AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1156320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156320 MtrunA17_Chr3g0104071 76.636 107 23 1 81 185 82 188 6.74e-53 172
Msa1156320 MtrunA17_Chr5g0429521 74.468 94 23 1 92 185 81 173 1.21e-43 147
Msa1156320 MtrunA17_Chr7g0241761 62.245 98 32 2 91 185 86 181 9.75e-35 124
Msa1156320 MtrunA17_Chr5g0436501 50.000 112 50 2 74 185 61 166 6.68e-29 108
Msa1156320 MtrunA17_Chr1g0162081 66.102 59 20 0 127 185 105 163 3.01e-24 97.1
Msa1156320 MtrunA17_Chr4g0059701 70.909 55 16 0 131 185 71 125 8.95e-24 95.5
Msa1156320 MtrunA17_Chr5g0415191 78.182 55 10 1 131 185 91 143 4.04e-23 94.4
Msa1156320 MtrunA17_Chr4g0062741 75.510 49 12 0 137 185 131 179 6.28e-23 93.6
Msa1156320 MtrunA17_Chr8g0389241 72.000 50 14 0 136 185 97 146 2.14e-21 89.0
Msa1156320 MtrunA17_Chr1g0210471 71.429 49 14 0 137 185 117 165 4.73e-21 87.4
Msa1156320 MtrunA17_Chr6g0488471 72.917 48 13 0 138 185 91 138 1.22e-20 87.0
Msa1156320 MtrunA17_Chr2g0331031 74.468 47 12 0 139 185 104 150 1.41e-20 87.8
Msa1156320 MtrunA17_Chr4g0055931 60.606 66 24 1 120 185 73 136 2.61e-20 86.7
Msa1156320 MtrunA17_Chr5g0440731 38.889 90 54 1 97 185 57 146 1.31e-15 73.6
Msa1156320 MtrunA17_Chr3g0135671 64.444 45 16 0 141 185 88 132 1.34e-15 72.4
Msa1156320 MtrunA17_Chr6g0452791 66.667 42 14 0 144 185 80 121 2.75e-15 70.5
Msa1156320 MtrunA17_Chr3g0092621 64.286 42 15 0 144 185 84 125 1.56e-14 68.6
Msa1156320 MtrunA17_Chr5g0409831 52.542 59 19 1 127 185 69 118 6.49e-14 67.8
Msa1156320 MtrunA17_Chr5g0409841 40.000 95 51 3 97 185 39 133 1.11e-13 67.4
Msa1156320 MtrunA17_Chr5g0440741 62.500 40 15 0 146 185 102 141 1.55e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156320 AT5G58900.1 62.245 98 32 3 92 185 86 182 8.11e-34 122
Msa1156320 AT2G38090.1 52.830 106 32 3 93 185 82 182 2.59e-29 110
Msa1156320 AT3G11280.2 49.123 114 44 3 74 185 67 168 2.56e-27 104
Msa1156320 AT3G11280.1 49.123 114 44 3 74 185 67 168 2.56e-27 104
Msa1156320 AT5G05790.2 50.538 93 42 1 93 185 84 172 1.94e-24 97.4
Msa1156320 AT5G05790.1 50.538 93 42 1 93 185 84 172 1.94e-24 97.4
Msa1156320 AT5G08520.1 50.562 89 34 2 107 185 71 159 2.66e-23 94.7
Msa1156320 AT5G01200.1 50.000 106 38 4 93 185 84 187 5.98e-23 93.2
Msa1156320 AT1G49010.1 75.510 49 12 0 137 185 127 175 1.14e-22 93.2
Msa1156320 AT5G04760.1 77.551 49 11 0 137 185 92 140 1.73e-22 90.9
Msa1156320 AT1G74840.2 80.851 47 9 0 139 185 91 137 2.67e-21 88.2
Msa1156320 AT1G74840.1 80.851 47 9 0 139 185 91 137 3.56e-21 88.6
Msa1156320 AT1G70000.1 70.909 55 14 1 131 185 87 139 5.00e-21 88.2
Msa1156320 AT1G70000.2 70.909 55 14 1 131 185 87 139 5.00e-21 88.2
Msa1156320 AT3G16350.1 59.091 66 27 0 120 185 113 178 7.80e-21 89.4
Msa1156320 AT5G47390.1 66.667 54 18 0 132 185 84 137 1.50e-20 88.2
Msa1156320 AT1G19000.2 73.913 46 12 0 140 185 98 143 3.03e-19 83.6
Msa1156320 AT1G19000.1 73.913 46 12 0 140 185 98 143 3.03e-19 83.6
Msa1156320 AT5G56840.1 60.714 56 20 1 130 185 79 132 1.10e-18 81.3
Msa1156320 AT5G61620.1 48.611 72 33 1 114 185 82 149 3.37e-17 78.6
Msa1156320 AT5G23650.1 64.583 48 17 0 138 185 114 161 2.39e-15 73.6
Msa1156320 AT3G10580.2 58.696 46 19 0 140 185 91 136 2.57e-14 69.7
Msa1156320 AT3G10580.1 58.696 46 19 0 140 185 91 136 3.46e-14 69.7
Msa1156320 AT4G09450.1 54.545 55 25 0 131 185 78 132 7.12e-14 67.8

Find 135 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCATTCTGTTATATTT+TGG 0.133364 7_4:+44620890 Msa1156320:three_prime_UTR
AGAAGAATTCACCAAATTTA+AGG 0.151774 7_4:-44619145 None:intergenic
CATTTACAGGTTATTTCTAT+TGG 0.190801 7_4:+44619550 Msa1156320:intron
TTTACCCTTTACCTTAAATT+TGG 0.205212 7_4:+44619134 Msa1156320:CDS
CCATAAGTCTAATTTCTTAA+AGG 0.208233 7_4:-44620063 None:intergenic
CTGTTTGTCTGTTGAATTGC+TGG 0.217535 7_4:+44621090 Msa1156320:three_prime_UTR
AGAAGACAACTTTACTATTA+TGG 0.222133 7_4:+44619773 Msa1156320:three_prime_UTR
ACTTCTTCCACTTACATTCT+TGG 0.230378 7_4:+44620408 Msa1156320:three_prime_UTR
TCTATCAGTGAGAAGGAAAT+AGG 0.244683 7_4:+44620096 Msa1156320:three_prime_UTR
GACTATATTACTTATGATAT+TGG 0.249139 7_4:+44620564 Msa1156320:three_prime_UTR
CTTTCTTTATGTGAGCAATT+TGG 0.253206 7_4:+44621486 Msa1156320:three_prime_UTR
AGGTCAATCCTTATCTTCTT+TGG 0.263525 7_4:-44621179 None:intergenic
