AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1157610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1157610 MtrunA17_Chr7g0251901 100.000 378 0 0 1 378 1 378 0.0 781
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1157610 AT1G12840.1 81.167 377 68 2 1 377 1 374 0.0 645

Find 137 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCTTCAAATCCTTTC+TGG 0.110993 7_4:-46639896 None:intergenic
TTTCGGCCCTCATGTGTTTC+TGG 0.156192 7_4:-46638214 None:intergenic
ACGGATCTAAATTAAGAAAT+AGG 0.160675 7_4:-46639840 None:intergenic
TGTTATTATTTATATATAAT+TGG 0.189663 7_4:+46639944 Msa1157610:three_prime_UTR
TAAGTTCATGTTTGCGATAT+TGG 0.195681 7_4:+46640051 Msa1157610:three_prime_UTR
CCTTTCTGGCTTTGGCATTA+TGG 0.213585 7_4:-46639882 None:intergenic
AGAACTAGTGCACGTGAAAA+AGG 0.216056 7_4:+46637995 Msa1157610:CDS
GAAGAACTGGAGCGAGTTTC+CGG 0.223607 7_4:+46635122 Msa1157610:CDS
CTTCAAATCCTTTCTGGCTT+TGG 0.235277 7_4:-46639890 None:intergenic
TAAATTTGTTGGTTAAAGTT+AGG 0.251360 7_4:+46642069 Msa1157610:three_prime_UTR
ACAACTCTTCTTCTTCGATT+TGG 0.276305 7_4:+46634716 Msa1157610:CDS
TGGATTGCCTCCGTCTTTCT+TGG 0.280563 7_4:+46638667 Msa1157610:CDS
CGCACCTTCCAGTTTGCTTT+CGG 0.316806 7_4:-46637471 None:intergenic
TACAACTTCTTAGAAGATCT+TGG 0.321978 7_4:-46637911 None:intergenic
ATGCTATTCAATAAATTTGT+TGG 0.323133 7_4:+46642058 Msa1157610:three_prime_UTR
TCTGAAAGCATTCTGAGATA+TGG 0.325184 7_4:+46638647 Msa1157610:CDS
TATGCAGTCTAATGCTTTCA+TGG 0.327769 7_4:+46635067 Msa1157610:intron
CGGATCTAAATTAAGAAATA+GGG 0.332094 7_4:-46639839 None:intergenic
TATTGGATCTAGATTTGTTT+GGG 0.333247 7_4:+46635273 Msa1157610:intron
CATGGGCAGAGTCCGTTTCC+AGG 0.340781 7_4:+46640001 Msa1157610:three_prime_UTR
GTATTGGATCTAGATTTGTT+TGG 0.346442 7_4:+46635272 Msa1157610:intron
TTCTTAATTTAGATCCGTTA+AGG 0.350026 7_4:+46639845 Msa1157610:three_prime_UTR
CCTTTGAAGGAGATTGTTGA+TGG 0.366580 7_4:+46635322 Msa1157610:CDS
GCATAATACCTCTCCATAAC+TGG 0.367897 7_4:-46638305 None:intergenic
CCAATCCTTCTGTGAATACT+TGG 0.375349 7_4:-46637653 None:intergenic
GCTGGAATGGCTGGCCTAGC+TGG 0.382171 7_4:+46639750 Msa1157610:CDS
ATAAAATGGCAAACAGGTAC+TGG 0.382270 7_4:+46634668 Msa1157610:exon
TAAATTTGTGCAGTGCATAC+TGG 0.385862 7_4:+46639706 Msa1157610:intron
ATTTATCCAACTCCTGCTTT+CGG 0.386099 7_4:-46638231 None:intergenic
ATACAAGTGGACAGTGATCC+TGG 0.386745 7_4:-46640019 None:intergenic
TTGATTATGTCGATAATAGA+AGG 0.392622 7_4:-46642006 None:intergenic
AAATTTGTTGGTTAAAGTTA+GGG 0.395326 7_4:+46642070 Msa1157610:three_prime_UTR
AGCTATCACTCAACCCTTCA+AGG 0.403415 7_4:-46638841 None:intergenic
AAGAAGAAGAGTTGTTGTTC+TGG 0.404878 7_4:-46634708 None:intergenic
TCTTAATTTAGATCCGTTAA+GGG 0.404924 7_4:+46639846 Msa1157610:three_prime_UTR
CAATCTTCTCTGAGCGCAAC+TGG 0.405315 7_4:+46639809 Msa1157610:exon
GCTATTAACCGAAAGCAAAC+TGG 0.406414 7_4:+46637463 Msa1157610:CDS
TTGATAGTGAAAGAAACATA+TGG 0.407475 7_4:-46639789 None:intergenic
GATTGAACGTACTTTCTTCT+CGG 0.407525 7_4:-46638819 None:intergenic
ACGGGGTCTAATGAATTTCA+TGG 0.413852 7_4:+46639983 Msa1157610:three_prime_UTR
GGAGCAGTCGAGGTTTCAAC+GGG 0.418534 7_4:+46639965 Msa1157610:three_prime_UTR
CAGGCGTCAGATTGAAGAAC+TGG 0.420504 7_4:+46635109 Msa1157610:CDS
TCCCACTATGTCGCCTTTGA+AGG 0.421157 7_4:+46635309 Msa1157610:CDS
AGTTCGTGATCTTTCTAACT+TGG 0.424259 7_4:+46637573 Msa1157610:CDS
AGATCCGTTAAGGGTTCTCT+TGG 0.426265 7_4:+46639855 Msa1157610:three_prime_UTR
CAATGGTGCTATGCCAGTTA+TGG 0.439580 7_4:+46638292 Msa1157610:CDS
AGAGTTCCAACACGGAGATT+AGG 0.444470 7_4:-46634912 None:intergenic
CTGTCCAAGAGAACCCTTAA+CGG 0.446617 7_4:-46639859 None:intergenic
ACTGCTGGTCTCACCGTTGA+TGG 0.446979 7_4:+46635152 Msa1157610:CDS
GAAGAGTTGTTGTTCTGGAC+GGG 0.448429 7_4:-46634703 None:intergenic
GAGGTAGGTGCTGGAATGGC+TGG 0.451694 7_4:+46639741 Msa1157610:CDS
CCGTTGATTCATACTTGACT+AGG 0.454820 7_4:+46635180 Msa1157610:CDS
CCAAGTATTCACAGAAGGAT+TGG 0.455442 7_4:+46637653 Msa1157610:CDS
AAAATGTGTTTATACGAAGT+TGG 0.460441 7_4:+46634586 None:intergenic
ACAACTTCTTAGAAGATCTT+GGG 0.467331 7_4:-46637910 None:intergenic
AACACATGAGGGCCGAAAGC+AGG 0.471760 7_4:+46638219 Msa1157610:CDS
ATGTGTGGGAGGGATACTTA+TGG 0.480052 7_4:+46641899 Msa1157610:three_prime_UTR
GGATAAATTGATGCAAGATC+AGG 0.480813 7_4:+46638246 Msa1157610:CDS
CTAGTCAAGTATGAATCAAC+GGG 0.488289 7_4:-46635179 None:intergenic
TCTGAAGTTATAATGTCCTC+TGG 0.490964 7_4:-46637601 None:intergenic
AAATTATCTTTACACAAAAG+AGG 0.492956 7_4:-46642104 None:intergenic
GTAGTATTGTCCTTACGAAT+GGG 0.493037 7_4:+46642135 Msa1157610:three_prime_UTR
CGAATGGGATTGTGTTTAAG+TGG 0.495947 7_4:+46642150 Msa1157610:three_prime_UTR
GTTTCCGGTGTTAACACTGC+TGG 0.496991 7_4:+46635137 Msa1157610:CDS
GGATTGTGTTTAAGTGGTTG+TGG 0.500135 7_4:+46642156 Msa1157610:three_prime_UTR
TAATCAATTCTGTAACAGAT+AGG 0.508940 7_4:+46642022 Msa1157610:three_prime_UTR
TCCAGCACCTACCTCTTCAT+CGG 0.509390 7_4:-46639733 None:intergenic
TGAGGGGTTCTCTGCTGCAA+TGG 0.511174 7_4:+46638275 Msa1157610:CDS
TCAACTTTATACTGTTGTGT+GGG 0.512743 7_4:+46641965 Msa1157610:three_prime_UTR
CCATAATGCCAAAGCCAGAA+AGG 0.513490 7_4:+46639882 Msa1157610:three_prime_UTR
TGCAAGATCAGGAAAGTTTG+AGG 0.516872 7_4:+46638257 Msa1157610:CDS
TGTAGTATTGTCCTTACGAA+TGG 0.517156 7_4:+46642134 Msa1157610:three_prime_UTR
ATGTTTGCGATATTGGTACT+CGG 0.517199 7_4:+46640058 Msa1157610:three_prime_UTR
ACCGATGAAGAGGTAGGTGC+TGG 0.517495 7_4:+46639732 Msa1157610:CDS
GCAAGATCAGGAAAGTTTGA+GGG 0.521056 7_4:+46638258 Msa1157610:CDS
AAAGTACGTTCAATCCTTGA+AGG 0.521138 7_4:+46638827 Msa1157610:CDS
AAGGTGTTTCGAGCAAGATC+AGG 0.521520 7_4:+46635090 Msa1157610:CDS
AACATTCCTAATCTCCGTGT+TGG 0.528436 7_4:+46634906 Msa1157610:CDS
ACACAACAGTATAAAGTTGA+CGG 0.528767 7_4:-46641962 None:intergenic
ACTTGGATACAATCGCAAGC+AGG 0.530434 7_4:-46637636 None:intergenic
ATCTTCTAAGAAGTTGTATG+AGG 0.532393 7_4:+46637916 Msa1157610:CDS
GGTTGAGTGATAGCTCAAAC+AGG 0.532821 7_4:+46638849 Msa1157610:CDS
CAGTCTAATGCTTTCATGGA+AGG 0.536029 7_4:+46635071 Msa1157610:intron
TGGAGCAGTCGAGGTTTCAA+CGG 0.536589 7_4:+46639964 Msa1157610:three_prime_UTR
CCTAGTCAAGTATGAATCAA+CGG 0.542235 7_4:-46635180 None:intergenic
CTCCTTCAAAGGCGACATAG+TGG 0.542755 7_4:-46635311 None:intergenic
TGTTTGCGATATTGGTACTC+GGG 0.544541 7_4:+46640059 Msa1157610:three_prime_UTR
TGAGGGCCGAAAGCAGGAGT+TGG 0.545604 7_4:+46638225 Msa1157610:CDS
TGATAGTGAAAGAAACATAT+GGG 0.549997 7_4:-46639788 None:intergenic
CACAGCACAAAAGTGCATCC+AGG 0.552135 7_4:-46638615 None:intergenic
GTCAACTTTATACTGTTGTG+TGG 0.554232 7_4:+46641964 Msa1157610:three_prime_UTR
TAGTCAAGTCGCTAAGATTG+AGG 0.554636 7_4:+46635351 Msa1157610:CDS
