AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027580 MtrunA17_Chr7g0246571 96.730 367 11 1 1 367 1 366 0.0 726
Msa1027580 MtrunA17_Chr4g0057351 54.133 375 157 6 1 366 1 369 3.07e-137 395
Msa1027580 MtrunA17_Chr5g0397921 57.185 341 131 5 39 366 47 385 2.62e-123 360
Msa1027580 MtrunA17_Chr8g0391751 48.955 335 160 5 29 361 8 333 1.82e-105 313
Msa1027580 MtrunA17_Chr1g0161291 49.521 313 150 4 51 361 41 347 2.29e-98 295
Msa1027580 MtrunA17_Chr7g0255261 38.721 297 140 6 73 362 34 295 2.30e-64 206
Msa1027580 MtrunA17_Chr1g0148631 35.873 315 167 9 68 357 81 385 2.07e-44 157
Msa1027580 MtrunA17_Chr3g0138451 33.225 307 163 9 79 357 69 361 3.76e-43 154
Msa1027580 MtrunA17_Chr7g0255321 38.776 196 107 4 175 361 100 291 1.76e-34 128
Msa1027580 MtrunA17_Chr5g0446921 31.502 273 142 7 93 354 97 335 1.04e-28 114
Msa1027580 MtrunA17_Chr7g0255331 34.848 198 112 3 175 361 104 295 1.32e-28 113
Msa1027580 MtrunA17_Chr3g0102761 28.519 270 159 7 90 354 88 328 3.17e-28 112
Msa1027580 MtrunA17_Chr3g0112041 38.776 98 57 2 261 355 158 255 1.91e-14 72.8
Msa1027580 MtrunA17_Chr5g0437361 41.558 77 42 2 279 354 71 145 6.10e-14 69.3
Msa1027580 MtrunA17_Chr8g0369691 57.895 57 22 2 309 363 440 496 5.67e-13 70.1
Msa1027580 MtrunA17_Chr3g0113811 55.102 49 21 1 307 354 100 148 1.53e-12 65.5
Msa1027580 MtrunA17_Chr5g0408871 55.556 54 23 1 309 361 501 554 1.58e-12 68.6
Msa1027580 MtrunA17_Chr8g0382811 49.153 59 27 1 306 361 61 119 7.22e-12 63.2
Msa1027580 MtrunA17_Chr4g0031911 35.514 107 66 1 254 357 147 253 8.41e-12 65.1
Msa1027580 MtrunA17_Chr4g0065171 51.667 60 21 3 310 361 480 539 1.30e-11 65.9
Msa1027580 MtrunA17_Chr4g0031921 34.579 107 67 1 254 357 147 253 6.73e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027580 AT3G61180.1 54.595 370 155 7 3 364 10 374 1.08e-136 394
Msa1027580 AT4G11680.1 55.978 368 137 8 14 367 34 390 2.88e-126 369
Msa1027580 AT1G12760.1 52.329 365 150 5 20 366 48 406 9.17e-120 352
Msa1027580 AT4G11680.2 51.889 397 137 9 14 367 34 419 1.11e-119 353
Msa1027580 AT1G63170.1 56.936 346 133 3 33 362 29 374 2.66e-119 350
Msa1027580 AT1G12760.2 53.134 335 139 3 50 366 1 335 7.34e-115 337
Msa1027580 AT1G68070.1 45.028 362 172 7 4 361 2 340 1.02e-101 304
Msa1027580 AT2G01735.1 47.937 315 147 5 51 359 50 353 4.08e-94 285
Msa1027580 AT2G01735.2 49.282 209 95 2 51 256 50 250 1.20e-60 196
Msa1027580 AT4G32600.1 32.895 304 170 8 79 357 113 407 1.30e-46 165
Msa1027580 AT4G32600.2 32.895 304 170 8 79 357 113 407 1.30e-46 165
Msa1027580 AT1G80400.1 31.353 303 175 6 79 357 106 399 1.75e-44 158
Msa1027580 AT4G26580.1 25.706 354 204 10 18 357 25 333 6.30e-29 115
Msa1027580 AT4G26580.2 25.706 354 204 10 18 357 25 333 6.30e-29 115
Msa1027580 AT5G55970.2 28.364 275 154 5 90 357 103 341 1.58e-28 114
Msa1027580 AT5G55970.1 28.364 275 154 5 90 357 103 341 1.58e-28 114
Msa1027580 AT4G09120.1 29.139 151 70 4 218 357 44 168 1.52e-13 71.2
Msa1027580 AT3G55530.1 36.275 102 64 1 255 355 152 253 4.39e-13 69.3
Msa1027580 AT4G09560.1 52.632 57 24 2 313 366 234 290 3.60e-11 64.7
Msa1027580 AT3G10910.1 47.273 55 28 1 305 358 106 160 6.37e-11 61.2

Find 119 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTCTTAGGTTGTGGATTT+TGG 0.071559 7_1:-60045166 Msa1027580:CDS
ATCATTCTAAACTTATATTT+TGG 0.169917 7_1:+60043024 None:intergenic
ATGAGTTGTGATGAATATTT+TGG 0.213907 7_1:+60045564 None:intergenic
GAAACAAATTGTTCCCTATA+TGG 0.217820 7_1:+60042106 None:intergenic
AGGATTCACCTCAGCTTTAC+TGG 0.263802 7_1:-60043587 Msa1027580:intron
CATTCATATGGTGGATTCTT+GGG 0.273975 7_1:-60043647 Msa1027580:CDS
GGTGGATTCTTGGGTTCTAC+TGG 0.283067 7_1:-60043638 Msa1027580:CDS
AAATTGGAGGTGAAATAAAA+TGG 0.284743 7_1:-60042262 Msa1027580:three_prime_UTR
TGTTGTTAGTGTTGTCGTTT+TGG 0.294850 7_1:-60045217 Msa1027580:CDS
AATAGTTCAAACTTCTTGAT+TGG 0.296027 7_1:+60042375 None:intergenic
TAAATTACATTTCTTGCTTA+AGG 0.312943 7_1:-60042031 Msa1027580:three_prime_UTR
AGGAACCGTGTGTGCCTCTT+AGG 0.317425 7_1:-60045179 Msa1027580:CDS
TAGAATGATAAAGGAATCTA+AGG 0.320923 7_1:-60043010 Msa1027580:CDS
ATAGTTCAAACTTCTTGATT+GGG 0.327329 7_1:+60042376 None:intergenic