CATTGGTAATAGATAATAAA+TGG 0.280012 7_4:-44619830 None:intergenic
GTTACCTAAAACTAAGTTAA+AGG 0.280475 7_4:-44620237 None:intergenic
TCACATACTTCTAATATAAA+AGG 0.284969 7_4:-44620030 None:intergenic
AAATGCCTATGAATAAAATT+TGG 0.295175 7_4:+44618914 Msa1156320:CDS
TTTCCTTCTCACTGATAGAT+AGG 0.306885 7_4:-44620092 None:intergenic
GACATTGTTCACTAACTATT+AGG 0.311926 7_4:-44621769 None:intergenic
GTGTTGTCCTTATGCTTAAA+AGG 0.318412 7_4:+44619710 Msa1156320:three_prime_UTR
TTCACCAAATTTAAGGTAAA+GGG 0.322539 7_4:-44619138 None:intergenic
AGTAAAGTTGTCTTCTATAA+AGG 0.334990 7_4:-44619766 None:intergenic
TGTAAGTGGAAGAAGTTAGA+AGG 0.335418 7_4:-44620401 None:intergenic
ATTTACAGGTTATTTCTATT+GGG 0.335592 7_4:+44619551 Msa1156320:intron
CAAAGGGATGCTTAGCAGTT+AGG 0.338816 7_4:-44621370 None:intergenic
TTCGATTTGAGCTTTAATAA+AGG 0.344006 7_4:+44621646 Msa1156320:three_prime_UTR
TTTCGGCGGCACTTCAATTT+GGG 0.347697 7_4:+44618095 Msa1156320:CDS
CCTTTAAGAAATTAGACTTA+TGG 0.350563 7_4:+44620063 Msa1156320:three_prime_UTR
TTATATGGAATTACATGGTC+AGG 0.354679 7_4:+44620953 Msa1156320:three_prime_UTR
ACTGCAAAGAGAGGCTCTTC+TGG 0.358491 7_4:+44619192 Msa1156320:CDS
AACTCAAAATCTCCAGTCTT+AGG 0.358494 7_4:+44619877 Msa1156320:three_prime_UTR
CGAATCAGTAGGGCATATTC+TGG 0.361470 7_4:-44621237 None:intergenic
AAAGTTATGATAGTCCTTGA+TGG 0.367359 7_4:-44621313 None:intergenic
TATACCAAAACATGCATATC+TGG 0.368918 7_4:-44620852 None:intergenic
ACAAACACCGCTTAAATATA+CGG 0.369832 7_4:-44618225 None:intergenic
GCCGGTTTAATTCTAACTTC+TGG 0.383349 7_4:+44619096 Msa1156320:CDS
ATGAAGAACATTGTTGTTGC+GGG 0.388908 7_4:+44620667 Msa1156320:three_prime_UTR
CCTCTCTTCCTTTCCTGATC+AGG 0.390701 7_4:-44619222 None:intergenic
TGCAGTAATTATGATGGGTT+TGG 0.390905 7_4:+44620821 Msa1156320:three_prime_UTR
CTTTGGGAATTTATAGGCTC+AGG 0.391484 7_4:+44620502 Msa1156320:three_prime_UTR
ATTCACCAAATTTAAGGTAA+AGG 0.399264 7_4:-44619139 None:intergenic
TTGTGCCTTCAGGCTTGTAT+TGG 0.401702 7_4:-44620714 None:intergenic
GTGACCAGATATGCATGTTT+TGG 0.403205 7_4:+44620848 Msa1156320:three_prime_UTR
GCCCTACTGATTCGCTCAAC+TGG 0.407427 7_4:+44621246 Msa1156320:three_prime_UTR
ACCAGAAGTTAGAATTAAAC+CGG 0.417297 7_4:-44619097 None:intergenic
ACTATTTGGGGTATCTTAGC+GGG 0.417455 7_4:+44620752 Msa1156320:three_prime_UTR
GTGAATTCTTCTGTTTATGA+TGG 0.418373 7_4:+44619156 Msa1156320:CDS
GGAATTACATGGTCAGGGCT+TGG 0.425357 7_4:+44620959 Msa1156320:three_prime_UTR
AATATACATGATAGCATAGT+AGG 0.426250 7_4:-44619806 None:intergenic
CAACTCTCTAAATCCATGAT+AGG 0.430467 7_4:-44621155 None:intergenic
CTATCAGTGAGAAGGAAATA+GGG 0.440147 7_4:+44620097 Msa1156320:three_prime_UTR
TACTATTTGGGGTATCTTAG+CGG 0.440195 7_4:+44620751 Msa1156320:three_prime_UTR
AGAGTTGTCCAAAGAAGATA+AGG 0.446445 7_4:+44621171 Msa1156320:three_prime_UTR
ATCTCAGATTGCTCCATCTT+CGG 0.448460 7_4:+44621834 Msa1156320:three_prime_UTR
GTTGTCTTCTATAAAGGAAA+AGG 0.458075 7_4:-44619760 None:intergenic
ATTGGCACGAGCTCATGATT+AGG 0.460377 7_4:+44620582 Msa1156320:three_prime_UTR
ACTTAGTAAATGCAATTTCA+CGG 0.460602 7_4:+44621045 Msa1156320:three_prime_UTR
AGCTGACACATTACCGAAGA+TGG 0.465963 7_4:-44621847 None:intergenic
AAAAGGAGTAAATGTCTTGA+AGG 0.467418 7_4:+44620992 Msa1156320:three_prime_UTR
GCTGGCTGTATGTATTTCAA+TGG 0.469509 7_4:+44621108 Msa1156320:three_prime_UTR
AGTAAATGTCTTGAAGGTTA+AGG 0.470865 7_4:+44620998 Msa1156320:three_prime_UTR
TTTCTTGCAGTAATTATGAT+GGG 0.473271 7_4:+44620816 Msa1156320:three_prime_UTR
AGCGAAATGCAGAGAACAAA+AGG 0.473493 7_4:-44618266 None:intergenic
TTCTGGTAGATCTCCTGATC+AGG 0.477520 7_4:+44619209 Msa1156320:CDS
TCATCTTACTACAATATCAT+TGG 0.478148 7_4:-44619847 None:intergenic
TATTTCTATTGGGTCTGAAA+AGG 0.478616 7_4:+44619561 Msa1156320:CDS
AAAGGTATGGAAAAGGTGAT+TGG 0.479933 7_4:+44619579 Msa1156320:CDS
GATTCAACCAAGAATGTAAG+TGG 0.487566 7_4:-44620415 None:intergenic
AAGAATAAAGTAATGGCAAA+GGG 0.487601 7_4:-44621386 None:intergenic
GAAAGCGTTGCAAGACAGAT+AGG 0.491188 7_4:-44620781 None:intergenic
CAAAATGTGTTGGAGGCTCA+TGG 0.496406 7_4:+44620542 Msa1156320:three_prime_UTR
AAAATTGAATTTGAAGGCGG+TGG 0.497636 7_4:+44619676 Msa1156320:CDS
CTATTGGGTCTGAAAAGGTA+TGG 0.500766 7_4:+44619566 Msa1156320:CDS
TTCCTTCTCACTGATAGATA+GGG 0.500984 7_4:-44620091 None:intergenic
GCATAAGGACAACACTTACA+TGG 0.502150 7_4:-44619702 None:intergenic