GAAAATAATACAGTCATGTG+TGG 0.557673 7_4:+46641884 Msa1157610:three_prime_UTR
AAGTACGTTCAATCCTTGAA+GGG 0.558521 7_4:+46638828 Msa1157610:CDS
AGAAGAGTTGTTGTTCTGGA+CGG 0.558607 7_4:-46634704 None:intergenic
TAAAATGGCAAACAGGTACT+GGG 0.564084 7_4:+46634669 Msa1157610:exon
AAAATAATACAGTCATGTGT+GGG 0.568102 7_4:+46641885 Msa1157610:three_prime_UTR
CCATCAACAATCTCCTTCAA+AGG 0.568657 7_4:-46635322 None:intergenic
GTGGACAGTGATCCTGGAAA+CGG 0.570690 7_4:-46640013 None:intergenic
GAGTATCTGCTTCACCAGCT+AGG 0.579187 7_4:-46639764 None:intergenic
TAAGATTGAGGATGATCTCA+AGG 0.580294 7_4:+46635363 Msa1157610:CDS
CTTACATGAAACAATACAAG+TGG 0.580524 7_4:-46640032 None:intergenic
AAGAGTTGTTGTTCTGGACG+GGG 0.581423 7_4:-46634702 None:intergenic
CGGGGTCTAATGAATTTCAT+GGG 0.582579 7_4:+46639984 Msa1157610:three_prime_UTR
TCCTTCAAAGGCGACATAGT+GGG 0.588007 7_4:-46635310 None:intergenic
ACTTCGAATATTATTATACT+CGG 0.589484 7_4:-46637431 None:intergenic
TAAACACAATCCCATTCGTA+AGG 0.590690 7_4:-46642145 None:intergenic
CTTGGTGAGATCATCGCTGA+GGG 0.591407 7_4:-46634949 None:intergenic
TGTATCCAAGTATTCACAGA+AGG 0.592514 7_4:+46637648 Msa1157610:CDS
AATTTGTTGGTTAAAGTTAG+GGG 0.592727 7_4:+46642071 Msa1157610:three_prime_UTR
ATATATAATTGGAGCAGTCG+AGG 0.593000 7_4:+46639955 Msa1157610:three_prime_UTR
ATAATACAGTCATGTGTGGG+AGG 0.593258 7_4:+46641888 Msa1157610:three_prime_UTR
CTTGGATACAATCGCAAGCA+GGG 0.598061 7_4:-46637635 None:intergenic
TGAAGAGGTAGGTGCTGGAA+TGG 0.604134 7_4:+46639737 Msa1157610:CDS
GAGTAGAGTACCAAGAAAGA+CGG 0.606161 7_4:-46638677 None:intergenic
TTCTAACTTGGTAAAACCAG+AGG 0.607817 7_4:+46637585 Msa1157610:CDS
TAATACAGTCATGTGTGGGA+GGG 0.615638 7_4:+46641889 Msa1157610:three_prime_UTR
AGTTAGATTACTCTGTAGAG+AGG 0.619155 7_4:-46634781 None:intergenic
CAACTTTATACTGTTGTGTG+GGG 0.620678 7_4:+46641966 Msa1157610:three_prime_UTR
CAAGATCAGGAAAGTTTGAG+GGG 0.631451 7_4:+46638259 Msa1157610:CDS
TCTGTAGAGAGGAGTATCGA+AGG 0.643816 7_4:-46634770 None:intergenic
ATCAACGGGAACTCCATCAA+CGG 0.645896 7_4:-46635165 None:intergenic
TGGAAAACCGATGAAGAGGT+AGG 0.652841 7_4:+46639726 Msa1157610:CDS
ATACTGGAAAACCGATGAAG+AGG 0.655781 7_4:+46639722 Msa1157610:CDS
TGAAACATTGACTAGCTATG+TGG 0.657544 7_4:+46637687 Msa1157610:CDS
TGTAACACTCTTCAATCGTG+TGG 0.664450 7_4:+46637961 Msa1157610:CDS
TAGAGTACCAAGAAAGACGG+AGG 0.665190 7_4:-46638674 None:intergenic
GTGCTATGCCAGTTATGGAG+AGG 0.670859 7_4:+46638297 Msa1157610:CDS
TTAACCGAAAGCAAACTGGA+AGG 0.677828 7_4:+46637467 Msa1157610:CDS
CCTTGGTGAGATCATCGCTG+AGG 0.684144 7_4:-46634950 None:intergenic
GAGAATCTAGAGTTCCAACA+CGG 0.689268 7_4:-46634920 None:intergenic
TACAGTCCAGAAACACATGA+GGG 0.696017 7_4:+46638208 Msa1157610:CDS
GAGACCAGCAGTGTTAACAC+CGG 0.714693 7_4:-46635141 None:intergenic
ATACAGTCCAGAAACACATG+AGG 0.715627 7_4:+46638207 Msa1157610:CDS
CCTCAGCGATGATCTCACCA+AGG 0.724666 7_4:+46634950 Msa1157610:CDS
AATGGCAAACAGGTACTGGG+TGG 0.739017 7_4:+46634672 Msa1157610:exon
GAGCAGTCGAGGTTTCAACG+GGG 0.821739 7_4:+46639966 Msa1157610:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAATAATAAAACATA+TGG + chr7_4:46636613-46636632 Msa1157610:intron 10.0%
!! ATTAATCTTATATTAATCAA+GGG - chr7_4:46637203-46637222 None:intergenic 10.0%
!! AATTAATCTTATATTAATCA+AGG - chr7_4:46637204-46637223 None:intergenic 10.0%
!!! CATATTTATTATTTTACTTA+TGG - chr7_4:46640159-46640178 None:intergenic 10.0%
!!! ATTTTTTAAAACAACTTTTA+TGG + chr7_4:46641283-46641302 Msa1157610:intron 10.0%
!!! CATATTTATTATTTTACTTA+TGG - chr7_4:46640159-46640178 None:intergenic 10.0%
!! AACACTAATAGTATAAATAA+GGG - chr7_4:46635501-46635520 None:intergenic 15.0%
!!! ATGTTATTTTATATCATCAA+GGG - chr7_4:46636725-46636744 None:intergenic 15.0%
!!! TATGTTATTTTATATCATCA+AGG - chr7_4:46636726-46636745 None:intergenic 15.0%
!! TTAAAATCCCTATTTAAATA+TGG + chr7_4:46636917-46636936 Msa1157610:intron 15.0%
!! TTAATCTTATATTAATCAAG+GGG - chr7_4:46637202-46637221 None:intergenic 15.0%
!!! CTAATTAGGTTAAATATTTT+AGG + chr7_4:46637886-46637905 Msa1157610:intron 15.0%
!! AATTAAAAGAAATACTTACT+TGG - chr7_4:46638024-46638043 None:intergenic 15.0%
!! TAAAAAAAAAAATGTTGTTC+GGG - chr7_4:46638736-46638755 None:intergenic 15.0%
!! GTAAAAAAAAAAATGTTGTT+CGG - chr7_4:46638737-46638756 None:intergenic 15.0%
!! AAATAAGAAGTTATAGTTAT+TGG + chr7_4:46639404-46639423 Msa1157610:intron 15.0%
!! AATCAATTATAAGATGATTA+GGG - chr7_4:46640679-46640698 None:intergenic 15.0%
!! ATTGTAATAAAAAATTGTAG+TGG + chr7_4:46640950-46640969 Msa1157610:intron 15.0%
!! TTACAATCAACAAAATAAAA+TGG + chr7_4:46641492-46641511 Msa1157610:intron 15.0%
!! AACACTCGTAAAAAATAAAA+TGG + chr7_4:46634654-46634673 Msa1157610:exon 20.0%
!! TAAAAAATAAAATGGCAAAC+AGG + chr7_4:46634662-46634681 Msa1157610:exon 20.0%
!! AAGATCGATGAATTAATTAA+AGG - chr7_4:46634860-46634879 None:intergenic 20.0%
!! CAACACTAATAGTATAAATA+AGG - chr7_4:46635502-46635521 None:intergenic 20.0%
!! ATTTATACTATTAGTGTTGT+TGG + chr7_4:46635503-46635522 Msa1157610:intron 20.0%
!!! TACAAAATTTTGTGAAATAG+TGG + chr7_4:46635596-46635615 Msa1157610:intron 20.0%
!! ATTCATATACAAAATACCAA+CGG + chr7_4:46635854-46635873 Msa1157610:intron 20.0%
!!! TTTTCTTAGATAGCATATTT+TGG + chr7_4:46635918-46635937 Msa1157610:intron 20.0%
!! CTTCAACTCAAATATAAATA+AGG - chr7_4:46636003-46636022 None:intergenic 20.0%
!!! TCTTCAACTTTAAAAAGTTT+TGG + chr7_4:46636423-46636442 Msa1157610:intron 20.0%
!!! AATAAAACATATGGATTATC+TGG + chr7_4:46636622-46636641 Msa1157610:intron 20.0%
!! TAACATACTTTATTGATCTA+AGG + chr7_4:46636739-46636758 Msa1157610:intron 20.0%
!! AACATACTTTATTGATCTAA+GGG + chr7_4:46636740-46636759 Msa1157610:intron 20.0%
!! TTAGAGTCCATATTTAAATA+GGG - chr7_4:46636927-46636946 None:intergenic 20.0%
!!! TTTAGAGTCCATATTTAAAT+AGG - chr7_4:46636928-46636947 None:intergenic 20.0%
!! TTTAAAGGTAATTATATGAC+AGG - chr7_4:46637000-46637019 None:intergenic 20.0%
!! TAATCTTATATTAATCAAGG+GGG - chr7_4:46637201-46637220 None:intergenic 20.0%
!! TGTCTTATAGTATAATAGTA+TGG + chr7_4:46637255-46637274 Msa1157610:intron 20.0%
!! ATGTTCTTTGTAATATTTCT+CGG - chr7_4:46637325-46637344 None:intergenic 20.0%
!! ACTTCGAATATTATTATACT+CGG - chr7_4:46637434-46637453 None:intergenic 20.0%
!!! TGTCTTCAATTTGTTAATAT+TGG + chr7_4:46638056-46638075 Msa1157610:intron 20.0%
!! TCGAATATCAATTCATAATT+TGG + chr7_4:46638131-46638150 Msa1157610:intron 20.0%
!! TTCAGTCTTAATATATTCTT+GGG - chr7_4:46638366-46638385 None:intergenic 20.0%
!! ATTCAGTCTTAATATATTCT+TGG - chr7_4:46638367-46638386 None:intergenic 20.0%
!!! TTTTACTTTATACTTTCTGA+AGG + chr7_4:46638583-46638602 Msa1157610:intron 20.0%