CACTCCTCTGGATGATTCTT+GGG 0.330017 7_1:+60042975 None:intergenic
AGATGATGATGATTCTGTTT+TGG 0.335055 7_1:-60045064 Msa1027580:CDS
TCACTCCTCTGGATGATTCT+TGG 0.336453 7_1:+60042974 None:intergenic
TCATTCATATGGTGGATTCT+TGG 0.338482 7_1:-60043648 Msa1027580:CDS
GAAACTTACTGCATCTTCTA+AGG 0.363248 7_1:+60042909 None:intergenic
TCATTCGGTGTGTGTTGTTT+CGG 0.372544 7_1:-60045121 Msa1027580:CDS
TGGTTCGGTGTCGCCGGCGG+TGG 0.372922 7_1:+60045458 None:intergenic
CGGTTTCAACCAAACCATAT+AGG 0.374764 7_1:-60042120 Msa1027580:three_prime_UTR
AGCATGAGAGTGAGGAAAAT+AGG 0.377979 7_1:-60044987 Msa1027580:intron
TATATGGCAAATGAGTTAAC+AGG 0.391846 7_1:-60041932 Msa1027580:three_prime_UTR
CGATGCATGTACAATGAAAA+TGG 0.393238 7_1:+60042464 None:intergenic
TTTGTATGCAGTGGCTGATC+AGG 0.395991 7_1:-60043361 Msa1027580:intron
AAGGAGAAGGGGTAATCATT+TGG 0.397806 7_1:-60045088 Msa1027580:CDS
GGTTTCAACCAAACCATATA+GGG 0.399972 7_1:-60042119 Msa1027580:three_prime_UTR
ATATAAGTTTAGAATGATAA+AGG 0.400086 7_1:-60043019 Msa1027580:CDS
GTTGCTGTTGCATGTCTCAT+TGG 0.406532 7_1:-60043423 Msa1027580:CDS
GGGTTACTTGTTGCAGGGGT+TGG 0.406648 7_1:-60045145 Msa1027580:CDS
TGCCTTTCTGCCTATGATGA+TGG 0.409942 7_1:-60042517 Msa1027580:CDS
AAATTGTTCCCTATATGGTT+TGG 0.412620 7_1:+60042111 None:intergenic
GTTGCAGGGGTTGGTTCATT+CGG 0.419819 7_1:-60045136 Msa1027580:CDS
AGCTGGCGTGACGGAAGAAA+TGG 0.426808 7_1:+60045376 None:intergenic
GCCTTTCTGCCTATGATGAT+GGG 0.437791 7_1:-60042516 Msa1027580:CDS
TGGGTGGCGGTGCGGAGTGG+TGG 0.438767 7_1:+60045396 None:intergenic
AAGTTCATCCCCATCATCAT+AGG 0.439491 7_1:+60042507 None:intergenic
ATACTGTAAAATAAAACAAT+AGG 0.447224 7_1:+60042003 None:intergenic
AATATGAGATTGTTGTGAAA+AGG 0.447388 7_1:+60042322 None:intergenic
AGGGAACAATTTGTTTCCAT+TGG 0.448428 7_1:-60042100 Msa1027580:three_prime_UTR
TAGAAAACCGGCAGAGAGAG+TGG 0.450579 7_1:-60045293 Msa1027580:CDS
GGAATTTAGAAGAAGGAGAA+GGG 0.457083 7_1:-60045100 Msa1027580:CDS
ATTGTACATGCATCGACAAA+TGG 0.457199 7_1:-60042456 Msa1027580:CDS
TAAAGGAATCTAAGGAAGAA+GGG 0.460524 7_1:-60043002 Msa1027580:CDS
GAGGAATGGTTCGGTGTCGC+CGG 0.464396 7_1:+60045452 None:intergenic
ATACCATTCTATCATTCATA+TGG 0.466212 7_1:-60043659 Msa1027580:CDS
ATCATCCAGAGGAGTGATGA+TGG 0.468538 7_1:-60042968 Msa1027580:CDS
ACATTCCATCATCACTCCTC+TGG 0.470831 7_1:+60042963 None:intergenic
CGGAATTTAGAAGAAGGAGA+AGG 0.471716 7_1:-60045101 Msa1027580:CDS
ATAAAGGAATCTAAGGAAGA+AGG 0.474243 7_1:-60043003 Msa1027580:CDS
CGGAGAGTGCGGCGGAGGAA+TGG 0.476571 7_1:+60045438 None:intergenic
ATATGAGATTGTTGTGAAAA+GGG 0.478602 7_1:+60042323 None:intergenic
TGCGGCGGAGAGTGCGGCGG+AGG 0.482239 7_1:+60045433 None:intergenic
CCCAAAATCCACAACCTAAG+AGG 0.485492 7_1:+60045165 None:intergenic
CGCTATATCAAGTGCTACAA+CGG 0.486749 7_1:+60045257 None:intergenic
CCACCATATGAATGATAGAA+TGG 0.504409 7_1:+60043656 None:intergenic
GAGCATCATGCGATGTGAGC+TGG 0.505000 7_1:+60045359 None:intergenic
TGCGGAGTGGTGGTGTGTGG+TGG 0.507350 7_1:+60045406 None:intergenic
GAGTGGTGGTGTGTGGTGGA+TGG 0.508063 7_1:+60045410 None:intergenic
GTCAAATTTGCAGAGAGGGC+AGG 0.508739 7_1:+60042417 None:intergenic
AATGAGTTAACAGGTGTTGT+GGG 0.511185 7_1:-60041923 None:intergenic
GTGGATTCTTGGGTTCTACT+GGG 0.512537 7_1:-60043637 Msa1027580:CDS
TTGTTTCGGAATTTAGAAGA+AGG 0.513254 7_1:-60045107 Msa1027580:CDS
CAACTGATCAATCTCTTCCA+TGG 0.515755 7_1:+60043047 None:intergenic
CAGCAACGGAGGTAGAAAAC+CGG 0.516009 7_1:-60045305 Msa1027580:CDS
GTGTGTGGTGGATGGTGCGG+CGG 0.517333 7_1:+60045418 None:intergenic
CCCCATCATCATAGGCAGAA+AGG 0.517479 7_1:+60042515 None:intergenic
CGGTGCGGAGTGGTGGTGTG+TGG 0.523611 7_1:+60045403 None:intergenic
AATAAGCCCACTCTCTCTGC+CGG 0.525420 7_1:+60045286 None:intergenic
CCATTCTATCATTCATATGG+TGG 0.534282 7_1:-60043656 Msa1027580:CDS
TACAAAATAGCAAGTATGCA+TGG 0.536121 7_1:+60043378 None:intergenic
GGATGGTGCGGCGGAGAGTG+CGG 0.537793 7_1:+60045427 None:intergenic
GGGTTCTACTGGGTAACTGT+AGG 0.540359 7_1:-60043627 Msa1027580:CDS
GCTATATCAAGTGCTACAAC+GGG 0.540999 7_1:+60045258 None:intergenic
GTGGTGTGTGGTGGATGGTG+CGG 0.546396 7_1:+60045415 None:intergenic