TGTTCTTCATATTCAATGAC+CGG 0.506977 7_4:-44620654 None:intergenic
CTTTATGTGAGCAATTTGGT+TGG 0.509483 7_4:+44621490 Msa1156320:three_prime_UTR
AAAAGTTGGTTTACTATTTG+GGG 0.510466 7_4:+44620740 Msa1156320:three_prime_UTR
GAGATGAAAGTGCAATATGA+TGG 0.512012 7_4:+44621586 Msa1156320:three_prime_UTR
ATTTCTCCATTCTGATCACC+AGG 0.516162 7_4:-44618450 None:intergenic
TTTCTAAAAGATATAGTCAA+AGG 0.517643 7_4:-44620617 None:intergenic
TAATAAAGGATAAAAGATGT+TGG 0.518210 7_4:+44621660 Msa1156320:three_prime_UTR
ACAACTTTACTATTATGGTA+TGG 0.520830 7_4:+44619778 Msa1156320:three_prime_UTR
GTGATTGGAGAAACATTTCA+AGG 0.523020 7_4:+44619594 Msa1156320:CDS
TATGTGAAAGTAGCCTATCA+TGG 0.526059 7_4:+44621142 Msa1156320:three_prime_UTR
TCAAAATCTCCAGTCTTAGG+AGG 0.527252 7_4:+44619880 Msa1156320:three_prime_UTR
AAATTGCATTTACTAAGTGA+TGG 0.529246 7_4:-44621040 None:intergenic
TTCTAAAAGATATAGTCAAA+GGG 0.534640 7_4:-44620616 None:intergenic
TATATGGAATTACATGGTCA+GGG 0.546629 7_4:+44620954 Msa1156320:three_prime_UTR
AAAGAATAAAGTAATGGCAA+AGG 0.548815 7_4:-44621387 None:intergenic
TAGTAAATGCAAAAGAGATA+AGG 0.549691 7_4:-44620920 None:intergenic
GTAAGTGGAAGAAGTTAGAA+GGG 0.552516 7_4:-44620400 None:intergenic
AGAGGAATTACTGCAAAGAG+AGG 0.554018 7_4:+44619183 Msa1156320:CDS
TATTGTTGTTGTAGTGAACC+TGG 0.555429 7_4:+44618432 Msa1156320:CDS
GGTCTGAAAAGGTATGGAAA+AGG 0.561303 7_4:+44619572 Msa1156320:CDS
ATACAGTCATATCACGGAGA+TGG 0.566257 7_4:-44621696 None:intergenic
ATGTGGGATATGATGAAAGC+AGG 0.568912 7_4:+44621610 Msa1156320:three_prime_UTR
TGTTGTTGCGGGATTTGACA+TGG 0.569183 7_4:+44620678 Msa1156320:three_prime_UTR
CTTCTCACTGATAGATAGGG+TGG 0.570585 7_4:-44620088 None:intergenic
AAGTGCAATATGATGGGATG+TGG 0.571713 7_4:+44621593 Msa1156320:three_prime_UTR
AACAGAATGCAAGAGGGAGT+TGG 0.573733 7_4:-44620881 None:intergenic
AAAATATAACAGAATGCAAG+AGG 0.576489 7_4:-44620888 None:intergenic
GATAGAAAAGAATAAAGTAA+TGG 0.577757 7_4:-44621393 None:intergenic
ACCAGTTGAGCGAATCAGTA+GGG 0.578694 7_4:-44621247 None:intergenic
TAAAAGATGTTGGAATGTAG+TGG 0.580988 7_4:+44621670 Msa1156320:three_prime_UTR
TCATGGCTAGACACTTGTGT+TGG 0.584548 7_4:-44619638 None:intergenic
CACCCTATCTATCAGTGAGA+AGG 0.585213 7_4:+44620089 Msa1156320:three_prime_UTR
AGTGCAATATGATGGGATGT+GGG 0.589936 7_4:+44621594 Msa1156320:three_prime_UTR
GAAGAGATTGAAATAATAGA+CGG 0.590661 7_4:+44620200 Msa1156320:three_prime_UTR
AAAGGAAGAGAGGTGTGCCA+TGG 0.593587 7_4:+44619232 Msa1156320:CDS
AGGCTACTTTCACATACTTG+TGG 0.595394 7_4:-44621135 None:intergenic
ACATGTGTAATATGAAATGA+AGG 0.595484 7_4:-44621417 None:intergenic
AATTTGTCAGATAATGGGGC+CGG 0.597837 7_4:+44618060 None:intergenic
TATGAAGAACATTGTTGTTG+CGG 0.599936 7_4:+44620666 Msa1156320:three_prime_UTR
GTAGATCTCCTGATCAGGAA+AGG 0.600023 7_4:+44619214 Msa1156320:CDS
ATTTGACATGGACTATACTC+TGG 0.601944 7_4:+44620690 Msa1156320:three_prime_UTR
AGATGAAAGTGCAATATGAT+GGG 0.605901 7_4:+44621587 Msa1156320:three_prime_UTR
AGTGAACCTGGTGATCAGAA+TGG 0.607677 7_4:+44618444 Msa1156320:CDS
ACTATTAGGTACATAGAAGT+CGG 0.607942 7_4:-44621755 None:intergenic
AAAAGATATAGTCAAAGGGA+TGG 0.609408 7_4:-44620612 None:intergenic
CAGTCATATCACGGAGATGG+AGG 0.610698 7_4:-44621693 None:intergenic
CTATTTGGGGTATCTTAGCG+GGG 0.612934 7_4:+44620753 Msa1156320:three_prime_UTR
ATATCCTCAAGTATTTCCAC+AGG 0.614368 7_4:-44621199 None:intergenic
TTGACCTGTGGAAATACTTG+AGG 0.621259 7_4:+44621195 Msa1156320:three_prime_UTR
AATGTAATACAGTCATATCA+CGG 0.626250 7_4:-44621702 None:intergenic
CAAAATCTCCAGTCTTAGGA+GGG 0.633094 7_4:+44619881 Msa1156320:three_prime_UTR
TTGTCCTTATGCTTAAAAGG+TGG 0.636379 7_4:+44619713 Msa1156320:three_prime_UTR
CTGGTCCAATACAAGCCTGA+AGG 0.640349 7_4:+44620709 Msa1156320:three_prime_UTR
CCTGATCAGGAAAGGAAGAG+AGG 0.641681 7_4:+44619222 Msa1156320:CDS
AATGCAGAGAACAAAAGGAG+TGG 0.643722 7_4:-44618261 None:intergenic
AACCAGTTGAGCGAATCAGT+AGG 0.655358 7_4:-44621248 None:intergenic
AGAAGATAAGGATTGACCTG+TGG 0.666013 7_4:+44621183 Msa1156320:three_prime_UTR
TCTCTCGCCGTATATTTAAG+CGG 0.666816 7_4:+44618218 Msa1156320:CDS
AATAGATGTGAATTCAACGA+TGG 0.667812 7_4:-44618408 None:intergenic
AAATATAACAGAATGCAAGA+GGG 0.685221 7_4:-44620887 None:intergenic
TAGTATCATAGAGTGTGACA+AGG 0.714772 7_4:+44620142 Msa1156320:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAATTAAATTTTTTAAGAT+AGG - chr7_4:44619741-44619760 None:intergenic 10.0%
