AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1155060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155060 MtrunA17_Chr7g0246571 96.730 367 11 1 1 367 1 366 0.0 726
Msa1155060 MtrunA17_Chr4g0057351 54.133 375 157 6 1 366 1 369 3.07e-137 395
Msa1155060 MtrunA17_Chr5g0397921 57.185 341 131 5 39 366 47 385 2.62e-123 360
Msa1155060 MtrunA17_Chr8g0391751 48.955 335 160 5 29 361 8 333 1.82e-105 313
Msa1155060 MtrunA17_Chr1g0161291 49.521 313 150 4 51 361 41 347 2.29e-98 295
Msa1155060 MtrunA17_Chr7g0255261 38.721 297 140 6 73 362 34 295 2.30e-64 206
Msa1155060 MtrunA17_Chr1g0148631 35.873 315 167 9 68 357 81 385 2.07e-44 157
Msa1155060 MtrunA17_Chr3g0138451 33.225 307 163 9 79 357 69 361 3.76e-43 154
Msa1155060 MtrunA17_Chr7g0255321 38.776 196 107 4 175 361 100 291 1.76e-34 128
Msa1155060 MtrunA17_Chr5g0446921 31.502 273 142 7 93 354 97 335 1.04e-28 114
Msa1155060 MtrunA17_Chr7g0255331 34.848 198 112 3 175 361 104 295 1.32e-28 113
Msa1155060 MtrunA17_Chr3g0102761 28.519 270 159 7 90 354 88 328 3.17e-28 112
Msa1155060 MtrunA17_Chr3g0112041 38.776 98 57 2 261 355 158 255 1.91e-14 72.8
Msa1155060 MtrunA17_Chr5g0437361 41.558 77 42 2 279 354 71 145 6.10e-14 69.3
Msa1155060 MtrunA17_Chr8g0369691 57.895 57 22 2 309 363 440 496 5.67e-13 70.1
Msa1155060 MtrunA17_Chr3g0113811 55.102 49 21 1 307 354 100 148 1.53e-12 65.5
Msa1155060 MtrunA17_Chr5g0408871 55.556 54 23 1 309 361 501 554 1.58e-12 68.6
Msa1155060 MtrunA17_Chr8g0382811 49.153 59 27 1 306 361 61 119 7.22e-12 63.2
Msa1155060 MtrunA17_Chr4g0031911 35.514 107 66 1 254 357 147 253 8.41e-12 65.1
Msa1155060 MtrunA17_Chr4g0065171 51.667 60 21 3 310 361 480 539 1.30e-11 65.9
Msa1155060 MtrunA17_Chr4g0031921 34.579 107 67 1 254 357 147 253 6.73e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155060 AT3G61180.1 54.595 370 155 7 3 364 10 374 1.08e-136 394
Msa1155060 AT4G11680.1 55.978 368 137 8 14 367 34 390 2.88e-126 369
Msa1155060 AT1G12760.1 52.329 365 150 5 20 366 48 406 9.17e-120 352
Msa1155060 AT4G11680.2 51.889 397 137 9 14 367 34 419 1.11e-119 353
Msa1155060 AT1G63170.1 56.936 346 133 3 33 362 29 374 2.66e-119 350
Msa1155060 AT1G12760.2 53.134 335 139 3 50 366 1 335 7.34e-115 337
Msa1155060 AT1G68070.1 45.028 362 172 7 4 361 2 340 1.02e-101 304
Msa1155060 AT2G01735.1 47.937 315 147 5 51 359 50 353 4.08e-94 285
Msa1155060 AT2G01735.2 49.282 209 95 2 51 256 50 250 1.20e-60 196
Msa1155060 AT4G32600.1 32.895 304 170 8 79 357 113 407 1.30e-46 165
Msa1155060 AT4G32600.2 32.895 304 170 8 79 357 113 407 1.30e-46 165
Msa1155060 AT1G80400.1 31.353 303 175 6 79 357 106 399 1.75e-44 158
Msa1155060 AT4G26580.1 25.706 354 204 10 18 357 25 333 6.30e-29 115
Msa1155060 AT4G26580.2 25.706 354 204 10 18 357 25 333 6.30e-29 115
Msa1155060 AT5G55970.2 28.364 275 154 5 90 357 103 341 1.58e-28 114
Msa1155060 AT5G55970.1 28.364 275 154 5 90 357 103 341 1.58e-28 114
Msa1155060 AT4G09120.1 29.139 151 70 4 218 357 44 168 1.52e-13 71.2
Msa1155060 AT3G55530.1 36.275 102 64 1 255 355 152 253 4.39e-13 69.3
Msa1155060 AT4G09560.1 52.632 57 24 2 313 366 234 290 3.60e-11 64.7
Msa1155060 AT3G10910.1 47.273 55 28 1 305 358 106 160 6.37e-11 61.2

Find 119 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTCTTAGGTTGTGGATTT+TGG 0.071559 7_4:-42841307 Msa1155060:CDS
ATCATTCTAAACTTATATTT+TGG 0.169917 7_4:+42839171 None:intergenic
ATGAGTTGTGATGAATATTT+TGG 0.213907 7_4:+42841708 None:intergenic
GAAACAAATTGTTCCCTATA+TGG 0.217820 7_4:+42838252 None:intergenic
AGGATTCACCTCAGCTTTAC+TGG 0.263802 7_4:-42839734 Msa1155060:intron
GAAATTACATTTCTTGCTTA+AGG 0.267447 7_4:-42838166 Msa1155060:three_prime_UTR
CATTCATATGGTGGATTCTT+GGG 0.273975 7_4:-42839794 Msa1155060:CDS
GGTGGATTCTTGGGTTCTAC+TGG 0.283067 7_4:-42839785 Msa1155060:CDS
AAATTGGAGGTGAAATAAAA+TGG 0.284743 7_4:-42838408 Msa1155060:three_prime_UTR
TGTTGTTAGTGTTGTCGTTT+TGG 0.294850 7_4:-42841358 Msa1155060:CDS
AATAGTTCAAACTTCTTGAT+TGG 0.296027 7_4:+42838521 None:intergenic
AGGAACCGTGTGTGCCTCTT+AGG 0.317425 7_4:-42841320 Msa1155060:CDS
