAAAA+AGG | + | chr7_4:38984818-38984837 | None:intergenic | 25.0% |
| !!! | TAAAAAAAGGTCTTGTTAAC+CGG | + | chr7_4:38984805-38984824 | None:intergenic | 25.0% |
| !!! | CAAGACCTTTTTTTATTCAT+AGG | - | chr7_4:38984810-38984829 | Msa1152930:intron | 25.0% |
| ! | TGATCCCTATGAATAAAAAA+AGG | + | chr7_4:38984818-38984837 | None:intergenic | 25.0% |
| ! | AGTTATCAAAACAAGTACAA+AGG | - | chr7_4:38985110-38985129 | Msa1152930:intron | 25.0% |
| ! | GTTATCAAAACAAGTACAAA+GGG | - | chr7_4:38985111-38985130 | Msa1152930:intron | 25.0% |
| ! | GTAAATGACTTAAGGAAATT+TGG | + | chr7_4:38985230-38985249 | None:intergenic | 25.0% |
| ! | TGTTATTGTCTTAGAATTGA+AGG | - | chr7_4:38985311-38985330 | Msa1152930:CDS | 25.0% |
| ! | TAAAATTGGATGAATCCATT+TGG | + | chr7_4:38985505-38985524 | None:intergenic | 25.0% |
| !!! | TGTTGATAGTTCTCTAAAAT+TGG | + | chr7_4:38985519-38985538 | None:intergenic | 25.0% |
| ! | AATGAGAGGAAATTATCATT+TGG | + | chr7_4:38985557-38985576 | None:intergenic | 25.0% |
| ! | GAAAAGAAAAGCTTCAAATA+TGG | - | chr7_4:38985685-38985704 | Msa1152930:CDS | 25.0% |
| ! | AAATTAAATTCAAGGAGCAA+TGG | - | chr7_4:38985731-38985750 | Msa1152930:CDS | 25.0% |
| ! | AATCATCTTATGTTTGCAAA+AGG | - | chr7_4:38985816-38985835 | Msa1152930:CDS | 25.0% |
| ATTAATTGAAACACTTGCCT+TGG | + | chr7_4:38983680-38983699 | None:intergenic | 30.0% | |
| GATGATTGTGAAATTAGTGA+AGG | - | chr7_4:38983703-38983722 | Msa1152930:CDS | 30.0% | |
| AGAAAACGAAAATGAAGATC+AGG | + | chr7_4:38983859-38983878 | None:intergenic | 30.0% | |
| GTAACCTAGAATTTACAACA+TGG | - | chr7_4:38983975-38983994 | Msa1152930:CDS | 30.0% | |
| ATCTATGTGTTTGATCATCA+TGG | + | chr7_4:38984007-38984026 | None:intergenic | 30.0% | |
| TTCAATATCAAGTTAGTCCT+AGG | - | chr7_4:38984073-38984092 | Msa1152930:CDS | 30.0% | |
| TTGAATTGATTAACCTACCT+AGG | + | chr7_4:38984093-38984112 | None:intergenic | 30.0% | |
| AAAGCTAGCTAGCTATATAT+AGG | + | chr7_4:38984297-38984316 | None:intergenic | 30.0% | |
| AAAGTAGTTGACACAAATCA+AGG | - | chr7_4:38984398-38984417 | Msa1152930:intron | 30.0% | |
| ACACAAATCAAGGTACAATA+AGG | - | chr7_4:38984408-38984427 | Msa1152930:intron | 30.0% | |
| ATAAGATGTTACAACGAGAA+GGG | + | chr7_4:38984847-38984866 | None:intergenic | 30.0% | |
| TATAAGATGTTACAACGAGA+AGG | + | chr7_4:38984848-38984867 | None:intergenic | 30.0% | |
| ATAAGATGTTACAACGAGAA+GGG | + | chr7_4:38984847-38984866 | None:intergenic | 30.0% | |
| TATAAGATGTTACAACGAGA+AGG | + | chr7_4:38984848-38984867 | None:intergenic | 30.0% | |
