Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396100 | XP_013469351.1 | 98.083 | 626 | 11 | 1 | 1 | 626 | 1 | 625 | 0.0 | 1246 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396100 | sp|Q0WQF7|ODP21_ARATH | 61.838 | 642 | 224 | 6 | 1 | 626 | 1 | 637 | 0.0 | 734 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396100 | A0A072VN38 | 98.083 | 626 | 11 | 1 | 1 | 626 | 1 | 625 | 0.0 | 1246 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0035730 | Msa1396100 | 0.997931 | 2.906313e-252 | -8.615850e-47 |
Msa0083820 | Msa1396100 | 0.832379 | 9.777139e-56 | -8.615850e-47 |
Msa1396100 | Msa1402010 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
Msa1396100 | Msa1447120 | 0.803952 | 2.726200e-49 | -8.615850e-47 |
Msa1396100 | Msa1449920 | 0.815298 | 9.933110e-52 | -8.615850e-47 |
Msa1396100 | Msa1458000 | 0.806347 | 8.598052e-50 | -8.615850e-47 |
Msa0605530 | Msa1396100 | 0.823821 | 1.126846e-53 | -8.615850e-47 |
Msa0656320 | Msa1396100 | 0.802562 | 5.289161e-49 | -8.615850e-47 |
Msa0661480 | Msa1396100 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
Msa0695760 | Msa1396100 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
Msa0700120 | Msa1396100 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
Msa0773960 | Msa1396100 | 0.809821 | 1.565743e-50 | -8.615850e-47 |
Msa0173250 | Msa1396100 | 0.811288 | 7.546000e-51 | -8.615850e-47 |
Msa0180210 | Msa1396100 | 0.814343 | 1.617302e-51 | -8.615850e-47 |
Msa0183720 | Msa1396100 | 0.805868 | 1.084403e-49 | -8.615850e-47 |
Msa0195230 | Msa1396100 | 0.816816 | 4.549588e-52 | -8.615850e-47 |
Msa0195260 | Msa1396100 | 0.815526 | 8.835015e-52 | -8.615850e-47 |
Msa0234170 | Msa1396100 | 0.817781 | 2.760427e-52 | -8.615850e-47 |
Msa1226370 | Msa1396100 | 0.815744 | 7.901253e-52 | -8.615850e-47 |
Msa1342760 | Msa1396100 | 0.805380 | 1.372606e-49 | -8.615850e-47 |
Msa0368640 | Msa1396100 | 0.853611 | 2.131526e-61 | -8.615850e-47 |
Msa0389690 | Msa1396100 | 0.869591 | 2.761195e-66 | -8.615850e-47 |
Msa0416020 | Msa1396100 | 0.803214 | 3.879656e-49 | -8.615850e-47 |
Msa0427420 | Msa1396100 | 0.804869 | 1.756424e-49 | -8.615850e-47 |
Msa0437500 | Msa1396100 | 0.809272 | 2.054240e-50 | -8.615850e-47 |
Msa0458100 | Msa1396100 | 0.801881 | 7.302332e-49 | -8.615850e-47 |
Msa0480280 | Msa1396100 | 0.827184 | 1.800187e-54 | -8.615850e-47 |
Msa0981670 | Msa1396100 | 0.814765 | 1.303856e-51 | -8.615850e-47 |
Msa0240540 | Msa1396100 | 0.817035 | 4.062243e-52 | -8.615850e-47 |
Msa0276860 | Msa1396100 | 0.814016 | 1.909406e-51 | -8.615850e-47 |
Msa0279000 | Msa1396100 | 0.826422 | 2.736109e-54 | -8.615850e-47 |
Msa0316020 | Msa1396100 | 0.800108 | 1.681974e-48 | -8.615850e-47 |
Msa0318490 | Msa1396100 | 0.809012 | 2.334736e-50 | -8.615850e-47 |
Msa0328870 | Msa1396100 | 0.802387 | 5.746311e-49 | -8.615850e-47 |
Msa1157610 | Msa1396100 | 0.803496 | 3.391213e-49 | -8.615850e-47 |
Msa1179340 | Msa1396100 | 0.813148 | 2.964415e-51 | -8.615850e-47 |
Msa0506750 | Msa1396100 | 0.839277 | 1.744681e-57 | -8.615850e-47 |
Msa0508180 | Msa1396100 | 0.801039 | 1.086871e-48 | -8.615850e-47 |
Msa0525880 | Msa1396100 | 0.811367 | 7.252623e-51 | -8.615850e-47 |
Msa0563090 | Msa1396100 | 0.806835 | 6.783537e-50 | -8.615850e-47 |
Msa0930770 | Msa1396100 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396100 | MtrunA17_Chr1g0197901 | 98.083 | 626 | 11 | 1 | 1 | 626 | 1 | 625 | 0.0 | 1246 |
Msa1396100 | MtrunA17_Chr8g0343061 | 41.138 | 457 | 221 | 8 | 196 | 626 | 109 | 543 | 9.09e-106 | 330 |
Msa1396100 | MtrunA17_Chr8g0343061 | 64.130 | 92 | 32 | 1 | 67 | 157 | 105 | 196 | 5.78e-32 | 130 |
Msa1396100 | MtrunA17_Chr1g0210021 | 30.947 | 433 | 272 | 10 | 206 | 626 | 53 | 470 | 8.43e-48 | 174 |
Msa1396100 | MtrunA17_Chr1g0210021 | 46.154 | 78 | 41 | 1 | 80 | 157 | 53 | 129 | 1.68e-13 | 73.2 |
Msa1396100 | MtrunA17_Chr1g0200441 | 30.180 | 444 | 260 | 10 | 206 | 626 | 41 | 457 | 1.38e-40 | 154 |
Msa1396100 | MtrunA17_Chr1g0200441 | 48.750 | 80 | 38 | 2 | 80 | 158 | 41 | 118 | 5.15e-14 | 74.7 |
Msa1396100 | MtrunA17_Chr5g0444531 | 28.728 | 456 | 250 | 11 | 177 | 626 | 67 | 453 | 2.48e-40 | 153 |
Msa1396100 | MtrunA17_Chr2g0277631 | 29.386 | 456 | 248 | 14 | 177 | 626 | 64 | 451 | 3.76e-40 | 152 |
Msa1396100 | MtrunA17_Chr4g0067561 | 27.338 | 417 | 274 | 10 | 218 | 612 | 94 | 503 | 2.27e-31 | 128 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396100 | AT3G52200.1 | 61.838 | 642 | 224 | 6 | 1 | 626 | 1 | 637 | 0.0 | 734 |
Msa1396100 | AT3G52200.2 | 66.146 | 576 | 191 | 4 | 54 | 626 | 139 | 713 | 0.0 | 733 |
Msa1396100 | AT3G13930.1 | 42.325 | 456 | 218 | 10 | 195 | 626 | 105 | 539 | 1.31e-107 | 335 |
Msa1396100 | AT3G13930.1 | 66.667 | 93 | 30 | 1 | 67 | 158 | 102 | 194 | 3.21e-33 | 134 |
Msa1396100 | AT1G54220.1 | 41.794 | 457 | 217 | 9 | 196 | 626 | 106 | 539 | 1.63e-107 | 335 |
Msa1396100 | AT1G54220.1 | 47.826 | 161 | 62 | 5 | 4 | 157 | 48 | 193 | 1.07e-32 | 133 |
Msa1396100 | AT1G54220.2 | 41.794 | 457 | 217 | 9 | 196 | 626 | 106 | 539 | 1.63e-107 | 335 |
Msa1396100 | AT1G54220.2 | 47.826 | 161 | 62 | 5 | 4 | 157 | 48 | 193 | 1.07e-32 | 133 |
Msa1396100 | AT3G25860.1 | 30.858 | 431 | 264 | 11 | 206 | 621 | 60 | 471 | 1.43e-39 | 152 |
Msa1396100 | AT3G25860.1 | 45.714 | 70 | 37 | 1 | 80 | 149 | 60 | 128 | 1.50e-11 | 67.4 |
Msa1396100 | AT1G34430.1 | 27.824 | 478 | 272 | 11 | 188 | 624 | 18 | 463 | 1.56e-37 | 145 |
Msa1396100 | AT1G34430.1 | 45.000 | 80 | 43 | 1 | 80 | 159 | 44 | 122 | 2.31e-13 | 73.2 |
Msa1396100 | AT3G06850.1 | 29.574 | 399 | 249 | 10 | 218 | 610 | 92 | 464 | 7.14e-36 | 141 |
Msa1396100 | AT3G06850.2 | 29.574 | 399 | 249 | 10 | 218 | 610 | 92 | 464 | 7.14e-36 | 141 |
Msa1396100 | AT4G26910.2 | 27.400 | 427 | 243 | 11 | 206 | 626 | 96 | 461 | 1.02e-32 | 132 |
Msa1396100 | AT4G26910.1 | 27.400 | 427 | 243 | 11 | 206 | 626 | 97 | 462 | 1.15e-32 | 131 |
Msa1396100 | AT4G26910.3 | 27.553 | 421 | 238 | 11 | 212 | 626 | 4 | 363 | 3.09e-32 | 128 |
Msa1396100 | AT5G55070.1 | 33.476 | 233 | 140 | 5 | 400 | 626 | 239 | 462 | 6.64e-29 | 120 |
Msa1396100 | AT5G55070.2 | 33.476 | 233 | 140 | 5 | 400 | 626 | 239 | 462 | 6.64e-29 | 120 |
Find 159 sgRNAs with CRISPR-Local
Find 774 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTGCAAAGTTGCTAATTT+TGG | 0.117845 | tig0022001:+21817 | Msa1396100:CDS |
AATAATCATTCATCATTATT+TGG | 0.154690 | tig0022001:-15726 | None:intergenic |
GGATGACTCCTGCAGATTTC+TGG | 0.160996 | tig0022001:+19778 | Msa1396100:intron |
ATACTAACCCTTGACTTTAA+AGG | 0.161108 | tig0022001:-17364 | None:intergenic |
GCATCTTGGTCTGGGCTTAC+TGG | 0.175983 | tig0022001:+17328 | Msa1396100:CDS |
CTTCCACCTCACATTGTTCT+TGG | 0.184031 | tig0022001:+20540 | Msa1396100:CDS |
TCCCTTAGAAAGGATCTTAA+AGG | 0.228041 | tig0022001:+22694 | Msa1396100:CDS |
TACCTTTAAGATCCTTTCTA+AGG | 0.259995 | tig0022001:-22696 | None:intergenic |
ATCAGGCCTGCATCTTGGTC+TGG | 0.260034 | tig0022001:+17319 | Msa1396100:intron |
GTTAAATTCTTCTCGTCTTC+AGG | 0.260453 | tig0022001:+17465 | Msa1396100:CDS |
AACTGTTTACCATTCGCTTC+TGG | 0.264341 | tig0022001:-22889 | None:intergenic |
GTTGGGTGGTCTTCTCCTTT+TGG | 0.268629 | tig0022001:-21739 | None:intergenic |
AACCCGATGAAGATATAAAA+TGG | 0.275956 | tig0022001:-26798 | None:intergenic |
GGTGATTGCCAAGAGGTTAT+TGG | 0.280081 | tig0022001:+22519 | Msa1396100:intron |
ATGGAATAAATCCTTGAATT+AGG | 0.280787 | tig0022001:-17042 | None:intergenic |
CAGATTTCTGGCTAAGATAT+TGG | 0.285734 | tig0022001:+19790 | Msa1396100:intron |
AAAGTAGTTGAAGCAGTAAT+TGG | 0.307860 | tig0022001:+25948 | Msa1396100:CDS |
ACACTTACTGTTATTGCAAT+AGG | 0.308240 | tig0022001:-21455 | None:intergenic |
GTTCTTTCTGCAATTAAATC+AGG | 0.315243 | tig0022001:+21905 | Msa1396100:CDS |
ACCTTGCGAATTTGACTATT+CGG | 0.317916 | tig0022001:-22049 | None:intergenic |
ACCAAGGAAACATTGCTAAA+TGG | 0.325751 | tig0022001:+20673 | Msa1396100:CDS |
GTGTGTATTTGCTCAAGATA+TGG | 0.326808 | tig0022001:-26850 | None:intergenic |
TCAATCGTAGAAGTTGTTTC+TGG | 0.331243 | tig0022001:-20507 | None:intergenic |
TGTTGGTAATTGTGTTCATT+AGG | 0.340456 | tig0022001:+26934 | Msa1396100:three_prime_UTR |
TCGTTGGTAATGGGAATCTA+AGG | 0.350230 | tig0022001:+17064 | Msa1396100:CDS |
CGCGTCTTTGATGGCAAAGT+TGG | 0.351739 | tig0022001:+26113 | Msa1396100:CDS |
GCCGATCAACGCGTCTTTGA+TGG | 0.353491 | tig0022001:+26104 | Msa1396100:CDS |
CTTCAAGACTTTCAAATTCA+AGG | 0.354404 | tig0022001:-20912 | None:intergenic |
TCAGGCCTGCATCTTGGTCT+GGG | 0.357398 | tig0022001:+17320 | Msa1396100:intron |
GTTGTTGAAATCTCAATTGT+TGG | 0.369846 | tig0022001:-26898 | None:intergenic |
TTCTCCAAGCTCACCATTGT+AGG | 0.374090 | tig0022001:-17677 | None:intergenic |
TTTATTCCATCGTTGGTAAT+GGG | 0.378169 | tig0022001:+17055 | Msa1396100:CDS |
CCCAAGGTAATATTGCAAAA+TGG | 0.384478 | tig0022001:+17781 | Msa1396100:CDS |
TCCATTTAGCAATGTTTCCT+TGG | 0.387351 | tig0022001:-20674 | None:intergenic |
ATTTATTCCATCGTTGGTAA+TGG | 0.390925 | tig0022001:+17054 | Msa1396100:CDS |
AAAATGGTCTCACCATTGTT+GGG | 0.393454 | tig0022001:-20578 | None:intergenic |
CAATGTTAAGTTCAACTTAG+TGG | 0.394633 | tig0022001:-26078 | None:intergenic |
TCCTCTTCTTTCCCTTAGAA+AGG | 0.394886 | tig0022001:+22684 | Msa1396100:CDS |
ATTGCAATCGGTTGTCCAAC+TGG | 0.402399 | tig0022001:-19836 | None:intergenic |
CCTTGCAGCATTTCAAACTT+AGG | 0.408249 | tig0022001:+24573 | Msa1396100:intron |
TAAAATGGTCTCACCATTGT+TGG | 0.411184 | tig0022001:-20579 | None:intergenic |
CAAAATGTTCCTGCTTCTGT+GGG | 0.414581 | tig0022001:+20420 | Msa1396100:CDS |
TCTCCTCAACTGCGGCATCC+TGG | 0.423635 | tig0022001:-20479 | None:intergenic |
TGTTTATCAGGCCTGCATCT+TGG | 0.430921 | tig0022001:+17314 | Msa1396100:intron |
CTTACACTATGGCAGCATAC+TGG | 0.434085 | tig0022001:+24023 | Msa1396100:intron |
CCACACTTATATTTATCATC+AGG | 0.436004 | tig0022001:+22559 | Msa1396100:CDS |
GTTGGAAGCCTAATGTTAGA+TGG | 0.437676 | tig0022001:-26880 | None:intergenic |
TGACTTACTGTTATTGCAAT+CGG | 0.439322 | tig0022001:-19848 | None:intergenic |
AAAATTAGCAACTTTGCAGC+TGG | 0.442890 | tig0022001:-21815 | None:intergenic |
CCAAGGTACCATCTAACATT+AGG | 0.443212 | tig0022001:+26872 | Msa1396100:three_prime_UTR |
TCAAAATGTTCCTGCTTCTG+TGG | 0.447831 | tig0022001:+20419 | Msa1396100:CDS |
GGCACAGAACTCCTAATTCA+AGG | 0.453842 | tig0022001:+17031 | Msa1396100:intron |
TTCTCTTTGTTTCAGACCCA+AGG | 0.460450 | tig0022001:+17765 | Msa1396100:intron |
GCATCAACATTGAATGCAAC+TGG | 0.462945 | tig0022001:+21854 | Msa1396100:CDS |
ACCTGCTTCATCTAAAGAAA+AGG | 0.464759 | tig0022001:+21943 | Msa1396100:CDS |
TTTATTCATCAAAATAATGC+TGG | 0.466725 | tig0022001:-27020 | None:intergenic |
CAGGCTTGCATTCTTGCCGT+AGG | 0.467201 | tig0022001:+25915 | Msa1396100:intron |
TTTAGATTCCAATAACCTCT+TGG | 0.470034 | tig0022001:-22527 | None:intergenic |
GAGTACTACGTACCTCGAAA+TGG | 0.470118 | tig0022001:-15927 | None:intergenic |
TGCAACTCCAAGCCAGGTTG+TGG | 0.478901 | tig0022001:-26757 | None:intergenic |
CTTCCACCAGATCCATTTCG+AGG | 0.479665 | tig0022001:+15915 | Msa1396100:CDS |
AAAGAAGAGAAGAGAAAAGA+GGG | 0.479742 | tig0022001:-15782 | None:intergenic |
TGCATTCTTGCCGTAGGGAG+AGG | 0.482989 | tig0022001:+25921 | Msa1396100:CDS |
TACTTTGTTGCCTCTCCCTA+CGG | 0.485239 | tig0022001:-25931 | None:intergenic |
GAATTTGAAAGTCTTGAAGA+AGG | 0.486562 | tig0022001:+18017 | Msa1396100:CDS |
AAAAGAAGAGAAGAGAAAAG+AGG | 0.488082 | tig0022001:-15783 | None:intergenic |