TAGAATGATAAAGGAATCTA+AGG 0.320923 7_4:-42839157 Msa1155060:CDS
ATAGTTCAAACTTCTTGATT+GGG 0.327329 7_4:+42838522 None:intergenic
CACTCCTCTGGATGATTCTT+GGG 0.330017 7_4:+42839122 None:intergenic
AGATGATGATGATTCTGTTT+TGG 0.335055 7_4:-42841205 Msa1155060:CDS
TCACTCCTCTGGATGATTCT+TGG 0.336453 7_4:+42839121 None:intergenic
TCATTCATATGGTGGATTCT+TGG 0.338482 7_4:-42839795 Msa1155060:CDS
GAAACTTACTGCATCTTCTA+AGG 0.363248 7_4:+42839056 None:intergenic
TCATTCGGTGTGTGTTGTTT+CGG 0.372544 7_4:-42841262 Msa1155060:CDS
TGGTTCGGTGTCGCCGGCGG+TGG 0.372922 7_4:+42841599 None:intergenic
CGGTTTCAACCAAACCATAT+AGG 0.374764 7_4:-42838266 Msa1155060:three_prime_UTR
AGCATGAGAGTGAGGAAAAT+AGG 0.377979 7_4:-42841128 Msa1155060:intron
TATATGGCAAATGAGTTAAC+AGG 0.391846 7_4:-42838067 Msa1155060:three_prime_UTR
CGATGCATGTACAATGAAAA+TGG 0.393238 7_4:+42838610 None:intergenic
TTTGTATGCAGTGGCTGATC+AGG 0.395991 7_4:-42839508 Msa1155060:intron
AAGGAGAAGGGGTAATCATT+TGG 0.397806 7_4:-42841229 Msa1155060:CDS
GGTTTCAACCAAACCATATA+GGG 0.399972 7_4:-42838265 Msa1155060:three_prime_UTR
ATATAAGTTTAGAATGATAA+AGG 0.400086 7_4:-42839166 Msa1155060:CDS
GTTGCTGTTGCATGTCTCAT+TGG 0.406532 7_4:-42839570 Msa1155060:CDS
GGGTTACTTGTTGCAGGGGT+TGG 0.406648 7_4:-42841286 Msa1155060:CDS
TGCCTTTCTGCCTATGATGA+TGG 0.409942 7_4:-42838663 Msa1155060:CDS
AAATTGTTCCCTATATGGTT+TGG 0.412620 7_4:+42838257 None:intergenic
GTTGCAGGGGTTGGTTCATT+CGG 0.419819 7_4:-42841277 Msa1155060:CDS
AGCTGGCGTGACGGAAGAAA+TGG 0.426808 7_4:+42841517 None:intergenic
GCCTTTCTGCCTATGATGAT+GGG 0.437791 7_4:-42838662 Msa1155060:CDS
TGGGTGGCGGTGCGGAGTGG+TGG 0.438767 7_4:+42841537 None:intergenic
AAGTTCATCCCCATCATCAT+AGG 0.439491 7_4:+42838653 None:intergenic
ATACTGTAAAATAAAACAAT+AGG 0.447224 7_4:+42838138 None:intergenic
AATATGAGATTGTTGTGAAA+AGG 0.447388 7_4:+42838468 None:intergenic
AGGGAACAATTTGTTTCCAT+TGG 0.448428 7_4:-42838246 Msa1155060:three_prime_UTR
TAGAAAACCGGCAGAGAGAG+TGG 0.450579 7_4:-42841434 Msa1155060:CDS
GGAATTTAGAAGAAGGAGAA+GGG 0.457083 7_4:-42841241 Msa1155060:CDS
ATTGTACATGCATCGACAAA+TGG 0.457199 7_4:-42838602 Msa1155060:CDS
TAAAGGAATCTAAGGAAGAA+GGG 0.460524 7_4:-42839149 Msa1155060:CDS
GAGGAATGGTTCGGTGTCGC+CGG 0.464396 7_4:+42841593 None:intergenic
ATACCATTCTATCATTCATA+TGG 0.466212 7_4:-42839806 Msa1155060:CDS
ATCATCCAGAGGAGTGATGA+TGG 0.468538 7_4:-42839115 Msa1155060:CDS
ACATTCCATCATCACTCCTC+TGG 0.470831 7_4:+42839110 None:intergenic
CGGAATTTAGAAGAAGGAGA+AGG 0.471716 7_4:-42841242 Msa1155060:CDS
ATAAAGGAATCTAAGGAAGA+AGG 0.474243 7_4:-42839150 Msa1155060:CDS
CGGAGAGTGCGGCGGAGGAA+TGG 0.476571 7_4:+42841579 None:intergenic
ATATGAGATTGTTGTGAAAA+GGG 0.478602 7_4:+42838469 None:intergenic
TGCGGCGGAGAGTGCGGCGG+AGG 0.482239 7_4:+42841574 None:intergenic
CCCAAAATCCACAACCTAAG+AGG 0.485492 7_4:+42841306 None:intergenic
CGCTATATCAAGTGCTACAA+CGG 0.486749 7_4:+42841398 None:intergenic
CCACCATATGAATGATAGAA+TGG 0.504409 7_4:+42839803 None:intergenic
GAGCATCATGCGATGTGAGC+TGG 0.505000 7_4:+42841500 None:intergenic
TGCGGAGTGGTGGTGTGTGG+TGG 0.507350 7_4:+42841547 None:intergenic
GAGTGGTGGTGTGTGGTGGA+TGG 0.508063 7_4:+42841551 None:intergenic
GTCAAATTTGCAGAGAGGGC+AGG 0.508739 7_4:+42838563 None:intergenic
AATGAGTTAACAGGTGTTGT+GGG 0.511185 7_4:-42838058 None:intergenic
GTGGATTCTTGGGTTCTACT+GGG 0.512537 7_4:-42839784 Msa1155060:CDS
TTGTTTCGGAATTTAGAAGA+AGG 0.513254 7_4:-42841248 Msa1155060:CDS
CAACTGATCAATCTCTTCCA+TGG 0.515755 7_4:+42839194 None:intergenic
CAGCAACGGAGGTAGAAAAC+CGG 0.516009 7_4:-42841446 Msa1155060:CDS
GTGTGTGGTGGATGGTGCGG+CGG 0.517333 7_4:+42841559 None:intergenic
CCCCATCATCATAGGCAGAA+AGG 0.517479 7_4:+42838661 None:intergenic
CGGTGCGGAGTGGTGGTGTG+TGG 0.523611 7_4:+42841544 None:intergenic
AATAAGCCCACTCTCTCTGC+CGG 0.525420 7_4:+42841427 None:intergenic
CCATTCTATCATTCATATGG+TGG 0.534282 7_4:-42839803 Msa1155060:CDS
TACAAAATAGCAAGTATGCA+TGG 0.536121 7_4:+42839525 None:intergenic
GGATGGTGCGGCGGAGAGTG+CGG 0.537793 7_4:+42841568 None:intergenic
GGGTTCTACTGGGTAACTGT+AGG 0.540359 7_4:-42839774 Msa1155060:CDS
GCTATATCAAGTGCTACAAC+GGG 0.540999 7_4:+42841399 None:intergenic