| ATTCTTATCGAAAAACGAGA+AGG | + | chr7_4:38985088-38985107 | None:intergenic | 30.0% | |
| ! | AAGGAAATTTGGAACAAAGT+TGG | + | chr7_4:38985219-38985238 | None:intergenic | 30.0% |
| ! | CGTTTAAAATTGTAACCTCA+AGG | - | chr7_4:38985249-38985268 | Msa1152930:intron | 30.0% |
| ! | GATTTGAAGTTTAAACCTTG+AGG | + | chr7_4:38985267-38985286 | None:intergenic | 30.0% |
| ! | AGTAATTTTACAACTGTCGT+TGG | + | chr7_4:38985292-38985311 | None:intergenic | 30.0% |
| ! | TTTTACAGATGTGGATCATA+TGG | - | chr7_4:38985347-38985366 | Msa1152930:CDS | 30.0% |
| TTTACAGATGTGGATCATAT+GGG | - | chr7_4:38985348-38985367 | Msa1152930:intron | 30.0% | |
| ! | TTGTACCATGTTTTCATACA+TGG | + | chr7_4:38985387-38985406 | None:intergenic | 30.0% |
| ! | GAGATTGATGTTGCTATTAT+TGG | + | chr7_4:38985465-38985484 | None:intergenic | 30.0% |
| ! | GGAAATTATCATTTGGTTCA+TGG | + | chr7_4:38985550-38985569 | None:intergenic | 30.0% |
| ! | GATAATTTCCTCTCATTTTG+TGG | - | chr7_4:38985560-38985579 | Msa1152930:intron | 30.0% |
| GATCATCTCTTAAAGATTCA+TGG | + | chr7_4:38985586-38985605 | None:intergenic | 30.0% | |
| TTCAAATATGGATCTTGAGT+TGG | - | chr7_4:38985697-38985716 | Msa1152930:CDS | 30.0% | |
| TGGTGATCATAAATGTATAG+AGG | - | chr7_4:38985751-38985770 | Msa1152930:CDS | 30.0% | |
| ! | AGAAGAACAAGATAGTTCTA+AGG | - | chr7_4:38985844-38985863 | Msa1152930:CDS | 30.0% |
| GAAAGGAGTCAATATTTCTT+TGG | - | chr7_4:38985874-38985893 | Msa1152930:CDS | 30.0% | |
| ATTAATTGAAACACTTGCCT+TGG | + | chr7_4:38983680-38983699 | None:intergenic | 30.0% | |
| GATGATTGTGAAATTAGTGA+AGG | - | chr7_4:38983703-38983722 | Msa1152930:CDS | 30.0% | |
| AGAAAACGAAAATGAAGATC+AGG | + | chr7_4:38983859-38983878 | None:intergenic | 30.0% | |
| GTAACCTAGAATTTACAACA+TGG | - | chr7_4:38983975-38983994 | Msa1152930:CDS | 30.0% | |
| ATCTATGTGTTTGATCATCA+TGG | + | chr7_4:38984007-38984026 | None:intergenic | 30.0% | |
| TTCAATATCAAGTTAGTCCT+AGG | - | chr7_4:38984073-38984092 | Msa1152930:CDS | 30.0% | |
| TTGAATTGATTAACCTACCT+AGG | + | chr7_4:38984093-38984112 | None:intergenic | 30.0% | |
| AAAGCTAGCTAGCTATATAT+AGG | + | chr7_4:38984297-38984316 | None:intergenic | 30.0% | |
| AAAGTAGTTGACACAAATCA+AGG | - | chr7_4:38984398-38984417 | Msa1152930:intron | 30.0% | |
| ACACAAATCAAGGTACAATA+AGG | - | chr7_4:38984408-38984427 | Msa1152930:intron | 30.0% | |
| ATAAGATGTTACAACGAGAA+GGG | + | chr7_4:38984847-38984866 | None:intergenic | 30.0% | |
| TATAAGATGTTACAACGAGA+AGG | + | chr7_4:38984848-38984867 | None:intergenic | 30.0% | |