ACTGCGGCATCCTGGTGTGC+TGG | 0.491742 | tig0022001:-20471 | None:intergenic |
TCAAGGATTTATTCCATCGT+TGG | 0.495437 | tig0022001:+17048 | Msa1396100:CDS |
GTCTTTGATGGCAAAGTTGG+AGG | 0.495728 | tig0022001:+26116 | Msa1396100:CDS |
AAATGTTCCTGCTTCTGTGG+GGG | 0.496201 | tig0022001:+20422 | Msa1396100:CDS |
TAAAATTACCTCTGAGGAGA+TGG | 0.500540 | tig0022001:-24276 | None:intergenic |
ATGTTATGCAACTCCAAGCC+AGG | 0.505955 | tig0022001:-26763 | None:intergenic |
TTCAAGACTTTCAAATTCAA+GGG | 0.507491 | tig0022001:-20911 | None:intergenic |
CAGCAGCTCAGTAAACCAAA+AGG | 0.507674 | tig0022001:+21724 | Msa1396100:CDS |
TTTAATCTTACAGATAGCAG+TGG | 0.509003 | tig0022001:+17953 | Msa1396100:intron |
TACGTACCTCGAAATGGATC+TGG | 0.510505 | tig0022001:-15921 | None:intergenic |
TAACAGACCTTTAAAGTCAA+GGG | 0.511167 | tig0022001:+17357 | Msa1396100:CDS |
CATGTTGATGAACCACAACC+TGG | 0.511346 | tig0022001:+26745 | Msa1396100:three_prime_UTR |
TAGGGGATGTAGCACATGAA+TGG | 0.511399 | tig0022001:-27047 | None:intergenic |
TTGAAGCCGCAAGAATTTCA+AGG | 0.513994 | tig0022001:+24436 | Msa1396100:CDS |
GTAACAGACCTTTAAAGTCA+AGG | 0.515150 | tig0022001:+17356 | Msa1396100:CDS |
GGCACATCCTTTGAACCATC+AGG | 0.517874 | tig0022001:-19815 | None:intergenic |
ACCATTGTTGGGGACAAAGC+AGG | 0.523413 | tig0022001:-20567 | None:intergenic |
ACCTTTAAGATCCTTTCTAA+GGG | 0.528321 | tig0022001:-22695 | None:intergenic |
GCCATCAAAGACGCGTTGAT+CGG | 0.530834 | tig0022001:-26105 | None:intergenic |
TGATGAACCACAACCTGGCT+TGG | 0.531969 | tig0022001:+26750 | Msa1396100:three_prime_UTR |
GCATACTGGAATGATGAGAA+AGG | 0.537633 | tig0022001:+24037 | Msa1396100:intron |
TGGTGGAAGAAGAGAGGATA+CGG | 0.540241 | tig0022001:-15901 | None:intergenic |
CATACTGGAATGATGAGAAA+GGG | 0.541352 | tig0022001:+24038 | Msa1396100:CDS |
GAACACAATTACCAACATGC+TGG | 0.541634 | tig0022001:-26928 | None:intergenic |
TGTGTATTTGCTCAAGATAT+GGG | 0.541789 | tig0022001:-26849 | None:intergenic |
TTGTAAAATAATATATTGGG+TGG | 0.547573 | tig0022001:+26821 | Msa1396100:three_prime_UTR |
AATGTTCCTGCTTCTGTGGG+GGG | 0.547914 | tig0022001:+20423 | Msa1396100:CDS |
AATTTGAAAGTCTTGAAGAA+GGG | 0.551670 | tig0022001:+18018 | Msa1396100:CDS |
AGAGAAGAAACCAGCACACC+AGG | 0.551965 | tig0022001:+20461 | Msa1396100:CDS |
AAAGAACATCACCTTTCAGT+AGG | 0.552826 | tig0022001:-21889 | None:intergenic |
TGGATCTGGTGGAAGAAGAG+AGG | 0.553812 | tig0022001:-15907 | None:intergenic |
GGTTCAAAAGAAGTGGCAGT+TGG | 0.561363 | tig0022001:+21428 | Msa1396100:CDS |
CTGGTGCAACTATCTTAGCT+AGG | 0.563129 | tig0022001:-21403 | None:intergenic |
AGGCTTGCATTCTTGCCGTA+GGG | 0.563888 | tig0022001:+25916 | Msa1396100:intron |
GTAAGCCCAGACCAAGATGC+AGG | 0.564967 | tig0022001:-17325 | None:intergenic |
GAATTTGAAAGTCTTGAAGA+GGG | 0.566919 | tig0022001:+20916 | Msa1396100:CDS |
TGAATTTGAAAGTCTTGAAG+AGG | 0.567797 | tig0022001:+20915 | Msa1396100:CDS |
ATTGGTACCTGATGGTTCAA+AGG | 0.568103 | tig0022001:+19808 | Msa1396100:CDS |
ACACCAGGATGCCGCAGTTG+AGG | 0.568699 | tig0022001:+20476 | Msa1396100:CDS |
CCTAATGTTAGATGGTACCT+TGG | 0.570356 | tig0022001:-26872 | None:intergenic |
TGAAGCCGCAAGAATTTCAA+GGG | 0.570440 | tig0022001:+24437 | Msa1396100:CDS |
TTCAACTTAGTGGCAACAGA+TGG | 0.572073 | tig0022001:-26068 | None:intergenic |
GGATGGAATGAGAGATGAGA+GGG | 0.572189 | tig0022001:-15880 | None:intergenic |
AAAATGTTCCTGCTTCTGTG+GGG | 0.574527 | tig0022001:+20421 | Msa1396100:CDS |
GAGATAAAGCTGGCATCCCA+AGG | 0.576893 | tig0022001:-17655 | None:intergenic |
ACGAAATTATTAAACATCAA+AGG | 0.577529 | tig0022001:-26967 | None:intergenic |
GGAAGAAGAGAGGATACGGA+TGG | 0.582669 | tig0022001:-15897 | None:intergenic |
AATCAAAATCGCAAGTGTGT+TGG | 0.582953 | tig0022001:-15827 | None:intergenic |
ACCAGAAGGTTCAAAAGAAG+TGG | 0.586438 | tig0022001:+21421 | Msa1396100:CDS |
GTACCTCGAAATGGATCTGG+TGG | 0.589112 | tig0022001:-15918 | None:intergenic |
ATTATCTAATAGATTGAAGT+GGG | 0.589807 | tig0022001:+20853 | Msa1396100:intron |
GCCAGCTTTATCTCCTACAA+TGG | 0.590978 | tig0022001:+17664 | Msa1396100:CDS |
TAGATTCCCATTACCAACGA+TGG | 0.592829 | tig0022001:-17061 | None:intergenic |
GCTAAGATATTGGTACCTGA+TGG | 0.592832 | tig0022001:+19800 | Msa1396100:CDS |
CAACTGAGATTCCAGCATGT+TGG | 0.594637 | tig0022001:+26917 | Msa1396100:three_prime_UTR |
AAATGGTCTCACCATTGTTG+GGG | 0.597826 | tig0022001:-20577 | None:intergenic |
GAAGCAGTAATTGGAGCTGA+TGG | 0.599965 | tig0022001:+25957 | Msa1396100:CDS |
AATTATCTAATAGATTGAAG+TGG | 0.600966 | tig0022001:+20852 | Msa1396100:intron |
TTGAATGCAACTGGTCCTCA+CGG | 0.601871 | tig0022001:+21863 | Msa1396100:CDS |
AAGAACATCACCTTTCAGTA+GGG | 0.605863 | tig0022001:-21888 | None:intergenic |
CGGATGGAATGAGAGATGAG+AGG | 0.606341 | tig0022001:-15881 | None:intergenic |
GGCATCCCAAGGACTTCATG+TGG | 0.606738 | tig0022001:-17644 | None:intergenic |
TCCGAATAGTCAAATTCGCA+AGG | 0.610832 | tig0022001:+22048 | Msa1396100:CDS |
CTAGCTGCAAAAGCTCGTGA+AGG | 0.612789 | tig0022001:+24409 | Msa1396100:CDS |
AACTGCTATTGATATGTCAA+CGG | 0.613311 | tig0022001:-24080 | None:intergenic |
AATAGCAGTTGCCACAGAGA+AGG | 0.613496 | tig0022001:+24093 | Msa1396100:CDS |
GCTAAGATAGTTGCACCAGA+AGG | 0.613963 | tig0022001:+21407 | Msa1396100:CDS |
GAGAGATGAGAGGGTGACGA+AGG | 0.614718 | tig0022001:-15871 | None:intergenic |
AAGGTAATATTGCAAAATGG+AGG | 0.615748 | tig0022001:+17784 | Msa1396100:CDS |
TTAATCTTACAGATAGCAGT+GGG | 0.617105 | tig0022001:+17954 | Msa1396100:intron |
ACCATTGTAGGAGATAAAGC+TGG | 0.617916 | tig0022001:-17665 | None:intergenic |
CCTCACGGCACCCTACTGAA+AGG | 0.619375 | tig0022001:+21878 | Msa1396100:CDS |
CCTGATGATAAATATAAGTG+TGG | 0.619611 | tig0022001:-22559 | None:intergenic |
TAGCTGCAAAAGCTCGTGAA+GGG | 0.628747 | tig0022001:+24410 | Msa1396100:CDS |
AATTTGAAAGTCTTGAAGAG+GGG | 0.634547 | tig0022001:+20917 | Msa1396100:CDS |
ATAGCACAGAATTTATCCAC+AGG | 0.635053 | tig0022001:-24603 | None:intergenic |
AAACTTAGGAATGTATCCTG+TGG | 0.636069 | tig0022001:+24587 | Msa1396100:CDS |
GCCTGCTTTGTCCCCAACAA+TGG | 0.637348 | tig0022001:+20566 | Msa1396100:CDS |
GGCATTCCAAGAACAATGTG+AGG | 0.645606 | tig0022001:-20546 | None:intergenic |
ATACTGGAATGATGAGAAAG+GGG | 0.650066 | tig0022001:+24039 | Msa1396100:CDS |
GGTTCAAAGGATGTGCCAGT+TGG | 0.650593 | tig0022001:+19821 | Msa1396100:CDS |
GAATGTGTCAGATGTTACAC+TGG | 0.651891 | tig0022001:+22660 | Msa1396100:intron |
AAGCACAATAATCAAACACC+AGG | 0.652548 | tig0022001:-26710 | None:intergenic |
TCCTTTCTAAGGGAAAGAAG+AGG | 0.654298 | tig0022001:-22685 | None:intergenic |
ATGACATAAAATTACCTCTG+AGG | 0.663836 | tig0022001:-24282 | None:intergenic |
AATATCTGCCATCTCCTCAG+AGG | 0.672604 | tig0022001:+24268 | Msa1396100:CDS |
ATTCCAAGAACAATGTGAGG+TGG | 0.680621 | tig0022001:-20543 | None:intergenic |
AGCCGCAAGAATTTCAAGGG+GGG | 0.690006 | tig0022001:+24440 | Msa1396100:CDS |
GAAGCCGCAAGAATTTCAAG+GGG | 0.691289 | tig0022001:+24438 | Msa1396100:CDS |
TCTTGAGCAAATACACACCA+AGG | 0.697818 | tig0022001:+26855 | Msa1396100:three_prime_UTR |
ACCATCAATTACCTTCTCTG+TGG | 0.706378 | tig0022001:-24104 | None:intergenic |
CCTTTCAGTAGGGTGCCGTG+AGG | 0.734484 | tig0022001:-21878 | None:intergenic |
AAGCCGCAAGAATTTCAAGG+GGG | 0.739644 | tig0022001:+24439 | Msa1396100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTAATATAAATTTTTAT+TGG | + | tig0022001:22638-22657 | Msa1396100:intron | 0.0% |
!!! | TTAATTTATTTTTAGCTTAT+AGG | + | tig0022001:19219-19238 | Msa1396100:intron | 10.0% |
!!! | TTAACACAATTTTATTAAAT+TGG | - | tig0022001:20163-20182 | None:intergenic | 10.0% |
!!! | AAAAATTGAAAATCATTTTA+TGG | - | tig0022001:20642-20661 | None:intergenic | 10.0% |
!!! | TTTTCAAAAATACATTAAAA+AGG | - | tig0022001:20759-20778 | None:intergenic | 10.0% |
!! | TAAATTAACCAATAAATTTA+CGG | - | tig0022001:21583-21602 | None:intergenic | 10.0% |
!!! | TTCAGTTTTAAATATAAATA+AGG | + | tig0022001:22086-22105 | Msa1396100:intron | 10.0% |
!!! | GTTTTGTAAAATAATATATT+GGG | + | tig0022001:26818-26837 | Msa1396100:three_prime_UTR | 10.0% |
!!! | ATAAATGGATTAATCAAAAT+TGG | - | tig0022001:16552-16571 | None:intergenic | 15.0% |
!! | TGATATATTATCTGTATAAA+TGG | - | tig0022001:16567-16586 | None:intergenic | 15.0% |
!! | AGCAATTAATAAGTAAAAAT+TGG | - | tig0022001:16873-16892 | None:intergenic | 15.0% |
!! | AACTCAAGTTTATAAATTAA+AGG | - | tig0022001:18076-18095 | None:intergenic | 15.0% |
!! | TTTAATTGTATGCTAAAATT+TGG | - | tig0022001:19742-19761 | None:intergenic | 15.0% |
!!! | TTGAAAATTTTAAAATGTGA+AGG | + | tig0022001:20772-20791 | Msa1396100:intron | 15.0% |
!!! | TGTTATTAAACAACATTTTT+AGG | + | tig0022001:21022-21041 | Msa1396100:intron | 15.0% |
!! | TTATAATTAGCAATATCAAA+AGG | - | tig0022001:21232-21251 | None:intergenic | 15.0% |
!!! | ATTTAAAACTGAATATTTGA+GGG | - | tig0022001:22079-22098 | None:intergenic | 15.0% |
!!! | TATTTAAAACTGAATATTTG+AGG | - | tig0022001:22080-22099 | None:intergenic | 15.0% |
!! | ATAGCTATAAATTTATATGT+CGG | - | tig0022001:23007-23026 | None:intergenic | 15.0% |
!!! | ATTGAGTATTTTGTAAAATT+TGG | - | tig0022001:24191-24210 | None:intergenic | 15.0% |
!!! | TTGAAATTTTAATACTTTAG+TGG | + | tig0022001:24369-24388 | Msa1396100:intron | 15.0% |
!!! | AAAATATAATTGATTCTTGT+GGG | + | tig0022001:24956-24975 | Msa1396100:intron | 15.0% |
!!! | TGTGAATTTTAAATAGAAAA+AGG | + | tig0022001:25186-25205 | Msa1396100:intron | 15.0% |
!! | CTATTAAAGAAAATCAAATT+AGG | - | tig0022001:25611-25630 | None:intergenic | 15.0% |
!!! | ATTTTCTTTAATAGAAAGAA+AGG | + | tig0022001:25617-25636 | Msa1396100:intron | 15.0% |
!!! | ATATTTTCAAAGATTTGTAT+AGG | - | tig0022001:26425-26444 | None:intergenic | 15.0% |
!! | TTGTAATTAAAAGTGAAAAT+CGG | + | tig0022001:26472-26491 | Msa1396100:intron | 15.0% |
!!! | GGTTTTGTAAAATAATATAT+TGG | + | tig0022001:26817-26836 | Msa1396100:three_prime_UTR | 15.0% |
!!! | ATGTTTTTCATGTTCAATTA+GGG | + | tig0022001:16093-16112 | Msa1396100:intron | 20.0% |
!!! | AACGATTTTTTAATCAAACA+AGG | - | tig0022001:16289-16308 | None:intergenic | 20.0% |
!!! | AAATCGTTGCATTTTATATT+TGG | + | tig0022001:16301-16320 | Msa1396100:intron | 20.0% |
!!! | AATCGTTGCATTTTATATTT+GGG | + | tig0022001:16302-16321 | Msa1396100:intron | 20.0% |
!! | ATTTCTTATGTGAAATTTAG+AGG | + | tig0022001:16331-16350 | Msa1396100:intron | 20.0% |
!! | ACAGATAATATATCATACAT+AGG | + | tig0022001:16572-16591 | Msa1396100:intron | 20.0% |
!! | CAGATAATATATCATACATA+GGG | + | tig0022001:16573-16592 | Msa1396100:intron | 20.0% |
!!! | TTTCTTTACTTTTGAAAGAA+TGG | + | tig0022001:16892-16911 | Msa1396100:intron | 20.0% |
!! | TATTTATTGTAATTCTGCTT+TGG | + | tig0022001:16942-16961 | Msa1396100:intron | 20.0% |
!! | GTTATCTTATTATGTCTATT+AGG | + | tig0022001:17144-17163 | Msa1396100:intron | 20.0% |
!! | ATTATGTCTATTAGGATAAA+AGG | + | tig0022001:17152-17171 | Msa1396100:intron | 20.0% |
!!! | AAGTAGAAGCTTTTAAAATT+AGG | - | tig0022001:17509-17528 | None:intergenic | 20.0% |
!!! | TGTTTAGGATTTTTGTTTTA+TGG | + | tig0022001:17528-17547 | Msa1396100:intron | 20.0% |
!! | ATGTGGAAAATCTATTAAAT+GGG | - | tig0022001:17630-17649 | None:intergenic | 20.0% |
!!! | ACCATAAAGTAAATTTTTTG+GGG | - | tig0022001:18584-18603 | None:intergenic | 20.0% |
!!! | CACCATAAAGTAAATTTTTT+GGG | - | tig0022001:18585-18604 | None:intergenic | 20.0% |
!!! | ACACCATAAAGTAAATTTTT+TGG | - | tig0022001:18586-18605 | None:intergenic | 20.0% |
!!! | TTATTTTCTTATGCCTATTT+GGG | + | tig0022001:19620-19639 | Msa1396100:intron | 20.0% |