!! AAAAAAAAAAATGTTGTTCG+GGG - chr7_4:46638735-46638754 None:intergenic 20.0%
!!! TTTTAAAGAATTTCATGAAG+AGG - chr7_4:46639133-46639152 None:intergenic 20.0%
!! TCTTCATGAAATTCTTTAAA+AGG + chr7_4:46639132-46639151 Msa1157610:intron 20.0%
!! TTCTTTAATGTAGATGTAAA+AGG - chr7_4:46639259-46639278 None:intergenic 20.0%
!! ATGCTATTCAATAAATTTGT+TGG + chr7_4:46640286-46640305 Msa1157610:intron 20.0%
!!! TAAATTTGTTGGTTAAAGTT+AGG + chr7_4:46640297-46640316 Msa1157610:intron 20.0%
!!! AAATTTGTTGGTTAAAGTTA+GGG + chr7_4:46640298-46640317 Msa1157610:intron 20.0%
!! GAATCAATTATAAGATGATT+AGG - chr7_4:46640680-46640699 None:intergenic 20.0%
!! AATAAAAGTCTAGACAAAAT+TGG - chr7_4:46641085-46641104 None:intergenic 20.0%
!! CATTATGTAATACTAATCAT+AGG + chr7_4:46641133-46641152 Msa1157610:intron 20.0%
!! GGTTAATTTAATAACAATAG+AGG - chr7_4:46641404-46641423 None:intergenic 20.0%
!! TAATGATACTATATAAGAGT+CGG - chr7_4:46641475-46641494 None:intergenic 20.0%
!! ATGCTATTCAATAAATTTGT+TGG + chr7_4:46640286-46640305 Msa1157610:intron 20.0%
!!! TAAATTTGTTGGTTAAAGTT+AGG + chr7_4:46640297-46640316 Msa1157610:intron 20.0%
!!! AAATTTGTTGGTTAAAGTTA+GGG + chr7_4:46640298-46640317 Msa1157610:intron 20.0%
!! AAATTATCTTTACACAAAAG+AGG - chr7_4:46642107-46642126 None:intergenic 20.0%
! GTTAAATAGATGATTAGTGA+GGG - chr7_4:46634807-46634826 None:intergenic 25.0%
! AGTTAAATAGATGATTAGTG+AGG - chr7_4:46634808-46634827 None:intergenic 25.0%
!! TATTGGATCTAGATTTGTTT+GGG + chr7_4:46635273-46635292 Msa1157610:intron 25.0%
!! GATCTATATGTTTGATTTCA+TGG + chr7_4:46635425-46635444 Msa1157610:intron 25.0%
! TTCATATACAAAATACCAAC+GGG + chr7_4:46635855-46635874 Msa1157610:intron 25.0%
! TAAATTTATGATATGGTCTG+CGG + chr7_4:46635882-46635901 Msa1157610:intron 25.0%
! TAGAAAACCTTTAAACAAAC+AGG - chr7_4:46635945-46635964 None:intergenic 25.0%
! AACATATACCACATATATAG+GGG - chr7_4:46636028-46636047 None:intergenic 25.0%
! CAACATATACCACATATATA+GGG - chr7_4:46636029-46636048 None:intergenic 25.0%
! AACCAAAAACAAATATTAGC+TGG - chr7_4:46636116-46636135 None:intergenic 25.0%
! AGAGAATAATGTAGAAGATA+TGG + chr7_4:46636176-46636195 Msa1157610:intron 25.0%
!! TATGGATTATCTGGATTTAA+AGG + chr7_4:46636631-46636650 Msa1157610:intron 25.0%
! ACATACTTTATTGATCTAAG+GGG + chr7_4:46636741-46636760 Msa1157610:intron 25.0%
! AATAAACCCAAAGTTTATTC+CGG - chr7_4:46636888-46636907 None:intergenic 25.0%
!! GAATAAACTTTGGGTTTATT+GGG + chr7_4:46636888-46636907 Msa1157610:intron 25.0%
!!! GGCACATCAATTTTTTTTAA+AGG - chr7_4:46637015-46637034 None:intergenic 25.0%
! TCTACAATTATTTGCTTCAT+CGG - chr7_4:46637091-46637110 None:intergenic 25.0%
! GAATGTTTAGATGAATTACA+GGG - chr7_4:46637790-46637809 None:intergenic 25.0%
! AAGGTATGAACAAACAATAT+TGG - chr7_4:46637812-46637831 None:intergenic 25.0%
!! TATTGGTAATATCTGTATAG+TGG + chr7_4:46638073-46638092 Msa1157610:intron 25.0%
! AAAAAAAAAATGTTGTTCGG+GGG - chr7_4:46638734-46638753 None:intergenic 25.0%
!! TTTTTACCACTGATCATTAT+TGG + chr7_4:46638750-46638769 Msa1157610:intron 25.0%
!! TTTTACCACTGATCATTATT+GGG + chr7_4:46638751-46638770 Msa1157610:intron 25.0%
! GTCTCATCATTTAAATCATA+TGG + chr7_4:46638897-46638916 Msa1157610:intron 25.0%
!! AGTTGAAGTACTATCAAATT+TGG - chr7_4:46639095-46639114 None:intergenic 25.0%
!! AAGTTATAGTTATTGGTTAG+TGG + chr7_4:46639411-46639430 Msa1157610:intron 25.0%
!! TTTTGGTAAAGCATAATACA+GGG - chr7_4:46639573-46639592 None:intergenic 25.0%
! GTTGATTGACTATTATTACA+TGG + chr7_4:46639666-46639685 Msa1157610:intron 25.0%
!! TGATAGTGAAAGAAACATAT+GGG - chr7_4:46639791-46639810 None:intergenic 25.0%
!!! TTGATAGTGAAAGAAACATA+TGG - chr7_4:46639792-46639811 None:intergenic 25.0%
! CGGATCTAAATTAAGAAATA+GGG - chr7_4:46639842-46639861 None:intergenic 25.0%
! ACGGATCTAAATTAAGAAAT+AGG - chr7_4:46639843-46639862 None:intergenic 25.0%
! TTCTTAATTTAGATCCGTTA+AGG + chr7_4:46639845-46639864 Msa1157610:three_prime_UTR 25.0%
! TCTTAATTTAGATCCGTTAA+GGG + chr7_4:46639846-46639865 Msa1157610:three_prime_UTR 25.0%
! AAAATAATACAGTCATGTGT+GGG + chr7_4:46640113-46640132 Msa1157610:intron 25.0%
! TTGATTATGTCGATAATAGA+AGG - chr7_4:46640237-46640256 None:intergenic 25.0%
! TAATCAATTCTGTAACAGAT+AGG + chr7_4:46640250-46640269 Msa1157610:intron 25.0%
!!! AATTTGTTGGTTAAAGTTAG+GGG + chr7_4:46640299-46640318 Msa1157610:intron 25.0%
! TAGTTATCTTTACACAAAAG+AGG - chr7_4:46640335-46640354 None:intergenic 25.0%
!!! TCATTGGTGACTATTTTAAT+CGG - chr7_4:46640389-46640408 None:intergenic 25.0%
! TTCTAGACACTTTCAAATTT+AGG - chr7_4:46640428-46640447 None:intergenic 25.0%
! ATAATGTAACATAGTAGCTT+TGG - chr7_4:46640541-46640560 None:intergenic 25.0%
! TGTTACATTATTACACCAAA+AGG + chr7_4:46640550-46640569 Msa1157610:intron 25.0%
! CAAAAGGTTTAACATTCATA+GGG + chr7_4:46640566-46640585 Msa1157610:intron 25.0%
! TATAAGATGATTAGGGTTTA+TGG - chr7_4:46640672-46640691 None:intergenic 25.0%
! AAAAAGGAAGCAAAAATTGT+GGG + chr7_4:46640710-46640729 Msa1157610:intron 25.0%
! AATTCTTCGTATCTTAAAAG+TGG + chr7_4:46640917-46640936 Msa1157610:intron 25.0%
! ATTCTTCGTATCTTAAAAGT+GGG + chr7_4:46640918-46640937 Msa1157610:intron 25.0%
! GGTCATGTATTACTATAATA+GGG - chr7_4:46641530-46641549 None:intergenic 25.0%
! CGGATCTAAATTAAGAAATA+GGG - chr7_4:46639842-46639861 None:intergenic 25.0%
! ACGGATCTAAATTAAGAAAT+AGG - chr7_4:46639843-46639862 None:intergenic 25.0%
! TTCTTAATTTAGATCCGTTA+AGG + chr7_4:46639845-46639864 Msa1157610:three_prime_UTR 25.0%
! TCTTAATTTAGATCCGTTAA+GGG + chr7_4:46639846-46639865 Msa1157610:three_prime_UTR 25.0%
! AAAATAATACAGTCATGTGT+GGG + chr7_4:46640113-46640132 Msa1157610:intron 25.0%
! TTGATTATGTCGATAATAGA+AGG - chr7_4:46640237-46640256 None:intergenic 25.0%
! TAATCAATTCTGTAACAGAT+AGG + chr7_4:46640250-46640269 Msa1157610:intron 25.0%
!!! AATTTGTTGGTTAAAGTTAG+GGG + chr7_4:46640299-46640318 Msa1157610:intron 25.0%
! TAGAGATATTTTGCTGCAAT+TGG - chr7_4:46634744-46634763 None:intergenic 30.0%
GAAAATCGGAAAATTAACCT+TGG - chr7_4:46634970-46634989 None:intergenic 30.0%
ACAAACTATCAACAGATCAA+AGG - chr7_4:46635226-46635245 None:intergenic 30.0%
! GTATTGGATCTAGATTTGTT+TGG + chr7_4:46635272-46635291 Msa1157610:intron 30.0%
! TTTGATTTCATGGATGTGAT+GGG + chr7_4:46635435-46635454 Msa1157610:intron 30.0%
! TAATTTTCTTGCCTGTTGTA+TGG + chr7_4:46635689-46635708 Msa1157610:intron 30.0%
! TTTAAGTCTCTGCATTCTTT+TGG + chr7_4:46635720-46635739 Msa1157610:intron 30.0%
TTGCATCAGCAGATATAAAT+TGG - chr7_4:46635769-46635788 None:intergenic 30.0%
!! GATCCAAAAAGTTTAGTTCT+GGG + chr7_4:46635824-46635843 Msa1157610:intron 30.0%
