Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158690 | XP_003624633.1 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158690 | sp|P28752|TBA1_ORYSJ | 93.333 | 450 | 30 | 0 | 1 | 450 | 1 | 450 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158690 | A2Q5W0 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1118740 | Msa1158690 | 0.940805 | 1.244240e-100 | -8.615850e-47 |
| Msa1158690 | Msa1368100 | 0.999025 | 1.508116e-286 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158690 | MtrunA17_Chr7g0253411 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Msa1158690 | MtrunA17_Chr8g0378821 | 94.713 | 435 | 23 | 0 | 1 | 435 | 1 | 435 | 0.0 | 847 |
| Msa1158690 | MtrunA17_Chr1g0206881 | 89.778 | 450 | 46 | 0 | 1 | 450 | 1 | 450 | 0.0 | 831 |
| Msa1158690 | MtrunA17_Chr3g0140821 | 91.324 | 438 | 38 | 0 | 1 | 438 | 1 | 438 | 0.0 | 823 |
| Msa1158690 | MtrunA17_Chr4g0054511 | 90.888 | 439 | 40 | 0 | 1 | 439 | 1 | 439 | 0.0 | 822 |
| Msa1158690 | MtrunA17_Chr6g0461281 | 87.361 | 451 | 53 | 2 | 1 | 450 | 1 | 448 | 0.0 | 799 |
| Msa1158690 | MtrunA17_Chr2g0300491 | 68.282 | 454 | 133 | 3 | 1 | 448 | 1 | 449 | 0.0 | 622 |
| Msa1158690 | MtrunA17_Chr2g0300671 | 70.737 | 434 | 122 | 2 | 1 | 434 | 1 | 429 | 0.0 | 621 |
| Msa1158690 | MtrunA17_Chr4g0051631 | 41.244 | 434 | 245 | 3 | 1 | 434 | 1 | 424 | 5.14e-124 | 367 |
| Msa1158690 | MtrunA17_Chr4g0008361 | 41.475 | 434 | 244 | 3 | 1 | 434 | 1 | 424 | 2.22e-123 | 366 |
| Msa1158690 | MtrunA17_Chr4g0008401 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 3.82e-123 | 365 |
| Msa1158690 | MtrunA17_Chr7g0255791 | 40.553 | 434 | 248 | 3 | 1 | 434 | 1 | 424 | 1.33e-122 | 364 |
| Msa1158690 | MtrunA17_Chr2g0292921 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 1.39e-122 | 364 |
| Msa1158690 | MtrunA17_Chr4g0007371 | 40.596 | 436 | 247 | 3 | 1 | 434 | 1 | 426 | 2.41e-122 | 363 |
| Msa1158690 | MtrunA17_Chr1g0203181 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 2.41e-122 | 363 |
| Msa1158690 | MtrunA17_Chr8g0393021 | 40.222 | 450 | 257 | 3 | 1 | 450 | 1 | 438 | 2.64e-122 | 363 |
| Msa1158690 | MtrunA17_Chr3g0142731 | 39.401 | 434 | 255 | 1 | 1 | 434 | 1 | 426 | 2.87e-122 | 363 |
| Msa1158690 | MtrunA17_Chr8g0386781 | 38.902 | 437 | 251 | 3 | 1 | 434 | 1 | 424 | 3.27e-121 | 360 |
| Msa1158690 | MtrunA17_Chr3g0109241 | 87.681 | 138 | 17 | 0 | 268 | 405 | 1 | 138 | 9.10e-89 | 267 |
| Msa1158690 | MtrunA17_Chr7g0275431 | 31.461 | 445 | 284 | 8 | 2 | 433 | 3 | 439 | 2.79e-79 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158690 | AT5G19780.1 | 94.943 | 435 | 22 | 0 | 1 | 435 | 1 | 435 | 0.0 | 848 |
| Msa1158690 | AT5G19770.1 | 94.943 | 435 | 22 | 0 | 1 | 435 | 1 | 435 | 0.0 | 848 |
| Msa1158690 | AT1G64740.1 | 91.954 | 435 | 35 | 0 | 1 | 435 | 1 | 435 | 0.0 | 825 |
| Msa1158690 | AT1G50010.1 | 90.575 | 435 | 41 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa1158690 | AT1G04820.1 | 90.575 | 435 | 41 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa1158690 | AT4G14960.2 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 811 |