!!! AATAAGATTATTTTTACTTT+GGG + chr7_4:44620486-44620505 Msa1156320:three_prime_UTR 10.0%
!!! AAATTCAATTTTTTACTTGT+TGG - chr7_4:44619668-44619687 None:intergenic 15.0%
!! AAGTAAAAAATTGAATTTGA+AGG + chr7_4:44619670-44619689 Msa1156320:CDS 15.0%
!! CAAAGTAAAAATAATCTTAT+TGG - chr7_4:44620487-44620506 None:intergenic 15.0%
!!! CAATAAGATTATTTTTACTT+TGG + chr7_4:44620485-44620504 Msa1156320:three_prime_UTR 15.0%
!!! TACTAAGTTGATTTTTTATA+TGG + chr7_4:44620938-44620957 Msa1156320:three_prime_UTR 15.0%
!!! ATTTTTTATATGGAATTACA+TGG + chr7_4:44620948-44620967 Msa1156320:three_prime_UTR 15.0%
!! AAAACAGCAGTAAAAAAATT+AGG - chr7_4:44618516-44618535 None:intergenic 20.0%
!! TTGGCATATAAATTTGAATA+AGG - chr7_4:44618764-44618783 None:intergenic 20.0%
!!! TAACAACTAAAACTGATTTT+GGG - chr7_4:44618813-44618832 None:intergenic 20.0%
!! AAATGCCTATGAATAAAATT+TGG + chr7_4:44618914-44618933 Msa1156320:CDS 20.0%
!!! AAACACCAAATTTTATTCAT+AGG - chr7_4:44618922-44618941 None:intergenic 20.0%
!!! TAATTATTTAAGTTGTTGAG+CGG + chr7_4:44619494-44619513 Msa1156320:intron 20.0%
!! TTTGATGAAAATTCATTTAC+AGG + chr7_4:44619537-44619556 Msa1156320:intron 20.0%
!!! ATTTACAGGTTATTTCTATT+GGG + chr7_4:44619551-44619570 Msa1156320:intron 20.0%
!! TAAAAAATTGAATTTGAAGG+CGG + chr7_4:44619673-44619692 Msa1156320:CDS 20.0%
!!! CATTGGTAATAGATAATAAA+TGG - chr7_4:44619833-44619852 None:intergenic 20.0%
!! TCACATACTTCTAATATAAA+AGG - chr7_4:44620033-44620052 None:intergenic 20.0%
!!! TTTAACTTAGTTTTAGGTAA+CGG + chr7_4:44620239-44620258 Msa1156320:three_prime_UTR 20.0%
!!! TTTTTACTTTGGGAATTTAT+AGG + chr7_4:44620496-44620515 Msa1156320:three_prime_UTR 20.0%
!! GACTATATTACTTATGATAT+TGG + chr7_4:44620564-44620583 Msa1156320:three_prime_UTR 20.0%
!!! TTCTAAAAGATATAGTCAAA+GGG - chr7_4:44620619-44620638 None:intergenic 20.0%
!!! TTTCTAAAAGATATAGTCAA+AGG - chr7_4:44620620-44620639 None:intergenic 20.0%
!!! AGAAACATATATTTTGTAAC+CGG + chr7_4:44620635-44620654 Msa1156320:three_prime_UTR 20.0%
!!! TAAAAAGTTGGTTTACTATT+TGG + chr7_4:44620738-44620757 Msa1156320:three_prime_UTR 20.0%
!!! AAAAAGTTGGTTTACTATTT+GGG + chr7_4:44620739-44620758 Msa1156320:three_prime_UTR 20.0%
!! GATAGAAAAGAATAAAGTAA+TGG - chr7_4:44621396-44621415 None:intergenic 20.0%
!! TAATAAAGGATAAAAGATGT+TGG + chr7_4:44621660-44621679 Msa1156320:three_prime_UTR 20.0%
!! ATTCGCCTTTCATTTTATAT+GGG + chr7_4:44618145-44618164 Msa1156320:intron 25.0%
! CAAAACCCATATAAAATGAA+AGG - chr7_4:44618153-44618172 None:intergenic 25.0%
! CAATTTACCAAGAATTGATA+TGG - chr7_4:44618613-44618632 None:intergenic 25.0%
! ACCATTATCTACACATTTAA+TGG + chr7_4:44618722-44618741 Msa1156320:intron 25.0%
! CCATTATCTACACATTTAAT+GGG + chr7_4:44618723-44618742 Msa1156320:intron 25.0%
! ATCACAACGTTATAAGAATT+TGG - chr7_4:44618783-44618802 None:intergenic 25.0%
!!! GTAACAACTAAAACTGATTT+TGG - chr7_4:44618814-44618833 None:intergenic 25.0%
!! TTGTTACACTACTTGATTTT+GGG + chr7_4:44618827-44618846 Msa1156320:intron 25.0%
! GTAATGTGAAGAATCATATA+AGG + chr7_4:44619044-44619063 Msa1156320:intron 25.0%
! TTTACCCTTTACCTTAAATT+TGG + chr7_4:44619134-44619153 Msa1156320:CDS 25.0%
!! TTCACCAAATTTAAGGTAAA+GGG - chr7_4:44619141-44619160 None:intergenic 25.0%
!! ATTCACCAAATTTAAGGTAA+AGG - chr7_4:44619142-44619161 None:intergenic 25.0%
! AGAAGAATTCACCAAATTTA+AGG - chr7_4:44619148-44619167 None:intergenic 25.0%
! ATATGTAGTTATTGAGAGTT+AGG + chr7_4:44619383-44619402 Msa1156320:intron 25.0%
!!! TGGTCTTTTACATTTTGATA+TGG + chr7_4:44619424-44619443 Msa1156320:intron 25.0%
!!! CATTTACAGGTTATTTCTAT+TGG + chr7_4:44619550-44619569 Msa1156320:intron 25.0%
! AGTAAAGTTGTCTTCTATAA+AGG - chr7_4:44619769-44619788 None:intergenic 25.0%
! AGAAGACAACTTTACTATTA+TGG + chr7_4:44619773-44619792 Msa1156320:three_prime_UTR 25.0%
! ACAACTTTACTATTATGGTA+TGG + chr7_4:44619778-44619797 Msa1156320:three_prime_UTR 25.0%
! AATATACATGATAGCATAGT+AGG - chr7_4:44619809-44619828 None:intergenic 25.0%
! TCATCTTACTACAATATCAT+TGG - chr7_4:44619850-44619869 None:intergenic 25.0%
! CCATAAGTCTAATTTCTTAA+AGG - chr7_4:44620066-44620085 None:intergenic 25.0%
!! CCTTTAAGAAATTAGACTTA+TGG + chr7_4:44620063-44620082 Msa1156320:three_prime_UTR 25.0%
! GAAGAGATTGAAATAATAGA+CGG + chr7_4:44620200-44620219 Msa1156320:three_prime_UTR 25.0%