TCATATACAAAATACCAACG+GGG + chr7_4:46635856-46635875 Msa1157610:intron 30.0%
! TTTTGGTCCTGTTTGTTTAA+AGG + chr7_4:46635935-46635954 Msa1157610:intron 30.0%
TAAGAAACAGACGATCAATT+GGG - chr7_4:46635972-46635991 None:intergenic 30.0%
TTAAGAAACAGACGATCAAT+TGG - chr7_4:46635973-46635992 None:intergenic 30.0%
CCAACATATACCACATATAT+AGG - chr7_4:46636030-46636049 None:intergenic 30.0%
CCTATATATGTGGTATATGT+TGG + chr7_4:46636027-46636046 Msa1157610:intron 30.0%
CAGCACAAAGTAAAATTCAT+AGG - chr7_4:46636241-46636260 None:intergenic 30.0%
!! GAATTTTACTTTGTGCTGTT+TGG + chr7_4:46636243-46636262 Msa1157610:intron 30.0%
! TTTAGTTCCTGAAGTTACAT+AGG + chr7_4:46636321-46636340 Msa1157610:intron 30.0%
GTAAATTCCTATGTAACTTC+AGG - chr7_4:46636331-46636350 None:intergenic 30.0%
!! TGAAAGGGTGCTTATAAAAA+GGG - chr7_4:46636482-46636501 None:intergenic 30.0%
!!! AAGGGGTGTTTTTAAATGAA+CGG + chr7_4:46636511-46636530 Msa1157610:intron 30.0%
ATAAAACGCTTAGAAACAGA+TGG + chr7_4:46636582-46636601 Msa1157610:intron 30.0%
TAAAACGCTTAGAAACAGAT+GGG + chr7_4:46636583-46636602 Msa1157610:intron 30.0%
CATACTTTATTGATCTAAGG+GGG + chr7_4:46636742-46636761 Msa1157610:intron 30.0%
ATACTTTATTGATCTAAGGG+GGG + chr7_4:46636743-46636762 Msa1157610:intron 30.0%
! GGAATAAACTTTGGGTTTAT+TGG + chr7_4:46636887-46636906 Msa1157610:intron 30.0%
CTAAAAATACTATTTGAGCC+CGG + chr7_4:46636943-46636962 Msa1157610:intron 30.0%
TTATTTGCAGTATAACCAAG+TGG - chr7_4:46637057-46637076 None:intergenic 30.0%
! TTATTTGCTTCATCGGATTT+TGG - chr7_4:46637084-46637103 None:intergenic 30.0%
TATTAATCAAGGGGGAAAAA+AGG - chr7_4:46637193-46637212 None:intergenic 30.0%
! GTGGATTGATATTTCTACTT+GGG + chr7_4:46637372-46637391 Msa1157610:intron 30.0%
ATATGAATACTACTTCCTTG+TGG + chr7_4:46637735-46637754 Msa1157610:intron 30.0%
TTCCTTGTGGTTATTGTAAA+TGG + chr7_4:46637748-46637767 Msa1157610:intron 30.0%
TCCTTGTGGTTATTGTAAAT+GGG + chr7_4:46637749-46637768 Msa1157610:intron 30.0%
GGAATGTTTAGATGAATTAC+AGG - chr7_4:46637791-46637810 None:intergenic 30.0%
GCAAACTTGGAATTATTCAA+AGG - chr7_4:46637831-46637850 None:intergenic 30.0%
ATGAAAAGCAAAAGCAAACT+TGG - chr7_4:46637844-46637863 None:intergenic 30.0%
TCCTTGTTCTACTTCTAATT+AGG + chr7_4:46637872-46637891 Msa1157610:intron 30.0%
ACCTAATTAGAAGTAGAACA+AGG - chr7_4:46637876-46637895 None:intergenic 30.0%
ACAACTTCTTAGAAGATCTT+GGG - chr7_4:46637913-46637932 None:intergenic 30.0%
TACAACTTCTTAGAAGATCT+TGG - chr7_4:46637914-46637933 None:intergenic 30.0%
! ATCTTCTAAGAAGTTGTATG+AGG + chr7_4:46637916-46637935 Msa1157610:CDS 30.0%
! TCAATTCATAATTTGGTGAC+TGG + chr7_4:46638138-46638157 Msa1157610:intron 30.0%
AGATAGCATTAGAAAAACCA+AGG + chr7_4:46638391-46638410 Msa1157610:intron 30.0%
CTTAAATCCATCAGTTAATC+AGG - chr7_4:46638950-46638969 None:intergenic 30.0%
!!! CTTGTTTTTGCTGGATATAA+AGG + chr7_4:46639010-46639029 Msa1157610:intron 30.0%
GTCAAAATGTGAATCATGTT+TGG - chr7_4:46639166-46639185 None:intergenic 30.0%
!! TGATTCACATTTTGACAGTT+AGG + chr7_4:46639170-46639189 Msa1157610:intron 30.0%
CTAGAGTAAGTTCTGTATAT+TGG - chr7_4:46639383-46639402 None:intergenic 30.0%
!! TGGTTAGTGGATAGTTATTT+TGG + chr7_4:46639424-46639443 Msa1157610:intron 30.0%
TTTGGTAAAGCATAATACAG+GGG - chr7_4:46639572-46639591 None:intergenic 30.0%
!! GTTTTGGTAAAGCATAATAC+AGG - chr7_4:46639574-46639593 None:intergenic 30.0%
CAAAATCTTCAAATCCTTTC+TGG - chr7_4:46639899-46639918 None:intergenic 30.0%
CTTACATGAAACAATACAAG+TGG - chr7_4:46640035-46640054 None:intergenic 30.0%
TAAGTTCATGTTTGCGATAT+TGG + chr7_4:46640051-46640070 Msa1157610:three_prime_UTR 30.0%
GAAAATAATACAGTCATGTG+TGG + chr7_4:46640112-46640131 Msa1157610:intron 30.0%
ACACAACAGTATAAAGTTGA+CGG - chr7_4:46640193-46640212 None:intergenic 30.0%
TCAACTTTATACTGTTGTGT+GGG + chr7_4:46640193-46640212 Msa1157610:intron 30.0%
CGTTACACAATATAACTCAT+TGG - chr7_4:46640405-46640424 None:intergenic 30.0%
TATTCAAATAAGCGCTAAAC+TGG + chr7_4:46640448-46640467 Msa1157610:intron 30.0%
! CCTATGAATGTTAAACCTTT+TGG - chr7_4:46640568-46640587 None:intergenic 30.0%
CCAAAAGGTTTAACATTCAT+AGG + chr7_4:46640565-46640584 Msa1157610:intron 30.0%
ACATTCATAGGGTAAGATTA+AGG + chr7_4:46640577-46640596 Msa1157610:intron 30.0%
CATTCATAGGGTAAGATTAA+GGG + chr7_4:46640578-46640597 Msa1157610:intron 30.0%
! ATGATTAGGGTTTATGGTTT+TGG - chr7_4:46640666-46640685 None:intergenic 30.0%
TGATTCCAAAGAGAAGAAAA+AGG + chr7_4:46640694-46640713 Msa1157610:intron 30.0%
GAAAAAGGAAGCAAAAATTG+TGG + chr7_4:46640709-46640728 Msa1157610:intron 30.0%
AGAGGATTGTGTGAAAAATT+TGG + chr7_4:46640812-46640831 Msa1157610:intron 30.0%
! GTTTAAGACTAGAGGTATAA+TGG - chr7_4:46640873-46640892 None:intergenic 30.0%
ATATTGTACAGAATCATCTC+TGG - chr7_4:46641425-46641444 None:intergenic 30.0%
! TACTATAATAGGGTGTCTAA+TGG - chr7_4:46641520-46641539 None:intergenic 30.0%
GGGTCATGTATTACTATAAT+AGG - chr7_4:46641531-46641550 None:intergenic 30.0%
GTGTAATATAAGTTGCTCTT+GGG - chr7_4:46641551-46641570 None:intergenic 30.0%
TGTGTAATATAAGTTGCTCT+TGG - chr7_4:46641552-46641571 None:intergenic 30.0%
CAAAATCTTCAAATCCTTTC+TGG - chr7_4:46639899-46639918 None:intergenic 30.0%
CTTACATGAAACAATACAAG+TGG - chr7_4:46640035-46640054 None:intergenic 30.0%
TAAGTTCATGTTTGCGATAT+TGG + chr7_4:46640051-46640070 Msa1157610:three_prime_UTR 30.0%
GAAAATAATACAGTCATGTG+TGG + chr7_4:46640112-46640131 Msa1157610:intron 30.0%
ACACAACAGTATAAAGTTGA+CGG - chr7_4:46640193-46640212 None:intergenic 30.0%
TCAACTTTATACTGTTGTGT+GGG + chr7_4:46640193-46640212 Msa1157610:intron 30.0%
ATAAAATGGCAAACAGGTAC+TGG + chr7_4:46634668-46634687 Msa1157610:exon 35.0%
TAAAATGGCAAACAGGTACT+GGG + chr7_4:46634669-46634688 Msa1157610:exon 35.0%
! AAGAAGAAGAGTTGTTGTTC+TGG - chr7_4:46634711-46634730 None:intergenic 35.0%
ACAACTCTTCTTCTTCGATT+TGG + chr7_4:46634716-46634735 Msa1157610:CDS 35.0%
AGTTAGATTACTCTGTAGAG+AGG - chr7_4:46634784-46634803 None:intergenic 35.0%
ATTAGAGTAATGAAGCGTGA+TGG - chr7_4:46634833-46634852 None:intergenic 35.0%
GAGAGATGAAAGAGGAAAAT+CGG - chr7_4:46634984-46635003 None:intergenic 35.0%
GTGAAATTGAGAGATGAAAG+AGG - chr7_4:46634992-46635011 None:intergenic 35.0%
TATGCAGTCTAATGCTTTCA+TGG + chr7_4:46635067-46635086 Msa1157610:intron 35.0%
CTAGTCAAGTATGAATCAAC+GGG - chr7_4:46635182-46635201 None:intergenic 35.0%
CCTAGTCAAGTATGAATCAA+CGG - chr7_4:46635183-46635202 None:intergenic 35.0%
!!! GCTGATTCTGGTTTTTGTAT+TGG + chr7_4:46635256-46635275 Msa1157610:intron 35.0%
TAAGATTGAGGATGATCTCA+AGG + chr7_4:46635363-46635382 Msa1157610:CDS 35.0%
! GTTTGATTTCATGGATGTGA+TGG + chr7_4:46635434-46635453 Msa1157610:intron 35.0%
ATCTCACTAGTTGTCAATGA+TGG - chr7_4:46635650-46635669 None:intergenic 35.0%