GTGGTGTGTGGTGGATGGTG+CGG 0.546396 7_4:+42841556 None:intergenic
AAATGTCAAATTTGCAGAGA+GGG 0.546411 7_4:+42838559 None:intergenic
AGTGCGGCGGAGGAATGGTT+CGG 0.550111 7_4:+42841584 None:intergenic
ATTTACTTGTTGCATTGACT+AGG 0.555693 7_4:-42838501 Msa1155060:three_prime_UTR
GAATGGTTCGGTGTCGCCGG+CGG 0.558327 7_4:+42841596 None:intergenic
AAATGGGTGGCGGTGCGGAG+TGG 0.561435 7_4:+42841534 None:intergenic
TAGTTCAAACTTCTTGATTG+GGG 0.561948 7_4:+42838523 None:intergenic
TTCTACTGGGTAACTGTAGG+TGG 0.562552 7_4:-42839771 Msa1155060:CDS
CTGTAAAATAAAACAATAGG+TGG 0.564598 7_4:+42838141 None:intergenic
CTCTCTCGTACACGGACTGA+TGG 0.565171 7_4:+42841471 None:intergenic
TTGCTGCTCTCTCTCGTACA+CGG 0.571405 7_4:+42841463 None:intergenic
TGGTGCGGCGGAGAGTGCGG+CGG 0.573001 7_4:+42841571 None:intergenic
TGCTTCTGAGCATGAGAGTG+AGG 0.574400 7_4:-42841136 Msa1155060:CDS
GTTGCAACAGGGAGCAACCA+TGG 0.575202 7_4:-42839211 Msa1155060:intron
CCTTTCTGCCTATGATGATG+GGG 0.577985 7_4:-42838661 Msa1155060:CDS
CCAACTCTTGATTCCACCGC+CGG 0.581351 7_4:-42841612 Msa1155060:CDS
TGTACGAGAGAGAGCAGCAA+CGG 0.582872 7_4:-42841460 Msa1155060:CDS
ACTTGTTGCATTGACTAGGT+CGG 0.585284 7_4:-42838497 Msa1155060:three_prime_UTR
CGTGTGTGCCTCTTAGGTTG+TGG 0.586299 7_4:-42841314 Msa1155060:CDS
AAATGAGTTAACAGGTGTTG+TGG 0.587836 7_4:-42838059 None:intergenic
CAATGAAAATGGTGGTTGCA+AGG 0.595758 7_4:+42838621 None:intergenic
AAAGGAATCTAAGGAAGAAG+GGG 0.596666 7_4:-42839148 Msa1155060:CDS
AAGTTATGAGCTAAAGTGAA+AGG 0.596976 7_4:+42838203 None:intergenic
CCGGCGGTGGAATCAAGAGT+TGG 0.597585 7_4:+42841612 None:intergenic
TTTGGGGTTGAGTAGTGAAG+AGG 0.598216 7_4:-42841340 Msa1155060:CDS
AAATTCTTCATATATACCAA+TGG 0.600971 7_4:+42838230 None:intergenic
ATTGTGTTGTCTATAATCAG+CGG 0.603433 7_4:-42838286 Msa1155060:three_prime_UTR
GCTGGCGTGACGGAAGAAAT+GGG 0.609208 7_4:+42841518 None:intergenic
GTACACGGACTGATGGTTCG+CGG 0.614957 7_4:+42841478 None:intergenic
CACAACCTAAGAGGCACACA+CGG 0.615339 7_4:+42841315 None:intergenic
GAATTTAGAAGAAGGAGAAG+GGG 0.618972 7_4:-42841240 Msa1155060:CDS
GTGACGGAAGAAATGGGTGG+CGG 0.623989 7_4:+42841524 None:intergenic
AGAAAACCGGCAGAGAGAGT+GGG 0.626051 7_4:-42841433 Msa1155060:CDS
TTGTAGCACTTGATATAGCG+TGG 0.627128 7_4:-42841395 Msa1155060:CDS
GGAAGAAATGGGTGGCGGTG+CGG 0.627635 7_4:+42841529 None:intergenic
ACGAGAGAGAGCAGCAACGG+AGG 0.636128 7_4:-42841457 Msa1155060:CDS
GCGTCTATAACATTTAGCGA+TGG 0.639258 7_4:+42838369 None:intergenic
GTAACTAACCAGTAAAGCTG+AGG 0.656097 7_4:+42839726 None:intergenic
AGGTGGTCAGAGTTTGACAA+AGG 0.661788 7_4:-42839754 Msa1155060:CDS
AAAATGTCAAATTTGCAGAG+AGG 0.690069 7_4:+42838558 None:intergenic
AGTATATCTCTTAAATGACA+AGG 0.696596 7_4:-42838120 Msa1155060:three_prime_UTR
GATGCCCAAGAATCATCCAG+AGG 0.736665 7_4:-42839126 Msa1155060:CDS
GGCGTGACGGAAGAAATGGG+TGG 0.750782 7_4:+42841521 None:intergenic
TGCATGTACAATGAAAATGG+TGG 0.793998 7_4:+42838613 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAAAAAAAAAAAAA+TGG - chr7_4:42838122-42838141 Msa1155060:three_prime_UTR 0.0%
!!! TTTCACATATTTTTTACTAT+AGG + chr7_4:42838889-42838908 None:intergenic 15.0%
!! GTAAAAAATATGTGAAAAAT+AGG - chr7_4:42838892-42838911 Msa1155060:intron 15.0%
!! ATCAAAATCAAACTTAAATT+TGG - chr7_4:42839335-42839354 Msa1155060:intron 15.0%
!! AAAAATAAGAACAATGAATT+TGG - chr7_4:42840360-42840379 Msa1155060:intron 15.0%
!!! ATCATTCTAAACTTATATTT+TGG + chr7_4:42840600-42840619 None:intergenic 15.0%
!!! ATATAAGTTTAGAATGATAA+AGG - chr7_4:42840602-42840621 Msa1155060:intron 15.0%
!!! AAGTTTCTAGTTATTAAATT+TGG - chr7_4:42840728-42840747 Msa1155060:intron 15.0%
!!! AATGTAAATTACAGTATTTT+TGG - chr7_4:42840986-42841005 Msa1155060:intron 15.0%
!!! TTACTTGTTTTTACATTTAA+TGG - chr7_4:42841047-42841066 Msa1155060:intron 15.0%
!! ATACTGTAAAATAAAACAAT+AGG + chr7_4:42841633-42841652 None:intergenic 15.0%
!! AAACTATAAGAGAAACTATT+TGG - chr7_4:42839020-42839039 Msa1155060:intron 20.0%
!!! CTGTATTTAACTTTGTATTT+TGG - chr7_4:42839871-42839890 Msa1155060:intron 20.0%
!! ATACGACAAACAATAAAATA+AGG + chr7_4:42840298-42840317 None:intergenic 20.0%