!!! TAGTCCTTTAACTTAGTTTT+AGG + chr7_4:44620233-44620252 Msa1156320:three_prime_UTR 25.0%
! GTTACCTAAAACTAAGTTAA+AGG - chr7_4:44620240-44620259 None:intergenic 25.0%
! ACGATGAAAAAGAACAAATA+CGG - chr7_4:44620297-44620316 None:intergenic 25.0%
!! AAAAGTTGGTTTACTATTTG+GGG + chr7_4:44620740-44620759 Msa1156320:three_prime_UTR 25.0%
!! TTTTCTTGCAGTAATTATGA+TGG + chr7_4:44620815-44620834 Msa1156320:three_prime_UTR 25.0%
! TTTCTTGCAGTAATTATGAT+GGG + chr7_4:44620816-44620835 Msa1156320:three_prime_UTR 25.0%
! AAATATAACAGAATGCAAGA+GGG - chr7_4:44620890-44620909 None:intergenic 25.0%
! AAAATATAACAGAATGCAAG+AGG - chr7_4:44620891-44620910 None:intergenic 25.0%
!! TCTTGCATTCTGTTATATTT+TGG + chr7_4:44620890-44620909 Msa1156320:three_prime_UTR 25.0%
! TAGTAAATGCAAAAGAGATA+AGG - chr7_4:44620923-44620942 None:intergenic 25.0%
! AAATTGCATTTACTAAGTGA+TGG - chr7_4:44621043-44621062 None:intergenic 25.0%
! ACTTAGTAAATGCAATTTCA+CGG + chr7_4:44621045-44621064 Msa1156320:three_prime_UTR 25.0%
! TCAAAAAAGTTGTTCTTTAC+AGG - chr7_4:44621292-44621311 None:intergenic 25.0%
! AAGAATAAAGTAATGGCAAA+GGG - chr7_4:44621389-44621408 None:intergenic 25.0%
! AAAGAATAAAGTAATGGCAA+AGG - chr7_4:44621390-44621409 None:intergenic 25.0%
! ACATGTGTAATATGAAATGA+AGG - chr7_4:44621420-44621439 None:intergenic 25.0%
!!! TTTGTGTGTTTTTGTTAAGT+AGG + chr7_4:44621513-44621532 Msa1156320:three_prime_UTR 25.0%
!! TTCGATTTGAGCTTTAATAA+AGG + chr7_4:44621646-44621665 Msa1156320:three_prime_UTR 25.0%
! AATGTAATACAGTCATATCA+CGG - chr7_4:44621705-44621724 None:intergenic 25.0%
!!! AACAATGTCTTTTTTCTTCA+GGG + chr7_4:44621783-44621802 Msa1156320:three_prime_UTR 25.0%
! GATTCGCCTTTCATTTTATA+TGG + chr7_4:44618144-44618163 Msa1156320:intron 30.0%
!!! TTGCAGTTTTGTTTTGTTGT+TGG + chr7_4:44618187-44618206 Msa1156320:intron 30.0%
!!! AGTTTTGTTTTGTTGTTGGT+GGG + chr7_4:44618191-44618210 Msa1156320:intron 30.0%
ACAAACACCGCTTAAATATA+CGG - chr7_4:44618228-44618247 None:intergenic 30.0%
AATAGATGTGAATTCAACGA+TGG - chr7_4:44618411-44618430 None:intergenic 30.0%
AGCAAGAACACAATATTAGA+AGG - chr7_4:44618545-44618564 None:intergenic 30.0%
AAAGAATGAAGAATAGCAAG+AGG - chr7_4:44618579-44618598 None:intergenic 30.0%
CCCATTAAATGTGTAGATAA+TGG - chr7_4:44618726-44618745 None:intergenic 30.0%
! GTTGTTACACTACTTGATTT+TGG + chr7_4:44618826-44618845 Msa1156320:intron 30.0%
! TGTTACACTACTTGATTTTG+GGG + chr7_4:44618828-44618847 Msa1156320:intron 30.0%
AGTAGGGCTAAAATTAGTAA+TGG + chr7_4:44618863-44618882 Msa1156320:intron 30.0%
GTAGGGCTAAAATTAGTAAT+GGG + chr7_4:44618864-44618883 Msa1156320:intron 30.0%
ATGGGAATAAAATGCATTGT+AGG + chr7_4:44618882-44618901 Msa1156320:intron 30.0%
! TGTTTAGCATCACATGTTTT+TGG + chr7_4:44618937-44618956 Msa1156320:CDS 30.0%
! AAAGTATCTGAAATGATACC+TGG + chr7_4:44619011-44619030 Msa1156320:intron 30.0%
GATGTTTGTAATATAGAAGC+CGG + chr7_4:44619078-44619097 Msa1156320:intron 30.0%
ACCAGAAGTTAGAATTAAAC+CGG - chr7_4:44619100-44619119 None:intergenic 30.0%
GTGAATTCTTCTGTTTATGA+TGG + chr7_4:44619156-44619175 Msa1156320:CDS 30.0%
!!! TCTGTTTATGATGGTTTTAG+AGG + chr7_4:44619165-44619184 Msa1156320:CDS 30.0%
! TTATGTTTTTCTTCAGTCCA+TGG - chr7_4:44619252-44619271 None:intergenic 30.0%
TTCCAAACATGCACTAATAT+CGG - chr7_4:44619333-44619352 None:intergenic 30.0%
! TATTTCTATTGGGTCTGAAA+AGG + chr7_4:44619561-44619580 Msa1156320:CDS 30.0%
! CAAGGAATTTTGTGATCATT+AGG + chr7_4:44619612-44619631 Msa1156320:CDS 30.0%
GTTGTCTTCTATAAAGGAAA+AGG - chr7_4:44619763-44619782 None:intergenic 30.0%
!! TGACTGAACTTCATTTTAGT+AGG + chr7_4:44619921-44619940 Msa1156320:three_prime_UTR 30.0%
GAAAAAGAACAAATACGGAA+AGG - chr7_4:44620292-44620311 None:intergenic 30.0%
AAAAGATATAGTCAAAGGGA+TGG - chr7_4:44620615-44620634 None:intergenic 30.0%
TGTTCTTCATATTCAATGAC+CGG - chr7_4:44620657-44620676 None:intergenic 30.0%
! TATGAAGAACATTGTTGTTG+CGG + chr7_4:44620666-44620685 Msa1156320:three_prime_UTR 30.0%
!! AACTTTTTAATTGTGCCTTC+AGG - chr7_4:44620727-44620746 None:intergenic 30.0%
! TGAAGGCACAATTAAAAAGT+TGG + chr7_4:44620726-44620745 Msa1156320:three_prime_UTR 30.0%
TATACCAAAACATGCATATC+TGG - chr7_4:44620855-44620874 None:intergenic 30.0%
TTATATGGAATTACATGGTC+AGG + chr7_4:44620953-44620972 Msa1156320:three_prime_UTR 30.0%