| ATAAGATGTTACAACGAGAA+GGG | + | chr7_4:38984847-38984866 | None:intergenic | 30.0% | |
| TATAAGATGTTACAACGAGA+AGG | + | chr7_4:38984848-38984867 | None:intergenic | 30.0% | |
| ATTCTTATCGAAAAACGAGA+AGG | + | chr7_4:38985088-38985107 | None:intergenic | 30.0% | |
| ! | AAGGAAATTTGGAACAAAGT+TGG | + | chr7_4:38985219-38985238 | None:intergenic | 30.0% |
| ! | CGTTTAAAATTGTAACCTCA+AGG | - | chr7_4:38985249-38985268 | Msa1152930:intron | 30.0% |
| ! | GATTTGAAGTTTAAACCTTG+AGG | + | chr7_4:38985267-38985286 | None:intergenic | 30.0% |
| ! | AGTAATTTTACAACTGTCGT+TGG | + | chr7_4:38985292-38985311 | None:intergenic | 30.0% |
| ! | TTTTACAGATGTGGATCATA+TGG | - | chr7_4:38985347-38985366 | Msa1152930:CDS | 30.0% |
| TTTACAGATGTGGATCATAT+GGG | - | chr7_4:38985348-38985367 | Msa1152930:intron | 30.0% | |
| ! | TTGTACCATGTTTTCATACA+TGG | + | chr7_4:38985387-38985406 | None:intergenic | 30.0% |
| ! | GAGATTGATGTTGCTATTAT+TGG | + | chr7_4:38985465-38985484 | None:intergenic | 30.0% |
| ! | GGAAATTATCATTTGGTTCA+TGG | + | chr7_4:38985550-38985569 | None:intergenic | 30.0% |
| ! | GATAATTTCCTCTCATTTTG+TGG | - | chr7_4:38985560-38985579 | Msa1152930:intron | 30.0% |
| GATCATCTCTTAAAGATTCA+TGG | + | chr7_4:38985586-38985605 | None:intergenic | 30.0% | |
| TTCAAATATGGATCTTGAGT+TGG | - | chr7_4:38985697-38985716 | Msa1152930:CDS | 30.0% | |
| TGGTGATCATAAATGTATAG+AGG | - | chr7_4:38985751-38985770 | Msa1152930:CDS | 30.0% | |
| ! | AGAAGAACAAGATAGTTCTA+AGG | - | chr7_4:38985844-38985863 | Msa1152930:CDS | 30.0% |
| GAAAGGAGTCAATATTTCTT+TGG | - | chr7_4:38985874-38985893 | Msa1152930:CDS | 30.0% | |
| ATGAGAGAGGAAGAAACATA+TGG | - | chr7_4:38983643-38983662 | Msa1152930:CDS | 35.0% | |
| ATATGGATCAGAATGTTCCA+AGG | - | chr7_4:38983660-38983679 | Msa1152930:CDS | 35.0% | |
| GATGTGCAAAAGAACAACAA+TGG | - | chr7_4:38983733-38983752 | Msa1152930:CDS | 35.0% | |
| CACACCATGTTGTAAATTCT+AGG | + | chr7_4:38983982-38984001 | None:intergenic | 35.0% | |
| CTAGAATTTACAACATGGTG+TGG | - | chr7_4:38983980-38983999 | Msa1152930:CDS | 35.0% | |
| ATATCAAGTTAGTCCTAGGT+AGG | - | chr7_4:38984077-38984096 | Msa1152930:CDS | 35.0% | |
| TCATGTGAAGAGTCATTTAC+AGG | - | chr7_4:38984242-38984261 | Msa1152930:intron | 35.0% | |
| CTTTCTTGCTTCTATACATC+TGG | + | chr7_4:38984382-38984401 | None:intergenic | 35.0% | |
| ! | AATTTTACAACTGTCGTTGG+AGG | + | chr7_4:38985289-38985308 | None:intergenic | 35.0% |
| TTACAGATGTGGATCATATG+GGG | - | chr7_4:38985349-38985368 | Msa1152930:intron | 35.0% | |