!!! TATTTTATTGTTTGTCGTAT+AGG - chr7_4:42840298-42840317 Msa1155060:intron 20.0%
!!! AGATTTAACTTTTGTTCTAA+AGG - chr7_4:42841013-42841032 Msa1155060:intron 20.0%
!! AAATTCTTCATATATACCAA+TGG + chr7_4:42841541-42841560 None:intergenic 20.0%
!!! GAAAAATATGTTGCTTTATA+TGG - chr7_4:42841685-42841704 Msa1155060:five_prime_UTR 20.0%
!! ATGAGTTGTGATGAATATTT+TGG + chr7_4:42838063-42838082 None:intergenic 25.0%
!! AACTATTTGGAAAGATTTTG+AGG - chr7_4:42839033-42839052 Msa1155060:intron 25.0%
! GTTCTATCATAAACCATATT+TGG + chr7_4:42839073-42839092 None:intergenic 25.0%
! AAATTGCAAATAAAAGAACG+TGG - chr7_4:42839292-42839311 Msa1155060:intron 25.0%
! TACACATGATTGAATTACAA+TGG - chr7_4:42839709-42839728 Msa1155060:intron 25.0%
! AATTATGAACAGAATTCAGT+AGG + chr7_4:42839817-42839836 None:intergenic 25.0%
!! ATAATTCAGAGTATCTTGTT+TGG - chr7_4:42839831-42839850 Msa1155060:CDS 25.0%
! AAGTTTGTAACCTGTATTAT+TGG - chr7_4:42839901-42839920 Msa1155060:intron 25.0%
! ATACCATTCTATCATTCATA+TGG - chr7_4:42839962-42839981 Msa1155060:intron 25.0%
! TAGAATGATAAAGGAATCTA+AGG - chr7_4:42840611-42840630 Msa1155060:intron 25.0%
!! CTATTTAGATATGATTTTGC+AGG + chr7_4:42840953-42840972 None:intergenic 25.0%
! ATCATATCTAAATAGTGACA+TGG - chr7_4:42840958-42840977 Msa1155060:intron 25.0%
!!! AACTTTTGTTCTAAAGGTTT+AGG - chr7_4:42841019-42841038 Msa1155060:intron 25.0%
! ATAGTTCAAACTTCTTGATT+GGG + chr7_4:42841249-42841268 None:intergenic 25.0%
! AATAGTTCAAACTTCTTGAT+TGG + chr7_4:42841250-42841269 None:intergenic 25.0%
! ATATGAGATTGTTGTGAAAA+GGG + chr7_4:42841302-42841321 None:intergenic 25.0%
! AATATGAGATTGTTGTGAAA+AGG + chr7_4:42841303-42841322 None:intergenic 25.0%
! AAATTGGAGGTGAAATAAAA+TGG - chr7_4:42841360-42841379 Msa1155060:CDS 25.0%
! GAAATTACATTTCTTGCTTA+AGG - chr7_4:42841602-42841621 Msa1155060:CDS 25.0%
! CTGTAAAATAAAACAATAGG+TGG + chr7_4:42841630-42841649 None:intergenic 25.0%
! AGTATATCTCTTAAATGACA+AGG - chr7_4:42841648-42841667 Msa1155060:exon 25.0%
TTGTTTCGGAATTTAGAAGA+AGG - chr7_4:42838520-42838539 Msa1155060:exon 30.0%
!! AGATGATGATGATTCTGTTT+TGG - chr7_4:42838563-42838582 Msa1155060:CDS 30.0%
TATGTGAAAAATAGGCTTAG+TGG - chr7_4:42838900-42838919 Msa1155060:intron 30.0%
!!! TGGAAAGATTTTGAGGTTAA+TGG - chr7_4:42839040-42839059 Msa1155060:intron 30.0%
!!! GGAAAGATTTTGAGGTTAAT+GGG - chr7_4:42839041-42839060 Msa1155060:intron 30.0%
TTCGAGAAAAACATATAGAC+AGG + chr7_4:42839229-42839248 None:intergenic 30.0%
! TGTAACTTTTGCCATGATTA+AGG + chr7_4:42839268-42839287 None:intergenic 30.0%
TTATGATTGAGATAGTGACA+TGG + chr7_4:42839393-42839412 None:intergenic 30.0%
ATGTCACTATCTCAATCATA+AGG - chr7_4:42839392-42839411 Msa1155060:intron 30.0%
AAACTTTAGGTAGAAGTTCA+AGG + chr7_4:42839428-42839447 None:intergenic 30.0%
TAGGTGTTAAAATTAGAGCA+AGG + chr7_4:42839634-42839653 None:intergenic 30.0%
!! ATATGTGAGAAGTGTTATTC+TGG - chr7_4:42839684-42839703 Msa1155060:intron 30.0%
ACATGATTGAATTACAATGG+AGG - chr7_4:42839712-42839731 Msa1155060:intron 30.0%
TACAGGTTACAAACTTGATA+AGG + chr7_4:42839897-42839916 None:intergenic 30.0%
GATAGTTCAACCAATAATAC+AGG + chr7_4:42839914-42839933 None:intergenic 30.0%
AAAATTGCAAGGAAGAAACA+TGG + chr7_4:42840100-42840119 None:intergenic 30.0%
TACAAAATAGCAAGTATGCA+TGG + chr7_4:42840246-42840265 None:intergenic 30.0%
ATAAAGGAATCTAAGGAAGA+AGG - chr7_4:42840618-42840637 Msa1155060:intron 30.0%
TAAAGGAATCTAAGGAAGAA+GGG - chr7_4:42840619-42840638 Msa1155060:intron 30.0%
TCTTACAACTATTCCATGTT+TGG - chr7_4:42840802-42840821 Msa1155060:intron 30.0%
! TGATTTTGCAGGTGTTAAAT+AGG + chr7_4:42840942-42840961 None:intergenic 30.0%
! CATTTAATGGATCTGATTGA+TGG - chr7_4:42841060-42841079 Msa1155060:intron 30.0%
AAATGTCAAATTTGCAGAGA+GGG + chr7_4:42841212-42841231 None:intergenic 30.0%
AAAATGTCAAATTTGCAGAG+AGG + chr7_4:42841213-42841232 None:intergenic 30.0%
TAGTTCAAACTTCTTGATTG+GGG + chr7_4:42841248-42841267 None:intergenic 30.0%
!! ATTTACTTGTTGCATTGACT+AGG - chr7_4:42841267-42841286 Msa1155060:CDS 30.0%
ATTGTGTTGTCTATAATCAG+CGG - chr7_4:42841482-42841501 Msa1155060:CDS 30.0%