! GCAAATTTTGTAATGAGCGA+CGG + chr7_4:46635802-46635821 Msa1157610:intron 35.0%
! GGATCCAAAAAGTTTAGTTC+TGG + chr7_4:46635823-46635842 Msa1157610:intron 35.0%
! TGTCCCAGAACTAAACTTTT+TGG - chr7_4:46635830-46635849 None:intergenic 35.0%
! GGGGCACTAAATTTATGATA+TGG + chr7_4:46635875-46635894 Msa1157610:intron 35.0%
TTGAAGTTCCCCTATATATG+TGG + chr7_4:46636017-46636036 Msa1157610:intron 35.0%
AAATATTAGCTGGCCACATT+AGG - chr7_4:46636106-46636125 None:intergenic 35.0%
!! GGCCAGCTAATATTTGTTTT+TGG + chr7_4:46636111-46636130 Msa1157610:intron 35.0%
ACAAATCATCCAAGACATTG+GGG - chr7_4:46636218-46636237 None:intergenic 35.0%
GACAAATCATCCAAGACATT+GGG - chr7_4:46636219-46636238 None:intergenic 35.0%
TCATTCATGGCTAAGATAGA+TGG - chr7_4:46636356-46636375 None:intergenic 35.0%
TTAGCCATGAATGAGAAACA+CGG + chr7_4:46636362-46636381 Msa1157610:intron 35.0%
!! GTGAAAGGGTGCTTATAAAA+AGG - chr7_4:46636483-46636502 None:intergenic 35.0%
!! GGTGTTTTTAAATGAACGGA+GGG + chr7_4:46636515-46636534 Msa1157610:intron 35.0%
AACTAACAGGAAGACTATCT+TGG + chr7_4:46636545-46636564 Msa1157610:intron 35.0%
AATGCATGATTTCGCTAGAA+AGG + chr7_4:46636667-46636686 Msa1157610:intron 35.0%
!!! CATTTTTTTCCCAACATGAG+AGG - chr7_4:46636776-46636795 None:intergenic 35.0%
! TTTAGAGCTAGGGGATTAAA+TGG - chr7_4:46636823-46636842 None:intergenic 35.0%
!!! TTTTGACAGCTTTAGAGCTA+GGG - chr7_4:46636833-46636852 None:intergenic 35.0%
TGACCCTAAAATAAATGGGT+CGG - chr7_4:46636864-46636883 None:intergenic 35.0%
AAGGTAATTATATGACAGGC+TGG - chr7_4:46636996-46637015 None:intergenic 35.0%
ATTGATGTGCCTTGAATTGT+CGG + chr7_4:46637024-46637043 Msa1157610:intron 35.0%
TTCTGCATATGTAACTCTGA+AGG + chr7_4:46637123-46637142 Msa1157610:intron 35.0%
!! CTGAAGGTATTTCACAATGA+TGG + chr7_4:46637139-46637158 Msa1157610:intron 35.0%
! ATTTCACAATGATGGAGTGA+TGG + chr7_4:46637147-46637166 Msa1157610:intron 35.0%
TGCAAAATAAGTAGGGACTA+TGG - chr7_4:46637348-46637367 None:intergenic 35.0%
CACGCAATGCAAAATAAGTA+GGG - chr7_4:46637355-46637374 None:intergenic 35.0%
! CGTGGATTGATATTTCTACT+TGG + chr7_4:46637371-46637390 Msa1157610:intron 35.0%
GAAAATTTGTCTTTCATGCC+AGG + chr7_4:46637399-46637418 Msa1157610:intron 35.0%
CTAAGCTGAAATAGTAAAGC+AGG - chr7_4:46637552-46637571 None:intergenic 35.0%
AGTTCGTGATCTTTCTAACT+TGG + chr7_4:46637573-46637592 Msa1157610:CDS 35.0%
TTCTAACTTGGTAAAACCAG+AGG + chr7_4:46637585-46637604 Msa1157610:CDS 35.0%
! TCTGAAGTTATAATGTCCTC+TGG - chr7_4:46637604-46637623 None:intergenic 35.0%
TGTATCCAAGTATTCACAGA+AGG + chr7_4:46637648-46637667 Msa1157610:CDS 35.0%
! TGAAACATTGACTAGCTATG+TGG + chr7_4:46637687-46637706 Msa1157610:CDS 35.0%
ACCCATTTACAATAACCACA+AGG - chr7_4:46637753-46637772 None:intergenic 35.0%
ATTTATCCAACTCCTGCTTT+CGG - chr7_4:46638234-46638253 None:intergenic 35.0%
GGATAAATTGATGCAAGATC+AGG + chr7_4:46638246-46638265 Msa1157610:CDS 35.0%
TAGCATTAGAAAAACCAAGG+TGG + chr7_4:46638394-46638413 Msa1157610:intron 35.0%
TAGAAAAACCAAGGTGGTTA+TGG + chr7_4:46638400-46638419 Msa1157610:intron 35.0%
AGAAAAACCAAGGTGGTTAT+GGG + chr7_4:46638401-46638420 Msa1157610:intron 35.0%
!! TCTGAAAGCATTCTGAGATA+TGG + chr7_4:46638647-46638666 Msa1157610:CDS 35.0%
ACTCTTCTAGACTAGAAGTT+CGG + chr7_4:46638696-46638715 Msa1157610:intron 35.0%
GATTGAACGTACTTTCTTCT+CGG - chr7_4:46638822-46638841 None:intergenic 35.0%
AAAGTACGTTCAATCCTTGA+AGG + chr7_4:46638827-46638846 Msa1157610:CDS 35.0%
AAGTACGTTCAATCCTTGAA+GGG + chr7_4:46638828-46638847 Msa1157610:CDS 35.0%
CTCAAAGGAAAAGATAACGT+GGG - chr7_4:46638975-46638994 None:intergenic 35.0%
! CACGTTATCTTTTCCTTTGA+GGG + chr7_4:46638974-46638993 Msa1157610:intron 35.0%
! ACGTTATCTTTTCCTTTGAG+GGG + chr7_4:46638975-46638994 Msa1157610:intron 35.0%
CAGTTAGGAATGCACATATT+TGG + chr7_4:46639185-46639204 Msa1157610:intron 35.0%
GAGATGCTAGAAAAACAGTT+AGG + chr7_4:46639497-46639516 Msa1157610:intron 35.0%
GCACTGCACAAATTTATTGA+GGG - chr7_4:46639702-46639721 None:intergenic 35.0%
TGCACTGCACAAATTTATTG+AGG - chr7_4:46639703-46639722 None:intergenic 35.0%
TAAATTTGTGCAGTGCATAC+TGG + chr7_4:46639706-46639725 Msa1157610:intron 35.0%
ATATATAATTGGAGCAGTCG+AGG + chr7_4:46639955-46639974 Msa1157610:three_prime_UTR 35.0%
ATGTTTGCGATATTGGTACT+CGG + chr7_4:46640058-46640077 Msa1157610:three_prime_UTR 35.0%
GTCAACTTTATACTGTTGTG+TGG + chr7_4:46640192-46640211 Msa1157610:intron 35.0%
CAACTTTATACTGTTGTGTG+GGG + chr7_4:46640194-46640213 Msa1157610:intron 35.0%
!!! TGGTGACTATTTTAATCGGT+AGG - chr7_4:46640385-46640404 None:intergenic 35.0%
TACAAAACACGACATCAAGT+CGG + chr7_4:46640495-46640514 Msa1157610:intron 35.0%
!! TGTAACATAGTAGCTTTGGA+TGG - chr7_4:46640537-46640556 None:intergenic 35.0%
!!! AGGGTTTATGGTTTTGGATA+GGG - chr7_4:46640660-46640679 None:intergenic 35.0%
!!! TAGGGTTTATGGTTTTGGAT+AGG - chr7_4:46640661-46640680 None:intergenic 35.0%
! TGCTTCCTTTTTCTTCTCTT+TGG - chr7_4:46640702-46640721 None:intergenic 35.0%
AAGTCCTTAAATAGTCCTTC+AGG + chr7_4:46640839-46640858 Msa1157610:intron 35.0%
ATATATAATTGGAGCAGTCG+AGG + chr7_4:46639955-46639974 Msa1157610:three_prime_UTR 35.0%
ATGTTTGCGATATTGGTACT+CGG + chr7_4:46640058-46640077 Msa1157610:three_prime_UTR 35.0%
GTCAACTTTATACTGTTGTG+TGG + chr7_4:46640192-46640211 Msa1157610:intron 35.0%
CAACTTTATACTGTTGTGTG+GGG + chr7_4:46640194-46640213 Msa1157610:intron 35.0%
TGTAGTATTGTCCTTACGAA+TGG + chr7_4:46642134-46642153 Msa1157610:three_prime_UTR 35.0%
GTAGTATTGTCCTTACGAAT+GGG + chr7_4:46642135-46642154 Msa1157610:three_prime_UTR 35.0%
TAAACACAATCCCATTCGTA+AGG - chr7_4:46642148-46642167 None:intergenic 35.0%
! AGAAGAGTTGTTGTTCTGGA+CGG - chr7_4:46634707-46634726 None:intergenic 40.0%
AACATTCCTAATCTCCGTGT+TGG + chr7_4:46634906-46634925 Msa1157610:CDS 40.0%
! GAGAATCTAGAGTTCCAACA+CGG - chr7_4:46634923-46634942 None:intergenic 40.0%
CAGTCTAATGCTTTCATGGA+AGG + chr7_4:46635071-46635090 Msa1157610:intron 40.0%
!! CCGTTGATTCATACTTGACT+AGG + chr7_4:46635180-46635199 Msa1157610:CDS 40.0%
!!! GTTTTTGTTTGCGCTGATTC+TGG + chr7_4:46635244-46635263 Msa1157610:intron 40.0%
CCATCAACAATCTCCTTCAA+AGG - chr7_4:46635325-46635344 None:intergenic 40.0%
! CCTTTGAAGGAGATTGTTGA+TGG + chr7_4:46635322-46635341 Msa1157610:CDS 40.0%
TAGTCAAGTCGCTAAGATTG+AGG + chr7_4:46635351-46635370 Msa1157610:CDS 40.0%
! GCTATAGTGCTATTGCATAG+CGG + chr7_4:46635532-46635551 Msa1157610:intron 40.0%
! TGATGGATCGCAGAAAATAG+CGG - chr7_4:46635633-46635652 None:intergenic 40.0%
AAACCAGTTAGCCATACAAC+AGG - chr7_4:46635703-46635722 None:intergenic 40.0%
TCATAAATTTAGTGCCCCGT+TGG - chr7_4:46635873-46635892 None:intergenic 40.0%