| TCTTGCCATGTATGAAAACA+TGG | - | chr7_4:38985379-38985398 | Msa1152930:intron | 35.0% | |
| TAATAGCAACATCAATCTCC+AGG | - | chr7_4:38985466-38985485 | Msa1152930:intron | 35.0% | |
| AATAGCAACATCAATCTCCA+GGG | - | chr7_4:38985467-38985486 | Msa1152930:intron | 35.0% | |
| TTTGGAAAATACTATGACCC+TGG | + | chr7_4:38985487-38985506 | None:intergenic | 35.0% | |
| ! | GGGTCATAGTATTTTCCAAA+TGG | - | chr7_4:38985487-38985506 | Msa1152930:intron | 35.0% |
| ! | TAACTTGCCTGAAAATCAAG+AGG | - | chr7_4:38985646-38985665 | Msa1152930:intron | 35.0% |
| ! | AGTTCTTCCTCTTGATTTTC+AGG | + | chr7_4:38985656-38985675 | None:intergenic | 35.0% |
| ATGAGAGAGGAAGAAACATA+TGG | - | chr7_4:38983643-38983662 | Msa1152930:CDS | 35.0% | |
| ATATGGATCAGAATGTTCCA+AGG | - | chr7_4:38983660-38983679 | Msa1152930:CDS | 35.0% | |
| GATGTGCAAAAGAACAACAA+TGG | - | chr7_4:38983733-38983752 | Msa1152930:CDS | 35.0% | |
| CACACCATGTTGTAAATTCT+AGG | + | chr7_4:38983982-38984001 | None:intergenic | 35.0% | |
| CTAGAATTTACAACATGGTG+TGG | - | chr7_4:38983980-38983999 | Msa1152930:CDS | 35.0% | |
| ATATCAAGTTAGTCCTAGGT+AGG | - | chr7_4:38984077-38984096 | Msa1152930:CDS | 35.0% | |
| TCATGTGAAGAGTCATTTAC+AGG | - | chr7_4:38984242-38984261 | Msa1152930:intron | 35.0% | |
| CTTTCTTGCTTCTATACATC+TGG | + | chr7_4:38984382-38984401 | None:intergenic | 35.0% | |
| ! | AATTTTACAACTGTCGTTGG+AGG | + | chr7_4:38985289-38985308 | None:intergenic | 35.0% |
| TTACAGATGTGGATCATATG+GGG | - | chr7_4:38985349-38985368 | Msa1152930:intron | 35.0% | |
| TCTTGCCATGTATGAAAACA+TGG | - | chr7_4:38985379-38985398 | Msa1152930:intron | 35.0% | |
| TAATAGCAACATCAATCTCC+AGG | - | chr7_4:38985466-38985485 | Msa1152930:intron | 35.0% | |
| AATAGCAACATCAATCTCCA+GGG | - | chr7_4:38985467-38985486 | Msa1152930:intron | 35.0% | |
| TTTGGAAAATACTATGACCC+TGG | + | chr7_4:38985487-38985506 | None:intergenic | 35.0% | |
| ! | GGGTCATAGTATTTTCCAAA+TGG | - | chr7_4:38985487-38985506 | Msa1152930:intron | 35.0% |
| ! | TAACTTGCCTGAAAATCAAG+AGG | - | chr7_4:38985646-38985665 | Msa1152930:intron | 35.0% |
| ! | AGTTCTTCCTCTTGATTTTC+AGG | + | chr7_4:38985656-38985675 | None:intergenic | 35.0% |
| GTGCAAAAGAACAACAATGG+AGG | - | chr7_4:38983736-38983755 | Msa1152930:CDS | 40.0% | |
| GGCAACTTGGATCTAACATA+AGG | + | chr7_4:38983820-38983839 | None:intergenic | 40.0% | |
| ATGTTAGATCCAAGTTGCCT+AGG | - | chr7_4:38983821-38983840 | Msa1152930:CDS | 40.0% | |
| TGTAGGAGCAACTCCAAAAT+TGG | - | chr7_4:38984182-38984201 | Msa1152930:intron | 40.0% | |