TATATGGAATTACATGGTCA+GGG + chr7_4:44620954-44620973 Msa1156320:three_prime_UTR 30.0%
AAAAGGAGTAAATGTCTTGA+AGG + chr7_4:44620992-44621011 Msa1156320:three_prime_UTR 30.0%
AGTAAATGTCTTGAAGGTTA+AGG + chr7_4:44620998-44621017 Msa1156320:three_prime_UTR 30.0%
!!! ACAACTTTTTTGAACCATCA+AGG + chr7_4:44621299-44621318 Msa1156320:three_prime_UTR 30.0%
AAAGTTATGATAGTCCTTGA+TGG - chr7_4:44621316-44621335 None:intergenic 30.0%
CTTTCTTTATGTGAGCAATT+TGG + chr7_4:44621486-44621505 Msa1156320:three_prime_UTR 30.0%
! AGATGAAAGTGCAATATGAT+GGG + chr7_4:44621587-44621606 Msa1156320:three_prime_UTR 30.0%
TAAAAGATGTTGGAATGTAG+TGG + chr7_4:44621670-44621689 Msa1156320:three_prime_UTR 30.0%
ACTATTAGGTACATAGAAGT+CGG - chr7_4:44621758-44621777 None:intergenic 30.0%
GACATTGTTCACTAACTATT+AGG - chr7_4:44621772-44621791 None:intergenic 30.0%
!!! GAACAATGTCTTTTTTCTTC+AGG + chr7_4:44621782-44621801 Msa1156320:three_prime_UTR 30.0%
! GCCGGTACTTGAAAAATTTT+CGG + chr7_4:44618078-44618097 Msa1156320:CDS 35.0%
!!! GCCGAAAATTTTTCAAGTAC+CGG - chr7_4:44618082-44618101 None:intergenic 35.0%
! GGTACTTGAAAAATTTTCGG+CGG + chr7_4:44618081-44618100 Msa1156320:CDS 35.0%
TTGGGTGCATAATTTCTTTG+TGG + chr7_4:44618113-44618132 Msa1156320:intron 35.0%
GTGCATAATTTCTTTGTGGT+GGG + chr7_4:44618117-44618136 Msa1156320:intron 35.0%
TGCATAATTTCTTTGTGGTG+GGG + chr7_4:44618118-44618137 Msa1156320:intron 35.0%
!!! CAGTTTTGTTTTGTTGTTGG+TGG + chr7_4:44618190-44618209 Msa1156320:intron 35.0%
! GTGCTGTTCTTTGATCATAA+TGG + chr7_4:44618297-44618316 Msa1156320:intron 35.0%
! TATTGTTGTTGTAGTGAACC+TGG + chr7_4:44618432-44618451 Msa1156320:CDS 35.0%
ACCAAGAATTGATATGGTTG+AGG - chr7_4:44618607-44618626 None:intergenic 35.0%
AACATGTATTGCTCATATCG+TGG + chr7_4:44618985-44619004 Msa1156320:intron 35.0%
AACCGATATTAGTGCATGTT+TGG + chr7_4:44619328-44619347 Msa1156320:intron 35.0%
! TTAGTGCATGTTTGGAATCT+AGG + chr7_4:44619336-44619355 Msa1156320:intron 35.0%
GAGAGTTAGGTATTTCCTAA+TGG + chr7_4:44619396-44619415 Msa1156320:intron 35.0%
TAAAAGACCACAACACCATT+AGG - chr7_4:44619414-44619433 None:intergenic 35.0%
! AAAGGTATGGAAAAGGTGAT+TGG + chr7_4:44619579-44619598 Msa1156320:CDS 35.0%
GTGATTGGAGAAACATTTCA+AGG + chr7_4:44619594-44619613 Msa1156320:CDS 35.0%
!! TTTTACTTGTTGGAGCTTCA+TGG - chr7_4:44619658-44619677 None:intergenic 35.0%
AAAATTGAATTTGAAGGCGG+TGG + chr7_4:44619676-44619695 Msa1156320:CDS 35.0%
GTGTTGTCCTTATGCTTAAA+AGG + chr7_4:44619710-44619729 Msa1156320:three_prime_UTR 35.0%
TTGTCCTTATGCTTAAAAGG+TGG + chr7_4:44619713-44619732 Msa1156320:three_prime_UTR 35.0%
AACTCAAAATCTCCAGTCTT+AGG + chr7_4:44619877-44619896 Msa1156320:three_prime_UTR 35.0%
TTCCTTCTCACTGATAGATA+GGG - chr7_4:44620094-44620113 None:intergenic 35.0%
TTTCCTTCTCACTGATAGAT+AGG - chr7_4:44620095-44620114 None:intergenic 35.0%
TCTATCAGTGAGAAGGAAAT+AGG + chr7_4:44620096-44620115 Msa1156320:three_prime_UTR 35.0%
CTATCAGTGAGAAGGAAATA+GGG + chr7_4:44620097-44620116 Msa1156320:three_prime_UTR 35.0%
TAGTATCATAGAGTGTGACA+AGG + chr7_4:44620142-44620161 Msa1156320:three_prime_UTR 35.0%
! AAGGGAAACTTGACAGTTTT+AGG - chr7_4:44620385-44620404 None:intergenic 35.0%
GTAAGTGGAAGAAGTTAGAA+GGG - chr7_4:44620403-44620422 None:intergenic 35.0%
TGTAAGTGGAAGAAGTTAGA+AGG - chr7_4:44620404-44620423 None:intergenic 35.0%
ACTTCTTCCACTTACATTCT+TGG + chr7_4:44620408-44620427 Msa1156320:three_prime_UTR 35.0%
GATTCAACCAAGAATGTAAG+TGG - chr7_4:44620418-44620437 None:intergenic 35.0%
! TCCAACACATTTTGCCTAAA+AGG - chr7_4:44620536-44620555 None:intergenic 35.0%
! TTTTAGGCAAAATGTGTTGG+AGG + chr7_4:44620535-44620554 Msa1156320:three_prime_UTR 35.0%
! ATGAAGAACATTGTTGTTGC+GGG + chr7_4:44620667-44620686 Msa1156320:three_prime_UTR 35.0%
! ATTTGACATGGACTATACTC+TGG + chr7_4:44620690-44620709 Msa1156320:three_prime_UTR 35.0%
! TACTATTTGGGGTATCTTAG+CGG + chr7_4:44620751-44620770 Msa1156320:three_prime_UTR 35.0%
!! TGCAGTAATTATGATGGGTT+TGG + chr7_4:44620821-44620840 Msa1156320:three_prime_UTR 35.0%
!! GGCTTGGTTTTTGACAAAAA+AGG + chr7_4:44620975-44620994 Msa1156320:three_prime_UTR 35.0%
TATGTGAAAGTAGCCTATCA+TGG + chr7_4:44621142-44621161 Msa1156320:three_prime_UTR 35.0%
CAACTCTCTAAATCCATGAT+AGG - chr7_4:44621158-44621177 None:intergenic 35.0%
AGAGTTGTCCAAAGAAGATA+AGG + chr7_4:44621171-44621190 Msa1156320:three_prime_UTR 35.0%