AAATGTCAAATTTGCAGAGA+GGG 0.546411 7_1:+60042413 None:intergenic
AGTGCGGCGGAGGAATGGTT+CGG 0.550111 7_1:+60045443 None:intergenic
ATTTACTTGTTGCATTGACT+AGG 0.555693 7_1:-60042355 Msa1027580:three_prime_UTR
GAATGGTTCGGTGTCGCCGG+CGG 0.558327 7_1:+60045455 None:intergenic
AAATGGGTGGCGGTGCGGAG+TGG 0.561435 7_1:+60045393 None:intergenic
TAGTTCAAACTTCTTGATTG+GGG 0.561948 7_1:+60042377 None:intergenic
TTCTACTGGGTAACTGTAGG+TGG 0.562552 7_1:-60043624 Msa1027580:CDS
CTGTAAAATAAAACAATAGG+TGG 0.564598 7_1:+60042006 None:intergenic
CTCTCTCGTACACGGACTGA+TGG 0.565171 7_1:+60045330 None:intergenic
TTGCTGCTCTCTCTCGTACA+CGG 0.571405 7_1:+60045322 None:intergenic
TGGTGCGGCGGAGAGTGCGG+CGG 0.573001 7_1:+60045430 None:intergenic
TGCTTCTGAGCATGAGAGTG+AGG 0.574400 7_1:-60044995 Msa1027580:CDS
GTTGCAACAGGGAGCAACCA+TGG 0.575202 7_1:-60043064 Msa1027580:intron
CCTTTCTGCCTATGATGATG+GGG 0.577985 7_1:-60042515 Msa1027580:CDS
CCAACTCTTGATTCCACCGC+CGG 0.581351 7_1:-60045471 Msa1027580:CDS
TGTACGAGAGAGAGCAGCAA+CGG 0.582872 7_1:-60045319 Msa1027580:CDS
ACTTGTTGCATTGACTAGGT+CGG 0.585284 7_1:-60042351 Msa1027580:three_prime_UTR
CGTGTGTGCCTCTTAGGTTG+TGG 0.586299 7_1:-60045173 Msa1027580:CDS
AAATGAGTTAACAGGTGTTG+TGG 0.587836 7_1:-60041924 None:intergenic
CAATGAAAATGGTGGTTGCA+AGG 0.595758 7_1:+60042475 None:intergenic
AAAGGAATCTAAGGAAGAAG+GGG 0.596666 7_1:-60043001 Msa1027580:CDS
AAGTTATGAGCTAAAGTGAA+AGG 0.596976 7_1:+60042057 None:intergenic
CCGGCGGTGGAATCAAGAGT+TGG 0.597585 7_1:+60045471 None:intergenic
TTTGGGGTTGAGTAGTGAAG+AGG 0.598216 7_1:-60045199 Msa1027580:CDS
AAATTCTTCATATATACCAA+TGG 0.600971 7_1:+60042084 None:intergenic
ATTGTGTTGTCTATAATCAG+CGG 0.603433 7_1:-60042140 Msa1027580:three_prime_UTR
GCTGGCGTGACGGAAGAAAT+GGG 0.609208 7_1:+60045377 None:intergenic
GTACACGGACTGATGGTTCG+CGG 0.614957 7_1:+60045337 None:intergenic
CACAACCTAAGAGGCACACA+CGG 0.615339 7_1:+60045174 None:intergenic
GAATTTAGAAGAAGGAGAAG+GGG 0.618972 7_1:-60045099 Msa1027580:CDS
GTGACGGAAGAAATGGGTGG+CGG 0.623989 7_1:+60045383 None:intergenic
AGAAAACCGGCAGAGAGAGT+GGG 0.626051 7_1:-60045292 Msa1027580:CDS
TTGTAGCACTTGATATAGCG+TGG 0.627128 7_1:-60045254 Msa1027580:CDS
GGAAGAAATGGGTGGCGGTG+CGG 0.627635 7_1:+60045388 None:intergenic
ACGAGAGAGAGCAGCAACGG+AGG 0.636128 7_1:-60045316 Msa1027580:CDS
GCGTCTATAACATTTAGCGA+TGG 0.639258 7_1:+60042223 None:intergenic
GTAACTAACCAGTAAAGCTG+AGG 0.656097 7_1:+60043579 None:intergenic
AGGTGGTCAGAGTTTGACAA+AGG 0.661788 7_1:-60043607 Msa1027580:CDS
AAAATGTCAAATTTGCAGAG+AGG 0.690069 7_1:+60042412 None:intergenic
AGTATATCTCTTAAATGACA+AGG 0.696596 7_1:-60041985 Msa1027580:three_prime_UTR
GATGCCCAAGAATCATCCAG+AGG 0.736665 7_1:-60042979 Msa1027580:CDS
GGCGTGACGGAAGAAATGGG+TGG 0.750782 7_1:+60045380 None:intergenic
TGCATGTACAATGAAAATGG+TGG 0.793998 7_1:+60042467 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCACATATTTTTTACTAT+AGG + chr7_1:60042751-60042770 None:intergenic 15.0%
!! GTAAAAAATATGTGAAAAAT+AGG - chr7_1:60042754-60042773 Msa1027580:intron 15.0%
!! ATCAAAATCAAACTTAAATT+TGG - chr7_1:60043203-60043222 Msa1027580:intron 15.0%
!! AAAAATAAGAACAATGAATT+TGG - chr7_1:60044228-60044247 Msa1027580:intron 15.0%
!!! ATCATTCTAAACTTATATTT+TGG + chr7_1:60044468-60044487 None:intergenic 15.0%
!!! ATATAAGTTTAGAATGATAA+AGG - chr7_1:60044470-60044489 Msa1027580:intron 15.0%
!!! AAGTTTCTAGTTATTAAATT+TGG - chr7_1:60044596-60044615 Msa1027580:intron 15.0%
!!! AATGTAAATTACAGTATTTT+TGG - chr7_1:60044853-60044872 Msa1027580:intron 15.0%
!!! TTACTTGTTTTTACATTTAA+TGG - chr7_1:60044914-60044933 Msa1027580:intron 15.0%
!! ATACTGTAAAATAAAACAAT+AGG + chr7_1:60045489-60045508 None:intergenic 15.0%
!! AAACTATAAGAGAAACTATT+TGG - chr7_1:60042882-60042901 Msa1027580:intron 20.0%
!!! CTGTATTTAACTTTGTATTT+AGG - chr7_1:60043739-60043758 Msa1027580:intron 20.0%
!! ATACGACAAACAATAAAATA+AGG + chr7_1:60044166-60044185 None:intergenic 20.0%
!!! TATTTTATTGTTTGTCGTAT+AGG - chr7_1:60044166-60044185 Msa1027580:intron 20.0%
!!! AGATTTAACTTTTGTTCTAA+AGG - chr7_1:60044880-60044899 Msa1027580:intron 20.0%