| !! | TAACAGTGTTGGCTGATCAT+AGG | - | chr7_4:38984525-38984544 | Msa1152930:intron | 40.0% |
| CATAGGCTTCTTGTAGACAA+TGG | - | chr7_4:38984542-38984561 | Msa1152930:intron | 40.0% | |
| ATCTTTAACCATTACCCCTG+AGG | - | chr7_4:38984776-38984795 | Msa1152930:intron | 40.0% | |
| TCTTTAACCATTACCCCTGA+GGG | - | chr7_4:38984777-38984796 | Msa1152930:intron | 40.0% | |
| ATCTTTAACCATTACCCCTG+AGG | - | chr7_4:38984776-38984795 | Msa1152930:intron | 40.0% | |
| TCTTTAACCATTACCCCTGA+GGG | - | chr7_4:38984777-38984796 | Msa1152930:intron | 40.0% | |
| ATCTTTAACCATTACCCCTG+AGG | - | chr7_4:38984776-38984795 | Msa1152930:intron | 40.0% | |
| TCTTTAACCATTACCCCTGA+GGG | - | chr7_4:38984777-38984796 | Msa1152930:intron | 40.0% | |
| ! | GAATCTAGAGCTGAGTTCTA+TGG | - | chr7_4:38985422-38985441 | Msa1152930:intron | 40.0% |
| ATTCATGGCCACAAAATGAG+AGG | + | chr7_4:38985571-38985590 | None:intergenic | 40.0% | |
| GAAATGAGATCTTGTGCTCT+TGG | + | chr7_4:38985620-38985639 | None:intergenic | 40.0% | |
| !! | AGTTCTAAGGAGCAAGAGAA+AGG | - | chr7_4:38985857-38985876 | Msa1152930:CDS | 40.0% |
| GTGCAAAAGAACAACAATGG+AGG | - | chr7_4:38983736-38983755 | Msa1152930:CDS | 40.0% | |
| GGCAACTTGGATCTAACATA+AGG | + | chr7_4:38983820-38983839 | None:intergenic | 40.0% | |
| ATGTTAGATCCAAGTTGCCT+AGG | - | chr7_4:38983821-38983840 | Msa1152930:CDS | 40.0% | |
| TGTAGGAGCAACTCCAAAAT+TGG | - | chr7_4:38984182-38984201 | Msa1152930:intron | 40.0% | |
| !! | TAACAGTGTTGGCTGATCAT+AGG | - | chr7_4:38984525-38984544 | Msa1152930:intron | 40.0% |
| CATAGGCTTCTTGTAGACAA+TGG | - | chr7_4:38984542-38984561 | Msa1152930:intron | 40.0% | |
| ATCTTTAACCATTACCCCTG+AGG | - | chr7_4:38984776-38984795 | Msa1152930:intron | 40.0% | |
| TCTTTAACCATTACCCCTGA+GGG | - | chr7_4:38984777-38984796 | Msa1152930:intron | 40.0% | |
| ATCTTTAACCATTACCCCTG+AGG | - | chr7_4:38984776-38984795 | Msa1152930:intron | 40.0% | |
| TCTTTAACCATTACCCCTGA+GGG | - | chr7_4:38984777-38984796 | Msa1152930:intron | 40.0% | |
| ATCTTTAACCATTACCCCTG+AGG | - | chr7_4:38984776-38984795 | Msa1152930:intron | 40.0% | |
| TCTTTAACCATTACCCCTGA+GGG | - | chr7_4:38984777-38984796 | Msa1152930:intron | 40.0% | |
| ! | GAATCTAGAGCTGAGTTCTA+TGG | - | chr7_4:38985422-38985441 | Msa1152930:intron | 40.0% |
| ATTCATGGCCACAAAATGAG+AGG | + | chr7_4:38985571-38985590 | None:intergenic | 40.0% | |
| GAAATGAGATCTTGTGCTCT+TGG | + | chr7_4:38985620-38985639 | None:intergenic | 40.0% | |