!!! TGTTTTTGGTTAGAAGACCC+CGG + chr7_4:46636125-46636144 Msa1157610:intron 40.0%
!!! TCTTGTTTTCCCCAATGTCT+TGG + chr7_4:46636206-46636225 Msa1157610:intron 40.0%
GGACAAATCATCCAAGACAT+TGG - chr7_4:46636220-46636239 None:intergenic 40.0%
TTTGCCGTGTTTCTCATTCA+TGG - chr7_4:46636369-46636388 None:intergenic 40.0%
! AGGGTGCTTATAAAAAGGGA+CGG - chr7_4:46636478-46636497 None:intergenic 40.0%
!! GGGTGTTTTTAAATGAACGG+AGG + chr7_4:46636514-46636533 Msa1157610:intron 40.0%
AGCTAGGGGATTAAATGGTT+GGG - chr7_4:46636818-46636837 None:intergenic 40.0%
!! TTTGACAGCTTTAGAGCTAG+GGG - chr7_4:46636832-46636851 None:intergenic 40.0%
!!! GTTTTGACAGCTTTAGAGCT+AGG - chr7_4:46636834-46636853 None:intergenic 40.0%
!!! CACCCGACCCATTTATTTTA+GGG + chr7_4:46636858-46636877 Msa1157610:intron 40.0%
GACCCTAAAATAAATGGGTC+GGG - chr7_4:46636863-46636882 None:intergenic 40.0%
CGGCTGACCCTAAAATAAAT+GGG - chr7_4:46636868-46636887 None:intergenic 40.0%
!!! CCATTTATTTTAGGGTCAGC+CGG + chr7_4:46636866-46636885 Msa1157610:intron 40.0%
CCACGCAATGCAAAATAAGT+AGG - chr7_4:46637356-46637375 None:intergenic 40.0%
!!! CCTACTTATTTTGCATTGCG+TGG + chr7_4:46637353-46637372 Msa1157610:intron 40.0%
GCTATTAACCGAAAGCAAAC+TGG + chr7_4:46637463-46637482 Msa1157610:CDS 40.0%
TTAACCGAAAGCAAACTGGA+AGG + chr7_4:46637467-46637486 Msa1157610:CDS 40.0%
CCAATCCTTCTGTGAATACT+TGG - chr7_4:46637656-46637675 None:intergenic 40.0%
CCAAGTATTCACAGAAGGAT+TGG + chr7_4:46637653-46637672 Msa1157610:CDS 40.0%
TGTAACACTCTTCAATCGTG+TGG + chr7_4:46637961-46637980 Msa1157610:CDS 40.0%
AGAACTAGTGCACGTGAAAA+AGG + chr7_4:46637995-46638014 Msa1157610:CDS 40.0%
GAACTAGTGCACGTGAAAAA+GGG + chr7_4:46637996-46638015 Msa1157610:CDS 40.0%
ATACAGTCCAGAAACACATG+AGG + chr7_4:46638207-46638226 Msa1157610:CDS 40.0%
TACAGTCCAGAAACACATGA+GGG + chr7_4:46638208-46638227 Msa1157610:CDS 40.0%
TGCAAGATCAGGAAAGTTTG+AGG + chr7_4:46638257-46638276 Msa1157610:CDS 40.0%
GCAAGATCAGGAAAGTTTGA+GGG + chr7_4:46638258-46638277 Msa1157610:CDS 40.0%
CAAGATCAGGAAAGTTTGAG+GGG + chr7_4:46638259-46638278 Msa1157610:CDS 40.0%
GCATAATACCTCTCCATAAC+TGG - chr7_4:46638308-46638327 None:intergenic 40.0%
TACATTTCCCATAACCACCT+TGG - chr7_4:46638411-46638430 None:intergenic 40.0%
CGTGTTATCCTAAAATGCCA+TGG + chr7_4:46638543-46638562 Msa1157610:intron 40.0%
! GAGAAGAACCATGGCATTTT+AGG - chr7_4:46638554-46638573 None:intergenic 40.0%
! GAGTAGAGTACCAAGAAAGA+CGG - chr7_4:46638680-46638699 None:intergenic 40.0%
AAAAAATGTTGTTCGGGGGA+AGG - chr7_4:46638730-46638749 None:intergenic 40.0%
GAAGACCCAATAATGATCAG+TGG - chr7_4:46638759-46638778 None:intergenic 40.0%
! TTCTTCTCGGCTTTTACAGA+TGG - chr7_4:46638809-46638828 None:intergenic 40.0%
TACCAAGCCTGATTAACTGA+TGG + chr7_4:46638940-46638959 Msa1157610:intron 40.0%
ATCCATCAGTTAATCAGGCT+TGG - chr7_4:46638945-46638964 None:intergenic 40.0%
CCTCAAAGGAAAAGATAACG+TGG - chr7_4:46638976-46638995 None:intergenic 40.0%
! CCACGTTATCTTTTCCTTTG+AGG + chr7_4:46638973-46638992 Msa1157610:intron 40.0%
!! CGTTATCTTTTCCTTTGAGG+GGG + chr7_4:46638976-46638995 Msa1157610:intron 40.0%
!!! GGTTGTTCACTTGTTTTTGC+TGG + chr7_4:46639001-46639020 Msa1157610:intron 40.0%
CAAACCACAAAACACTGTAC+TGG + chr7_4:46639343-46639362 Msa1157610:intron 40.0%
GTAAAGCATAATACAGGGGA+TGG - chr7_4:46639568-46639587 None:intergenic 40.0%
ATACTGGAAAACCGATGAAG+AGG + chr7_4:46639722-46639741 Msa1157610:CDS 40.0%
!! CTTCAAATCCTTTCTGGCTT+TGG - chr7_4:46639893-46639912 None:intergenic 40.0%
ACGGGGTCTAATGAATTTCA+TGG + chr7_4:46639983-46640002 Msa1157610:three_prime_UTR 40.0%
CGGGGTCTAATGAATTTCAT+GGG + chr7_4:46639984-46640003 Msa1157610:three_prime_UTR 40.0%
TGTTTGCGATATTGGTACTC+GGG + chr7_4:46640059-46640078 Msa1157610:three_prime_UTR 40.0%
ATAATACAGTCATGTGTGGG+AGG + chr7_4:46640116-46640135 Msa1157610:intron 40.0%
TAATACAGTCATGTGTGGGA+GGG + chr7_4:46640117-46640136 Msa1157610:intron 40.0%
AATAAGCGCTAAACTGGCAT+TGG + chr7_4:46640454-46640473 Msa1157610:intron 40.0%
TCATAGGGTAAGATTAAGGG+AGG + chr7_4:46640581-46640600 Msa1157610:intron 40.0%
GAAGCAAAAATTGTGGGTGA+AGG + chr7_4:46640716-46640735 Msa1157610:intron 40.0%
! ATGACCGATTTCTAGAGAGA+AGG + chr7_4:46640748-46640767 Msa1157610:intron 40.0%
! TGACCGATTTCTAGAGAGAA+GGG + chr7_4:46640749-46640768 Msa1157610:intron 40.0%
! TCTCCCTTCTCTCTAGAAAT+CGG - chr7_4:46640755-46640774 None:intergenic 40.0%
CTCTTCACTTTCTCTCACTA+GGG - chr7_4:46640796-46640815 None:intergenic 40.0%
ATAATGGTAATTGCGCCTGA+AGG - chr7_4:46640857-46640876 None:intergenic 40.0%
! TTAAGCGCGTTTAAGACTAG+AGG - chr7_4:46640881-46640900 None:intergenic 40.0%
GCGCTTAAACTATCGTTAAC+AGG + chr7_4:46640893-46640912 Msa1157610:intron 40.0%
!! CTTCAAATCCTTTCTGGCTT+TGG - chr7_4:46639893-46639912 None:intergenic 40.0%
ACGGGGTCTAATGAATTTCA+TGG + chr7_4:46639983-46640002 Msa1157610:three_prime_UTR 40.0%
CGGGGTCTAATGAATTTCAT+GGG + chr7_4:46639984-46640003 Msa1157610:three_prime_UTR 40.0%
TGTTTGCGATATTGGTACTC+GGG + chr7_4:46640059-46640078 Msa1157610:three_prime_UTR 40.0%
ATAATACAGTCATGTGTGGG+AGG + chr7_4:46640116-46640135 Msa1157610:intron 40.0%
TAATACAGTCATGTGTGGGA+GGG + chr7_4:46640117-46640136 Msa1157610:intron 40.0%
CGAATGGGATTGTGTTTAAG+TGG + chr7_4:46642150-46642169 Msa1157610:three_prime_UTR 40.0%
GGATTGTGTTTAAGTGGTTG+TGG + chr7_4:46642156-46642175 Msa1157610:three_prime_UTR 40.0%
! AAGAGTTGTTGTTCTGGACG+GGG - chr7_4:46634705-46634724 None:intergenic 45.0%
! GAAGAGTTGTTGTTCTGGAC+GGG - chr7_4:46634706-46634725 None:intergenic 45.0%
!! TCTGTAGAGAGGAGTATCGA+AGG - chr7_4:46634773-46634792 None:intergenic 45.0%
AGAGTTCCAACACGGAGATT+AGG - chr7_4:46634915-46634934 None:intergenic 45.0%
! AAGGTGTTTCGAGCAAGATC+AGG + chr7_4:46635090-46635109 Msa1157610:CDS 45.0%
ATCAACGGGAACTCCATCAA+CGG - chr7_4:46635168-46635187 None:intergenic 45.0%
TCCTTCAAAGGCGACATAGT+GGG - chr7_4:46635313-46635332 None:intergenic 45.0%
TTGCCTGTTGTATGGCTAAC+TGG + chr7_4:46635697-46635716 Msa1157610:intron 45.0%
GAGTGCAAATGCTCCTAATG+TGG + chr7_4:46636090-46636109 Msa1157610:intron 45.0%
CAACAACTTCTACCCCATCT+TGG - chr7_4:46636156-46636175 None:intergenic 45.0%
TTGGTCCTCATCTGCAATGT+TGG + chr7_4:46636262-46636281 Msa1157610:intron 45.0%
TGAAGCCAACATTGCAGATG+AGG - chr7_4:46636270-46636289 None:intergenic 45.0%
GTGCTTATAAAAAGGGACGG+AGG - chr7_4:46636475-46636494 None:intergenic 45.0%
ACCCTTTCACACTCACTGAA+GGG + chr7_4:46636493-46636512 Msa1157610:intron 45.0%
!! GGAGGGAGTACTTAACTAAC+AGG + chr7_4:46636532-46636551 Msa1157610:intron 45.0%
AACGCTTAGAAACAGATGGG+TGG + chr7_4:46636586-46636605 Msa1157610:intron 45.0%