!! AAATTCTTCATATATACCAA+TGG + chr7_1:60045408-60045427 None:intergenic 20.0%
!! TAAATTACATTTCTTGCTTA+AGG - chr7_1:60045458-60045477 Msa1027580:CDS 20.0%
!!! GAAAAATATGTTGCTTTATA+TGG - chr7_1:60045541-60045560 Msa1027580:five_prime_UTR 20.0%
!! ATGAGTTGTGATGAATATTT+TGG + chr7_1:60041928-60041947 None:intergenic 25.0%
!! AACTATTTGGAAAGATTTTG+AGG - chr7_1:60042895-60042914 Msa1027580:intron 25.0%
! GTTCTATCATAAACCATATT+TGG + chr7_1:60042935-60042954 None:intergenic 25.0%
! AAATTGCAAATAAAAGAACG+TGG - chr7_1:60043160-60043179 Msa1027580:intron 25.0%
! TACACATGATTGAATTACAA+TGG - chr7_1:60043577-60043596 Msa1027580:intron 25.0%
! AATTATGAACAGAATTCAGT+AGG + chr7_1:60043685-60043704 None:intergenic 25.0%
!! ATAATTCAGAGTATCTTGTT+TGG - chr7_1:60043699-60043718 Msa1027580:intron 25.0%
! AAGTTTGTAACCTGTATTAT+TGG - chr7_1:60043769-60043788 Msa1027580:intron 25.0%
! ATACCATTCTATCATTCATA+TGG - chr7_1:60043830-60043849 Msa1027580:intron 25.0%
! TAGAATGATAAAGGAATCTA+AGG - chr7_1:60044479-60044498 Msa1027580:intron 25.0%
!! CTATTTAGATATGATTTTGC+AGG + chr7_1:60044820-60044839 None:intergenic 25.0%
! ATCATATCTAAATAGTGACA+TGG - chr7_1:60044825-60044844 Msa1027580:intron 25.0%
!!! AACTTTTGTTCTAAAGGTTT+AGG - chr7_1:60044886-60044905 Msa1027580:intron 25.0%
! ATAGTTCAAACTTCTTGATT+GGG + chr7_1:60045116-60045135 None:intergenic 25.0%
! AATAGTTCAAACTTCTTGAT+TGG + chr7_1:60045117-60045136 None:intergenic 25.0%
! ATATGAGATTGTTGTGAAAA+GGG + chr7_1:60045169-60045188 None:intergenic 25.0%
! AATATGAGATTGTTGTGAAA+AGG + chr7_1:60045170-60045189 None:intergenic 25.0%
! AAATTGGAGGTGAAATAAAA+TGG - chr7_1:60045227-60045246 Msa1027580:CDS 25.0%
! CTGTAAAATAAAACAATAGG+TGG + chr7_1:60045486-60045505 None:intergenic 25.0%
! AGTATATCTCTTAAATGACA+AGG - chr7_1:60045504-60045523 Msa1027580:exon 25.0%
TTGTTTCGGAATTTAGAAGA+AGG - chr7_1:60042382-60042401 Msa1027580:CDS 30.0%
!! AGATGATGATGATTCTGTTT+TGG - chr7_1:60042425-60042444 Msa1027580:CDS 30.0%
TATGTGAAAAATAGGCTTAG+TGG - chr7_1:60042762-60042781 Msa1027580:intron 30.0%
!!! TGGAAAGATTTTGAGGTTAA+TGG - chr7_1:60042902-60042921 Msa1027580:intron 30.0%
!!! GGAAAGATTTTGAGGTTAAT+GGG - chr7_1:60042903-60042922 Msa1027580:intron 30.0%
TTCGAGAAAAACATATAGAC+AGG + chr7_1:60043097-60043116 None:intergenic 30.0%
! TGTAACTTTTGCCATGATTA+AGG + chr7_1:60043136-60043155 None:intergenic 30.0%
TTATGATTGAGATAGTGACA+TGG + chr7_1:60043261-60043280 None:intergenic 30.0%
ATGTCACTATCTCAATCATA+AGG - chr7_1:60043260-60043279 Msa1027580:intron 30.0%
AAACTTTAGGTAGAAGTTCA+AGG + chr7_1:60043296-60043315 None:intergenic 30.0%
TAGGTGTTAAAATTAGAGCA+AGG + chr7_1:60043502-60043521 None:intergenic 30.0%
!! ATATGTGAGAAGTGTTATTC+TGG - chr7_1:60043552-60043571 Msa1027580:intron 30.0%
ACATGATTGAATTACAATGG+AGG - chr7_1:60043580-60043599 Msa1027580:intron 30.0%
TACAGGTTACAAACTTGATA+AGG + chr7_1:60043765-60043784 None:intergenic 30.0%
GATAGTTCAACCAATAATAC+AGG + chr7_1:60043782-60043801 None:intergenic 30.0%
AAAATTGCAAGGAAGAAACA+TGG + chr7_1:60043968-60043987 None:intergenic 30.0%
TACAAAATAGCAAGTATGCA+TGG + chr7_1:60044114-60044133 None:intergenic 30.0%
ATAAAGGAATCTAAGGAAGA+AGG - chr7_1:60044486-60044505 Msa1027580:intron 30.0%
TAAAGGAATCTAAGGAAGAA+GGG - chr7_1:60044487-60044506 Msa1027580:intron 30.0%
TCTTACAACTATTCCATGTT+TGG - chr7_1:60044669-60044688 Msa1027580:intron 30.0%
! TGATTTTGCAGGTGTTAAAT+AGG + chr7_1:60044809-60044828 None:intergenic 30.0%
! CATTTAATGGATCTGATTGA+TGG - chr7_1:60044927-60044946 Msa1027580:intron 30.0%
AAATGTCAAATTTGCAGAGA+GGG + chr7_1:60045079-60045098 None:intergenic 30.0%
AAAATGTCAAATTTGCAGAG+AGG + chr7_1:60045080-60045099 None:intergenic 30.0%
TAGTTCAAACTTCTTGATTG+GGG + chr7_1:60045115-60045134 None:intergenic 30.0%
!! ATTTACTTGTTGCATTGACT+AGG - chr7_1:60045134-60045153 Msa1027580:CDS 30.0%
ATTGTGTTGTCTATAATCAG+CGG - chr7_1:60045349-60045368 Msa1027580:CDS 30.0%
AAATTGTTCCCTATATGGTT+TGG + chr7_1:60045381-60045400 None:intergenic 30.0%
GAAACAAATTGTTCCCTATA+TGG + chr7_1:60045386-60045405 None:intergenic 30.0%
AAGTTATGAGCTAAAGTGAA+AGG + chr7_1:60045435-60045454 None:intergenic 30.0%