| !! | AGTTCTAAGGAGCAAGAGAA+AGG | - | chr7_4:38985857-38985876 | Msa1152930:CDS | 40.0% |
| GTGAGAAGAAACCATCAGTG+AGG | - | chr7_4:38983794-38983813 | Msa1152930:CDS | 45.0% | |
| CTAACATAAGGCCTCACTGA+TGG | + | chr7_4:38983808-38983827 | None:intergenic | 45.0% | |
| CTTCATGCTGTGCAAAGACT+TGG | - | chr7_4:38983877-38983896 | Msa1152930:CDS | 45.0% | |
| ! | ATGCTGTGCAAAGACTTGGT+GGG | - | chr7_4:38983881-38983900 | Msa1152930:CDS | 45.0% |
| ! | GGAGTATAGCCTTGAAGCAT+GGG | + | chr7_4:38984599-38984618 | None:intergenic | 45.0% |
| ! | TGGAGTATAGCCTTGAAGCA+TGG | + | chr7_4:38984600-38984619 | None:intergenic | 45.0% |
| AATGCTAACTAGTGCCCCAA+GGG | - | chr7_4:38984684-38984703 | Msa1152930:intron | 45.0% | |
| TTAACCAATGCATGCCCTTG+GGG | + | chr7_4:38984701-38984720 | None:intergenic | 45.0% | |
| CTTAACCAATGCATGCCCTT+GGG | + | chr7_4:38984702-38984721 | None:intergenic | 45.0% | |
| GTGAGAAGAAACCATCAGTG+AGG | - | chr7_4:38983794-38983813 | Msa1152930:CDS | 45.0% | |
| CTAACATAAGGCCTCACTGA+TGG | + | chr7_4:38983808-38983827 | None:intergenic | 45.0% | |
| CTTCATGCTGTGCAAAGACT+TGG | - | chr7_4:38983877-38983896 | Msa1152930:CDS | 45.0% | |
| ! | ATGCTGTGCAAAGACTTGGT+GGG | - | chr7_4:38983881-38983900 | Msa1152930:CDS | 45.0% |
| ! | GGAGTATAGCCTTGAAGCAT+GGG | + | chr7_4:38984599-38984618 | None:intergenic | 45.0% |
| ! | TGGAGTATAGCCTTGAAGCA+TGG | + | chr7_4:38984600-38984619 | None:intergenic | 45.0% |
| AATGCTAACTAGTGCCCCAA+GGG | - | chr7_4:38984684-38984703 | Msa1152930:intron | 45.0% | |
| TTAACCAATGCATGCCCTTG+GGG | + | chr7_4:38984701-38984720 | None:intergenic | 45.0% | |
| CTTAACCAATGCATGCCCTT+GGG | + | chr7_4:38984702-38984721 | None:intergenic | 45.0% | |
| CATGCTGTGCAAAGACTTGG+TGG | - | chr7_4:38983880-38983899 | Msa1152930:CDS | 50.0% | |
| ACCCAACTTCCCATGCTTCA+AGG | - | chr7_4:38984587-38984606 | Msa1152930:intron | 50.0% | |
| GCCTTGAAGCATGGGAAGTT+GGG | + | chr7_4:38984591-38984610 | None:intergenic | 50.0% | |
| AGCCTTGAAGCATGGGAAGT+TGG | + | chr7_4:38984592-38984611 | None:intergenic | 50.0% | |
| GAATGCTAACTAGTGCCCCA+AGG | - | chr7_4:38984683-38984702 | Msa1152930:intron | 50.0% | |
| GCTTAACCAATGCATGCCCT+TGG | + | chr7_4:38984703-38984722 | None:intergenic | 50.0% | |
| TTGTTAACCGGTACCCTCAG+GGG | + | chr7_4:38984793-38984812 | None:intergenic | 50.0% | |
| CTTGTTAACCGGTACCCTCA+GGG | + | chr7_4:38984794-38984813 | None:intergenic | 50.0% | |
| TCTTGTTAACCGGTACCCTC+AGG | + | chr7_4:38984795-38984814 | None:intergenic | 50.0% | |
| CATGCTGTGCAAAGACTTGG+TGG | - | chr7_4:38983880-38983899 | Msa1152930:CDS | 50.0% | |