AAATTGTTCCCTATATGGTT+TGG + chr7_4:42841514-42841533 None:intergenic 30.0%
GAAACAAATTGTTCCCTATA+TGG + chr7_4:42841519-42841538 None:intergenic 30.0%
AAGTTATGAGCTAAAGTGAA+AGG + chr7_4:42841568-42841587 None:intergenic 30.0%
TATATGGCAAATGAGTTAAC+AGG - chr7_4:42841701-42841720 Msa1155060:five_prime_UTR 30.0%
!! TGTTGTTAGTGTTGTCGTTT+TGG - chr7_4:42838410-42838429 Msa1155060:three_prime_UTR 35.0%
!!! GTTGTTAGTGTTGTCGTTTT+GGG - chr7_4:42838411-42838430 Msa1155060:three_prime_UTR 35.0%
!!! TTGTTAGTGTTGTCGTTTTG+GGG - chr7_4:42838412-42838431 Msa1155060:three_prime_UTR 35.0%
!!! ATTTTGGGTTACTTGTTGCA+GGG - chr7_4:42838477-42838496 Msa1155060:three_prime_UTR 35.0%
GGAATTTAGAAGAAGGAGAA+GGG - chr7_4:42838527-42838546 Msa1155060:CDS 35.0%
GAATTTAGAAGAAGGAGAAG+GGG - chr7_4:42838528-42838547 Msa1155060:CDS 35.0%
ACATTAGTTAGAGAGAGAGT+TGG - chr7_4:42838856-42838875 Msa1155060:intron 35.0%
CATTAGTTAGAGAGAGAGTT+GGG - chr7_4:42838857-42838876 Msa1155060:intron 35.0%
ATTAGTTAGAGAGAGAGTTG+GGG - chr7_4:42838858-42838877 Msa1155060:intron 35.0%
GAAAAATAGGCTTAGTGGTT+TGG - chr7_4:42838905-42838924 Msa1155060:intron 35.0%
! GACCTGTTGATTATGTAGTA+AGG - chr7_4:42838942-42838961 Msa1155060:intron 35.0%
CTCCTTACTACATAATCAAC+AGG + chr7_4:42838947-42838966 None:intergenic 35.0%
GAGGATAGTTATATTACACG+AGG - chr7_4:42838980-42838999 Msa1155060:intron 35.0%
AGTTATATTACACGAGGTAG+AGG - chr7_4:42838986-42839005 Msa1155060:intron 35.0%
!!! AGATTTTGAGGTTAATGGGT+TGG - chr7_4:42839045-42839064 Msa1155060:intron 35.0%
AAGAAGTGAAGTAATGTGCA+CGG + chr7_4:42839558-42839577 None:intergenic 35.0%
! AGAGTATCTTGTTTGGAATG+TGG - chr7_4:42839838-42839857 Msa1155060:intron 35.0%
CCACCATATGAATGATAGAA+TGG + chr7_4:42839968-42839987 None:intergenic 35.0%
CCATTCTATCATTCATATGG+TGG - chr7_4:42839965-42839984 Msa1155060:intron 35.0%
!! TCATTCATATGGTGGATTCT+TGG - chr7_4:42839973-42839992 Msa1155060:intron 35.0%
!! CATTCATATGGTGGATTCTT+GGG - chr7_4:42839974-42839993 Msa1155060:intron 35.0%
ACGATGGTTACAAAATTGCA+AGG + chr7_4:42840111-42840130 None:intergenic 35.0%
!!! ACTTGCTATTTTGTATGCAG+TGG - chr7_4:42840251-42840270 Msa1155060:intron 35.0%
TCAGTAGAGTTAGTCAAAAC+CGG - chr7_4:42840405-42840424 Msa1155060:intron 35.0%
! AAAACCGGTTCAGTTTCAAT+AGG - chr7_4:42840420-42840439 Msa1155060:intron 35.0%
! AAACCGGTTCAGTTTCAATA+GGG - chr7_4:42840421-42840440 Msa1155060:intron 35.0%
AGACTGATAAATGCGAGAAA+TGG + chr7_4:42840502-42840521 None:intergenic 35.0%
AAAGGAATCTAAGGAAGAAG+GGG - chr7_4:42840620-42840639 Msa1155060:intron 35.0%
GAAACTTACTGCATCTTCTA+AGG + chr7_4:42840715-42840734 None:intergenic 35.0%
AAACATGGAATAAACCAGCA+AGG + chr7_4:42840869-42840888 None:intergenic 35.0%
!! TTGCTGGTTTATTCCATGTT+TGG - chr7_4:42840868-42840887 Msa1155060:intron 35.0%
! TAAGTTTTCATAAGCCAGCA+AGG + chr7_4:42840902-42840921 None:intergenic 35.0%
TGCATGTACAATGAAAATGG+TGG + chr7_4:42841158-42841177 None:intergenic 35.0%
CGATGCATGTACAATGAAAA+TGG + chr7_4:42841161-42841180 None:intergenic 35.0%
! ATTGTACATGCATCGACAAA+TGG - chr7_4:42841166-42841185 Msa1155060:CDS 35.0%
GGTTTCAACCAAACCATATA+GGG - chr7_4:42841503-42841522 Msa1155060:CDS 35.0%
! AGGGAACAATTTGTTTCCAT+TGG - chr7_4:42841522-42841541 Msa1155060:CDS 35.0%
GCTATATCAAGTGCTACAAC+GGG + chr7_4:42838372-42838391 None:intergenic 40.0%
CGCTATATCAAGTGCTACAA+CGG + chr7_4:42838373-42838392 None:intergenic 40.0%
TTGTAGCACTTGATATAGCG+TGG - chr7_4:42838373-42838392 Msa1155060:three_prime_UTR 40.0%
!! CCTCTTAGGTTGTGGATTTT+GGG - chr7_4:42838462-42838481 Msa1155060:three_prime_UTR 40.0%
!!! GATTTTGGGTTACTTGTTGC+AGG - chr7_4:42838476-42838495 Msa1155060:three_prime_UTR 40.0%
!!! TTTTGGGTTACTTGTTGCAG+GGG - chr7_4:42838478-42838497 Msa1155060:three_prime_UTR 40.0%
!! TCATTCGGTGTGTGTTGTTT+CGG - chr7_4:42838506-42838525 Msa1155060:three_prime_UTR 40.0%
CGGAATTTAGAAGAAGGAGA+AGG - chr7_4:42838526-42838545 Msa1155060:exon 40.0%
AAGGAGAAGGGGTAATCATT+TGG - chr7_4:42838539-42838558 Msa1155060:CDS 40.0%
!!! GATGATTCTGTTTTGGAGAG+TGG - chr7_4:42838570-42838589 Msa1155060:CDS 40.0%