TATATGGCAAATGAGTTAAC+AGG - chr7_1:60045557-60045576 Msa1027580:five_prime_UTR 30.0%
!! TGTTGTTAGTGTTGTCGTTT+TGG - chr7_1:60042272-60042291 Msa1027580:three_prime_UTR 35.0%
!!! GTTGTTAGTGTTGTCGTTTT+GGG - chr7_1:60042273-60042292 Msa1027580:three_prime_UTR 35.0%
!!! TTGTTAGTGTTGTCGTTTTG+GGG - chr7_1:60042274-60042293 Msa1027580:three_prime_UTR 35.0%
!!! ATTTTGGGTTACTTGTTGCA+GGG - chr7_1:60042339-60042358 Msa1027580:three_prime_UTR 35.0%
GGAATTTAGAAGAAGGAGAA+GGG - chr7_1:60042389-60042408 Msa1027580:CDS 35.0%
GAATTTAGAAGAAGGAGAAG+GGG - chr7_1:60042390-60042409 Msa1027580:CDS 35.0%
ACATTAGTTAGAGAGAGAGT+TGG - chr7_1:60042718-60042737 Msa1027580:intron 35.0%
CATTAGTTAGAGAGAGAGTT+GGG - chr7_1:60042719-60042738 Msa1027580:intron 35.0%
ATTAGTTAGAGAGAGAGTTG+GGG - chr7_1:60042720-60042739 Msa1027580:intron 35.0%
GAAAAATAGGCTTAGTGGTT+TGG - chr7_1:60042767-60042786 Msa1027580:intron 35.0%
! GACCTGTTGATTATGTAGTA+AGG - chr7_1:60042804-60042823 Msa1027580:intron 35.0%
CTCCTTACTACATAATCAAC+AGG + chr7_1:60042809-60042828 None:intergenic 35.0%
GAGGATAGTTATATTACACG+AGG - chr7_1:60042842-60042861 Msa1027580:intron 35.0%
AGTTATATTACACGAGGTAG+AGG - chr7_1:60042848-60042867 Msa1027580:intron 35.0%
!!! AGATTTTGAGGTTAATGGGT+TGG - chr7_1:60042907-60042926 Msa1027580:intron 35.0%
TTGCAAATAAAAGAACGTGG+AGG - chr7_1:60043163-60043182 Msa1027580:intron 35.0%
AAGAAGTGAAGTAATGTGCA+CGG + chr7_1:60043426-60043445 None:intergenic 35.0%
! AGAGTATCTTGTTTGGAATG+TGG - chr7_1:60043706-60043725 Msa1027580:intron 35.0%
CCACCATATGAATGATAGAA+TGG + chr7_1:60043836-60043855 None:intergenic 35.0%
CCATTCTATCATTCATATGG+TGG - chr7_1:60043833-60043852 Msa1027580:intron 35.0%
!! TCATTCATATGGTGGATTCT+TGG - chr7_1:60043841-60043860 Msa1027580:intron 35.0%
!! CATTCATATGGTGGATTCTT+GGG - chr7_1:60043842-60043861 Msa1027580:intron 35.0%
ACGATGGTTACAAAATTGCA+AGG + chr7_1:60043979-60043998 None:intergenic 35.0%
!!! ACTTGCTATTTTGTATGCAG+TGG - chr7_1:60044119-60044138 Msa1027580:intron 35.0%
TCAGTAGAGTTAGTCAAAAC+CGG - chr7_1:60044273-60044292 Msa1027580:intron 35.0%
! AAAACCGGTTCAGTTTCAAT+AGG - chr7_1:60044288-60044307 Msa1027580:intron 35.0%
! AAACCGGTTCAGTTTCAATA+GGG - chr7_1:60044289-60044308 Msa1027580:intron 35.0%
AGACTGATAAATGCGAGAAA+TGG + chr7_1:60044370-60044389 None:intergenic 35.0%
AAAGGAATCTAAGGAAGAAG+GGG - chr7_1:60044488-60044507 Msa1027580:intron 35.0%
GAAACTTACTGCATCTTCTA+AGG + chr7_1:60044583-60044602 None:intergenic 35.0%
AAACATGGAATAAACCAGCA+AGG + chr7_1:60044736-60044755 None:intergenic 35.0%
!! TTGCTGGTTTATTCCATGTT+TGG - chr7_1:60044735-60044754 Msa1027580:intron 35.0%
! TAAGTTTTCATAAGCCAGCA+AGG + chr7_1:60044769-60044788 None:intergenic 35.0%
TGCATGTACAATGAAAATGG+TGG + chr7_1:60045025-60045044 None:intergenic 35.0%
CGATGCATGTACAATGAAAA+TGG + chr7_1:60045028-60045047 None:intergenic 35.0%
! ATTGTACATGCATCGACAAA+TGG - chr7_1:60045033-60045052 Msa1027580:CDS 35.0%
GGTTTCAACCAAACCATATA+GGG - chr7_1:60045370-60045389 Msa1027580:CDS 35.0%
! AGGGAACAATTTGTTTCCAT+TGG - chr7_1:60045389-60045408 Msa1027580:CDS 35.0%
GCTATATCAAGTGCTACAAC+GGG + chr7_1:60042234-60042253 None:intergenic 40.0%
CGCTATATCAAGTGCTACAA+CGG + chr7_1:60042235-60042254 None:intergenic 40.0%
TTGTAGCACTTGATATAGCG+TGG - chr7_1:60042235-60042254 Msa1027580:three_prime_UTR 40.0%
!! CCTCTTAGGTTGTGGATTTT+GGG - chr7_1:60042324-60042343 Msa1027580:three_prime_UTR 40.0%
!!! GATTTTGGGTTACTTGTTGC+AGG - chr7_1:60042338-60042357 Msa1027580:three_prime_UTR 40.0%
!!! TTTTGGGTTACTTGTTGCAG+GGG - chr7_1:60042340-60042359 Msa1027580:three_prime_UTR 40.0%
!! TCATTCGGTGTGTGTTGTTT+CGG - chr7_1:60042368-60042387 Msa1027580:exon 40.0%
CGGAATTTAGAAGAAGGAGA+AGG - chr7_1:60042388-60042407 Msa1027580:CDS 40.0%
AAGGAGAAGGGGTAATCATT+TGG - chr7_1:60042401-60042420 Msa1027580:CDS 40.0%
!!! GATGATTCTGTTTTGGAGAG+TGG - chr7_1:60042432-60042451 Msa1027580:CDS 40.0%
!!! CTGTTTTGGAGAGTGGTTTA+CGG - chr7_1:60042439-60042458 Msa1027580:CDS 40.0%