| ACCCAACTTCCCATGCTTCA+AGG | - | chr7_4:38984587-38984606 | Msa1152930:intron | 50.0% | |
| GCCTTGAAGCATGGGAAGTT+GGG | + | chr7_4:38984591-38984610 | None:intergenic | 50.0% | |
| AGCCTTGAAGCATGGGAAGT+TGG | + | chr7_4:38984592-38984611 | None:intergenic | 50.0% | |
| GAATGCTAACTAGTGCCCCA+AGG | - | chr7_4:38984683-38984702 | Msa1152930:intron | 50.0% | |
| GCTTAACCAATGCATGCCCT+TGG | + | chr7_4:38984703-38984722 | None:intergenic | 50.0% | |
| TTGTTAACCGGTACCCTCAG+GGG | + | chr7_4:38984793-38984812 | None:intergenic | 50.0% | |
| CTTGTTAACCGGTACCCTCA+GGG | + | chr7_4:38984794-38984813 | None:intergenic | 50.0% | |
| TCTTGTTAACCGGTACCCTC+AGG | + | chr7_4:38984795-38984814 | None:intergenic | 50.0% | |
| CCAACGTAGCCTAGGCAACT+TGG | + | chr7_4:38983833-38983852 | None:intergenic | 55.0% | |
| CCAAGTTGCCTAGGCTACGT+TGG | - | chr7_4:38983830-38983849 | Msa1152930:CDS | 55.0% | |
| TCAGGAGTCCAACGTAGCCT+AGG | + | chr7_4:38983841-38983860 | None:intergenic | 55.0% | |
| ! | ACCATTACCCCTGAGGGTAC+CGG | - | chr7_4:38984783-38984802 | Msa1152930:intron | 55.0% |
| TTGTTAACCGGTGCCCTCAG+GGG | + | chr7_4:38984913-38984932 | None:intergenic | 55.0% | |
| CTTGTTAACCGGTGCCCTCA+GGG | + | chr7_4:38984914-38984933 | None:intergenic | 55.0% | |
| TCTTGTTAACCGGTGCCCTC+AGG | + | chr7_4:38984915-38984934 | None:intergenic | 55.0% | |
| TTGTTAACCGGTGCCCTCAG+GGG | + | chr7_4:38984913-38984932 | None:intergenic | 55.0% | |
| CTTGTTAACCGGTGCCCTCA+GGG | + | chr7_4:38984914-38984933 | None:intergenic | 55.0% | |
| TCTTGTTAACCGGTGCCCTC+AGG | + | chr7_4:38984915-38984934 | None:intergenic | 55.0% | |
| CCAACGTAGCCTAGGCAACT+TGG | + | chr7_4:38983833-38983852 | None:intergenic | 55.0% | |
| CCAAGTTGCCTAGGCTACGT+TGG | - | chr7_4:38983830-38983849 | Msa1152930:CDS | 55.0% | |
| TCAGGAGTCCAACGTAGCCT+AGG | + | chr7_4:38983841-38983860 | None:intergenic | 55.0% | |
| ! | ACCATTACCCCTGAGGGTAC+CGG | - | chr7_4:38984783-38984802 | Msa1152930:intron | 55.0% |
| TTGTTAACCGGTGCCCTCAG+GGG | + | chr7_4:38984913-38984932 | None:intergenic | 55.0% | |
| CTTGTTAACCGGTGCCCTCA+GGG | + | chr7_4:38984914-38984933 | None:intergenic | 55.0% | |
| TCTTGTTAACCGGTGCCCTC+AGG | + | chr7_4:38984915-38984934 | None:intergenic | 55.0% | |
| TTGTTAACCGGTGCCCTCAG+GGG | + | chr7_4:38984913-38984932 | None:intergenic | 55.0% | |
| CTTGTTAACCGGTGCCCTCA+GGG | + | chr7_4:38984914-38984933 | None:intergenic | 55.0% | |
| TCTTGTTAACCGGTGCCCTC+AGG | + | chr7_4:38984915-38984934 | None:intergenic | 55.0% | |