!!! CTGTTTTGGAGAGTGGTTTA+CGG - chr7_4:42838577-42838596 Msa1155060:CDS 40.0%
AGCATGAGAGTGAGGAAAAT+AGG - chr7_4:42838640-42838659 Msa1155060:CDS 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr7_4:42838958-42838977 Msa1155060:intron 40.0%
!! TAATGGGTTGGAGCCAAATA+TGG - chr7_4:42839057-42839076 Msa1155060:intron 40.0%
TCTCGAATGTAGACCTTAGT+TGG - chr7_4:42839242-42839261 Msa1155060:intron 40.0%
!! ACCTTAGTTGGCCTTAATCA+TGG - chr7_4:42839254-42839273 Msa1155060:intron 40.0%
CTATCTCAATCATAAGGACG+TGG - chr7_4:42839398-42839417 Msa1155060:intron 40.0%
CAACTGACACTGCAAACTTT+AGG + chr7_4:42839441-42839460 None:intergenic 40.0%
!! AACGATTGTCAAGCATCGAT+CGG - chr7_4:42839475-42839494 Msa1155060:intron 40.0%
AGCAAGGTAAGCAGAAAACA+AGG + chr7_4:42839618-42839637 None:intergenic 40.0%
TTAACACCTATCTTTGTGCG+AGG - chr7_4:42839644-42839663 Msa1155060:intron 40.0%
ACACTTCTCACATATCACCA+CGG + chr7_4:42839679-42839698 None:intergenic 40.0%
GTAACTAACCAGTAAAGCTG+AGG + chr7_4:42840045-42840064 None:intergenic 40.0%
AGTTTCAATAGGGCTGATGA+AGG - chr7_4:42840431-42840450 Msa1155060:intron 40.0%
GTTTCAATAGGGCTGATGAA+GGG - chr7_4:42840432-42840451 Msa1155060:intron 40.0%
TTTCAATAGGGCTGATGAAG+GGG - chr7_4:42840433-42840452 Msa1155060:intron 40.0%
TTGACCTCAAATGTTGCAAC+AGG - chr7_4:42840545-42840564 Msa1155060:intron 40.0%
TGACCTCAAATGTTGCAACA+GGG - chr7_4:42840546-42840565 Msa1155060:intron 40.0%
CAACTGATCAATCTCTTCCA+TGG + chr7_4:42840577-42840596 None:intergenic 40.0%
AAACATGGAATAAGCCAGCA+AGG + chr7_4:42840836-42840855 None:intergenic 40.0%
! CAAGGCTTTAGCACAAAACA+TGG + chr7_4:42840851-42840870 None:intergenic 40.0%
!! TCTGATTGATGGTGAATTCC+AGG - chr7_4:42841071-42841090 Msa1155060:intron 40.0%
AAGTTCATCCCCATCATCAT+AGG + chr7_4:42841118-42841137 None:intergenic 40.0%
CAATGAAAATGGTGGTTGCA+AGG + chr7_4:42841150-42841169 None:intergenic 40.0%
!! ACTTGTTGCATTGACTAGGT+CGG - chr7_4:42841271-42841290 Msa1155060:CDS 40.0%
! CCAATTTTTGTCAGTGACTC+TGG + chr7_4:42841347-42841366 None:intergenic 40.0%
CCAGAGTCACTGACAAAAAT+TGG - chr7_4:42841344-42841363 Msa1155060:CDS 40.0%
GAGTCACTGACAAAAATTGG+AGG - chr7_4:42841347-42841366 Msa1155060:CDS 40.0%
GCGTCTATAACATTTAGCGA+TGG + chr7_4:42841402-42841421 None:intergenic 40.0%
CGGTTTCAACCAAACCATAT+AGG - chr7_4:42841502-42841521 Msa1155060:CDS 40.0%
! TTTGGGGTTGAGTAGTGAAG+AGG - chr7_4:42838428-42838447 Msa1155060:three_prime_UTR 45.0%
!! GCCTCTTAGGTTGTGGATTT+TGG - chr7_4:42838461-42838480 Msa1155060:three_prime_UTR 45.0%
CCCAAAATCCACAACCTAAG+AGG + chr7_4:42838465-42838484 None:intergenic 45.0%
!! TTTTGGAGAGTGGTTTACGG+TGG - chr7_4:42838580-42838599 Msa1155060:CDS 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr7_4:42838961-42838980 Msa1155060:intron 45.0%
GCCATGATTAAGGCCAACTA+AGG + chr7_4:42839258-42839277 None:intergenic 45.0%
ATGAGACACATCTTTACGCG+AGG - chr7_4:42839513-42839532 Msa1155060:CDS 45.0%
CAGCTCTATACGAGTAGTGA+TGG + chr7_4:42839589-42839608 None:intergenic 45.0%
CATCACTACTCGTATAGAGC+TGG - chr7_4:42839587-42839606 Msa1155060:CDS 45.0%
GTGGATTCTTGGGTTCTACT+GGG - chr7_4:42839984-42840003 Msa1155060:intron 45.0%
TTCTACTGGGTAACTGTAGG+TGG - chr7_4:42839997-42840016 Msa1155060:intron 45.0%
AGGTGGTCAGAGTTTGACAA+AGG - chr7_4:42840014-42840033 Msa1155060:intron 45.0%
AGGATTCACCTCAGCTTTAC+TGG - chr7_4:42840034-42840053 Msa1155060:intron 45.0%
GCAAAACACAACATGCACGA+TGG + chr7_4:42840127-42840146 None:intergenic 45.0%
! TCGTGCATGTTGTGTTTTGC+AGG - chr7_4:42840127-42840146 Msa1155060:intron 45.0%
! GTTGCTGTTGCATGTCTCAT+TGG - chr7_4:42840198-42840217 Msa1155060:intron 45.0%
TTTGTATGCAGTGGCTGATC+AGG - chr7_4:42840260-42840279 Msa1155060:intron 45.0%
CAGCCCTATTGAAACTGAAC+CGG + chr7_4:42840427-42840446 None:intergenic 45.0%
CACTCCTCTGGATGATTCTT+GGG + chr7_4:42840649-42840668 None:intergenic 45.0%
TCACTCCTCTGGATGATTCT+TGG + chr7_4:42840650-42840669 None:intergenic 45.0%
ATCATCCAGAGGAGTGATGA+TGG - chr7_4:42840653-42840672 Msa1155060:intron 45.0%
ACATTCCATCATCACTCCTC+TGG + chr7_4:42840661-42840680 None:intergenic 45.0%
! CAAGGCTTTAGCACCAAACA+TGG + chr7_4:42840818-42840837 None:intergenic 45.0%