TTATTGATCTAAGGGGGGAG+TGG + chr7_4:46636748-46636767 Msa1157610:intron 45.0%
GAGCTAGGGGATTAAATGGT+TGG - chr7_4:46636819-46636838 None:intergenic 45.0%
CCTAAAATAAATGGGTCGGG+TGG - chr7_4:46636860-46636879 None:intergenic 45.0%
!! CCACCCGACCCATTTATTTT+AGG + chr7_4:46636857-46636876 Msa1157610:intron 45.0%
CCGGCTGACCCTAAAATAAA+TGG - chr7_4:46636869-46636888 None:intergenic 45.0%
GGTCAGCCGGAATAAACTTT+GGG + chr7_4:46636879-46636898 Msa1157610:intron 45.0%
TATACTCGGAAACACGAACC+TGG - chr7_4:46637420-46637439 None:intergenic 45.0%
CTTGGATACAATCGCAAGCA+GGG - chr7_4:46637638-46637657 None:intergenic 45.0%
ACTTGGATACAATCGCAAGC+AGG - chr7_4:46637639-46637658 None:intergenic 45.0%
!! CAATGGTGCTATGCCAGTTA+TGG + chr7_4:46638292-46638311 Msa1157610:CDS 45.0%
!! CTGTTTTTCACTAGCCTCTC+AGG + chr7_4:46638481-46638500 Msa1157610:intron 45.0%
TCACTCCATAATGTCAGCCT+CGG - chr7_4:46638507-46638526 None:intergenic 45.0%
!! TTCTGAAGGTTTTCAGCTCC+TGG + chr7_4:46638597-46638616 Msa1157610:intron 45.0%
! TAGAGTACCAAGAAAGACGG+AGG - chr7_4:46638677-46638696 None:intergenic 45.0%
!! TTGGGTCTTCTGTTGATTCC+AGG + chr7_4:46638769-46638788 Msa1157610:intron 45.0%
AGCTATCACTCAACCCTTCA+AGG - chr7_4:46638844-46638863 None:intergenic 45.0%
GGTTGAGTGATAGCTCAAAC+AGG + chr7_4:46638849-46638868 Msa1157610:CDS 45.0%
!! TATCTTTTCCTTTGAGGGGG+AGG + chr7_4:46638979-46638998 Msa1157610:intron 45.0%
!! ATCTTTTCCTTTGAGGGGGA+GGG + chr7_4:46638980-46638999 Msa1157610:intron 45.0%
! GAGACCAGTACAGTGTTTTG+TGG - chr7_4:46639350-46639369 None:intergenic 45.0%
TGGAAAACCGATGAAGAGGT+AGG + chr7_4:46639726-46639745 Msa1157610:CDS 45.0%
AGATCCGTTAAGGGTTCTCT+TGG + chr7_4:46639855-46639874 Msa1157610:three_prime_UTR 45.0%
CTGTCCAAGAGAACCCTTAA+CGG - chr7_4:46639862-46639881 None:intergenic 45.0%
!! CCTTTCTGGCTTTGGCATTA+TGG - chr7_4:46639885-46639904 None:intergenic 45.0%
CCATAATGCCAAAGCCAGAA+AGG + chr7_4:46639882-46639901 Msa1157610:three_prime_UTR 45.0%
ATACAAGTGGACAGTGATCC+TGG - chr7_4:46640022-46640041 None:intergenic 45.0%
ATGTGTGGGAGGGATACTTA+TGG + chr7_4:46640127-46640146 Msa1157610:intron 45.0%
GGAGGATCATGAGTAGAAAG+AGG + chr7_4:46640599-46640618 Msa1157610:intron 45.0%
CCTCTTCACTTTCTCTCACT+AGG - chr7_4:46640797-46640816 None:intergenic 45.0%
CCTAGTGAGAGAAAGTGAAG+AGG + chr7_4:46640794-46640813 Msa1157610:intron 45.0%
TGCGCCTGAAGGACTATTTA+AGG - chr7_4:46640846-46640865 None:intergenic 45.0%
AGATCCGTTAAGGGTTCTCT+TGG + chr7_4:46639855-46639874 Msa1157610:three_prime_UTR 45.0%
CTGTCCAAGAGAACCCTTAA+CGG - chr7_4:46639862-46639881 None:intergenic 45.0%
!! CCTTTCTGGCTTTGGCATTA+TGG - chr7_4:46639885-46639904 None:intergenic 45.0%
CCATAATGCCAAAGCCAGAA+AGG + chr7_4:46639882-46639901 Msa1157610:three_prime_UTR 45.0%
ATACAAGTGGACAGTGATCC+TGG - chr7_4:46640022-46640041 None:intergenic 45.0%
ATGTGTGGGAGGGATACTTA+TGG + chr7_4:46640127-46640146 Msa1157610:intron 45.0%
!! TTCAAAAATATAAAATTTAA+AGG - chr7_4:46639059-46639078 None:intergenic 5.0%
!! TGTTATTATTTATATATAAT+TGG + chr7_4:46639944-46639963 Msa1157610:three_prime_UTR 5.0%
!! TGTTATTATTTATATATAAT+TGG + chr7_4:46639944-46639963 Msa1157610:three_prime_UTR 5.0%
!! AATGGCAAACAGGTACTGGG+TGG + chr7_4:46634672-46634691 Msa1157610:exon 50.0%
CTTGGTGAGATCATCGCTGA+GGG - chr7_4:46634952-46634971 None:intergenic 50.0%
CAGGCGTCAGATTGAAGAAC+TGG + chr7_4:46635109-46635128 Msa1157610:CDS 50.0%
GAAGAACTGGAGCGAGTTTC+CGG + chr7_4:46635122-46635141 Msa1157610:CDS 50.0%
! GTTTCCGGTGTTAACACTGC+TGG + chr7_4:46635137-46635156 Msa1157610:CDS 50.0%
GAGACCAGCAGTGTTAACAC+CGG - chr7_4:46635144-46635163 None:intergenic 50.0%
TCCCACTATGTCGCCTTTGA+AGG + chr7_4:46635309-46635328 Msa1157610:CDS 50.0%
CTCCTTCAAAGGCGACATAG+TGG - chr7_4:46635314-46635333 None:intergenic 50.0%
TACCCCATCTTGGACAAACC+GGG - chr7_4:46636146-46636165 None:intergenic 50.0%
CTACCCCATCTTGGACAAAC+CGG - chr7_4:46636147-46636166 None:intergenic 50.0%
!! CTGCAATGTTGGCTTCAGCT+CGG + chr7_4:46636273-46636292 Msa1157610:intron 50.0%
CACCCTTTCACACTCACTGA+AGG + chr7_4:46636492-46636511 Msa1157610:intron 50.0%
CCCCTTCAGTGAGTGTGAAA+GGG - chr7_4:46636497-46636516 None:intergenic 50.0%
CCCTTTCACACTCACTGAAG+GGG + chr7_4:46636494-46636513 Msa1157610:intron 50.0%
ACCCCTTCAGTGAGTGTGAA+AGG - chr7_4:46636498-46636517 None:intergenic 50.0%
GGAGTGGATCCTCTCATGTT+GGG + chr7_4:46636764-46636783 Msa1157610:intron 50.0%
GGGTCAGCCGGAATAAACTT+TGG + chr7_4:46636878-46636897 Msa1157610:intron 50.0%
ACATTTGCAGACTGTGGGCT+TGG + chr7_4:46636966-46636985 Msa1157610:intron 50.0%
GCAGTATAACCAAGTGGACG+TGG - chr7_4:46637051-46637070 None:intergenic 50.0%
! CGCACCTTCCAGTTTGCTTT+CGG - chr7_4:46637474-46637493 None:intergenic 50.0%
CGAAAGCAAACTGGAAGGTG+CGG + chr7_4:46637472-46637491 Msa1157610:intron 50.0%
TTTCGGCCCTCATGTGTTTC+TGG - chr7_4:46638217-46638236 None:intergenic 50.0%
GTGCTATGCCAGTTATGGAG+AGG + chr7_4:46638297-46638316 Msa1157610:CDS 50.0%
GTTGTCAGCGAGAAGAACCA+TGG - chr7_4:46638563-46638582 None:intergenic 50.0%
! CACAGCACAAAAGTGCATCC+AGG - chr7_4:46638618-46638637 None:intergenic 50.0%
TGGATTGCCTCCGTCTTTCT+TGG + chr7_4:46638667-46638686 Msa1157610:CDS 50.0%
ATGGAGCTAAGACACATGCC+TGG - chr7_4:46638790-46638809 None:intergenic 50.0%
TCCAGCACCTACCTCTTCAT+CGG - chr7_4:46639736-46639755 None:intergenic 50.0%
!! TGAAGAGGTAGGTGCTGGAA+TGG + chr7_4:46639737-46639756 Msa1157610:CDS 50.0%
GAGTATCTGCTTCACCAGCT+AGG - chr7_4:46639767-46639786 None:intergenic 50.0%
CAATCTTCTCTGAGCGCAAC+TGG + chr7_4:46639809-46639828 Msa1157610:exon 50.0%
TGGAGCAGTCGAGGTTTCAA+CGG + chr7_4:46639964-46639983 Msa1157610:three_prime_UTR 50.0%
GTGGACAGTGATCCTGGAAA+CGG - chr7_4:46640016-46640035 None:intergenic 50.0%
TTTAATCGGTAGGACCCGTG+CGG - chr7_4:46640375-46640394 None:intergenic 50.0%
CAATCTTCTCTGAGCGCAAC+TGG + chr7_4:46639809-46639828 Msa1157610:exon 50.0%
TGGAGCAGTCGAGGTTTCAA+CGG + chr7_4:46639964-46639983 Msa1157610:three_prime_UTR 50.0%
GTGGACAGTGATCCTGGAAA+CGG - chr7_4:46640016-46640035 None:intergenic 50.0%
CCTTGGTGAGATCATCGCTG+AGG - chr7_4:46634953-46634972 None:intergenic 55.0%
CCTCAGCGATGATCTCACCA+AGG + chr7_4:46634950-46634969 Msa1157610:CDS 55.0%
! ACTGCTGGTCTCACCGTTGA+TGG + chr7_4:46635152-46635171 Msa1157610:CDS 55.0%
! AGACCCCGGTTTGTCCAAGA+TGG + chr7_4:46636139-46636158 Msa1157610:intron 55.0%
! GACCCCGGTTTGTCCAAGAT+GGG + chr7_4:46636140-46636159 Msa1157610:intron 55.0%
! ACCCCGGTTTGTCCAAGATG+GGG + chr7_4:46636141-46636160 Msa1157610:intron 55.0%
ACCCCATCTTGGACAAACCG+GGG - chr7_4:46636145-46636164 None:intergenic 55.0%
GGGAGTGGATCCTCTCATGT+TGG + chr7_4:46636763-46636782 Msa1157610:intron 55.0%