!! | AATCAGTTCAATTATAGTAA+GGG | - | tig0022001:19661-19680 | None:intergenic | 20.0% |
!! | AAATCAGTTCAATTATAGTA+AGG | - | tig0022001:19662-19681 | None:intergenic | 20.0% |
!! | TTTATATGATTTACACTCTA+GGG | - | tig0022001:19715-19734 | None:intergenic | 20.0% |
!!! | TTTTATATGATTTACACTCT+AGG | - | tig0022001:19716-19735 | None:intergenic | 20.0% |
!!! | ACATTATTAATTTTCTGTCT+AGG | - | tig0022001:19980-19999 | None:intergenic | 20.0% |
!!! | ATAAATTGCAAAGTTTTCAT+TGG | - | tig0022001:20103-20122 | None:intergenic | 20.0% |
!! | GATAATTAGATGTTAATTCA+TGG | - | tig0022001:20839-20858 | None:intergenic | 20.0% |
!! | AATTATCTAATAGATTGAAG+TGG | + | tig0022001:20852-20871 | Msa1396100:intron | 20.0% |
!! | ATTATCTAATAGATTGAAGT+GGG | + | tig0022001:20853-20872 | Msa1396100:intron | 20.0% |
!! | TTTCTTTCATACTTTATTGA+AGG | - | tig0022001:21184-21203 | None:intergenic | 20.0% |
!!! | ATGTACGAAAAGTATTAAAA+AGG | + | tig0022001:22170-22189 | Msa1396100:intron | 20.0% |
!!! | TGTACGAAAAGTATTAAAAA+GGG | + | tig0022001:22171-22190 | Msa1396100:intron | 20.0% |
!! | ATACAATTAGGATCAATATT+AGG | - | tig0022001:22277-22296 | None:intergenic | 20.0% |
!!! | GTAATGTTTTTGTTCTATTA+TGG | + | tig0022001:22375-22394 | Msa1396100:intron | 20.0% |
!!! | ATCAATTTTCCTAAGTATTT+AGG | - | tig0022001:22433-22452 | None:intergenic | 20.0% |
!!! | TTAGGAAAATTGATAGTTAA+TGG | + | tig0022001:22439-22458 | Msa1396100:intron | 20.0% |
!!! | AATATTTTTGACTGTTTTGT+AGG | + | tig0022001:22498-22517 | Msa1396100:intron | 20.0% |
!!! | GACTGATATTAATTTTTCAT+TGG | + | tig0022001:22720-22739 | Msa1396100:intron | 20.0% |
!! | AATCCAATATAATCTTGATT+TGG | + | tig0022001:22782-22801 | Msa1396100:intron | 20.0% |
!! | CAAATGGATAGAAAAATAAT+AGG | - | tig0022001:22916-22935 | None:intergenic | 20.0% |
!! | GTATTTACCTTAATTATCTT+AGG | + | tig0022001:22940-22959 | Msa1396100:intron | 20.0% |
!!! | TGTATATTTTTGAAGCTTAA+CGG | + | tig0022001:23424-23443 | Msa1396100:intron | 20.0% |
!! | AAAAATATGTGATTTCAACA+TGG | - | tig0022001:23546-23565 | None:intergenic | 20.0% |
!! | AAGATATAATACATAAGCAT+TGG | + | tig0022001:23652-23671 | Msa1396100:intron | 20.0% |
!! | GTACGATTAATAAAATAACT+AGG | + | tig0022001:23922-23941 | Msa1396100:intron | 20.0% |
!!! | TGATCCACATTTTTTAATAT+TGG | - | tig0022001:24242-24261 | None:intergenic | 20.0% |
!!! | TAATTTTATGTCATTGACAT+AGG | + | tig0022001:24291-24310 | Msa1396100:intron | 20.0% |
!!! | TTCCTATTTAATGTTTTTTC+AGG | + | tig0022001:24314-24333 | Msa1396100:intron | 20.0% |
!! | TTCCTGAAAAAACATTAAAT+AGG | - | tig0022001:24319-24338 | None:intergenic | 20.0% |
!! | AATTAGATGTTGTAAATACT+GGG | - | tig0022001:24737-24756 | None:intergenic | 20.0% |
!! | TAATTAGATGTTGTAAATAC+TGG | - | tig0022001:24738-24757 | None:intergenic | 20.0% |
!! | ATTTACAACATCTAATTAAC+TGG | + | tig0022001:24740-24759 | Msa1396100:intron | 20.0% |
!!! | TTAAGTTTTTACCTTGTATT+AGG | + | tig0022001:24785-24804 | Msa1396100:intron | 20.0% |
!!! | TAAGTTTTTACCTTGTATTA+GGG | + | tig0022001:24786-24805 | Msa1396100:intron | 20.0% |
!!! | GAAAATATAATTGATTCTTG+TGG | + | tig0022001:24955-24974 | Msa1396100:intron | 20.0% |
!!! | AAATATAATTGATTCTTGTG+GGG | + | tig0022001:24957-24976 | Msa1396100:intron | 20.0% |
!! | ATATTCATTAATCTACTTGT+GGG | - | tig0022001:25354-25373 | None:intergenic | 20.0% |
!! | TATATTCATTAATCTACTTG+TGG | - | tig0022001:25355-25374 | None:intergenic | 20.0% |
!! | AAAAGTGAATGAAAAAACAT+TGG | - | tig0022001:25488-25507 | None:intergenic | 20.0% |
!! | GTAATTGGAATACTTTAATT+AGG | + | tig0022001:26144-26163 | Msa1396100:intron | 20.0% |
!! | GAATACTTTAATTAGGTAAT+AGG | + | tig0022001:26151-26170 | Msa1396100:intron | 20.0% |
!!! | ATTATTTCTGGGATTAATAT+TGG | + | tig0022001:26273-26292 | Msa1396100:intron | 20.0% |
!!! | TTATTTCTGGGATTAATATT+GGG | + | tig0022001:26274-26293 | Msa1396100:intron | 20.0% |
!!! | TGTTTTCAAAGATTTGTATA+GGG | + | tig0022001:26361-26380 | Msa1396100:intron | 20.0% |
!!! | TCAATATGTCGATTATTAAT+GGG | - | tig0022001:26538-26557 | None:intergenic | 20.0% |
!!! | TTCAATATGTCGATTATTAA+TGG | - | tig0022001:26539-26558 | None:intergenic | 20.0% |
!! | TTGTAAAATAATATATTGGG+TGG | + | tig0022001:26821-26840 | Msa1396100:three_prime_UTR | 20.0% |
!! | ACGAAATTATTAAACATCAA+AGG | - | tig0022001:26970-26989 | None:intergenic | 20.0% |
!! | TTTATTCATCAAAATAATGC+TGG | - | tig0022001:27023-27042 | None:intergenic | 20.0% |
!!! | TATCCGATTTTCTTTAACTT+TGG | + | tig0022001:16011-16030 | Msa1396100:intron | 25.0% |
! | TTTGGTCGAAATTACTTAAT+GGG | + | tig0022001:16029-16048 | Msa1396100:intron | 25.0% |
!!! | TTTTTAGCTTATGGATTAGT+TGG | + | tig0022001:16060-16079 | Msa1396100:intron | 25.0% |
!! | CATGTTTTTCATGTTCAATT+AGG | + | tig0022001:16092-16111 | Msa1396100:intron | 25.0% |
!! | TGTTTTTCATGTTCAATTAG+GGG | + | tig0022001:16094-16113 | Msa1396100:intron | 25.0% |
! | TTATGTGAAATTTAGAGGAT+TGG | + | tig0022001:16336-16355 | Msa1396100:intron | 25.0% |
! | ATTTATTTGAGCATATCTAC+TGG | + | tig0022001:16609-16628 | Msa1396100:intron | 25.0% |
!!! | TTTACTTTTGAAAGAATGGT+AGG | + | tig0022001:16896-16915 | Msa1396100:intron | 25.0% |
! | ATGGAATAAATCCTTGAATT+AGG | - | tig0022001:17045-17064 | None:intergenic | 25.0% |
!! | TGAGAAAAAATACTGGTTAA+TGG | - | tig0022001:17097-17116 | None:intergenic | 25.0% |
! | AATTAGATCATACAAAGTTG+AGG | - | tig0022001:17275-17294 | None:intergenic | 25.0% |
!!! | AGCTTTTAAAATTAGGTAAC+AGG | - | tig0022001:17502-17521 | None:intergenic | 25.0% |
! | TTAAAAGCTTCTACTTGTTT+AGG | + | tig0022001:17513-17532 | Msa1396100:intron | 25.0% |
!! | TTCTCTTTTATGATTAACAG+AGG | + | tig0022001:17552-17571 | Msa1396100:intron | 25.0% |
! | TGTGGAAAATCTATTAAATG+GGG | - | tig0022001:17629-17648 | None:intergenic | 25.0% |
! | CATGTGGAAAATCTATTAAA+TGG | - | tig0022001:17631-17650 | None:intergenic | 25.0% |
! | AATGAAAAGTGATCAGAAAA+GGG | - | tig0022001:17719-17738 | None:intergenic | 25.0% |
! | AAATGAAAAGTGATCAGAAA+AGG | - | tig0022001:17720-17739 | None:intergenic | 25.0% |
!!! | TTTCTGATCACTTTTCATTT+AGG | + | tig0022001:17720-17739 | Msa1396100:intron | 25.0% |
!!! | TTCTGATCACTTTTCATTTA+GGG | + | tig0022001:17721-17740 | Msa1396100:intron | 25.0% |
! | AATTTGAAAGTCTTGAAGAA+GGG | + | tig0022001:18018-18037 | Msa1396100:CDS | 25.0% |
!!! | TTTTTTTTCTTCCTAAGTAC+TGG | + | tig0022001:18046-18065 | Msa1396100:intron | 25.0% |
! | TTTCTTACTGTTGAAGTTAA+AGG | + | tig0022001:18094-18113 | Msa1396100:intron | 25.0% |
! | AAATAGATTTCTGTCTTACT+AGG | - | tig0022001:18316-18335 | None:intergenic | 25.0% |
!!! | TAATACGTGCTTTAAGAAAA+GGG | - | tig0022001:18381-18400 | None:intergenic | 25.0% |
!!! | AGAAAATATTTTTCTAGGAG+TGG | - | tig0022001:18526-18545 | None:intergenic | 25.0% |
!! | GTAGGAGAAAATATTTTTCT+AGG | - | tig0022001:18531-18550 | None:intergenic | 25.0% |
!!! | CCATAAAGTAAATTTTTTGG+GGG | - | tig0022001:18583-18602 | None:intergenic | 25.0% |
! | GTTCTTATAACCATACTTAA+AGG | + | tig0022001:18604-18623 | Msa1396100:intron | 25.0% |
! | TCTTGTTCAACTTCAAATTT+AGG | + | tig0022001:18629-18648 | Msa1396100:intron | 25.0% |
! | ATGTAAAAAGGATACAAGAT+CGG | - | tig0022001:18662-18681 | None:intergenic | 25.0% |
!! | AATGTTAAGCTTTAATACAC+TGG | - | tig0022001:18750-18769 | None:intergenic | 25.0% |
!!! | CATTTTAGAACATCGAATAT+AGG | - | tig0022001:18893-18912 | None:intergenic | 25.0% |
! | GTTAGTATAAGTATGAACAA+AGG | - | tig0022001:19344-19363 | None:intergenic | 25.0% |
!!! | ATCAAAACTTTAAGATTACC+TGG | + | tig0022001:19416-19435 | Msa1396100:intron | 25.0% |
! | AATGAATGACTACAATTCAA+GGG | - | tig0022001:19499-19518 | None:intergenic | 25.0% |
!! | CTTCTGTACTTTATATGTTT+TGG | + | tig0022001:19537-19556 | Msa1396100:intron | 25.0% |
!!! | GTTATTTTCTTATGCCTATT+TGG | + | tig0022001:19619-19638 | Msa1396100:intron | 25.0% |
! | TTAAAATGTGTTGTAGTGAT+TGG | + | tig0022001:19757-19776 | Msa1396100:intron | 25.0% |
! | TAACAAATAGATACAAGAGT+TGG | - | tig0022001:19889-19908 | None:intergenic | 25.0% |
!! | ATCTATTTGTTACTGTTATG+TGG | + | tig0022001:19897-19916 | Msa1396100:intron | 25.0% |
! | TGGCAGATTAAAAAACATAA+AGG | - | tig0022001:20083-20102 | None:intergenic | 25.0% |
! | GCTTACATGATCAAATATTT+CGG | - | tig0022001:20357-20376 | None:intergenic | 25.0% |
! | AGTTACAAGTAGCATTAAAA+TGG | - | tig0022001:20597-20616 | None:intergenic | 25.0% |
! | TATGGAAGAAAAGTTTATGT+TGG | - | tig0022001:20624-20643 | None:intergenic | 25.0% |
! | GCTAAATGGAATAAAAAAGA+AGG | + | tig0022001:20687-20706 | Msa1396100:CDS | 25.0% |
! | GGAACACAGAATAAATAAAA+CGG | - | tig0022001:20818-20837 | None:intergenic | 25.0% |
! | TTCAAGACTTTCAAATTCAA+GGG | - | tig0022001:18015-18034 | None:intergenic | 25.0% |
! | TAAAAAACTGGTCAGTAATT+TGG | - | tig0022001:21257-21276 | None:intergenic | 25.0% |
! | ATGATGTTCCGTAAATTTAT+TGG | + | tig0022001:21572-21591 | Msa1396100:intron | 25.0% |
!!! | AAAAGCAAAGAGTATCAATT+TGG | - | tig0022001:21606-21625 | None:intergenic | 25.0% |
!!! | AAGTTGCTAATTTTGGAATA+TGG | + | tig0022001:21824-21843 | Msa1396100:CDS | 25.0% |
!! | ACTTTTCGTACATTCTTATT+TGG | - | tig0022001:22163-22182 | None:intergenic | 25.0% |
! | AAGTATTAAAAAGGGACTAA+AGG | + | tig0022001:22179-22198 | Msa1396100:intron | 25.0% |
!!! | CATATTGTTTTGGTAATACT+TGG | + | tig0022001:22323-22342 | Msa1396100:intron | 25.0% |
! | TAGTAGAGATGTAAATAGAA+AGG | - | tig0022001:22410-22429 | None:intergenic | 25.0% |
!! | TCAAAAATATTTGAGATGAG+TGG | - | tig0022001:22489-22508 | None:intergenic | 25.0% |
! | TAAGGTAAATACAACACAAA+TGG | - | tig0022001:22932-22951 | None:intergenic | 25.0% |
! | TCTAACACCTAAGATAATTA+AGG | - | tig0022001:22950-22969 | None:intergenic | 25.0% |
! | AACATTCACAGTAATGTATA+CGG | - | tig0022001:23064-23083 | None:intergenic | 25.0% |
! | CAGAATGTTTCAAACTATAT+GGG | - | tig0022001:23269-23288 | None:intergenic | 25.0% |
! | TCAGAATGTTTCAAACTATA+TGG | - | tig0022001:23270-23289 | None:intergenic | 25.0% |
! | TAACTCATCCTCAAAAAAAT+TGG | - | tig0022001:23833-23852 | None:intergenic | 25.0% |
!!! | AATTTTTTTGAGGATGAGTT+AGG | + | tig0022001:23832-23851 | Msa1396100:intron | 25.0% |
! | TTTATTAATCGTACTGCATA+AGG | - | tig0022001:23916-23935 | None:intergenic | 25.0% |
! | GACTCCAATATTAAAAAATG+TGG | + | tig0022001:24235-24254 | Msa1396100:CDS | 25.0% |
! | ACCAATTTCATTTATACACA+AGG | - | tig0022001:24766-24785 | None:intergenic | 25.0% |
!! | AAGTTTTTACCTTGTATTAG+GGG | + | tig0022001:24787-24806 | Msa1396100:intron | 25.0% |
!! | ACAATCATTAGAGAGAATTT+TGG | + | tig0022001:24917-24936 | Msa1396100:intron | 25.0% |
!! | CAATCATTAGAGAGAATTTT+GGG | + | tig0022001:24918-24937 | Msa1396100:intron | 25.0% |
! | ACTGTCCAATAATTAAGTAT+GGG | + | tig0022001:25102-25121 | Msa1396100:intron | 25.0% |
! | GTTATCATCATTGTTGTATA+GGG | + | tig0022001:25269-25288 | Msa1396100:intron | 25.0% |
! | TTATCATCATTGTTGTATAG+GGG | + | tig0022001:25270-25289 | Msa1396100:intron | 25.0% |
! | AGGCAAAATACAACAAAATT+TGG | - | tig0022001:25431-25450 | None:intergenic | 25.0% |
! | AATAGGAGTAATTTCATGAA+AGG | - | tig0022001:25704-25723 | None:intergenic | 25.0% |
! | GTTAAAGTTTAAGCATTAAG+TGG | - | tig0022001:26008-26027 | None:intergenic | 25.0% |
!!! | GACATTGATTTTTATTTGCT+AGG | + | tig0022001:26035-26054 | Msa1396100:intron | 25.0% |
! | TGTGATAATATATGCCATAT+AGG | + | tig0022001:26229-26248 | Msa1396100:intron | 25.0% |
!! | CTGTTTTCAAAGATTTGTAT+AGG | + | tig0022001:26360-26379 | Msa1396100:intron | 25.0% |