! GTTTTGTGCTAAAGCCTTGC+TGG - chr7_4:42840852-42840871 Msa1155060:intron 45.0%
! CAAGGCTTTAGCACCAAACA+TGG + chr7_4:42840818-42840837 None:intergenic 45.0%
AAAGGCAGATACAGCATTCC+TGG + chr7_4:42841092-42841111 None:intergenic 45.0%
TGCCTTTCTGCCTATGATGA+TGG - chr7_4:42841105-42841124 Msa1155060:intron 45.0%
GCCTTTCTGCCTATGATGAT+GGG - chr7_4:42841106-42841125 Msa1155060:intron 45.0%
! CCTTTCTGCCTATGATGATG+GGG - chr7_4:42841107-42841126 Msa1155060:intron 45.0%
TTGCTGCTCTCTCTCGTACA+CGG + chr7_4:42838308-42838327 None:intergenic 50.0%
TGTACGAGAGAGAGCAGCAA+CGG - chr7_4:42838308-42838327 Msa1155060:three_prime_UTR 50.0%
CAGCAACGGAGGTAGAAAAC+CGG - chr7_4:42838322-42838341 Msa1155060:three_prime_UTR 50.0%
TAGAAAACCGGCAGAGAGAG+TGG - chr7_4:42838334-42838353 Msa1155060:three_prime_UTR 50.0%
AGAAAACCGGCAGAGAGAGT+GGG - chr7_4:42838335-42838354 Msa1155060:three_prime_UTR 50.0%
AATAAGCCCACTCTCTCTGC+CGG + chr7_4:42838344-42838363 None:intergenic 50.0%
! CACAACCTAAGAGGCACACA+CGG + chr7_4:42838456-42838475 None:intergenic 50.0%
!! GTTGCAGGGGTTGGTTCATT+CGG - chr7_4:42838491-42838510 Msa1155060:three_prime_UTR 50.0%
TGCTTCTGAGCATGAGAGTG+AGG - chr7_4:42838632-42838651 Msa1155060:CDS 50.0%
CTACTAGCGTAGCTGAGATG+AGG - chr7_4:42838798-42838817 Msa1155060:intron 50.0%
! AAGCCTTATCCCACTAAGCG+GGG + chr7_4:42839131-42839150 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG + chr7_4:42839132-42839151 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + chr7_4:42839133-42839152 None:intergenic 50.0%
ACAGCTCCTCGCACAAAGAT+AGG + chr7_4:42839653-42839672 None:intergenic 50.0%
! GGTGGATTCTTGGGTTCTAC+TGG - chr7_4:42839983-42840002 Msa1155060:intron 50.0%
GGGTTCTACTGGGTAACTGT+AGG - chr7_4:42839994-42840013 Msa1155060:intron 50.0%
GCTCCCTGTTGCAACATTTG+AGG + chr7_4:42840552-42840571 None:intergenic 50.0%
GATGCCCAAGAATCATCCAG+AGG - chr7_4:42840642-42840661 Msa1155060:intron 50.0%
!! GTTTGGTGCTAAAGCCTTGC+TGG - chr7_4:42840819-42840838 Msa1155060:intron 50.0%
!! GTTTGGTGCTAAAGCCTTGC+TGG - chr7_4:42840819-42840838 Msa1155060:intron 50.0%
CCCCATCATCATAGGCAGAA+AGG + chr7_4:42841110-42841129 None:intergenic 50.0%
GTCAAATTTGCAGAGAGGGC+AGG + chr7_4:42841208-42841227 None:intergenic 50.0%
CCAACTCTTGATTCCACCGC+CGG - chr7_4:42838156-42838175 Msa1155060:three_prime_UTR 55.0%
! GTGACGGAAGAAATGGGTGG+CGG + chr7_4:42838247-42838266 None:intergenic 55.0%
! GCTGGCGTGACGGAAGAAAT+GGG + chr7_4:42838253-42838272 None:intergenic 55.0%
! AGCTGGCGTGACGGAAGAAA+TGG + chr7_4:42838254-42838273 None:intergenic 55.0%
GAGCATCATGCGATGTGAGC+TGG + chr7_4:42838271-42838290 None:intergenic 55.0%
! GTACACGGACTGATGGTTCG+CGG + chr7_4:42838293-42838312 None:intergenic 55.0%
! CTCTCTCGTACACGGACTGA+TGG + chr7_4:42838300-42838319 None:intergenic 55.0%
AGGAACCGTGTGTGCCTCTT+AGG - chr7_4:42838448-42838467 Msa1155060:three_prime_UTR 55.0%
! CGTGTGTGCCTCTTAGGTTG+TGG - chr7_4:42838454-42838473 Msa1155060:three_prime_UTR 55.0%
! GGGTTACTTGTTGCAGGGGT+TGG - chr7_4:42838482-42838501 Msa1155060:three_prime_UTR 55.0%
ACTAAGCGGGGTCAGCTACA+TGG + chr7_4:42839119-42839138 None:intergenic 55.0%
ATGTAGCTGACCCCGCTTAG+TGG - chr7_4:42839118-42839137 Msa1155060:CDS 55.0%
TGTAGCTGACCCCGCTTAGT+GGG - chr7_4:42839119-42839138 Msa1155060:CDS 55.0%
TGACCCCGCTTAGTGGGATA+AGG - chr7_4:42839125-42839144 Msa1155060:CDS 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - chr7_4:42839130-42839149 Msa1155060:CDS 55.0%
GTTGCAACAGGGAGCAACCA+TGG - chr7_4:42840557-42840576 Msa1155060:intron 55.0%
CCGGCGGTGGAATCAAGAGT+TGG + chr7_4:42838159-42838178 None:intergenic 60.0%
!! GAGGAATGGTTCGGTGTCGC+CGG + chr7_4:42838178-42838197 None:intergenic 60.0%
AGTGCGGCGGAGGAATGGTT+CGG + chr7_4:42838187-42838206 None:intergenic 60.0%
!! GTGGTGTGTGGTGGATGGTG+CGG + chr7_4:42838215-42838234 None:intergenic 60.0%
! GAGTGGTGGTGTGTGGTGGA+TGG + chr7_4:42838220-42838239 None:intergenic 60.0%
! GGAAGAAATGGGTGGCGGTG+CGG + chr7_4:42838242-42838261 None:intergenic 60.0%
! GGCGTGACGGAAGAAATGGG+TGG + chr7_4:42838250-42838269 None:intergenic 60.0%