CCCACAGTCTGCAAATGTCC+GGG - chr7_4:46636964-46636983 None:intergenic 55.0%
CCCGGACATTTGCAGACTGT+GGG + chr7_4:46636961-46636980 Msa1157610:intron 55.0%
GCCCACAGTCTGCAAATGTC+CGG - chr7_4:46636965-46636984 None:intergenic 55.0%
TTTGCAGACTGTGGGCTTGG+CGG + chr7_4:46636969-46636988 Msa1157610:intron 55.0%
GGACGTGGTCCGACAATTCA+AGG - chr7_4:46637036-46637055 None:intergenic 55.0%
ATTGTCGGACCACGTCCACT+TGG + chr7_4:46637039-46637058 Msa1157610:intron 55.0%
AACACATGAGGGCCGAAAGC+AGG + chr7_4:46638219-46638238 Msa1157610:CDS 55.0%
TGAGGGGTTCTCTGCTGCAA+TGG + chr7_4:46638275-46638294 Msa1157610:CDS 55.0%
TCAGGCCGAGGCTGACATTA+TGG + chr7_4:46638499-46638518 Msa1157610:intron 55.0%
TGAACAACCCTCCCCCTCAA+AGG - chr7_4:46638990-46639009 None:intergenic 55.0%
ACCGATGAAGAGGTAGGTGC+TGG + chr7_4:46639732-46639751 Msa1157610:CDS 55.0%
GGAGCAGTCGAGGTTTCAAC+GGG + chr7_4:46639965-46639984 Msa1157610:three_prime_UTR 55.0%
GAGCAGTCGAGGTTTCAACG+GGG + chr7_4:46639966-46639985 Msa1157610:three_prime_UTR 55.0%
GGAGCAGTCGAGGTTTCAAC+GGG + chr7_4:46639965-46639984 Msa1157610:three_prime_UTR 55.0%
GAGCAGTCGAGGTTTCAACG+GGG + chr7_4:46639966-46639985 Msa1157610:three_prime_UTR 55.0%
GCCCGGACATTTGCAGACTG+TGG + chr7_4:46636960-46636979 Msa1157610:intron 60.0%
TTGCAGACTGTGGGCTTGGC+GGG + chr7_4:46636970-46636989 Msa1157610:intron 60.0%
TGAGGGCCGAAAGCAGGAGT+TGG + chr7_4:46638225-46638244 Msa1157610:CDS 60.0%
! TTCACTAGCCTCTCAGGCCG+AGG + chr7_4:46638487-46638506 Msa1157610:intron 60.0%
AATGTCAGCCTCGGCCTGAG+AGG - chr7_4:46638498-46638517 None:intergenic 60.0%
!! GAGGTAGGTGCTGGAATGGC+TGG + chr7_4:46639741-46639760 Msa1157610:CDS 60.0%
CATGGGCAGAGTCCGTTTCC+AGG + chr7_4:46640001-46640020 Msa1157610:three_prime_UTR 60.0%
CATGGGCAGAGTCCGTTTCC+AGG + chr7_4:46640001-46640020 Msa1157610:three_prime_UTR 60.0%
!! GCTGGAATGGCTGGCCTAGC+TGG + chr7_4:46639750-46639769 Msa1157610:CDS 65.0%
TTGACGACCCGTGCGCCGCA+CGG + chr7_4:46640357-46640376 Msa1157610:intron 70.0%
TGACGACCCGTGCGCCGCAC+GGG + chr7_4:46640358-46640377 Msa1157610:intron 75.0%
GTAGGACCCGTGCGGCGCAC+GGG - chr7_4:46640367-46640386 None:intergenic 75.0%
GGTAGGACCCGTGCGGCGCA+CGG - chr7_4:46640368-46640387 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 46634600 46642179 46634600 ID=Msa1157610;Name=Msa1157610
chr7_4 mRNA 46634600 46642179 46634600 ID=Msa1157610-mRNA-1;Parent=Msa1157610;Name=Msa1157610-mRNA-1;_AED=0.14;_eAED=0.14;_QI=73|1|1|1|0.90|0.83|12|581|378
chr7_4 exon 46634600 46634792 46634600 ID=Msa1157610-mRNA-1:exon:12237;Parent=Msa1157610-mRNA-1
chr7_4 exon 46634903 46634971 46634903 ID=Msa1157610-mRNA-1:exon:12238;Parent=Msa1157610-mRNA-1
chr7_4 exon 46635074 46635201 46635074 ID=Msa1157610-mRNA-1:exon:12239;Parent=Msa1157610-mRNA-1
chr7_4 exon 46635285 46635384 46635285 ID=Msa1157610-mRNA-1:exon:12240;Parent=Msa1157610-mRNA-1
chr7_4 exon 46637421 46637488 46637421 ID=Msa1157610-mRNA-1:exon:12241;Parent=Msa1157610-mRNA-1
chr7_4 exon 46637567 46637708 46637567 ID=Msa1157610-mRNA-1:exon:12242;Parent=Msa1157610-mRNA-1
chr7_4 exon 46637908 46638024 46637908 ID=Msa1157610-mRNA-1:exon:12243;Parent=Msa1157610-mRNA-1
chr7_4 exon 46638193 46638318 46638193 ID=Msa1157610-mRNA-1:exon:12244;Parent=Msa1157610-mRNA-1
chr7_4 exon 46638605 46638688 46638605 ID=Msa1157610-mRNA-1:exon:12245;Parent=Msa1157610-mRNA-1
chr7_4 exon 46638791 46638870 46638791 ID=Msa1157610-mRNA-1:exon:12246;Parent=Msa1157610-mRNA-1
chr7_4 exon 46639719 46640099 46639719 ID=Msa1157610-mRNA-1:exon:12247;Parent=Msa1157610-mRNA-1
chr7_4 exon 46641877 46642179 46641877 ID=Msa1157610-mRNA-1:exon:12248;Parent=Msa1157610-mRNA-1
chr7_4 five_prime_UTR 46634600 46634672 46634600 ID=Msa1157610-mRNA-1:five_prime_utr;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46634673 46634792 46634673 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46634903 46634971 46634903 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46635074 46635201 46635074 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46635285 46635384 46635285 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46637421 46637488 46637421 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46637567 46637708 46637567 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46637908 46638024 46637908 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46638193 46638318 46638193 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46638605 46638688 46638605 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46638791 46638870 46638791 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 CDS 46639719 46639821 46639719 ID=Msa1157610-mRNA-1:cds;Parent=Msa1157610-mRNA-1
chr7_4 three_prime_UTR 46639822 46640099 46639822 ID=Msa1157610-mRNA-1:three_prime_utr;Parent=Msa1157610-mRNA-1
chr7_4 three_prime_UTR 46641877 46642179 46641877 ID=Msa1157610-mRNA-1:three_prime_utr;Parent=Msa1157610-mRNA-1
Gene Sequence

>Msa1157610

ATGGCAAACAGGTACTGGGTGGTGTCTCTCCCCGTCCAGAACAACAACTCTTCTTCTTCGATTTGGAACCAATTGCAGCAAAATATCTCTAAGCATTCCTTCGATACTCCTCTCTACAGATTCAACATTCCTAATCTCCGTGTTGGAACTCTAGATTCTCTTCTCTCCCTCAGCGATGATCTCACCAAGTCTAATGCTTTCATGGAAGGTGTTTCGAGCAAGATCAGGCGTCAGATTGAAGAACTGGAGCGAGTTTCCGGTGTTAACACTGCTGGTCTCACCGTTGATGGAGTTCCCGTTGATTCATACTTGACTAGATTTGTTTGGGACGATGCTAAGTATCCCACTATGTCGCCTTTGAAGGAGATTGTTGATGGCATTCATAGTCAAGTCGCTAAGATTGAGGATGATCTCAAGGTTCGTGTTTCCGAGTATAATAATATTCGAAGTCAGCTCAATGCTATTAACCGAAAGCAAACTGGAAGCTTAGCAGTTCGTGATCTTTCTAACTTGGTAAAACCAGAGGACATTATAACTTCAGAACATTTAACTACCCTGCTTGCGATTGTATCCAAGTATTCACAGAAGGATTGGCTTGAAAGCTATGAAACATTGACTAGCTATGTGGTCCCAAGATCTTCTAAGAAGTTGTATGAGGATAATGAATATGCTCTTTATACTGTAACACTCTTCAATCGTGTGGCAGACAATTTTAGAACTAGTGCACGTGAAAAAGGGTTCCAAATTCGTGATTTTGAATACAGTCCAGAAACACATGAGGGCCGAAAGCAGGAGTTGGATAAATTGATGCAAGATCAGGAAAGTTTGAGGGGTTCTCTGCTGCAATGGTGCTATGCCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTGTGCGCTTATTTTCTGAAAGCATTCTGAGATATGGATTGCCTCCGTCTTTCTTGGCATGTGTCTTAGCTCCATCTGTAAAAGCCGAGAAGAAAGTACGTTCAATCCTTGAAGGGTTGAGTGATAGCTCAAACAGTGCATACTGGAAAACCGATGAAGAGGTAGGTGCTGGAATGGCTGGCCTAGCTGGTGAAGCAGATACTCACCCATATGTTTCTTTCACTATCAATCTTCTCTGA
Protein sequence

>Msa1157610

MANRYWVVSLPVQNNNSSSSIWNQLQQNISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLTKSNAFMEGVSSKIRRQIEELERVSGVNTAGLTVDGVPVDSYLTRFVWDDAKYPTMSPLKEIVDGIHSQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEHLTTLLAIVSKYSQKDWLESYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHEGRKQELDKLMQDQESLRGSLLQWCYASYGEVFSSWMHFCAVRLFSESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDSSNSAYWKTDEEVGAGMAGLAGEADTHPYVSFTINLL*