! | TATTAAGCAGAGTAAAAACA+AGG | + | tig0022001:26442-26461 | Msa1396100:intron | 25.0% |
!! | TGTCCATTTTATATCTTCAT+CGG | + | tig0022001:26795-26814 | Msa1396100:three_prime_UTR | 25.0% |
AAAGAAGAGAAGAGAAAAGA+GGG | - | tig0022001:15785-15804 | None:intergenic | 30.0% | |
AAAAGAAGAGAAGAGAAAAG+AGG | - | tig0022001:15786-15805 | None:intergenic | 30.0% | |
CGACCAAAGTTAAAGAAAAT+CGG | - | tig0022001:16017-16036 | None:intergenic | 30.0% | |
CTTTGGTCGAAATTACTTAA+TGG | + | tig0022001:16028-16047 | Msa1396100:intron | 30.0% | |
TTGGTCGAAATTACTTAATG+GGG | + | tig0022001:16030-16049 | Msa1396100:intron | 30.0% | |
!!! | GGTTTTGAGTTTTTAGCTTA+TGG | + | tig0022001:16051-16070 | Msa1396100:intron | 30.0% |
! | GTTTTTCATGTTCAATTAGG+GGG | + | tig0022001:16095-16114 | Msa1396100:intron | 30.0% |
!! | TTGTTTTGTACTCAACTAGA+TGG | + | tig0022001:16244-16263 | Msa1396100:intron | 30.0% |
! | GTTACTAGTTTAGGGTTTAA+GGG | + | tig0022001:16358-16377 | Msa1396100:intron | 30.0% |
TTAAGGGTTTATGCTTCATT+TGG | + | tig0022001:16374-16393 | Msa1396100:intron | 30.0% | |
GTTATAAGCTGTAAATAAGC+TGG | + | tig0022001:16789-16808 | Msa1396100:intron | 30.0% | |
AATAAGCTGGTTATCCAAAT+AGG | + | tig0022001:16802-16821 | Msa1396100:intron | 30.0% | |
ATAAGCTGGTTATCCAAATA+GGG | + | tig0022001:16803-16822 | Msa1396100:intron | 30.0% | |
TTATTGTAATTCTGCTTTGG+TGG | + | tig0022001:16945-16964 | Msa1396100:intron | 30.0% | |
TATTGTAATTCTGCTTTGGT+GGG | + | tig0022001:16946-16965 | Msa1396100:intron | 30.0% | |
! | ACTGTTTTCTGTTATCATCT+TGG | + | tig0022001:17010-17029 | Msa1396100:intron | 30.0% |
! | ATTTATTCCATCGTTGGTAA+TGG | + | tig0022001:17054-17073 | Msa1396100:CDS | 30.0% |
!! | TTTATTCCATCGTTGGTAAT+GGG | + | tig0022001:17055-17074 | Msa1396100:CDS | 30.0% |
AACCAATGAAAATGGCTTAT+TGG | - | tig0022001:17196-17215 | None:intergenic | 30.0% | |
TTATGCTCAACCAATGAAAA+TGG | - | tig0022001:17204-17223 | None:intergenic | 30.0% | |
TCTAATTGACAGTTTACCAT+TGG | + | tig0022001:17288-17307 | Msa1396100:intron | 30.0% | |
!! | TAACAGACCTTTAAAGTCAA+GGG | + | tig0022001:17357-17376 | Msa1396100:CDS | 30.0% |
ATACTAACCCTTGACTTTAA+AGG | - | tig0022001:17367-17386 | None:intergenic | 30.0% | |
! | ACATCAACCGTCAATATTTT+TGG | + | tig0022001:17430-17449 | Msa1396100:intron | 30.0% |
GTGGAAAATCTATTAAATGG+GGG | - | tig0022001:17628-17647 | None:intergenic | 30.0% | |
! | CCATTTTGCAATATTACCTT+GGG | - | tig0022001:17784-17803 | None:intergenic | 30.0% |
! | TCCATTTTGCAATATTACCT+TGG | - | tig0022001:17785-17804 | None:intergenic | 30.0% |
AAGGTAATATTGCAAAATGG+AGG | + | tig0022001:17784-17803 | Msa1396100:CDS | 30.0% | |
CAAAATGGAGGAAAAAAGAA+GGG | + | tig0022001:17796-17815 | Msa1396100:CDS | 30.0% | |
AAAATGGAGGAAAAAAGAAG+GGG | + | tig0022001:17797-17816 | Msa1396100:CDS | 30.0% | |
TGTAAGATTAAACAGTAGCA+AGG | - | tig0022001:17945-17964 | None:intergenic | 30.0% | |
TTTAATCTTACAGATAGCAG+TGG | + | tig0022001:17953-17972 | Msa1396100:intron | 30.0% | |
TTAATCTTACAGATAGCAGT+GGG | + | tig0022001:17954-17973 | Msa1396100:intron | 30.0% | |
GAATTTGAAAGTCTTGAAGA+AGG | + | tig0022001:18017-18036 | Msa1396100:CDS | 30.0% | |
AAACTGTATTACTCCAAAGA+TGG | - | tig0022001:18213-18232 | None:intergenic | 30.0% | |
!! | TTGGAGTAATACAGTTTTGA+TGG | + | tig0022001:18216-18235 | Msa1396100:intron | 30.0% |
!! | CTAATACGTGCTTTAAGAAA+AGG | - | tig0022001:18382-18401 | None:intergenic | 30.0% |
TTAGCTATAGCTAGATCAAA+AGG | + | tig0022001:18398-18417 | Msa1396100:intron | 30.0% | |
TTAGCTTAGGAAATATCAGT+AGG | - | tig0022001:18549-18568 | None:intergenic | 30.0% | |
CCCCCAAAAAATTTACTTTA+TGG | + | tig0022001:18580-18599 | Msa1396100:intron | 30.0% | |
AGGATATTGTGGATGTAAAA+AGG | - | tig0022001:18674-18693 | None:intergenic | 30.0% | |
CAATGTAAGATCGATAAATG+GGG | - | tig0022001:18727-18746 | None:intergenic | 30.0% | |
GCAATGTAAGATCGATAAAT+GGG | - | tig0022001:18728-18747 | None:intergenic | 30.0% | |
ATGCTTAAAAGGAAAACCTA+CGG | - | tig0022001:18869-18888 | None:intergenic | 30.0% | |
! | GAAATCTAGTTCATGAGATT+AGG | - | tig0022001:18919-18938 | None:intergenic | 30.0% |
ATGCAGTGAAAAATAAGCAA+GGG | - | tig0022001:18973-18992 | None:intergenic | 30.0% | |
AAAACTTGGTCGAATCAATA+CGG | - | tig0022001:19109-19128 | None:intergenic | 30.0% | |
TTTACAACCAACGTAAAACT+TGG | - | tig0022001:19123-19142 | None:intergenic | 30.0% | |
CAAAAAGAGAGGTTTGTATT+TGG | - | tig0022001:19148-19167 | None:intergenic | 30.0% | |
! | TACAAACCTCTCTTTTTGTT+TGG | + | tig0022001:19150-19169 | Msa1396100:intron | 30.0% |
!! | ACAAACCTCTCTTTTTGTTT+GGG | + | tig0022001:19151-19170 | Msa1396100:intron | 30.0% |
TGAGACTAAAACATTAGTGT+CGG | + | tig0022001:19385-19404 | Msa1396100:intron | 30.0% | |
CAATGAATGACTACAATTCA+AGG | - | tig0022001:19500-19519 | None:intergenic | 30.0% | |
ATATAATAGAAGGCCCAAAT+AGG | - | tig0022001:19636-19655 | None:intergenic | 30.0% | |
AGTAAGCCAGATATAATAGA+AGG | - | tig0022001:19646-19665 | None:intergenic | 30.0% | |
TGACTTACTGTTATTGCAAT+CGG | - | tig0022001:19851-19870 | None:intergenic | 30.0% | |
ATGTTTACTTCCAACATTAC+TGG | + | tig0022001:19931-19950 | Msa1396100:intron | 30.0% | |
!!! | AATAATGTCATTTTGCACAC+TGG | + | tig0022001:19992-20011 | Msa1396100:intron | 30.0% |
! | AAAAACATAAAGGTGCACAT+TGG | - | tig0022001:20073-20092 | None:intergenic | 30.0% |
! | TCTATATTTTTCCAATGAGC+TGG | - | tig0022001:20274-20293 | None:intergenic | 30.0% |
ATGATTCTAACCTACAATTC+TGG | + | tig0022001:20311-20330 | Msa1396100:intron | 30.0% | |
! | TTTGATCATGTAAGCTCTAA+CGG | + | tig0022001:20362-20381 | Msa1396100:intron | 30.0% |
!!! | TTTTTTTCTTCACAGAACCA+AGG | + | tig0022001:20657-20676 | Msa1396100:intron | 30.0% |
GAATAAAAAAGAAGGAGACA+AGG | + | tig0022001:20695-20714 | Msa1396100:CDS | 30.0% | |
CTTCAAGACTTTCAAATTCA+AGG | - | tig0022001:18016-18035 | None:intergenic | 30.0% | |
TGAATTTGAAAGTCTTGAAG+AGG | + | tig0022001:18016-18035 | Msa1396100:CDS | 30.0% | |
GAATTTGAAAGTCTTGAAGA+GGG | + | tig0022001:18017-18036 | Msa1396100:CDS | 30.0% | |
AATTTGAAAGTCTTGAAGAG+GGG | + | tig0022001:20917-20936 | Msa1396100:CDS | 30.0% | |
AACACAATATTCACAGTGAA+AGG | - | tig0022001:20968-20987 | None:intergenic | 30.0% | |
TTCACTGTGAATATTGTGTT+TGG | + | tig0022001:20968-20987 | Msa1396100:intron | 30.0% | |
! | TTATTTAAGATGAAGCTGCT+TGG | - | tig0022001:21048-21067 | None:intergenic | 30.0% |
AAGACTTGAGGCATATAATA+TGG | + | tig0022001:21085-21104 | Msa1396100:intron | 30.0% | |
AGACTTGAGGCATATAATAT+GGG | + | tig0022001:21086-21105 | Msa1396100:intron | 30.0% | |
AAACACTTCAGTAAGATATC+AGG | - | tig0022001:21134-21153 | None:intergenic | 30.0% | |
TAGCAATATCAAAAGGAAAG+AGG | - | tig0022001:21225-21244 | None:intergenic | 30.0% | |
TCAAAATGTCAGACATAAGT+TGG | - | tig0022001:21372-21391 | None:intergenic | 30.0% | |
! | AACTTATGTCTGACATTTTG+AGG | + | tig0022001:21371-21390 | Msa1396100:intron | 30.0% |
! | ACTTATGTCTGACATTTTGA+GGG | + | tig0022001:21372-21391 | Msa1396100:intron | 30.0% |
ACACTTACTGTTATTGCAAT+AGG | - | tig0022001:21458-21477 | None:intergenic | 30.0% | |
!! | TTCACTTTTAGTGTCATGTT+GGG | - | tig0022001:21759-21778 | None:intergenic | 30.0% |
!!! | GCTAATTTTGGAATATGGAT+TGG | + | tig0022001:21829-21848 | Msa1396100:CDS | 30.0% |
GTTCTTTCTGCAATTAAATC+AGG | + | tig0022001:21905-21924 | Msa1396100:CDS | 30.0% | |
ATGCTGAATTCACTATATAG+AGG | - | tig0022001:22306-22325 | None:intergenic | 30.0% | |
! | GTGAATTCAGCATATTGTTT+TGG | + | tig0022001:22313-22332 | Msa1396100:intron | 30.0% |
TCTCTACTACCTAAATACTT+AGG | + | tig0022001:22421-22440 | Msa1396100:intron | 30.0% | |
! | AAATATTTGAGATGAGTGGA+AGG | - | tig0022001:22485-22504 | None:intergenic | 30.0% |
TTTAGATTCCAATAACCTCT+TGG | - | tig0022001:22530-22549 | None:intergenic | 30.0% | |
CCTGATGATAAATATAAGTG+TGG | - | tig0022001:22562-22581 | None:intergenic | 30.0% | |
CCACACTTATATTTATCATC+AGG | + | tig0022001:22559-22578 | Msa1396100:CDS | 30.0% | |
AATAATATGCACGACATAAG+GGG | - | tig0022001:22592-22611 | None:intergenic | 30.0% | |
CAATAATATGCACGACATAA+GGG | - | tig0022001:22593-22612 | None:intergenic | 30.0% | |
!! | ACCTTTAAGATCCTTTCTAA+GGG | - | tig0022001:22698-22717 | None:intergenic | 30.0% |
!! | TACCTTTAAGATCCTTTCTA+AGG | - | tig0022001:22699-22718 | None:intergenic | 30.0% |
! | TTGGCACATTTTAGATGTTA+CGG | + | tig0022001:22739-22758 | Msa1396100:intron | 30.0% |
GGACCAAATCAAGATTATAT+TGG | - | tig0022001:22788-22807 | None:intergenic | 30.0% | |
AAACACTTCAGTCAACAATT+CGG | - | tig0022001:23088-23107 | None:intergenic | 30.0% | |
TCAAGTAGTATAAACTCATC+TGG | + | tig0022001:23149-23168 | Msa1396100:intron | 30.0% | |
! | ACTATATGGGTTAAAGTATC+AGG | - | tig0022001:23256-23275 | None:intergenic | 30.0% |
GAAGCTTAAGAGAAGAATAA+TGG | + | tig0022001:23435-23454 | Msa1396100:intron | 30.0% | |
CTTAACGGAAGAATAAGAAT+GGG | + | tig0022001:23489-23508 | Msa1396100:intron | 30.0% | |
ATAAGAATGGGATTAGGTTA+TGG | + | tig0022001:23501-23520 | Msa1396100:intron | 30.0% | |
TAAGAATGGGATTAGGTTAT+GGG | + | tig0022001:23502-23521 | Msa1396100:intron | 30.0% | |
!! | TCCTTTAAGTCAACTTTTTC+CGG | - | tig0022001:23575-23594 | None:intergenic | 30.0% |
!! | CTTAAAGGATTTGTTGCAAA+AGG | + | tig0022001:23586-23605 | Msa1396100:intron | 30.0% |
! | GCATTGGCATTTATAATTGT+TGG | + | tig0022001:23668-23687 | Msa1396100:intron | 30.0% |
!!! | CTTACAAGCCAATTTTTTTG+AGG | + | tig0022001:23822-23841 | Msa1396100:intron | 30.0% |
TACTACTGTATAGAGAACTT+AGG | - | tig0022001:23865-23884 | None:intergenic | 30.0% | |
AAGGTTATGTTAGTTATGCT+TGG | - | tig0022001:23897-23916 | None:intergenic | 30.0% | |
AGACTTCTATAGAGAAAATC+TGG | - | tig0022001:23986-24005 | None:intergenic | 30.0% | |
CTTAAATCCAACTTACACTA+TGG | + | tig0022001:24012-24031 | Msa1396100:intron | 30.0% | |
AACTGCTATTGATATGTCAA+CGG | - | tig0022001:24083-24102 | None:intergenic | 30.0% | |
! | AAATACTCAATCCTTTTGTG+TGG | + | tig0022001:24147-24166 | Msa1396100:intron | 30.0% |
ATGACATAAAATTACCTCTG+AGG | - | tig0022001:24285-24304 | None:intergenic | 30.0% | |
AATCTTGACTGTTTGTGTTT+AGG | + | tig0022001:24337-24356 | Msa1396100:intron | 30.0% | |
TAATACTTTAGTGGCACTTT+AGG | + | tig0022001:24378-24397 | Msa1396100:intron | 30.0% | |
GCATATATTTCCATGAATGT+CGG | + | tig0022001:24489-24508 | Msa1396100:intron | 30.0% | |
CATATATTTCCATGAATGTC+GGG | + | tig0022001:24490-24509 | Msa1396100:intron | 30.0% | |
GCCTTGTGTATAAATGAAAT+TGG | + | tig0022001:24762-24781 | Msa1396100:intron | 30.0% | |
CAGTAAGCTTATTTGCTTAT+TGG | - | tig0022001:24833-24852 | None:intergenic | 30.0% | |
! | CTTCTTAATGGTGCTTTATT+GGG | - | tig0022001:24994-25013 | None:intergenic | 30.0% |
! | CAATAAAGCACCATTAAGAA+GGG | + | tig0022001:24993-25012 | Msa1396100:intron | 30.0% |
GACTGTCCAATAATTAAGTA+TGG | + | tig0022001:25101-25120 | Msa1396100:intron | 30.0% | |
CTGTCCAATAATTAAGTATG+GGG | + | tig0022001:25103-25122 | Msa1396100:intron | 30.0% | |
TGTCCAATAATTAAGTATGG+GGG | + | tig0022001:25104-25123 | Msa1396100:intron | 30.0% | |
!!! | TTTGACCTACAGTTTTTTCT+CGG | - | tig0022001:25132-25151 | None:intergenic | 30.0% |
TCAAACCATTATAAGAGAGT+TGG | + | tig0022001:25147-25166 | Msa1396100:intron | 30.0% | |
GGTTATCATCATTGTTGTAT+AGG | + | tig0022001:25268-25287 | Msa1396100:intron | 30.0% | |
TCTATTTACCATTTCAACGA+AGG | + | tig0022001:25550-25569 | Msa1396100:intron | 30.0% | |
CTATTTACCATTTCAACGAA+GGG | + | tig0022001:25551-25570 | Msa1396100:intron | 30.0% | |