AGGTCAATCCTTATCTTCTT+TGG - chr7_4:44621182-44621201 None:intergenic 35.0%
ATATCCTCAAGTATTTCCAC+AGG - chr7_4:44621202-44621221 None:intergenic 35.0%
CTTTATGTGAGCAATTTGGT+TGG + chr7_4:44621490-44621509 Msa1156320:three_prime_UTR 35.0%
! GAGATGAAAGTGCAATATGA+TGG + chr7_4:44621586-44621605 Msa1156320:three_prime_UTR 35.0%
!!! TGTCTTTTTTCTTCAGGGTT+AGG + chr7_4:44621788-44621807 Msa1156320:three_prime_UTR 35.0%
GGTGCATAATTTCTTTGTGG+TGG + chr7_4:44618116-44618135 Msa1156320:intron 40.0%
! TAATTTCTTTGTGGTGGGGT+TGG + chr7_4:44618122-44618141 Msa1156320:intron 40.0%
TCTCTCGCCGTATATTTAAG+CGG + chr7_4:44618218-44618237 Msa1156320:CDS 40.0%
AATGCAGAGAACAAAAGGAG+TGG - chr7_4:44618264-44618283 None:intergenic 40.0%
AGCGAAATGCAGAGAACAAA+AGG - chr7_4:44618269-44618288 None:intergenic 40.0%
!!! ACGTAAGCGTGGTTTGTTTT+TGG + chr7_4:44618378-44618397 Msa1156320:intron 40.0%
ATTTCTCCATTCTGATCACC+AGG - chr7_4:44618453-44618472 None:intergenic 40.0%
GCCTCAACCATATCAATTCT+TGG + chr7_4:44618603-44618622 Msa1156320:intron 40.0%
!!! ACTACTTGATTTTGGGGTGT+GGG + chr7_4:44618834-44618853 Msa1156320:intron 40.0%
CACATTACAACACTCTTTCC+AGG - chr7_4:44619032-44619051 None:intergenic 40.0%
! GCCGGTTTAATTCTAACTTC+TGG + chr7_4:44619096-44619115 Msa1156320:CDS 40.0%
AGAGGAATTACTGCAAAGAG+AGG + chr7_4:44619183-44619202 Msa1156320:CDS 40.0%
! CATGTTTGGAATCTAGGAGT+AGG + chr7_4:44619342-44619361 Msa1156320:intron 40.0%
! GGTATTTCCTAATGGTGTTG+TGG + chr7_4:44619404-44619423 Msa1156320:intron 40.0%
CTATTGGGTCTGAAAAGGTA+TGG + chr7_4:44619566-44619585 Msa1156320:CDS 40.0%
! GGTCTGAAAAGGTATGGAAA+AGG + chr7_4:44619572-44619591 Msa1156320:CDS 40.0%
GCATAAGGACAACACTTACA+TGG - chr7_4:44619705-44619724 None:intergenic 40.0%
TCAAAATCTCCAGTCTTAGG+AGG + chr7_4:44619880-44619899 Msa1156320:three_prime_UTR 40.0%
CAAAATCTCCAGTCTTAGGA+GGG + chr7_4:44619881-44619900 Msa1156320:three_prime_UTR 40.0%
! TATTTTGTCCCTCCTAAGAC+TGG - chr7_4:44619892-44619911 None:intergenic 40.0%
!!! CTTAGTTTTAGGTAACGGCT+TGG + chr7_4:44620244-44620263 Msa1156320:three_prime_UTR 40.0%
! CTTTGGGAATTTATAGGCTC+AGG + chr7_4:44620502-44620521 Msa1156320:three_prime_UTR 40.0%
! CTCAGGCTTATAAGCCTTTT+AGG + chr7_4:44620519-44620538 Msa1156320:three_prime_UTR 40.0%
! GCCTTTTAGGCAAAATGTGT+TGG + chr7_4:44620532-44620551 Msa1156320:three_prime_UTR 40.0%
! ACTATTTGGGGTATCTTAGC+GGG + chr7_4:44620752-44620771 Msa1156320:three_prime_UTR 40.0%
! GTGACCAGATATGCATGTTT+TGG + chr7_4:44620848-44620867 Msa1156320:three_prime_UTR 40.0%
CTGTTTGTCTGTTGAATTGC+TGG + chr7_4:44621090-44621109 Msa1156320:three_prime_UTR 40.0%
GCTGGCTGTATGTATTTCAA+TGG + chr7_4:44621108-44621127 Msa1156320:three_prime_UTR 40.0%
! AGGCTACTTTCACATACTTG+TGG - chr7_4:44621138-44621157 None:intergenic 40.0%
AGAAGATAAGGATTGACCTG+TGG + chr7_4:44621183-44621202 Msa1156320:three_prime_UTR 40.0%
TTGACCTGTGGAAATACTTG+AGG + chr7_4:44621195-44621214 Msa1156320:three_prime_UTR 40.0%
!! CGCTCAACTGGTTGATTTTA+AGG + chr7_4:44621258-44621277 Msa1156320:three_prime_UTR 40.0%
! AAGTGCAATATGATGGGATG+TGG + chr7_4:44621593-44621612 Msa1156320:three_prime_UTR 40.0%
! AGTGCAATATGATGGGATGT+GGG + chr7_4:44621594-44621613 Msa1156320:three_prime_UTR 40.0%
ATGTGGGATATGATGAAAGC+AGG + chr7_4:44621610-44621629 Msa1156320:three_prime_UTR 40.0%
ATACAGTCATATCACGGAGA+TGG - chr7_4:44621699-44621718 None:intergenic 40.0%
ATCTCAGATTGCTCCATCTT+CGG + chr7_4:44621834-44621853 Msa1156320:three_prime_UTR 40.0%
! TTTTCGGCGGCACTTCAATT+TGG + chr7_4:44618094-44618113 Msa1156320:CDS 45.0%
TTTCGGCGGCACTTCAATTT+GGG + chr7_4:44618095-44618114 Msa1156320:CDS 45.0%
ATACTCCTCTTACGTAAGCG+TGG + chr7_4:44618367-44618386 Msa1156320:intron 45.0%
ACAAACCACGCTTACGTAAG+AGG - chr7_4:44618375-44618394 None:intergenic 45.0%
AGTGAACCTGGTGATCAGAA+TGG + chr7_4:44618444-44618463 Msa1156320:CDS 45.0%
!!! CACTACTTGATTTTGGGGTG+TGG + chr7_4:44618833-44618852 Msa1156320:intron 45.0%
TGGGGTGTGGGTATATTAGT+AGG + chr7_4:44618846-44618865 Msa1156320:intron 45.0%
GGGGTGTGGGTATATTAGTA+GGG + chr7_4:44618847-44618866 Msa1156320:intron 45.0%
TTCTGGTAGATCTCCTGATC+AGG + chr7_4:44619209-44619228 Msa1156320:CDS 45.0%
GTAGATCTCCTGATCAGGAA+AGG + chr7_4:44619214-44619233 Msa1156320:CDS 45.0%
GGAGTAGGTGAAGTGAAATC+AGG + chr7_4:44619357-44619376 Msa1156320:intron 45.0%