AGCATGAGAGTGAGGAAAAT+AGG - chr7_1:60042502-60042521 Msa1027580:CDS 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr7_1:60042820-60042839 Msa1027580:intron 40.0%
!! TAATGGGTTGGAGCCAAATA+TGG - chr7_1:60042919-60042938 Msa1027580:CDS 40.0%
TCTCGAATGTAGACCTTAGT+TGG - chr7_1:60043110-60043129 Msa1027580:intron 40.0%
!! ACCTTAGTTGGCCTTAATCA+TGG - chr7_1:60043122-60043141 Msa1027580:intron 40.0%
CTATCTCAATCATAAGGACG+TGG - chr7_1:60043266-60043285 Msa1027580:intron 40.0%
CAACTGACACTGCAAACTTT+AGG + chr7_1:60043309-60043328 None:intergenic 40.0%
!! AACGATTGTCAAGCATCGAT+CGG - chr7_1:60043343-60043362 Msa1027580:intron 40.0%
AGCAAGGTAAGCAGAAAACA+AGG + chr7_1:60043486-60043505 None:intergenic 40.0%
TTAACACCTATCTTTGTGCG+AGG - chr7_1:60043512-60043531 Msa1027580:intron 40.0%
ACACTTCTCACATATCACCA+CGG + chr7_1:60043547-60043566 None:intergenic 40.0%
GTAACTAACCAGTAAAGCTG+AGG + chr7_1:60043913-60043932 None:intergenic 40.0%
AGTTTCAATAGGGCTGATGA+AGG - chr7_1:60044299-60044318 Msa1027580:intron 40.0%
GTTTCAATAGGGCTGATGAA+GGG - chr7_1:60044300-60044319 Msa1027580:intron 40.0%
TTTCAATAGGGCTGATGAAG+GGG - chr7_1:60044301-60044320 Msa1027580:intron 40.0%
TTGACCTCAAATGTTGCAAC+AGG - chr7_1:60044413-60044432 Msa1027580:intron 40.0%
TGACCTCAAATGTTGCAACA+GGG - chr7_1:60044414-60044433 Msa1027580:intron 40.0%
CAACTGATCAATCTCTTCCA+TGG + chr7_1:60044445-60044464 None:intergenic 40.0%
AAACATGGAATAAGCCAGCA+AGG + chr7_1:60044703-60044722 None:intergenic 40.0%
!! TTGCTGGCTTATTCCATGTT+TGG - chr7_1:60044702-60044721 Msa1027580:intron 40.0%
!! TCTGATTGATGGTGAATTCC+AGG - chr7_1:60044938-60044957 Msa1027580:intron 40.0%
AAGTTCATCCCCATCATCAT+AGG + chr7_1:60044985-60045004 None:intergenic 40.0%
CAATGAAAATGGTGGTTGCA+AGG + chr7_1:60045017-60045036 None:intergenic 40.0%
!! ACTTGTTGCATTGACTAGGT+CGG - chr7_1:60045138-60045157 Msa1027580:CDS 40.0%
! CCAATTTTTGTCAGTGACTC+TGG + chr7_1:60045214-60045233 None:intergenic 40.0%
CCAGAGTCACTGACAAAAAT+TGG - chr7_1:60045211-60045230 Msa1027580:CDS 40.0%
GAGTCACTGACAAAAATTGG+AGG - chr7_1:60045214-60045233 Msa1027580:CDS 40.0%
GCGTCTATAACATTTAGCGA+TGG + chr7_1:60045269-60045288 None:intergenic 40.0%
CGGTTTCAACCAAACCATAT+AGG - chr7_1:60045369-60045388 Msa1027580:CDS 40.0%
! TTTGGGGTTGAGTAGTGAAG+AGG - chr7_1:60042290-60042309 Msa1027580:three_prime_UTR 45.0%
!! GCCTCTTAGGTTGTGGATTT+TGG - chr7_1:60042323-60042342 Msa1027580:three_prime_UTR 45.0%
CCCAAAATCCACAACCTAAG+AGG + chr7_1:60042327-60042346 None:intergenic 45.0%
!! TTTTGGAGAGTGGTTTACGG+TGG - chr7_1:60042442-60042461 Msa1027580:CDS 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr7_1:60042823-60042842 Msa1027580:intron 45.0%
GCCATGATTAAGGCCAACTA+AGG + chr7_1:60043126-60043145 None:intergenic 45.0%
ATGAGACACATCTTTACGCG+AGG - chr7_1:60043381-60043400 Msa1027580:CDS 45.0%
CAGCTCTATACGAGTAGTGA+TGG + chr7_1:60043457-60043476 None:intergenic 45.0%
CATCACTACTCGTATAGAGC+TGG - chr7_1:60043455-60043474 Msa1027580:CDS 45.0%
GTGGATTCTTGGGTTCTACT+GGG - chr7_1:60043852-60043871 Msa1027580:intron 45.0%
TTCTACTGGGTAACTGTAGG+TGG - chr7_1:60043865-60043884 Msa1027580:intron 45.0%
AGGTGGTCAGAGTTTGACAA+AGG - chr7_1:60043882-60043901 Msa1027580:intron 45.0%
AGGATTCACCTCAGCTTTAC+TGG - chr7_1:60043902-60043921 Msa1027580:intron 45.0%
GCAAAACACAACATGCACGA+TGG + chr7_1:60043995-60044014 None:intergenic 45.0%
! TCGTGCATGTTGTGTTTTGC+AGG - chr7_1:60043995-60044014 Msa1027580:intron 45.0%
! GTTGCTGTTGCATGTCTCAT+TGG - chr7_1:60044066-60044085 Msa1027580:intron 45.0%
TTTGTATGCAGTGGCTGATC+AGG - chr7_1:60044128-60044147 Msa1027580:intron 45.0%
CAGCCCTATTGAAACTGAAC+CGG + chr7_1:60044295-60044314 None:intergenic 45.0%
CACTCCTCTGGATGATTCTT+GGG + chr7_1:60044517-60044536 None:intergenic 45.0%
TCACTCCTCTGGATGATTCT+TGG + chr7_1:60044518-60044537 None:intergenic 45.0%
ATCATCCAGAGGAGTGATGA+TGG - chr7_1:60044521-60044540 Msa1027580:intron 45.0%
ACATTCCATCATCACTCCTC+TGG + chr7_1:60044529-60044548 None:intergenic 45.0%
! CAAGGCTTTAGCACCAAACA+TGG + chr7_1:60044685-60044704 None:intergenic 45.0%
! CAAGGCTTTAGCACCAAACA+TGG + chr7_1:60044685-60044704 None:intergenic 45.0%
! CAAGGCTTTAGCACCAAACA+TGG + chr7_1:60044685-60044704 None:intergenic 45.0%