TATTTACCATTTCAACGAAG+GGG | + | tig0022001:25552-25571 | Msa1396100:intron | 30.0% | |
GACGATACGATTACAAAATA+GGG | - | tig0022001:25743-25762 | None:intergenic | 30.0% | |
TGACGATACGATTACAAAAT+AGG | - | tig0022001:25744-25763 | None:intergenic | 30.0% | |
!!! | CTTGAATCATTTTGAAATCC+AGG | - | tig0022001:25840-25859 | None:intergenic | 30.0% |
! | ATTTGTATATCATTTGCTGC+AGG | + | tig0022001:25896-25915 | Msa1396100:intron | 30.0% |
AAAGTAGTTGAAGCAGTAAT+TGG | + | tig0022001:25948-25967 | Msa1396100:CDS | 30.0% | |
GAGCTGATGGTATAAATTTA+TGG | + | tig0022001:25970-25989 | Msa1396100:intron | 30.0% | |
CAATGTTAAGTTCAACTTAG+TGG | - | tig0022001:26081-26100 | None:intergenic | 30.0% | |
! | TTAGGTAATAGGAAGTATGA+AGG | + | tig0022001:26162-26181 | Msa1396100:intron | 30.0% |
GATAATATATGCCATATAGG+TGG | + | tig0022001:26232-26251 | Msa1396100:intron | 30.0% | |
AAATGACCCAAAAAGAAGAT+TGG | + | tig0022001:26298-26317 | Msa1396100:intron | 30.0% | |
! | AGTGATCCAATCTTCTTTTT+GGG | - | tig0022001:26307-26326 | None:intergenic | 30.0% |
! | TAGTGATCCAATCTTCTTTT+TGG | - | tig0022001:26308-26327 | None:intergenic | 30.0% |
ATCACTACTAAAGACATGTT+TGG | + | tig0022001:26321-26340 | Msa1396100:intron | 30.0% | |
!! | ACTAAAGACATGTTTGGTTT+TGG | + | tig0022001:26327-26346 | Msa1396100:intron | 30.0% |
GAACCATTAATACTTCATTG+AGG | + | tig0022001:26494-26513 | Msa1396100:intron | 30.0% | |
! | GTCCATTTTATATCTTCATC+GGG | + | tig0022001:26796-26815 | Msa1396100:three_prime_UTR | 30.0% |
AACCCGATGAAGATATAAAA+TGG | - | tig0022001:26801-26820 | None:intergenic | 30.0% | |
TGTGTATTTGCTCAAGATAT+GGG | - | tig0022001:26852-26871 | None:intergenic | 30.0% | |
GTTGTTGAAATCTCAATTGT+TGG | - | tig0022001:26901-26920 | None:intergenic | 30.0% | |
!! | TGTTGGTAATTGTGTTCATT+AGG | + | tig0022001:26934-26953 | Msa1396100:three_prime_UTR | 30.0% |
AATCAAAATCGCAAGTGTGT+TGG | - | tig0022001:15830-15849 | None:intergenic | 35.0% | |
!!! | GCGATTTTGATTCTCTTCAA+TGG | + | tig0022001:15838-15857 | Msa1396100:exon | 35.0% |
!! | TAGCTTATGGATTAGTTGGT+TGG | + | tig0022001:16064-16083 | Msa1396100:intron | 35.0% |
!! | AGAGGATTGGTTACTAGTTT+AGG | + | tig0022001:16349-16368 | Msa1396100:intron | 35.0% |
!! | GAGGATTGGTTACTAGTTTA+GGG | + | tig0022001:16350-16369 | Msa1396100:intron | 35.0% |
! | GGTTACTAGTTTAGGGTTTA+AGG | + | tig0022001:16357-16376 | Msa1396100:intron | 35.0% |
GGATGAACATGAAACTGAAA+TGG | + | tig0022001:16395-16414 | Msa1396100:intron | 35.0% | |
TCAATTCACCTAATGTAAGC+CGG | - | tig0022001:16479-16498 | None:intergenic | 35.0% | |
TATCATACATAGGGTCTGTT+TGG | + | tig0022001:16582-16601 | Msa1396100:intron | 35.0% | |
!! | ATAAGTTTTGTGAGGCTGTT+TGG | + | tig0022001:16633-16652 | Msa1396100:intron | 35.0% |
!! | TAAGTTTTGTGAGGCTGTTT+GGG | + | tig0022001:16634-16653 | Msa1396100:intron | 35.0% |
AACGAGATTATGTCCCTATT+TGG | - | tig0022001:16819-16838 | None:intergenic | 35.0% | |
AATAGGGACATAATCTCGTT+TGG | + | tig0022001:16819-16838 | Msa1396100:intron | 35.0% | |
ATAGAAGCAGCATTCTTAGA+AGG | - | tig0022001:16979-16998 | None:intergenic | 35.0% | |
TCAAGGATTTATTCCATCGT+TGG | + | tig0022001:17048-17067 | Msa1396100:CDS | 35.0% | |
CAGCTAGTGAGAAAAAATAC+TGG | - | tig0022001:17104-17123 | None:intergenic | 35.0% | |
CAATGAAAATGGCTTATTGG+TGG | - | tig0022001:17193-17212 | None:intergenic | 35.0% | |
!! | CACCAATAAGCCATTTTCAT+TGG | + | tig0022001:17191-17210 | Msa1396100:intron | 35.0% |
AGATCATACAAAGTTGAGGA+AGG | - | tig0022001:17271-17290 | None:intergenic | 35.0% | |
!! | TACCATTGGTGATGTTTATC+AGG | + | tig0022001:17302-17321 | Msa1396100:intron | 35.0% |
!! | GTAACAGACCTTTAAAGTCA+AGG | + | tig0022001:17356-17375 | Msa1396100:CDS | 35.0% |
TCCACTGCCAAAAATATTGA+CGG | - | tig0022001:17440-17459 | None:intergenic | 35.0% | |
GTTAAATTCTTCTCGTCTTC+AGG | + | tig0022001:17465-17484 | Msa1396100:CDS | 35.0% | |
! | ATTTTCCACATGAAGTCCTT+GGG | + | tig0022001:17639-17658 | Msa1396100:CDS | 35.0% |
!! | CTTTTCATTTAGGGCTTTCA+TGG | + | tig0022001:17730-17749 | Msa1396100:intron | 35.0% |
CCCAAGGTAATATTGCAAAA+TGG | + | tig0022001:17781-17800 | Msa1396100:CDS | 35.0% | |
GCAAAATGGAGGAAAAAAGA+AGG | + | tig0022001:17795-17814 | Msa1396100:CDS | 35.0% | |
!!! | TTTTCTTCCTAAGTACTGGA+TGG | + | tig0022001:18050-18069 | Msa1396100:intron | 35.0% |
GGGATATGTTGAATTGTAAC+AGG | - | tig0022001:18139-18158 | None:intergenic | 35.0% | |
! | ATCTGACAGGAAGATTTTCT+TGG | - | tig0022001:18291-18310 | None:intergenic | 35.0% |
AGGCGACGAAAAAATTATGA+TGG | + | tig0022001:18418-18437 | Msa1396100:intron | 35.0% | |
AGTGTATCAAGAGGTTATGA+GGG | - | tig0022001:18484-18503 | None:intergenic | 35.0% | |
! | TTCTAGGAGTGGATCTAAAT+GGG | - | tig0022001:18515-18534 | None:intergenic | 35.0% |
! | TTTCTAGGAGTGGATCTAAA+TGG | - | tig0022001:18516-18535 | None:intergenic | 35.0% |
! | GGATTTAGAATGCTTAGCTT+AGG | - | tig0022001:18562-18581 | None:intergenic | 35.0% |
GAACAAGACACCTTTAAGTA+TGG | - | tig0022001:18617-18636 | None:intergenic | 35.0% | |
! | GCATTATTGTTGGTAAGAAG+TGG | - | tig0022001:18701-18720 | None:intergenic | 35.0% |
GGCAATGTAAGATCGATAAA+TGG | - | tig0022001:18729-18748 | None:intergenic | 35.0% | |
GTGTGAAAAGGCAAAAGAAT+TGG | - | tig0022001:18781-18800 | None:intergenic | 35.0% | |
AACTAAGTGAGTGTGTGAAA+AGG | - | tig0022001:18793-18812 | None:intergenic | 35.0% | |
CGAATATAGGCATGCTTAAA+AGG | - | tig0022001:18880-18899 | None:intergenic | 35.0% | |
!!! | ACATTTTTGTGGATTGGTGT+GGG | - | tig0022001:18945-18964 | None:intergenic | 35.0% |
!!! | AACATTTTTGTGGATTGGTG+TGG | - | tig0022001:18946-18965 | None:intergenic | 35.0% |
! | GTTGCAACATTTTTGTGGAT+TGG | - | tig0022001:18951-18970 | None:intergenic | 35.0% |
GATGCAGTGAAAAATAAGCA+AGG | - | tig0022001:18974-18993 | None:intergenic | 35.0% | |
!! | CTATACATTGTGTTGCTTCT+GGG | + | tig0022001:19043-19062 | Msa1396100:intron | 35.0% |
!! | CTCTCTTTTTGTTTGGGTTT+CGG | + | tig0022001:19157-19176 | Msa1396100:intron | 35.0% |
AAGTTGAAGTGTAAAGCTAG+AGG | + | tig0022001:19248-19267 | Msa1396100:intron | 35.0% | |
AGTTGAAGTGTAAAGCTAGA+GGG | + | tig0022001:19249-19268 | Msa1396100:intron | 35.0% | |
ACTTATACTAACCTCCTAGT+CGG | + | tig0022001:19352-19371 | Msa1396100:intron | 35.0% | |
TTTGGGCCTTCTATTATATC+TGG | + | tig0022001:19637-19656 | Msa1396100:intron | 35.0% | |
!! | CAGATTTCTGGCTAAGATAT+TGG | + | tig0022001:19790-19809 | Msa1396100:intron | 35.0% |
CAAGAGTTGGAACTTAATGT+TGG | - | tig0022001:19876-19895 | None:intergenic | 35.0% | |
GTTGGAAGTAAACATTGCTA+TGG | - | tig0022001:19926-19945 | None:intergenic | 35.0% | |
CAGAAATAAAAGCAACTCCT+GGG | - | tig0022001:20132-20151 | None:intergenic | 35.0% | |
ACAGAAATAAAAGCAACTCC+TGG | - | tig0022001:20133-20152 | None:intergenic | 35.0% | |
TGTTAAACGCTCACTATTAC+TGG | + | tig0022001:20177-20196 | Msa1396100:intron | 35.0% | |
! | TCAATCGTAGAAGTTGTTTC+TGG | - | tig0022001:20510-20529 | None:intergenic | 35.0% |
AAAATGGTCTCACCATTGTT+GGG | - | tig0022001:20581-20600 | None:intergenic | 35.0% | |
TAAAATGGTCTCACCATTGT+TGG | - | tig0022001:20582-20601 | None:intergenic | 35.0% | |
ACCAAGGAAACATTGCTAAA+TGG | + | tig0022001:20673-20692 | Msa1396100:CDS | 35.0% | |
TCCATTTAGCAATGTTTCCT+TGG | - | tig0022001:20677-20696 | None:intergenic | 35.0% | |
!! | AGTGAAAGGCTTTAAGTACA+AGG | - | tig0022001:20954-20973 | None:intergenic | 35.0% |
TTGCACATAATGAAGACTTG+AGG | + | tig0022001:21073-21092 | Msa1396100:intron | 35.0% | |
GAAGGAAACTGTTTAGTACT+AGG | - | tig0022001:21166-21185 | None:intergenic | 35.0% | |
GTATGAAAGAAACCCAAGAA+TGG | + | tig0022001:21192-21211 | Msa1396100:intron | 35.0% | |
CACAAAGCTGGTATTCTATT+TGG | + | tig0022001:21278-21297 | Msa1396100:intron | 35.0% | |
TAGATGGCAAAACTTTATCG+AGG | - | tig0022001:21344-21363 | None:intergenic | 35.0% | |
!! | CTTCACTTTTAGTGTCATGT+TGG | - | tig0022001:21760-21779 | None:intergenic | 35.0% |
AAAATTAGCAACTTTGCAGC+TGG | - | tig0022001:21818-21837 | None:intergenic | 35.0% | |
! | AGCTGCAAAGTTGCTAATTT+TGG | + | tig0022001:21817-21836 | Msa1396100:CDS | 35.0% |
AAGAACATCACCTTTCAGTA+GGG | - | tig0022001:21891-21910 | None:intergenic | 35.0% | |
AAAGAACATCACCTTTCAGT+AGG | - | tig0022001:21892-21911 | None:intergenic | 35.0% | |
ACCTGCTTCATCTAAAGAAA+AGG | + | tig0022001:21943-21962 | Msa1396100:CDS | 35.0% | |
ACCTTGCGAATTTGACTATT+CGG | - | tig0022001:22052-22071 | None:intergenic | 35.0% | |
AATAGTCAAATTCGCAAGGT+AGG | + | tig0022001:22052-22071 | Msa1396100:intron | 35.0% | |
CTTTCACAGAATATGTTGCA+TGG | + | tig0022001:22119-22138 | Msa1396100:intron | 35.0% | |
GACTAAAGGAAGACATTGTT+TGG | + | tig0022001:22193-22212 | Msa1396100:intron | 35.0% | |
!! | ATTGTTTGGTGTCTATCGTT+GGG | + | tig0022001:22207-22226 | Msa1396100:intron | 35.0% |
TAGAGGCGACAAATACAATT+AGG | - | tig0022001:22289-22308 | None:intergenic | 35.0% | |
GAGATGTAAATAGAAAGGAC+AGG | - | tig0022001:22405-22424 | None:intergenic | 35.0% | |
GCAATAATATGCACGACATA+AGG | - | tig0022001:22594-22613 | None:intergenic | 35.0% | |
TCCCTTAGAAAGGATCTTAA+AGG | + | tig0022001:22694-22713 | Msa1396100:CDS | 35.0% | |
! | ACATTTTAGATGTTACGGCT+TGG | + | tig0022001:22744-22763 | Msa1396100:intron | 35.0% |
TATTGGATTACAGATGTACC+AGG | - | tig0022001:22771-22790 | None:intergenic | 35.0% | |
AAAAATGTTCCAGAAGCGAA+TGG | + | tig0022001:22880-22899 | Msa1396100:CDS | 35.0% | |
ATCTTAGGTGTTAGAACTAG+TGG | + | tig0022001:22955-22974 | Msa1396100:intron | 35.0% | |
GCTAGTGGTAAAACATAGAA+AGG | + | tig0022001:23222-23241 | Msa1396100:intron | 35.0% | |
AACATTCTGAGTCGAATTGT+AGG | + | tig0022001:23280-23299 | Msa1396100:intron | 35.0% | |
GTCGAATTGTAGGATCATAT+CGG | + | tig0022001:23290-23309 | Msa1396100:intron | 35.0% | |
ATCTGAGTACATGCAAGAAA+TGG | + | tig0022001:23320-23339 | Msa1396100:intron | 35.0% | |
GTTGCCAAAGTCTAAAAAGT+AGG | + | tig0022001:23370-23389 | Msa1396100:intron | 35.0% | |
!!! | TCGTCCTACTTTTTAGACTT+TGG | - | tig0022001:23377-23396 | None:intergenic | 35.0% |
AAAAGTAGGACGAAAACAGA+TGG | + | tig0022001:23384-23403 | Msa1396100:intron | 35.0% | |
GCTTAACGGAAGAATAAGAA+TGG | + | tig0022001:23488-23507 | Msa1396100:intron | 35.0% | |
GGAAGAATAAGAATGGGATT+AGG | + | tig0022001:23495-23514 | Msa1396100:intron | 35.0% | |
AAGAATGGGATTAGGTTATG+GGG | + | tig0022001:23503-23522 | Msa1396100:intron | 35.0% | |
!! | ATCACATATTTTTCAACCCC+CGG | + | tig0022001:23553-23572 | Msa1396100:intron | 35.0% |
!! | TTTAAGTCAACTTTTTCCGG+GGG | - | tig0022001:23572-23591 | None:intergenic | 35.0% |
!! | CTTTAAGTCAACTTTTTCCG+GGG | - | tig0022001:23573-23592 | None:intergenic | 35.0% |
!! | CCTTTAAGTCAACTTTTTCC+GGG | - | tig0022001:23574-23593 | None:intergenic | 35.0% |
!! | AAGGATTTGTTGCAAAAGGA+AGG | + | tig0022001:23590-23609 | Msa1396100:intron | 35.0% |
!! | AGGATTTGTTGCAAAAGGAA+GGG | + | tig0022001:23591-23610 | Msa1396100:intron | 35.0% |
! | TGGAAGTTTTCCTTAATTGC+AGG | + | tig0022001:23688-23707 | Msa1396100:intron | 35.0% |
TAAAGTAACCGCAATTAAGG+CGG | - | tig0022001:23724-23743 | None:intergenic | 35.0% | |
! | GTCTAAAGTAACCGCAATTA+AGG | - | tig0022001:23727-23746 | None:intergenic | 35.0% |
GTATAGAGAACTTAGGCTTA+AGG | - | tig0022001:23858-23877 | None:intergenic | 35.0% | |
TTGAGAATACGTGAGGATTT+AGG | - | tig0022001:23961-23980 | None:intergenic | 35.0% | |
CATACTGGAATGATGAGAAA+GGG | + | tig0022001:24038-24057 | Msa1396100:CDS | 35.0% | |
ATACTGGAATGATGAGAAAG+GGG | + | tig0022001:24039-24058 | Msa1396100:CDS | 35.0% | |