TGCGATGTGAGCTGGCGTGA+CGG + chr7_4:42838263-42838282 None:intergenic 60.0%
ACGAGAGAGAGCAGCAACGG+AGG - chr7_4:42838311-42838330 Msa1155060:three_prime_UTR 60.0%
!! GAATGGTTCGGTGTCGCCGG+CGG + chr7_4:42838175-42838194 None:intergenic 65.0%
!! GTGTGTGGTGGATGGTGCGG+CGG + chr7_4:42838212-42838231 None:intergenic 65.0%
! TGCGGAGTGGTGGTGTGTGG+TGG + chr7_4:42838224-42838243 None:intergenic 65.0%
! AAATGGGTGGCGGTGCGGAG+TGG + chr7_4:42838237-42838256 None:intergenic 65.0%
! CGGAGAGTGCGGCGGAGGAA+TGG + chr7_4:42838192-42838211 None:intergenic 70.0%
GGATGGTGCGGCGGAGAGTG+CGG + chr7_4:42838203-42838222 None:intergenic 70.0%
! CGGTGCGGAGTGGTGGTGTG+TGG + chr7_4:42838227-42838246 None:intergenic 70.0%
!! TGGTTCGGTGTCGCCGGCGG+TGG + chr7_4:42838172-42838191 None:intergenic 75.0%
! TGGTGCGGCGGAGAGTGCGG+CGG + chr7_4:42838200-42838219 None:intergenic 75.0%
! TGGGTGGCGGTGCGGAGTGG+TGG + chr7_4:42838234-42838253 None:intergenic 75.0%
GTGCGAGGAGCTGTGCGCCG+TGG - chr7_4:42839659-42839678 Msa1155060:intron 75.0%
!! TGCGGCGGAGAGTGCGGCGG+AGG + chr7_4:42838197-42838216 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 42838060 42841730 42838060 ID=Msa1155060;Name=Msa1155060
chr7_4 mRNA 42838060 42841730 42838060 ID=Msa1155060-mRNA-1;Parent=Msa1155060;Name=Msa1155060-mRNA-1;_AED=0.09;_eAED=0.09;_QI=81|1|1|1|1|1|5|467|367
chr7_4 exon 42838060 42838697 42838060 ID=Msa1155060-mRNA-1:exon:10632;Parent=Msa1155060-mRNA-1
chr7_4 exon 42839065 42839223 42839065 ID=Msa1155060-mRNA-1:exon:10631;Parent=Msa1155060-mRNA-1
chr7_4 exon 42839509 42839641 42839509 ID=Msa1155060-mRNA-1:exon:10630;Parent=Msa1155060-mRNA-1
chr7_4 exon 42839735 42839854 42839735 ID=Msa1155060-mRNA-1:exon:10629;Parent=Msa1155060-mRNA-1
chr7_4 exon 42841129 42841730 42841129 ID=Msa1155060-mRNA-1:exon:10628;Parent=Msa1155060-mRNA-1
chr7_4 five_prime_UTR 42841650 42841730 42841650 ID=Msa1155060-mRNA-1:five_prime_utr;Parent=Msa1155060-mRNA-1
chr7_4 CDS 42841129 42841649 42841129 ID=Msa1155060-mRNA-1:cds;Parent=Msa1155060-mRNA-1
chr7_4 CDS 42839735 42839854 42839735 ID=Msa1155060-mRNA-1:cds;Parent=Msa1155060-mRNA-1
chr7_4 CDS 42839509 42839641 42839509 ID=Msa1155060-mRNA-1:cds;Parent=Msa1155060-mRNA-1
chr7_4 CDS 42839065 42839223 42839065 ID=Msa1155060-mRNA-1:cds;Parent=Msa1155060-mRNA-1
chr7_4 CDS 42838527 42838697 42838527 ID=Msa1155060-mRNA-1:cds;Parent=Msa1155060-mRNA-1
chr7_4 three_prime_UTR 42838060 42838526 42838060 ID=Msa1155060-mRNA-1:three_prime_utr;Parent=Msa1155060-mRNA-1
Gene Sequence

>Msa1155060

ATGGACACTTCAAATCCAACTCTTGATTCCACCGCCGGCGACACCGAACCATTCCTCCGCCGCACTCTCCGCCGCACCATCCACCACACACCACCACTCCGCACCGCCACCCATTTCTTCCGTCACGCCAGCTCACATCGCATGATGCTCCGCGAACCATCAGTCCGTGTACGAGAGAGAGCAGCAACGGAGGTAGAAAACCGGCAGAGAGAGTGGGCTTATTCGAAACCCGTTGTAGCACTTGATATAGCGTGGAACTTGTCGTTTCTTGTTGTTAGTGTTGTCGTTTTGGGGTTGAGTAGTGAAGAGGAACCGTGTGTGCCTCTTAGGTTGTGGATTTTGGGTTACTTGTTGCAGGGGTTGGTTCATTCGGTGTGTGTTGTTTCGGAATTTAGAAGAAGGAGAAGGGGTAATCATTTGGAAGATGATGATGATTCTGTTTTGGAGAGTGGTTTACGGTGGCGTTTTAGTTCTGAGAGTGAATCTGATTTTGCTTCTGAGCATGAGAGTGAGGAAAATAGTATCATCAAGCACATAGAGTCTGCAAATACCATTCTATCATTCATATGGTGGATTCTTGGGTTCTACTGGGTAACTGTAGGTGGTCAGAGTTTGACAAAGGATTCACCTCAGCTTTACTGGCTATGTATTACATTTCTTGCTTTCGACGTTGTCATTGTAGTGATTTGTGTTGCTGTTGCATGTCTCATTGGAATTGCTGTTTGTTGTTGTCTTCCATGCATACTTGCTATTTTGTATGCAGTGGCTGATCAGGGAGCAACCATGGAAGAGATTGATCAGTTGCCAAAATATAAGTTTAGAATGATAAAGGAATCTAAGGAAGAAGGGGATGCCCAAGAATCATCCAGAGGAGTGATGATGGAATGTGACAGTGATACAGCTTCTGAGCATGTTATTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTTTCTGCCTATGATGATGGGGATGAACTTAGAGAACTTCCTTGCAACCACCATTTTCATTGTACATGCATCGACAAATGGCTGCTAATCTGTGCTACCTGCCCTCTCTGCAAATTTGACATTTTGAGCACTGATAACCCCAATCAAGAAGTTTGA
Protein sequence

>Msa1155060

MDTSNPTLDSTAGDTEPFLRRTLRRTIHHTPPLRTATHFFRHASSHRMMLREPSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRLWILGYLLQGLVHSVCVVSEFRRRRRGNHLEDDDDSVLESGLRWRFSSESESDFASEHESEENSIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVACLIGIAVCCCLPCILAILYAVADQGATMEEIDQLPKYKFRMIKESKEEGDAQESSRGVMMECDSDTASEHVIALEDAECCICLSAYDDGDELRELPCNHHFHCTCIDKWLLICATCPLCKFDILSTDNPNQEV*