TCATGGCTAGACACTTGTGT+TGG - chr7_4:44619641-44619660 None:intergenic 45.0%
! GGAGCCACCTTTTAAGCATA+AGG - chr7_4:44619720-44619739 None:intergenic 45.0%
CTTCTCACTGATAGATAGGG+TGG - chr7_4:44620091-44620110 None:intergenic 45.0%
CACCCTATCTATCAGTGAGA+AGG + chr7_4:44620089-44620108 Msa1156320:three_prime_UTR 45.0%
CAAAATGTGTTGGAGGCTCA+TGG + chr7_4:44620542-44620561 Msa1156320:three_prime_UTR 45.0%
ATTGGCACGAGCTCATGATT+AGG + chr7_4:44620582-44620601 Msa1156320:three_prime_UTR 45.0%
TGTTGTTGCGGGATTTGACA+TGG + chr7_4:44620678-44620697 Msa1156320:three_prime_UTR 45.0%
TTGTGCCTTCAGGCTTGTAT+TGG - chr7_4:44620717-44620736 None:intergenic 45.0%
! CTATTTGGGGTATCTTAGCG+GGG + chr7_4:44620753-44620772 Msa1156320:three_prime_UTR 45.0%
!! GAAAGCGTTGCAAGACAGAT+AGG - chr7_4:44620784-44620803 None:intergenic 45.0%
AACAGAATGCAAGAGGGAGT+TGG - chr7_4:44620884-44620903 None:intergenic 45.0%
CGAATCAGTAGGGCATATTC+TGG - chr7_4:44621240-44621259 None:intergenic 45.0%
ACCAGTTGAGCGAATCAGTA+GGG - chr7_4:44621250-44621269 None:intergenic 45.0%
AACCAGTTGAGCGAATCAGT+AGG - chr7_4:44621251-44621270 None:intergenic 45.0%
CAAAGGGATGCTTAGCAGTT+AGG - chr7_4:44621373-44621392 None:intergenic 45.0%
AGCTGACACATTACCGAAGA+TGG - chr7_4:44621850-44621869 None:intergenic 45.0%
ACTGCAAAGAGAGGCTCTTC+TGG + chr7_4:44619192-44619211 Msa1156320:CDS 50.0%
CCTCTCTTCCTTTCCTGATC+AGG - chr7_4:44619225-44619244 None:intergenic 50.0%
CCTGATCAGGAAAGGAAGAG+AGG + chr7_4:44619222-44619241 Msa1156320:CDS 50.0%
! AAAGGAAGAGAGGTGTGCCA+TGG + chr7_4:44619232-44619251 Msa1156320:CDS 50.0%
CTGGTCCAATACAAGCCTGA+AGG + chr7_4:44620709-44620728 Msa1156320:three_prime_UTR 50.0%
GGAATTACATGGTCAGGGCT+TGG + chr7_4:44620959-44620978 Msa1156320:three_prime_UTR 50.0%
CAGTCATATCACGGAGATGG+AGG - chr7_4:44621696-44621715 None:intergenic 50.0%
!! GCCCTACTGATTCGCTCAAC+TGG + chr7_4:44621246-44621265 Msa1156320:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 44618073 44621897 44618073 ID=Msa1156320;Name=Msa1156320
chr7_4 mRNA 44618073 44621897 44618073 ID=Msa1156320-mRNA-1;Parent=Msa1156320;Name=Msa1156320-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.2|0.33|1|1|1|6|2188|201
chr7_4 exon 44618073 44618116 44618073 ID=Msa1156320-mRNA-1:exon:11482;Parent=Msa1156320-mRNA-1
chr7_4 exon 44618193 44618301 44618193 ID=Msa1156320-mRNA-1:exon:11483;Parent=Msa1156320-mRNA-1
chr7_4 exon 44618408 44618476 44618408 ID=Msa1156320-mRNA-1:exon:11484;Parent=Msa1156320-mRNA-1
chr7_4 exon 44618904 44618958 44618904 ID=Msa1156320-mRNA-1:exon:11485;Parent=Msa1156320-mRNA-1
chr7_4 exon 44619094 44619271 44619094 ID=Msa1156320-mRNA-1:exon:11486;Parent=Msa1156320-mRNA-1
chr7_4 exon 44619559 44621897 44619559 ID=Msa1156320-mRNA-1:exon:11487;Parent=Msa1156320-mRNA-1
chr7_4 CDS 44618073 44618116 44618073 ID=Msa1156320-mRNA-1:cds;Parent=Msa1156320-mRNA-1
chr7_4 CDS 44618193 44618301 44618193 ID=Msa1156320-mRNA-1:cds;Parent=Msa1156320-mRNA-1
chr7_4 CDS 44618408 44618476 44618408 ID=Msa1156320-mRNA-1:cds;Parent=Msa1156320-mRNA-1
chr7_4 CDS 44618904 44618958 44618904 ID=Msa1156320-mRNA-1:cds;Parent=Msa1156320-mRNA-1
chr7_4 CDS 44619094 44619271 44619094 ID=Msa1156320-mRNA-1:cds;Parent=Msa1156320-mRNA-1
chr7_4 CDS 44619559 44619709 44619559 ID=Msa1156320-mRNA-1:cds;Parent=Msa1156320-mRNA-1
chr7_4 three_prime_UTR 44619710 44621897 44619710 ID=Msa1156320-mRNA-1:three_prime_utr;Parent=Msa1156320-mRNA-1
Gene Sequence

>Msa1156320

ATGGGGCCGGTACTTGAAAAATTTTCGGCGGCACTTCAATTTGGTTTTGTTTTGTTGTTGGTGGGCATGTCTCTCGCCGTATATTTAAGCGGTGTTTGTGTATCGTTTGAATCCACTCCTTTTGTTCTCTGCATTTCGCTGATAAATTGTGCTCCATCGTTGAATTCACATCTATTCTATTGTTGTTGTAGTGAACCTGGTGATCAGAATGGAGAAATTACAGTGTTTGATAAAATGCCTATGAATAAAATTTGGTGTTTAGCATCACATGTTTTTGAAGCCGGTTTAATTCTAACTTCTGGTTATAGTACTACTGCTTTACCCTTTACCTTAAATTTGGTGAATTCTTCTGTTTATGATGGTTTTAGAGGAATTACTGCAAAGAGAGGCTCTTCTGGTAGATCTCCTGATCAGGAAAGGAAGAGAGGTGTGCCATGGACTGAAGAAAAACATAAGTTATTTCTATTGGGTCTGAAAAGGTATGGAAAAGGTGATTGGAGAAACATTTCAAGGAATTTTGTGATCATTAGGACGCCAACACAAGTGTCTAGCCATGAAGCTCCAACAAGTAAAAAATTGAATTTGAAGGCGGTGGCAACCATGTAA
Protein sequence

>Msa1156320

MGPVLEKFSAALQFGFVLLLVGMSLAVYLSGVCVSFESTPFVLCISLINCAPSLNSHLFYCCCSEPGDQNGEITVFDKMPMNKIWCLASHVFEAGLILTSGYSTTALPFTLNLVNSSVYDGFRGITAKRGSSGRSPDQERKRGVPWTEEKHKLFLLGLKRYGKGDWRNISRNFVIIRTPTQVSSHEAPTSKKLNLKAVATM*