! | AATCCTTTTGTGTGGCTATA+GGG | + | tig0022001:24155-24174 | Msa1396100:intron | 35.0% |
CAAAATACTCAATCCTTGTG+TGG | + | tig0022001:24198-24217 | Msa1396100:intron | 35.0% | |
! | TAAAATTACCTCTGAGGAGA+TGG | - | tig0022001:24279-24298 | None:intergenic | 35.0% |
TTTGCCAAAACCAATAACTC+CGG | + | tig0022001:24537-24556 | Msa1396100:intron | 35.0% | |
! | TAAGTTTGAAATGCTGCAAG+GGG | - | tig0022001:24574-24593 | None:intergenic | 35.0% |
! | CTAAGTTTGAAATGCTGCAA+GGG | - | tig0022001:24575-24594 | None:intergenic | 35.0% |
AAACTTAGGAATGTATCCTG+TGG | + | tig0022001:24587-24606 | Msa1396100:CDS | 35.0% | |
ATAGCACAGAATTTATCCAC+AGG | - | tig0022001:24606-24625 | None:intergenic | 35.0% | |
CATAAGTAGTTACACAAGAC+AGG | + | tig0022001:24880-24899 | Msa1396100:intron | 35.0% | |
CCTTCTTAATGGTGCTTTAT+TGG | - | tig0022001:24995-25014 | None:intergenic | 35.0% | |
! | CCAATAAAGCACCATTAAGA+AGG | + | tig0022001:24992-25011 | Msa1396100:intron | 35.0% |
ATCCAATCAACCCTTCTTAA+TGG | - | tig0022001:25006-25025 | None:intergenic | 35.0% | |
ATTGGATAGAAGACATGTGT+TGG | + | tig0022001:25019-25038 | Msa1396100:intron | 35.0% | |
TTGGATAGAAGACATGTGTT+GGG | + | tig0022001:25020-25039 | Msa1396100:intron | 35.0% | |
AAACCCAATAAAGCAACAAG+AGG | + | tig0022001:25062-25081 | Msa1396100:intron | 35.0% | |
AACCCAATAAAGCAACAAGA+GGG | + | tig0022001:25063-25082 | Msa1396100:intron | 35.0% | |
GTCCAATAATTAAGTATGGG+GGG | + | tig0022001:25105-25124 | Msa1396100:intron | 35.0% | |
CATCTCCAACTCTCTTATAA+TGG | - | tig0022001:25155-25174 | None:intergenic | 35.0% | |
!! | GGGATTGGCTACATATTATA+CGG | - | tig0022001:25228-25247 | None:intergenic | 35.0% |
TAGGGGAGAATTTAGTCAAA+TGG | + | tig0022001:25287-25306 | Msa1396100:intron | 35.0% | |
AGGGGAGAATTTAGTCAAAT+GGG | + | tig0022001:25288-25307 | Msa1396100:intron | 35.0% | |
TGTGGGTAATTGAATGGAAT+TGG | - | tig0022001:25337-25356 | None:intergenic | 35.0% | |
TCTACTTGTGGGTAATTGAA+TGG | - | tig0022001:25343-25362 | None:intergenic | 35.0% | |
! | TTGTATTTTGCCTGTGATCT+CGG | + | tig0022001:25438-25457 | Msa1396100:intron | 35.0% |
TAGAAATTAACCGAGATCAC+AGG | - | tig0022001:25451-25470 | None:intergenic | 35.0% | |
GAGTAGAAAAAGATGTAAGC+TGG | - | tig0022001:25529-25548 | None:intergenic | 35.0% | |
! | AAGTTGGAGGTATGTGTAAT+TGG | + | tig0022001:26129-26148 | Msa1396100:intron | 35.0% |
CACATAAAAAGCCACCTATA+TGG | - | tig0022001:26246-26265 | None:intergenic | 35.0% | |
! | TATAGGTGGCTTTTTATGTG+CGG | + | tig0022001:26246-26265 | Msa1396100:intron | 35.0% |
ATGTGCGGACAAATTATTTC+TGG | + | tig0022001:26261-26280 | Msa1396100:intron | 35.0% | |
! | TGTGCGGACAAATTATTTCT+GGG | + | tig0022001:26262-26281 | Msa1396100:intron | 35.0% |
TAAGCAGAGTAAAAACAAGG+TGG | + | tig0022001:26445-26464 | Msa1396100:intron | 35.0% | |
! | GTGCCTCAATGAAGTATTAA+TGG | - | tig0022001:26500-26519 | None:intergenic | 35.0% |
! | ATAAGCCAACCTTTAAAAGG+TGG | - | tig0022001:26591-26610 | None:intergenic | 35.0% |
CACATAAGCCAACCTTTAAA+AGG | - | tig0022001:26594-26613 | None:intergenic | 35.0% | |
!!! | CTTTTAAAGGTTGGCTTATG+TGG | + | tig0022001:26592-26611 | Msa1396100:intron | 35.0% |
! | GTGGTTTATCTCTATTTTGC+AGG | + | tig0022001:26611-26630 | Msa1396100:intron | 35.0% |
AAGCACAATAATCAAACACC+AGG | - | tig0022001:26713-26732 | None:intergenic | 35.0% | |
GTGTGTATTTGCTCAAGATA+TGG | - | tig0022001:26853-26872 | None:intergenic | 35.0% | |
AGGGGGTTTATGAATGATGA+TGG | + | tig0022001:16112-16131 | Msa1396100:intron | 40.0% | |
! | GATGGTTATAGTGCTGAGTT+TGG | + | tig0022001:16262-16281 | Msa1396100:intron | 40.0% |
TAGCAAGTTCGTAGTGTTGT+TGG | + | tig0022001:16519-16538 | Msa1396100:intron | 40.0% | |
!! | CTACTGGCATAAGTTTTGTG+AGG | + | tig0022001:16625-16644 | Msa1396100:intron | 40.0% |
! | TGGCATGGCATCTTTTACTT+AGG | + | tig0022001:16842-16861 | Msa1396100:intron | 40.0% |
TAGATTCCCATTACCAACGA+TGG | - | tig0022001:17064-17083 | None:intergenic | 40.0% | |
!! | TCGTTGGTAATGGGAATCTA+AGG | + | tig0022001:17064-17083 | Msa1396100:CDS | 40.0% |
! | CTTATTGGTGGTCGAAAAAG+GGG | - | tig0022001:17181-17200 | None:intergenic | 40.0% |
! | GCTTATTGGTGGTCGAAAAA+GGG | - | tig0022001:17182-17201 | None:intergenic | 40.0% |
TCATACAAAGTTGAGGAAGG+AGG | - | tig0022001:17268-17287 | None:intergenic | 40.0% | |
!!! | ACCGTCAATATTTTTGGCAG+TGG | + | tig0022001:17436-17455 | Msa1396100:intron | 40.0% |
! | GATTTTCCACATGAAGTCCT+TGG | + | tig0022001:17638-17657 | Msa1396100:intron | 40.0% |
ACCATTGTAGGAGATAAAGC+TGG | - | tig0022001:17668-17687 | None:intergenic | 40.0% | |
! | TTCTCTTTGTTTCAGACCCA+AGG | + | tig0022001:17765-17784 | Msa1396100:intron | 40.0% |
GAGGAAAAAAGAAGGGGATA+AGG | + | tig0022001:17803-17822 | Msa1396100:CDS | 40.0% | |
TTAAAGGCCATCCAGTACTT+AGG | - | tig0022001:18060-18079 | None:intergenic | 40.0% | |
ACAATTCAACATATCCCAGC+TGG | + | tig0022001:18142-18161 | Msa1396100:intron | 40.0% | |
TTGGACTGTCAAGTCATACT+GGG | - | tig0022001:18272-18291 | None:intergenic | 40.0% | |
GTCTTACTAGGAAATCTGAC+AGG | - | tig0022001:18304-18323 | None:intergenic | 40.0% | |
ATCTTATCACATCCAAGAGC+GGG | - | tig0022001:18352-18371 | None:intergenic | 40.0% | |
CATCTTATCACATCCAAGAG+CGG | - | tig0022001:18353-18372 | None:intergenic | 40.0% | |
!! | ACGTGCTTTAAGAAAAGGGA+GGG | - | tig0022001:18377-18396 | None:intergenic | 40.0% |
!! | TACGTGCTTTAAGAAAAGGG+AGG | - | tig0022001:18378-18397 | None:intergenic | 40.0% |
GTGTATCAAGAGGTTATGAG+GGG | - | tig0022001:18483-18502 | None:intergenic | 40.0% | |
GAGTGTATCAAGAGGTTATG+AGG | - | tig0022001:18485-18504 | None:intergenic | 40.0% | |
GAAGTGGAAGAAGGATATTG+TGG | - | tig0022001:18685-18704 | None:intergenic | 40.0% | |
! | TGTTGGTAAGAAGTGGAAGA+AGG | - | tig0022001:18694-18713 | None:intergenic | 40.0% |
AATGGGGTAGGCATTATTGT+TGG | - | tig0022001:18711-18730 | None:intergenic | 40.0% | |
GTAAGATCGATAAATGGGGT+AGG | - | tig0022001:18723-18742 | None:intergenic | 40.0% | |
ATTACGAGGAGGATCAATTG+TGG | - | tig0022001:18829-18848 | None:intergenic | 40.0% | |
! | TAGTGGACACAATGATTACG+AGG | - | tig0022001:18843-18862 | None:intergenic | 40.0% |
ATTGTGTCCACTATTTCCGT+AGG | + | tig0022001:18850-18869 | Msa1396100:intron | 40.0% | |
AGGAAAACCTACGGAAATAG+TGG | - | tig0022001:18860-18879 | None:intergenic | 40.0% | |
! | CAAGGGTTGCAACATTTTTG+TGG | - | tig0022001:18956-18975 | None:intergenic | 40.0% |
!! | GCTTATTTTTCACTGCATCC+AGG | + | tig0022001:18975-18994 | Msa1396100:intron | 40.0% |
! | TATTTTTCACTGCATCCAGG+TGG | + | tig0022001:18978-18997 | Msa1396100:intron | 40.0% |
!! | GCTATACATTGTGTTGCTTC+TGG | + | tig0022001:19042-19061 | Msa1396100:intron | 40.0% |
! | GATTCGACCAAGTTTTACGT+TGG | + | tig0022001:19113-19132 | Msa1396100:intron | 40.0% |
CGAAACCCAAACAAAAAGAG+AGG | - | tig0022001:19159-19178 | None:intergenic | 40.0% | |
ATGCATAGCAAGGCTAACAT+AGG | + | tig0022001:19186-19205 | Msa1396100:intron | 40.0% | |
! | CAGTTAGACGAGTATTGTGA+TGG | - | tig0022001:19452-19471 | None:intergenic | 40.0% |
CATCACAATACTCGTCTAAC+TGG | + | tig0022001:19450-19469 | Msa1396100:intron | 40.0% | |
GAATGACTACAATTCAAGGG+TGG | - | tig0022001:19496-19515 | None:intergenic | 40.0% | |
TATCTTAGCCAGAAATCTGC+AGG | - | tig0022001:19789-19808 | None:intergenic | 40.0% | |
GCTAAGATATTGGTACCTGA+TGG | + | tig0022001:19800-19819 | Msa1396100:CDS | 40.0% | |
ATTGGTACCTGATGGTTCAA+AGG | + | tig0022001:19808-19827 | Msa1396100:CDS | 40.0% | |
TCTGCAGAATCCAGTAATGT+TGG | - | tig0022001:19944-19963 | None:intergenic | 40.0% | |
CACTTGAACTCCAGAATTGT+AGG | - | tig0022001:20324-20343 | None:intergenic | 40.0% | |
TCAAAATGTTCCTGCTTCTG+TGG | + | tig0022001:20419-20438 | Msa1396100:CDS | 40.0% | |
CAAAATGTTCCTGCTTCTGT+GGG | + | tig0022001:20420-20439 | Msa1396100:CDS | 40.0% | |
AAAATGTTCCTGCTTCTGTG+GGG | + | tig0022001:20421-20440 | Msa1396100:CDS | 40.0% | |
ATTCCAAGAACAATGTGAGG+TGG | - | tig0022001:20546-20565 | None:intergenic | 40.0% | |
AAATGGTCTCACCATTGTTG+GGG | - | tig0022001:20580-20599 | None:intergenic | 40.0% | |
TGAAAGAAACCCAAGAATGG+TGG | + | tig0022001:21195-21214 | Msa1396100:intron | 40.0% | |
! | CCAGCTTTGTGCTAAAAAAC+TGG | - | tig0022001:21269-21288 | None:intergenic | 40.0% |
!!! | CCAGTTTTTTAGCACAAAGC+TGG | + | tig0022001:21266-21285 | Msa1396100:intron | 40.0% |
!! | ACATAAGTTGGTCAGCTAGA+TGG | - | tig0022001:21360-21379 | None:intergenic | 40.0% |
ACCAGAAGGTTCAAAAGAAG+TGG | + | tig0022001:21421-21440 | Msa1396100:CDS | 40.0% | |
! | AAGTTTGAGTTCCAACGATC+TGG | + | tig0022001:21515-21534 | Msa1396100:intron | 40.0% |
AAAAGTAGATGCCAGATCGT+TGG | - | tig0022001:21529-21548 | None:intergenic | 40.0% | |
! | ACTTTTAGTGTCATGTTGGG+TGG | - | tig0022001:21756-21775 | None:intergenic | 40.0% |
GCATCAACATTGAATGCAAC+TGG | + | tig0022001:21854-21873 | Msa1396100:CDS | 40.0% | |
! | GCCTTTTCTTTAGATGAAGC+AGG | - | tig0022001:21947-21966 | None:intergenic | 40.0% |
TCCGAATAGTCAAATTCGCA+AGG | + | tig0022001:22048-22067 | Msa1396100:CDS | 40.0% | |
!! | CATTGTTTGGTGTCTATCGT+TGG | + | tig0022001:22206-22225 | Msa1396100:intron | 40.0% |
! | TTTTGTAGGTGATTGCCAAG+AGG | + | tig0022001:22512-22531 | Msa1396100:intron | 40.0% |
GAATGTGTCAGATGTTACAC+TGG | + | tig0022001:22660-22679 | Msa1396100:intron | 40.0% | |
TCCTCTTCTTTCCCTTAGAA+AGG | + | tig0022001:22684-22703 | Msa1396100:CDS | 40.0% | |
! | TCCTTTCTAAGGGAAAGAAG+AGG | - | tig0022001:22688-22707 | None:intergenic | 40.0% |
AACTGTTTACCATTCGCTTC+TGG | - | tig0022001:22892-22911 | None:intergenic | 40.0% | |
!!! | CTTTGCGAGTTTGGTTTTGT+GGG | - | tig0022001:23113-23132 | None:intergenic | 40.0% |
TTCATAACCATGTGGCTAGA+AGG | + | tig0022001:23183-23202 | Msa1396100:intron | 40.0% | |
AGAAATGGAGACAGAAACTG+TGG | + | tig0022001:23335-23354 | Msa1396100:intron | 40.0% | |
TAGGTTATGGGGAATTGTAC+TGG | + | tig0022001:23514-23533 | Msa1396100:intron | 40.0% | |
! | CCCGGAAAAAGTTGACTTAA+AGG | + | tig0022001:23571-23590 | Msa1396100:intron | 40.0% |
TTTGTTGCAAAAGGAAGGGA+TGG | + | tig0022001:23595-23614 | Msa1396100:intron | 40.0% | |
TTAGGCCATATCTAGCACAA+AGG | - | tig0022001:23773-23792 | None:intergenic | 40.0% | |
TATGGCCTAAGTAGTACGTA+AGG | + | tig0022001:23783-23802 | Msa1396100:intron | 40.0% | |
CCAAACCTTACGTACTACTT+AGG | - | tig0022001:23791-23810 | None:intergenic | 40.0% | |
CCTAAGTAGTACGTAAGGTT+TGG | + | tig0022001:23788-23807 | Msa1396100:intron | 40.0% | |
!!! | TCTGGTTTTGAGAATACGTG+AGG | - | tig0022001:23968-23987 | None:intergenic | 40.0% |
TATGCTGCCATAGTGTAAGT+TGG | - | tig0022001:24022-24041 | None:intergenic | 40.0% | |
GCATACTGGAATGATGAGAA+AGG | + | tig0022001:24037-24056 | Msa1396100:intron | 40.0% | |
ACCATCAATTACCTTCTCTG+TGG | - | tig0022001:24107-24126 | None:intergenic | 40.0% | |
! | CAATCCTTTTGTGTGGCTAT+AGG | + | tig0022001:24154-24173 | Msa1396100:intron | 40.0% |
TCAATCCTTGTGTGGCTATA+GGG | + | tig0022001:24206-24225 | Msa1396100:intron | 40.0% | |
TTTAGTGGCACTTTAGGTCA+AGG | + | tig0022001:24384-24403 | Msa1396100:intron | 40.0% | |
TTGAAGCCGCAAGAATTTCA+AGG | + | tig0022001:24436-24455 | Msa1396100:CDS | 40.0% | |
TGAAGCCGCAAGAATTTCAA+GGG | + | tig0022001:24437-24456 | Msa1396100:CDS | 40.0% | |
! | AATTTCAAGGGGGGACTTTT+AGG | + | tig0022001:24449-24468 | Msa1396100:CDS | 40.0% |
TTGCCAAAACCAATAACTCC+GGG | + | tig0022001:24538-24557 | Msa1396100:intron | 40.0% | |
! | CCTAAGTTTGAAATGCTGCA+AGG | - | tig0022001:24576-24595 | None:intergenic | 40.0% |