AAAGGCAGATACAGCATTCC+TGG + chr7_1:60044959-60044978 None:intergenic 45.0%
TGCCTTTCTGCCTATGATGA+TGG - chr7_1:60044972-60044991 Msa1027580:intron 45.0%
GCCTTTCTGCCTATGATGAT+GGG - chr7_1:60044973-60044992 Msa1027580:intron 45.0%
! CCTTTCTGCCTATGATGATG+GGG - chr7_1:60044974-60044993 Msa1027580:intron 45.0%
!! AAGATTAAAAAAAAAAAAAA+TGG - chr7_1:60041984-60042003 Msa1027580:three_prime_UTR 5.0%
TTGCTGCTCTCTCTCGTACA+CGG + chr7_1:60042170-60042189 None:intergenic 50.0%
TGTACGAGAGAGAGCAGCAA+CGG - chr7_1:60042170-60042189 Msa1027580:three_prime_UTR 50.0%
CAGCAACGGAGGTAGAAAAC+CGG - chr7_1:60042184-60042203 Msa1027580:three_prime_UTR 50.0%
TAGAAAACCGGCAGAGAGAG+TGG - chr7_1:60042196-60042215 Msa1027580:three_prime_UTR 50.0%
AGAAAACCGGCAGAGAGAGT+GGG - chr7_1:60042197-60042216 Msa1027580:three_prime_UTR 50.0%
AATAAGCCCACTCTCTCTGC+CGG + chr7_1:60042206-60042225 None:intergenic 50.0%
! CACAACCTAAGAGGCACACA+CGG + chr7_1:60042318-60042337 None:intergenic 50.0%
!! GTTGCAGGGGTTGGTTCATT+CGG - chr7_1:60042353-60042372 Msa1027580:three_prime_UTR 50.0%
TGCTTCTGAGCATGAGAGTG+AGG - chr7_1:60042494-60042513 Msa1027580:CDS 50.0%
CTACTAGCGTAGCTGAGATG+AGG - chr7_1:60042660-60042679 Msa1027580:intron 50.0%
! AAGCCTTATCCCACTAAGCG+GGG + chr7_1:60042993-60043012 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG + chr7_1:60042994-60043013 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + chr7_1:60042995-60043014 None:intergenic 50.0%
ACAGCTCCTCGCACAAAGAT+AGG + chr7_1:60043521-60043540 None:intergenic 50.0%
! GGTGGATTCTTGGGTTCTAC+TGG - chr7_1:60043851-60043870 Msa1027580:intron 50.0%
GGGTTCTACTGGGTAACTGT+AGG - chr7_1:60043862-60043881 Msa1027580:intron 50.0%
GCTCCCTGTTGCAACATTTG+AGG + chr7_1:60044420-60044439 None:intergenic 50.0%
GATGCCCAAGAATCATCCAG+AGG - chr7_1:60044510-60044529 Msa1027580:intron 50.0%
!! GTTTGGTGCTAAAGCCTTGC+TGG - chr7_1:60044686-60044705 Msa1027580:intron 50.0%
!! GTTTGGTGCTAAAGCCTTGC+TGG - chr7_1:60044686-60044705 Msa1027580:intron 50.0%
!! GTTTGGTGCTAAAGCCTTGC+TGG - chr7_1:60044686-60044705 Msa1027580:intron 50.0%
CCCCATCATCATAGGCAGAA+AGG + chr7_1:60044977-60044996 None:intergenic 50.0%
GTCAAATTTGCAGAGAGGGC+AGG + chr7_1:60045075-60045094 None:intergenic 50.0%
CCAACTCTTGATTCCACCGC+CGG - chr7_1:60042018-60042037 Msa1027580:three_prime_UTR 55.0%
! GTGACGGAAGAAATGGGTGG+CGG + chr7_1:60042109-60042128 None:intergenic 55.0%
! GCTGGCGTGACGGAAGAAAT+GGG + chr7_1:60042115-60042134 None:intergenic 55.0%
! AGCTGGCGTGACGGAAGAAA+TGG + chr7_1:60042116-60042135 None:intergenic 55.0%
GAGCATCATGCGATGTGAGC+TGG + chr7_1:60042133-60042152 None:intergenic 55.0%
! GTACACGGACTGATGGTTCG+CGG + chr7_1:60042155-60042174 None:intergenic 55.0%
! CTCTCTCGTACACGGACTGA+TGG + chr7_1:60042162-60042181 None:intergenic 55.0%
AGGAACCGTGTGTGCCTCTT+AGG - chr7_1:60042310-60042329 Msa1027580:three_prime_UTR 55.0%
! CGTGTGTGCCTCTTAGGTTG+TGG - chr7_1:60042316-60042335 Msa1027580:three_prime_UTR 55.0%
! GGGTTACTTGTTGCAGGGGT+TGG - chr7_1:60042344-60042363 Msa1027580:three_prime_UTR 55.0%
ACTAAGCGGGGTCAGCTACA+TGG + chr7_1:60042981-60043000 None:intergenic 55.0%
ATGTAGCTGACCCCGCTTAG+TGG - chr7_1:60042980-60042999 Msa1027580:CDS 55.0%
TGTAGCTGACCCCGCTTAGT+GGG - chr7_1:60042981-60043000 Msa1027580:CDS 55.0%
TGACCCCGCTTAGTGGGATA+AGG - chr7_1:60042987-60043006 Msa1027580:CDS 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - chr7_1:60042992-60043011 Msa1027580:CDS 55.0%
GTTGCAACAGGGAGCAACCA+TGG - chr7_1:60044425-60044444 Msa1027580:intron 55.0%
CCGGCGGTGGAATCAAGAGT+TGG + chr7_1:60042021-60042040 None:intergenic 60.0%
!! GAGGAATGGTTCGGTGTCGC+CGG + chr7_1:60042040-60042059 None:intergenic 60.0%
AGTGCGGCGGAGGAATGGTT+CGG + chr7_1:60042049-60042068 None:intergenic 60.0%
!! GTGGTGTGTGGTGGATGGTG+CGG + chr7_1:60042077-60042096 None:intergenic 60.0%
! GAGTGGTGGTGTGTGGTGGA+TGG + chr7_1:60042082-60042101 None:intergenic 60.0%
! GGAAGAAATGGGTGGCGGTG+CGG + chr7_1:60042104-60042123 None:intergenic 60.0%
! GGCGTGACGGAAGAAATGGG+TGG + chr7_1:60042112-60042131 None:intergenic 60.0%