| ! | AGTGCCCCAAGGGCATGCAT+TGG | - | chr7_4:38984694-38984713 | Msa1152930:intron | 60.0% |
| ACCGGTACCCTCAGGGGTAA+TGG | + | chr7_4:38984787-38984806 | None:intergenic | 60.0% | |
| ! | ACCATTACCCCTGAGGGCAC+CGG | - | chr7_4:38984903-38984922 | Msa1152930:intron | 60.0% |
| ! | ACCATTACCCCTGAGGGCAC+CGG | - | chr7_4:38984903-38984922 | Msa1152930:intron | 60.0% |
| ! | AGTGCCCCAAGGGCATGCAT+TGG | - | chr7_4:38984694-38984713 | Msa1152930:intron | 60.0% |
| ACCGGTACCCTCAGGGGTAA+TGG | + | chr7_4:38984787-38984806 | None:intergenic | 60.0% | |
| ! | ACCATTACCCCTGAGGGCAC+CGG | - | chr7_4:38984903-38984922 | Msa1152930:intron | 60.0% |
| ! | ACCATTACCCCTGAGGGCAC+CGG | - | chr7_4:38984903-38984922 | Msa1152930:intron | 60.0% |
| ACCGGTGCCCTCAGGGGTAA+TGG | + | chr7_4:38984907-38984926 | None:intergenic | 65.0% | |
| ACCGGTGCCCTCAGGGGTAA+TGG | + | chr7_4:38984907-38984926 | None:intergenic | 65.0% | |
| ACCGGTGCCCTCAGGGGTAA+TGG | + | chr7_4:38984907-38984926 | None:intergenic | 65.0% | |
| ACCGGTGCCCTCAGGGGTAA+TGG | + | chr7_4:38984907-38984926 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 38983643 | 38985910 | 38983643 | ID=Msa1152930;Name=Msa1152930 |
| chr7_4 | mRNA | 38983643 | 38985910 | 38983643 | ID=Msa1152930-mRNA-1;Parent=Msa1152930;Name=Msa1152930-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.75|0.6|1|1|1|5|0|344 |
| chr7_4 | exon | 38985655 | 38985910 | 38985655 | ID=Msa1152930-mRNA-1:exon:9437;Parent=Msa1152930-mRNA-1 |
| chr7_4 | exon | 38985290 | 38985366 | 38985290 | ID=Msa1152930-mRNA-1:exon:9436;Parent=Msa1152930-mRNA-1 |
| chr7_4 | exon | 38985134 | 38985170 | 38985134 | ID=Msa1152930-mRNA-1:exon:9435;Parent=Msa1152930-mRNA-1 |
| chr7_4 | exon | 38984914 | 38985022 | 38984914 | ID=Msa1152930-mRNA-1:exon:9434;Parent=Msa1152930-mRNA-1 |
| chr7_4 | exon | 38983643 | 38984198 | 38983643 | ID=Msa1152930-mRNA-1:exon:9433;Parent=Msa1152930-mRNA-1 |
| chr7_4 | CDS | 38985655 | 38985910 | 38985655 | ID=Msa1152930-mRNA-1:cds;Parent=Msa1152930-mRNA-1 |
| chr7_4 | CDS | 38985290 | 38985366 | 38985290 | ID=Msa1152930-mRNA-1:cds;Parent=Msa1152930-mRNA-1 |
| chr7_4 | CDS | 38985134 | 38985170 | 38985134 | ID=Msa1152930-mRNA-1:cds;Parent=Msa1152930-mRNA-1 |
| chr7_4 | CDS | 38984914 | 38985022 | 38984914 | ID=Msa1152930-mRNA-1:cds;Parent=Msa1152930-mRNA-1 |
| chr7_4 | CDS | 38983643 | 38984198 | 38983643 | ID=Msa1152930-mRNA-1:cds;Parent=Msa1152930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