CCTTGCAGCATTTCAAACTT+AGG | + | tig0022001:24573-24592 | Msa1396100:intron | 40.0% | |
TGCTATTATAAATCCCCCAC+AGG | + | tig0022001:24620-24639 | Msa1396100:CDS | 40.0% | |
CAACATTCACCCCTAATACA+AGG | - | tig0022001:24799-24818 | None:intergenic | 40.0% | |
CTTGTATTAGGGGTGAATGT+TGG | + | tig0022001:24797-24816 | Msa1396100:intron | 40.0% | |
! | CACCATTAAGAAGGGTTGAT+TGG | + | tig0022001:25001-25020 | Msa1396100:intron | 40.0% |
ACCCAATAAAGCAACAAGAG+GGG | + | tig0022001:25064-25083 | Msa1396100:intron | 40.0% | |
!! | ACCCCTCTTGTTGCTTTATT+GGG | - | tig0022001:25068-25087 | None:intergenic | 40.0% |
!! | AACCCCTCTTGTTGCTTTAT+TGG | - | tig0022001:25069-25088 | None:intergenic | 40.0% |
GTCCCCCCATACTTAATTAT+TGG | - | tig0022001:25110-25129 | None:intergenic | 40.0% | |
! | AAGACTTTTCCGAACAAGGT+GGG | - | tig0022001:25248-25267 | None:intergenic | 40.0% |
! | AACCAAGACTTTTCCGAACA+AGG | - | tig0022001:25252-25271 | None:intergenic | 40.0% |
! | AAACTTGGGCAACTGTTTCT+CGG | - | tig0022001:25802-25821 | None:intergenic | 40.0% |
TTCAACTTAGTGGCAACAGA+TGG | - | tig0022001:26071-26090 | None:intergenic | 40.0% | |
ACGCTGCAATAATGGTTCAT+AGG | - | tig0022001:26567-26586 | None:intergenic | 40.0% | |
! | TGACATACGACACATTTTCC+TGG | + | tig0022001:26692-26711 | Msa1396100:three_prime_UTR | 40.0% |
TCTTGAGCAAATACACACCA+AGG | + | tig0022001:26855-26874 | Msa1396100:three_prime_UTR | 40.0% | |
CCTAATGTTAGATGGTACCT+TGG | - | tig0022001:26875-26894 | None:intergenic | 40.0% | |
! | CCAAGGTACCATCTAACATT+AGG | + | tig0022001:26872-26891 | Msa1396100:three_prime_UTR | 40.0% |
GTTGGAAGCCTAATGTTAGA+TGG | - | tig0022001:26883-26902 | None:intergenic | 40.0% | |
GAACACAATTACCAACATGC+TGG | - | tig0022001:26931-26950 | None:intergenic | 40.0% | |
GGATGGAATGAGAGATGAGA+GGG | - | tig0022001:15883-15902 | None:intergenic | 45.0% | |
TGGTGGAAGAAGAGAGGATA+CGG | - | tig0022001:15904-15923 | None:intergenic | 45.0% | |
TACGTACCTCGAAATGGATC+TGG | - | tig0022001:15924-15943 | None:intergenic | 45.0% | |
GAGTACTACGTACCTCGAAA+TGG | - | tig0022001:15930-15949 | None:intergenic | 45.0% | |
TTTACTTTGCACGAGTCGTC+CGG | + | tig0022001:16457-16476 | Msa1396100:intron | 45.0% | |
AGGGACATAATCTCGTTTGG+TGG | + | tig0022001:16822-16841 | Msa1396100:intron | 45.0% | |
! | CATAATCTCGTTTGGTGGCA+TGG | + | tig0022001:16827-16846 | Msa1396100:intron | 45.0% |
GGCACAGAACTCCTAATTCA+AGG | + | tig0022001:17031-17050 | Msa1396100:intron | 45.0% | |
! | GGCTTATTGGTGGTCGAAAA+AGG | - | tig0022001:17183-17202 | None:intergenic | 45.0% |
GGCCTGATAAACATCACCAA+TGG | - | tig0022001:17307-17326 | None:intergenic | 45.0% | |
TGTTTATCAGGCCTGCATCT+TGG | + | tig0022001:17314-17333 | Msa1396100:intron | 45.0% | |
! | GCCAGCTTTATCTCCTACAA+TGG | + | tig0022001:17664-17683 | Msa1396100:CDS | 45.0% |
ATCTCCTACAATGGTGAGCT+TGG | + | tig0022001:17673-17692 | Msa1396100:intron | 45.0% | |
TTCTCCAAGCTCACCATTGT+AGG | - | tig0022001:17680-17699 | None:intergenic | 45.0% | |
! | GGGTCTGAAACAAAGAGAAG+AGG | - | tig0022001:17764-17783 | None:intergenic | 45.0% |
AGTTGCTAAACAGTCCAGCT+GGG | - | tig0022001:18159-18178 | None:intergenic | 45.0% | |
AAGTTGCTAAACAGTCCAGC+TGG | - | tig0022001:18160-18179 | None:intergenic | 45.0% | |
GCTCGTGATATGTGTATCTC+AGG | + | tig0022001:18187-18206 | Msa1396100:intron | 45.0% | |
TGTGTATCTCAGGCCATCTT+TGG | + | tig0022001:18197-18216 | Msa1396100:intron | 45.0% | |
CTTGGACTGTCAAGTCATAC+TGG | - | tig0022001:18273-18292 | None:intergenic | 45.0% | |
TCTTATCACATCCAAGAGCG+GGG | - | tig0022001:18351-18370 | None:intergenic | 45.0% | |
!! | CGTGCTTTAAGAAAAGGGAG+GGG | - | tig0022001:18376-18395 | None:intergenic | 45.0% |
GCATGTCAGAGTGTATCAAG+AGG | - | tig0022001:18493-18512 | None:intergenic | 45.0% | |
TGGACACAATGATTACGAGG+AGG | - | tig0022001:18840-18859 | None:intergenic | 45.0% | |
TTGGTCGAATCAATACGGCA+TGG | - | tig0022001:19104-19123 | None:intergenic | 45.0% | |
! | AGTTAATGCTACCGACTAGG+AGG | - | tig0022001:19366-19385 | None:intergenic | 45.0% |
! | CTCAGTTAATGCTACCGACT+AGG | - | tig0022001:19369-19388 | None:intergenic | 45.0% |
ATTGCAATCGGTTGTCCAAC+TGG | - | tig0022001:19839-19858 | None:intergenic | 45.0% | |
TTGCAATTTATCCGTTGCCC+AGG | + | tig0022001:20112-20131 | Msa1396100:intron | 45.0% | |
TAAAAGCAACTCCTGGGCAA+CGG | - | tig0022001:20126-20145 | None:intergenic | 45.0% | |
CACACACACACATTTGCCAT+AGG | + | tig0022001:20239-20258 | Msa1396100:intron | 45.0% | |
GAGCTGGAATAGACTTCCTA+TGG | - | tig0022001:20258-20277 | None:intergenic | 45.0% | |
GGAAGTCTATTCCAGCTCAT+TGG | + | tig0022001:20260-20279 | Msa1396100:intron | 45.0% | |
! | TCTAACGGTGAGCTTTGACA+AGG | + | tig0022001:20377-20396 | Msa1396100:intron | 45.0% |
AAATGTTCCTGCTTCTGTGG+GGG | + | tig0022001:20422-20441 | Msa1396100:CDS | 45.0% | |
! | TGGTTTTCTCTCCTCAACTG+CGG | - | tig0022001:20490-20509 | None:intergenic | 45.0% |
CTTCCACCTCACATTGTTCT+TGG | + | tig0022001:20540-20559 | Msa1396100:CDS | 45.0% | |
GGCATTCCAAGAACAATGTG+AGG | - | tig0022001:20549-20568 | None:intergenic | 45.0% | |
CAACATGTTGCAATGCGAAC+AGG | - | tig0022001:21002-21021 | None:intergenic | 45.0% | |
! | AGAGGTTAGCCACCATTCTT+GGG | - | tig0022001:21207-21226 | None:intergenic | 45.0% |
! | AAGAGGTTAGCCACCATTCT+TGG | - | tig0022001:21208-21227 | None:intergenic | 45.0% |
!! | GTCTGACATTTTGAGGGACT+AGG | + | tig0022001:21378-21397 | Msa1396100:intron | 45.0% |
CTGGTGCAACTATCTTAGCT+AGG | - | tig0022001:21406-21425 | None:intergenic | 45.0% | |
GCTAAGATAGTTGCACCAGA+AGG | + | tig0022001:21407-21426 | Msa1396100:CDS | 45.0% | |
! | GCCACTTCTTTTGAACCTTC+TGG | - | tig0022001:21425-21444 | None:intergenic | 45.0% |
GGTTCAAAAGAAGTGGCAGT+TGG | + | tig0022001:21428-21447 | Msa1396100:CDS | 45.0% | |
CAGCAGCTCAGTAAACCAAA+AGG | + | tig0022001:21724-21743 | Msa1396100:CDS | 45.0% | |
TTGAATGCAACTGGTCCTCA+CGG | + | tig0022001:21863-21882 | Msa1396100:CDS | 45.0% | |
GGTGATTGCCAAGAGGTTAT+TGG | + | tig0022001:22519-22538 | Msa1396100:intron | 45.0% | |
GTCATACTGCTCTGCAATGA+AGG | - | tig0022001:22809-22828 | None:intergenic | 45.0% | |
GGTGTTAGAACTAGTGGTGA+CGG | + | tig0022001:22961-22980 | Msa1396100:intron | 45.0% | |
!!! | CCTTTGCGAGTTTGGTTTTG+TGG | - | tig0022001:23114-23133 | None:intergenic | 45.0% |
CCACAAAACCAAACTCGCAA+AGG | + | tig0022001:23111-23130 | Msa1396100:intron | 45.0% | |
TCAAACAGCCTTTGCGAGTT+TGG | - | tig0022001:23122-23141 | None:intergenic | 45.0% | |
AGCCACATGGTTATGAAGCT+CGG | - | tig0022001:23180-23199 | None:intergenic | 45.0% | |
! | CATATCTAGCACAAAGGTGC+TGG | - | tig0022001:23767-23786 | None:intergenic | 45.0% |
CAGCACCTTTGTGCTAGATA+TGG | + | tig0022001:23765-23784 | Msa1396100:intron | 45.0% | |
TGAGGATTTAGGCTTCTGCA+AGG | - | tig0022001:23950-23969 | None:intergenic | 45.0% | |
CTTACACTATGGCAGCATAC+TGG | + | tig0022001:24023-24042 | Msa1396100:intron | 45.0% | |
AATAGCAGTTGCCACAGAGA+AGG | + | tig0022001:24093-24112 | Msa1396100:CDS | 45.0% | |
GCCACAGAGAAGGTAATTGA+TGG | + | tig0022001:24103-24122 | Msa1396100:intron | 45.0% | |
AAGCCCTATAGCCACACAAA+AGG | - | tig0022001:24161-24180 | None:intergenic | 45.0% | |
CTCAATCCTTGTGTGGCTAT+AGG | + | tig0022001:24205-24224 | Msa1396100:intron | 45.0% | |
AATATCTGCCATCTCCTCAG+AGG | + | tig0022001:24268-24287 | Msa1396100:CDS | 45.0% | |
TAGCTGCAAAAGCTCGTGAA+GGG | + | tig0022001:24410-24429 | Msa1396100:CDS | 45.0% | |
GAAGCCGCAAGAATTTCAAG+GGG | + | tig0022001:24438-24457 | Msa1396100:CDS | 45.0% | |
AAGCCGCAAGAATTTCAAGG+GGG | + | tig0022001:24439-24458 | Msa1396100:CDS | 45.0% | |
AGCGAATTTCCCGACATTCA+TGG | - | tig0022001:24502-24521 | None:intergenic | 45.0% | |
!!! | AAGCCCGGAGTTATTGGTTT+TGG | - | tig0022001:24544-24563 | None:intergenic | 45.0% |
TGTACAAAGCCCGGAGTTAT+TGG | - | tig0022001:24550-24569 | None:intergenic | 45.0% | |
AGACATGTGTTGGGTGTTTG+TGG | + | tig0022001:25029-25048 | Msa1396100:intron | 45.0% | |
GACATGTGTTGGGTGTTTGT+GGG | + | tig0022001:25030-25049 | Msa1396100:intron | 45.0% | |
ACATGTGTTGGGTGTTTGTG+GGG | + | tig0022001:25031-25050 | Msa1396100:intron | 45.0% | |
! | AAGCAACAAGAGGGGTTGAT+TGG | + | tig0022001:25072-25091 | Msa1396100:intron | 45.0% |
! | TTTTCCGAACAAGGTGGGAT+TGG | - | tig0022001:25243-25262 | None:intergenic | 45.0% |
! | CAAGACTTTTCCGAACAAGG+TGG | - | tig0022001:25249-25268 | None:intergenic | 45.0% |
CACCTTGTTCGGAAAAGTCT+TGG | + | tig0022001:25247-25266 | Msa1396100:intron | 45.0% | |
GTTGTATATCTGCCTTGTGC+AGG | + | tig0022001:25310-25329 | Msa1396100:intron | 45.0% | |
AATGGAATTGGACCTGCACA+AGG | - | tig0022001:25325-25344 | None:intergenic | 45.0% | |
CCTTTGTTCACCACGATACT+TGG | - | tig0022001:25578-25597 | None:intergenic | 45.0% | |
! | CCAAGTATCGTGGTGAACAA+AGG | + | tig0022001:25575-25594 | Msa1396100:intron | 45.0% |
CCCAAAGGGATTGGAAACTT+GGG | - | tig0022001:25816-25835 | None:intergenic | 45.0% | |
CCCAAGTTTCCAATCCCTTT+GGG | + | tig0022001:25813-25832 | Msa1396100:intron | 45.0% | |
CCAAGTTTCCAATCCCTTTG+GGG | + | tig0022001:25814-25833 | Msa1396100:intron | 45.0% | |
! | TTTGAAATCCAGGCCCCAAA+GGG | - | tig0022001:25830-25849 | None:intergenic | 45.0% |
!!! | TTTTGAAATCCAGGCCCCAA+AGG | - | tig0022001:25831-25850 | None:intergenic | 45.0% |
TACTTTGTTGCCTCTCCCTA+CGG | - | tig0022001:25934-25953 | None:intergenic | 45.0% | |
GAAGCAGTAATTGGAGCTGA+TGG | + | tig0022001:25957-25976 | Msa1396100:CDS | 45.0% | |
! | GTCTTTGATGGCAAAGTTGG+AGG | + | tig0022001:26116-26135 | Msa1396100:CDS | 45.0% |
AAGGTGGAACGCTGCAATAA+TGG | - | tig0022001:26575-26594 | None:intergenic | 45.0% | |
! | TGCAGCGTTCCACCTTTTAA+AGG | + | tig0022001:26579-26598 | Msa1396100:intron | 45.0% |
!! | GCGTTCCACCTTTTAAAGGT+TGG | + | tig0022001:26583-26602 | Msa1396100:intron | 45.0% |
! | CATGTTGATGAACCACAACC+TGG | + | tig0022001:26745-26764 | Msa1396100:three_prime_UTR | 45.0% |
ATGTTATGCAACTCCAAGCC+AGG | - | tig0022001:26766-26785 | None:intergenic | 45.0% | |
CAACTGAGATTCCAGCATGT+TGG | + | tig0022001:26917-26936 | Msa1396100:three_prime_UTR | 45.0% | |
CGGATGGAATGAGAGATGAG+AGG | - | tig0022001:15884-15903 | None:intergenic | 50.0% | |
GGAAGAAGAGAGGATACGGA+TGG | - | tig0022001:15900-15919 | None:intergenic | 50.0% | |
TGGATCTGGTGGAAGAAGAG+AGG | - | tig0022001:15910-15929 | None:intergenic | 50.0% | |
CTTCCACCAGATCCATTTCG+AGG | + | tig0022001:15915-15934 | Msa1396100:CDS | 50.0% | |
GTACCTCGAAATGGATCTGG+TGG | - | tig0022001:15921-15940 | None:intergenic | 50.0% | |
GAGGAAGGAGGATGAACTAG+AGG | - | tig0022001:17256-17275 | None:intergenic | 50.0% | |
GAGATAAAGCTGGCATCCCA+AGG | - | tig0022001:17658-17677 | None:intergenic | 50.0% | |
ACTGGGAGAGAGCTTGATAC+TGG | - | tig0022001:18255-18274 | None:intergenic | 50.0% | |
TTCACCTCTCCGAGGACATA+TGG | + | tig0022001:18455-18474 | Msa1396100:intron | 50.0% | |
TGAGGGGTTCCATATGTCCT+CGG | - | tig0022001:18467-18486 | None:intergenic | 50.0% | |
! | TTTTCACTGCATCCAGGTGG+TGG | + | tig0022001:18981-19000 | Msa1396100:intron | 50.0% |
TCGGACGACTATGCATAGCA+AGG | + | tig0022001:19176-19195 | Msa1396100:intron | 50.0% | |
TGTGATGGTCATACAGCACC+AGG | - | tig0022001:19437-19456 | None:intergenic | 50.0% | |
GGATGACTCCTGCAGATTTC+TGG | + | tig0022001:19778-19797 | Msa1396100:intron | 50.0% | |
GGCACATCCTTTGAACCATC+AGG | - | tig0022001:19818-19837 | None:intergenic | 50.0% | |
GGTTCAAAGGATGTGCCAGT+TGG | + | tig0022001:19821-19840 | Msa1396100:CDS | 50.0% | |
! | GGTGAGCTTTGACAAGGTTG+AGG | + | tig0022001:20383-20402 | Msa1396100:intron | 50.0% |