TGCGATGTGAGCTGGCGTGA+CGG + chr7_1:60042125-60042144 None:intergenic 60.0%
ACGAGAGAGAGCAGCAACGG+AGG - chr7_1:60042173-60042192 Msa1027580:three_prime_UTR 60.0%
!! GAATGGTTCGGTGTCGCCGG+CGG + chr7_1:60042037-60042056 None:intergenic 65.0%
!! GTGTGTGGTGGATGGTGCGG+CGG + chr7_1:60042074-60042093 None:intergenic 65.0%
! TGCGGAGTGGTGGTGTGTGG+TGG + chr7_1:60042086-60042105 None:intergenic 65.0%
! AAATGGGTGGCGGTGCGGAG+TGG + chr7_1:60042099-60042118 None:intergenic 65.0%
! CGGAGAGTGCGGCGGAGGAA+TGG + chr7_1:60042054-60042073 None:intergenic 70.0%
GGATGGTGCGGCGGAGAGTG+CGG + chr7_1:60042065-60042084 None:intergenic 70.0%
! CGGTGCGGAGTGGTGGTGTG+TGG + chr7_1:60042089-60042108 None:intergenic 70.0%
!! TGGTTCGGTGTCGCCGGCGG+TGG + chr7_1:60042034-60042053 None:intergenic 75.0%
! TGGTGCGGCGGAGAGTGCGG+CGG + chr7_1:60042062-60042081 None:intergenic 75.0%
! TGGGTGGCGGTGCGGAGTGG+TGG + chr7_1:60042096-60042115 None:intergenic 75.0%
GTGCGAGGAGCTGTGCGCCG+TGG - chr7_1:60043527-60043546 Msa1027580:intron 75.0%
!! TGCGGCGGAGAGTGCGGCGG+AGG + chr7_1:60042059-60042078 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 60041925 60045586 60041925 ID=Msa1027580;Name=Msa1027580
chr7_1 mRNA 60041925 60045586 60041925 ID=Msa1027580-mRNA-1;Parent=Msa1027580;Name=Msa1027580-mRNA-1;_AED=0.09;_eAED=0.09;_QI=78|1|1|1|0.75|1|5|456|367
chr7_1 exon 60041925 60042551 60041925 ID=Msa1027580-mRNA-1:exon:12348;Parent=Msa1027580-mRNA-1
chr7_1 exon 60042918 60043076 60042918 ID=Msa1027580-mRNA-1:exon:12347;Parent=Msa1027580-mRNA-1
chr7_1 exon 60043362 60043494 60043362 ID=Msa1027580-mRNA-1:exon:12346;Parent=Msa1027580-mRNA-1
chr7_1 exon 60043588 60043707 60043588 ID=Msa1027580-mRNA-1:exon:12345;Parent=Msa1027580-mRNA-1
chr7_1 exon 60044988 60045586 60044988 ID=Msa1027580-mRNA-1:exon:12344;Parent=Msa1027580-mRNA-1
chr7_1 five_prime_UTR 60045509 60045586 60045509 ID=Msa1027580-mRNA-1:five_prime_utr;Parent=Msa1027580-mRNA-1
chr7_1 CDS 60044988 60045508 60044988 ID=Msa1027580-mRNA-1:cds;Parent=Msa1027580-mRNA-1
chr7_1 CDS 60043588 60043707 60043588 ID=Msa1027580-mRNA-1:cds;Parent=Msa1027580-mRNA-1
chr7_1 CDS 60043362 60043494 60043362 ID=Msa1027580-mRNA-1:cds;Parent=Msa1027580-mRNA-1
chr7_1 CDS 60042918 60043076 60042918 ID=Msa1027580-mRNA-1:cds;Parent=Msa1027580-mRNA-1
chr7_1 CDS 60042381 60042551 60042381 ID=Msa1027580-mRNA-1:cds;Parent=Msa1027580-mRNA-1
chr7_1 three_prime_UTR 60041925 60042380 60041925 ID=Msa1027580-mRNA-1:three_prime_utr;Parent=Msa1027580-mRNA-1
Gene Sequence

>Msa1027580

ATGGACACTTCAAATCCAACTCTTGATTCCACCGCCGGCGACACCGAACCATTCCTCCGCCGCACTCTCCGCCGCACCATCCACCACACACCACCACTCCGCACCGCCACCCATTTCTTCCGTCACGCCAGCTCACATCGCATGATGCTCCGCGAACCATCAGTCCGTGTACGAGAGAGAGCAGCAACGGAGGTAGAAAACCGGCAGAGAGAGTGGGCTTATTCGAAACCCGTTGTAGCACTTGATATAGCGTGGAACTTGTCGTTTCTTGTTGTTAGTGTTGTCGTTTTGGGGTTGAGTAGTGAAGAGGAACCGTGTGTGCCTCTTAGGTTGTGGATTTTGGGTTACTTGTTGCAGGGGTTGGTTCATTCGGTGTGTGTTGTTTCGGAATTTAGAAGAAGGAGAAGGGGTAATCATTTGGAAGATGATGATGATTCTGTTTTGGAGAGTGGTTTACGGTGGCGTTTTAGTTCTGAGAGTGAATCTGATTTTGCTTCTGAGCATGAGAGTGAGGAAAATAGTATCATCAAGCACATAGAGTCTGCAAATACCATTCTATCATTCATATGGTGGATTCTTGGGTTCTACTGGGTAACTGTAGGTGGTCAGAGTTTGACAAAGGATTCACCTCAGCTTTACTGGCTATGTATTACATTTCTTGCTTTCGACGTTGTCATTGTAGTGATTTGTGTTGCTGTTGCATGTCTCATTGGAATTGCTGTTTGTTGTTGTCTTCCATGCATACTTGCTATTTTGTATGCAGTGGCTGATCAGGGAGCAACCATGGAAGAGATTGATCAGTTGCCAAAATATAAGTTTAGAATGATAAAGGAATCTAAGGAAGAAGGGGATGCCCAAGAATCATCCAGAGGAGTGATGATGGAATGTGACAGTGATACAGCTTCTGAGCATGTTATTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTTTCTGCCTATGATGATGGGGATGAACTTAGAGAACTTCCTTGCAACCACCATTTTCATTGTACATGCATCGACAAATGGCTGCTAATCTGTGCTACCTGCCCTCTCTGCAAATTTGACATTTTGAGCACTGATAACCCCAATCAAGAAGTTTGA
Protein sequence

>Msa1027580

MDTSNPTLDSTAGDTEPFLRRTLRRTIHHTPPLRTATHFFRHASSHRMMLREPSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRLWILGYLLQGLVHSVCVVSEFRRRRRGNHLEDDDDSVLESGLRWRFSSESESDFASEHESEENSIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVACLIGIAVCCCLPCILAILYAVADQGATMEEIDQLPKYKFRMIKESKEEGDAQESSRGVMMECDSDTASEHVIALEDAECCICLSAYDDGDELRELPCNHHFHCTCIDKWLLICATCPLCKFDILSTDNPNQEV*