AATGTTCCTGCTTCTGTGGG+GGG | + | tig0022001:20423-20442 | Msa1396100:CDS | 50.0% | |
AGAGAAGAAACCAGCACACC+AGG | + | tig0022001:20461-20480 | Msa1396100:CDS | 50.0% | |
ACCATTGTTGGGGACAAAGC+AGG | - | tig0022001:20570-20589 | None:intergenic | 50.0% | |
CTTCAACCTTGCGAAAGAGC+AGG | - | tig0022001:21667-21686 | None:intergenic | 50.0% | |
! | GTTGGGTGGTCTTCTCCTTT+TGG | - | tig0022001:21742-21761 | None:intergenic | 50.0% |
!! | TAGATGTTACGGCTTGGTCC+TGG | + | tig0022001:22750-22769 | Msa1396100:intron | 50.0% |
CCACATGGTTATGAAGCTCG+GGG | - | tig0022001:23178-23197 | None:intergenic | 50.0% | |
GCCACATGGTTATGAAGCTC+GGG | - | tig0022001:23179-23198 | None:intergenic | 50.0% | |
GCTAGAAGGCTGTTGGAGAT+AGG | + | tig0022001:23197-23216 | Msa1396100:intron | 50.0% | |
AGAAGGCTGTTGGAGATAGG+TGG | + | tig0022001:23200-23219 | Msa1396100:intron | 50.0% | |
TGTTGGAGATAGGTGGCTAG+TGG | + | tig0022001:23207-23226 | Msa1396100:intron | 50.0% | |
GAAACTGTGGCAGACAGTGA+TGG | + | tig0022001:23348-23367 | Msa1396100:intron | 50.0% | |
CTGGAAGTGGCCTGCAATTA+AGG | - | tig0022001:23701-23720 | None:intergenic | 50.0% | |
ACTTCCAGCCGCCTTAATTG+CGG | + | tig0022001:23713-23732 | Msa1396100:intron | 50.0% | |
!! | ATCTAGCACAAAGGTGCTGG+AGG | - | tig0022001:23764-23783 | None:intergenic | 50.0% |
TCAAGCCCTATAGCCACACA+AGG | - | tig0022001:24163-24182 | None:intergenic | 50.0% | |
CTAGCTGCAAAAGCTCGTGA+AGG | + | tig0022001:24409-24428 | Msa1396100:CDS | 50.0% | |
AGCCGCAAGAATTTCAAGGG+GGG | + | tig0022001:24440-24459 | Msa1396100:CDS | 50.0% | |
GTCCCCCCTTGAAATTCTTG+CGG | - | tig0022001:24445-24464 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAACCTGTG+GGG | - | tig0022001:24637-24656 | None:intergenic | 50.0% | |
GAGAGAGAGAGAGAACCTGT+GGG | - | tig0022001:24638-24657 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAACCTG+TGG | - | tig0022001:24639-24658 | None:intergenic | 50.0% | |
GGGGACCGAGAAAAAACTGT+AGG | + | tig0022001:25124-25143 | Msa1396100:intron | 50.0% | |
GTAGCCAATCCCACCTTGTT+CGG | + | tig0022001:25236-25255 | Msa1396100:intron | 50.0% | |
ACTTGGCCCCTTCGTTGAAA+TGG | - | tig0022001:25561-25580 | None:intergenic | 50.0% | |
GCCCAAGTTTCCAATCCCTT+TGG | + | tig0022001:25812-25831 | Msa1396100:intron | 50.0% | |
CCCCAAAGGGATTGGAAACT+TGG | - | tig0022001:25817-25836 | None:intergenic | 50.0% | |
AGGCTTGCATTCTTGCCGTA+GGG | + | tig0022001:25916-25935 | Msa1396100:intron | 50.0% | |
! | GCCATCAAAGACGCGTTGAT+CGG | - | tig0022001:26108-26127 | None:intergenic | 50.0% |
! | CGCGTCTTTGATGGCAAAGT+TGG | + | tig0022001:26113-26132 | Msa1396100:CDS | 50.0% |
TGATGAACCACAACCTGGCT+TGG | + | tig0022001:26750-26769 | Msa1396100:three_prime_UTR | 50.0% | |
GAGAGATGAGAGGGTGACGA+AGG | - | tig0022001:15874-15893 | None:intergenic | 55.0% | |
CGAGTCGTCCGGCTTACATT+AGG | + | tig0022001:16468-16487 | Msa1396100:intron | 55.0% | |
ATCAGGCCTGCATCTTGGTC+TGG | + | tig0022001:17319-17338 | Msa1396100:intron | 55.0% | |
TCAGGCCTGCATCTTGGTCT+GGG | + | tig0022001:17320-17339 | Msa1396100:intron | 55.0% | |
GTAAGCCCAGACCAAGATGC+AGG | - | tig0022001:17328-17347 | None:intergenic | 55.0% | |
GCATCTTGGTCTGGGCTTAC+TGG | + | tig0022001:17328-17347 | Msa1396100:CDS | 55.0% | |
GGCATCCCAAGGACTTCATG+TGG | - | tig0022001:17647-17666 | None:intergenic | 55.0% | |
TATCACATCCAAGAGCGGGG+TGG | - | tig0022001:18348-18367 | None:intergenic | 55.0% | |
CTCGGAGAGGTGAATGTGGA+GGG | - | tig0022001:18449-18468 | None:intergenic | 55.0% | |
TGTCCTCGGAGAGGTGAATG+TGG | - | tig0022001:18453-18472 | None:intergenic | 55.0% | |
GGTTCCATATGTCCTCGGAG+AGG | - | tig0022001:18462-18481 | None:intergenic | 55.0% | |
GCCTGCTTTGTCCCCAACAA+TGG | + | tig0022001:20566-20585 | Msa1396100:CDS | 55.0% | |
ATGCTGCCTGCTCTTTCGCA+AGG | + | tig0022001:21658-21677 | Msa1396100:intron | 55.0% | |
TCGGTTGCTCAGCACCTTCT+GGG | - | tig0022001:22988-23007 | None:intergenic | 55.0% | |
CCCCGAGCTTCATAACCATG+TGG | + | tig0022001:23175-23194 | Msa1396100:intron | 55.0% | |
CCAACAGCCTTCTAGCCACA+TGG | - | tig0022001:23193-23212 | None:intergenic | 55.0% | |
CCATGTGGCTAGAAGGCTGT+TGG | + | tig0022001:23190-23209 | Msa1396100:intron | 55.0% | |
GCAATTAAGGCGGCTGGAAG+TGG | - | tig0022001:23714-23733 | None:intergenic | 55.0% | |
GTAACCGCAATTAAGGCGGC+TGG | - | tig0022001:23720-23739 | None:intergenic | 55.0% | |
GCAAGGGGTTGTACAAAGCC+CGG | - | tig0022001:24559-24578 | None:intergenic | 55.0% | |
GAGAGAGAGAGAACCTGTGG+GGG | - | tig0022001:24636-24655 | None:intergenic | 55.0% | |
! | AACGAAGGGGCCAAGTATCG+TGG | + | tig0022001:25565-25584 | Msa1396100:intron | 55.0% |
!! | TTTCCAATCCCTTTGGGGCC+TGG | + | tig0022001:25819-25838 | Msa1396100:intron | 55.0% |
AATCCAGGCCCCAAAGGGAT+TGG | - | tig0022001:25825-25844 | None:intergenic | 55.0% | |
CAGGCTTGCATTCTTGCCGT+AGG | + | tig0022001:25915-25934 | Msa1396100:intron | 55.0% | |
TGCATTCTTGCCGTAGGGAG+AGG | + | tig0022001:25921-25940 | Msa1396100:CDS | 55.0% | |
GCCGATCAACGCGTCTTTGA+TGG | + | tig0022001:26104-26123 | Msa1396100:CDS | 55.0% | |
TGCAACTCCAAGCCAGGTTG+TGG | - | tig0022001:26760-26779 | None:intergenic | 55.0% | |
AGAACATGCCACCCCGCTCT+TGG | + | tig0022001:18337-18356 | Msa1396100:intron | 60.0% | |
CCTCGGAGAGGTGAATGTGG+AGG | - | tig0022001:18450-18469 | None:intergenic | 60.0% | |
CCTCCACATTCACCTCTCCG+AGG | + | tig0022001:18447-18466 | Msa1396100:intron | 60.0% | |
GTTGTTGCTGCACCACCACC+TGG | - | tig0022001:18996-19015 | None:intergenic | 60.0% | |
ACACCAGGATGCCGCAGTTG+AGG | + | tig0022001:20476-20495 | Msa1396100:CDS | 60.0% | |
TCTCCTCAACTGCGGCATCC+TGG | - | tig0022001:20482-20501 | None:intergenic | 60.0% | |
!! | CCTTTCAGTAGGGTGCCGTG+AGG | - | tig0022001:21881-21900 | None:intergenic | 60.0% |
CCTCACGGCACCCTACTGAA+AGG | + | tig0022001:21878-21897 | Msa1396100:CDS | 60.0% | |
!! | CTAGTGGTGACGGACCCAGA+AGG | + | tig0022001:22971-22990 | Msa1396100:intron | 60.0% |
GTCGGTTGCTCAGCACCTTC+TGG | - | tig0022001:22989-23008 | None:intergenic | 60.0% | |
! | GGTGCTGGAGGCTGCGATAA+AGG | - | tig0022001:23752-23771 | None:intergenic | 60.0% |
CTCTCACCCCCCACAGAAGC+AGG | - | tig0022001:20432-20451 | None:intergenic | 65.0% | |
GCTTCTGTGGGGGGTGAGAG+CGG | + | tig0022001:20432-20451 | Msa1396100:CDS | 65.0% | |
CTTCTGTGGGGGGTGAGAGC+GGG | + | tig0022001:20433-20452 | Msa1396100:CDS | 65.0% | |
TTCTGTGGGGGGTGAGAGCG+GGG | + | tig0022001:20434-20453 | Msa1396100:CDS | 65.0% | |
ACTGCGGCATCCTGGTGTGC+TGG | - | tig0022001:20474-20493 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0022001 | gene | 15729 | 27061 | 15729 | ID=Msa1396100;Name=Msa1396100 |
tig0022001 | mRNA | 15729 | 27061 | 15729 | ID=Msa1396100-mRNA-1;Parent=Msa1396100;Name=Msa1396100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=128|1|1|1|0.95|1|23|370|626 |
tig0022001 | exon | 15729 | 15936 | 15729 | ID=Msa1396100-mRNA-1:exon:15309;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 17038 | 17085 | 17038 | ID=Msa1396100-mRNA-1:exon:15310;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 17324 | 17378 | 17324 | ID=Msa1396100-mRNA-1:exon:15311;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 17456 | 17486 | 17456 | ID=Msa1396100-mRNA-1:exon:15312;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 17639 | 17685 | 17639 | ID=Msa1396100-mRNA-1:exon:15313;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 17780 | 17824 | 17780 | ID=Msa1396100-mRNA-1:exon:15314;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 17966 | 18039 | 17966 | ID=Msa1396100-mRNA-1:exon:15315;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 19793 | 19862 | 19793 | ID=Msa1396100-mRNA-1:exon:15316;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 20399 | 20587 | 20399 | ID=Msa1396100-mRNA-1:exon:15317;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 20672 | 20716 | 20672 | ID=Msa1396100-mRNA-1:exon:15318;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 20865 | 20938 | 20865 | ID=Msa1396100-mRNA-1:exon:15319;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 21400 | 21469 | 21400 | ID=Msa1396100-mRNA-1:exon:15320;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 21680 | 22069 | 21680 | ID=Msa1396100-mRNA-1:exon:15321;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 22520 | 22580 | 22520 | ID=Msa1396100-mRNA-1:exon:15322;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 22671 | 22715 | 22671 | ID=Msa1396100-mRNA-1:exon:15323;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 22818 | 22901 | 22818 | ID=Msa1396100-mRNA-1:exon:15324;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 24038 | 24114 | 24038 | ID=Msa1396100-mRNA-1:exon:15325;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 24227 | 24289 | 24227 | ID=Msa1396100-mRNA-1:exon:15326;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 24400 | 24470 | 24400 | ID=Msa1396100-mRNA-1:exon:15327;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 24581 | 24641 | 24581 | ID=Msa1396100-mRNA-1:exon:15328;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 25918 | 25978 | 25918 | ID=Msa1396100-mRNA-1:exon:15329;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 26057 | 26137 | 26057 | ID=Msa1396100-mRNA-1:exon:15330;Parent=Msa1396100-mRNA-1 |
tig0022001 | exon | 26633 | 27061 | 26633 | ID=Msa1396100-mRNA-1:exon:15331;Parent=Msa1396100-mRNA-1 |
tig0022001 | five_prime_UTR | 15729 | 15856 | 15729 | ID=Msa1396100-mRNA-1:five_prime_utr;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 15857 | 15936 | 15857 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 17038 | 17085 | 17038 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 17324 | 17378 | 17324 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 17456 | 17486 | 17456 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 17639 | 17685 | 17639 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 17780 | 17824 | 17780 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 17966 | 18039 | 17966 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 19793 | 19862 | 19793 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 20399 | 20587 | 20399 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 20672 | 20716 | 20672 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 20865 | 20938 | 20865 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 21400 | 21469 | 21400 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 21680 | 22069 | 21680 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 22520 | 22580 | 22520 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 22671 | 22715 | 22671 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 22818 | 22901 | 22818 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 24038 | 24114 | 24038 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 24227 | 24289 | 24227 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 24400 | 24470 | 24400 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 24581 | 24641 | 24581 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 25918 | 25978 | 25918 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 26057 | 26137 | 26057 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | CDS | 26633 | 26691 | 26633 | ID=Msa1396100-mRNA-1:cds;Parent=Msa1396100-mRNA-1 |
tig0022001 | three_prime_UTR | 26692 | 27061 | 26692 | ID=Msa1396100-mRNA-1:three_prime_utr;Parent=Msa1396100-mRNA-1 |
Gene Sequence |
Protein sequence |