| Msa1158690 | AT4G14960.1 | 85.504 | 407 | 52 | 1 | 1 | 407 | 1 | 400 | 0.0 | 711 |
| Msa1158690 | AT1G75780.1 | 40.553 | 434 | 249 | 2 | 1 | 434 | 1 | 425 | 1.54e-125 | 372 |
| Msa1158690 | AT5G62690.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.19e-123 | 367 |
| Msa1158690 | AT5G62700.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.19e-123 | 367 |
| Msa1158690 | AT1G20010.1 | 40.323 | 434 | 250 | 2 | 1 | 434 | 1 | 425 | 1.71e-123 | 367 |
| Msa1158690 | AT5G12250.1 | 40.783 | 434 | 247 | 3 | 1 | 434 | 1 | 424 | 2.24e-123 | 366 |
| Msa1158690 | AT2G29550.1 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 1.19e-122 | 365 |
| Msa1158690 | AT4G20890.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.55e-122 | 364 |
| Msa1158690 | AT5G23860.2 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 3.02e-122 | 363 |
| Msa1158690 | AT5G23860.1 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 3.02e-122 | 363 |
| Msa1158690 | AT5G44340.1 | 40.783 | 434 | 247 | 4 | 1 | 434 | 1 | 424 | 7.98e-120 | 357 |
| Msa1158690 | AT5G05620.1 | 32.135 | 445 | 281 | 8 | 2 | 433 | 3 | 439 | 4.28e-80 | 256 |
| Msa1158690 | AT3G61650.1 | 31.685 | 445 | 283 | 8 | 2 | 433 | 3 | 439 | 6.10e-79 | 253 |
Find 113 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTGAGCAGTTAATTTC+TGG | 0.179011 | 7_4:+48109108 | Msa1158690:CDS |
| GAAAGGTTGTCTGTCGATTA+TGG | 0.254191 | 7_4:+48109394 | Msa1158690:CDS |
| CACTGATGTGGTTGTACTTT+TGG | 0.262817 | 7_4:+48109858 | Msa1158690:CDS |
| GGAGGTACAGGTTCTGGTTT+GGG | 0.273144 | 7_4:+48109358 | Msa1158690:CDS |
| TCTGCTCTGCCTGTTGTATC+TGG | 0.273590 | 7_4:+48111003 | Msa1158690:three_prime_UTR |
| TGCTAAGCTCTTCTATGTTT+TGG | 0.274209 | 7_4:+48111077 | Msa1158690:three_prime_UTR |
| TGGAGGTACAGGTTCTGGTT+TGG | 0.346982 | 7_4:+48109357 | Msa1158690:CDS |
| TGGTTTGGGATCGTTACTTT+TGG | 0.354669 | 7_4:+48109372 | Msa1158690:CDS |
| GCCTTTGCAGAGGATATTAC+AGG | 0.357050 | 7_4:-48110087 | None:intergenic |
| GTTGGTGGAGGTACAGGTTC+TGG | 0.360484 | 7_4:+48109352 | Msa1158690:CDS |
| AAGGGCCTTATTTGTTGATC+TGG | 0.363705 | 7_4:+48109035 | Msa1158690:CDS |
| CGGTTCCAGATCAACAAATA+AGG | 0.370493 | 7_4:-48109040 | None:intergenic |
| AATGCTGTTGGTGGAGGTAC+AGG | 0.403277 | 7_4:+48109346 | Msa1158690:CDS |
| TTGCCAGAAATTAACTGCTC+AGG | 0.405472 | 7_4:-48109111 | None:intergenic |
| ACAGCTGCATTTACATCTTT+AGG | 0.409495 | 7_4:-48110240 | None:intergenic |
| GATATGGAACCAGGTTAGTC+TGG | 0.415527 | 7_4:-48110032 | None:intergenic |
| GAGATAATAAGTATTCATAT+TGG | 0.417940 | 7_4:+48107973 | Msa1158690:CDS |
| ATGAAATGGATACGAGGATA+TGG | 0.420479 | 7_4:-48110048 | None:intergenic |
| TACCATCTATCCTTCTCCTC+AGG | 0.422942 | 7_4:+48109438 | Msa1158690:CDS |
| AACACCTTCTTCAGTGAGAC+TGG | 0.429484 | 7_4:+48108994 | Msa1158690:CDS |
| TGGTATCTTCTCCGCGCAAT+TGG | 0.449021 | 7_4:+48111108 | Msa1158690:three_prime_UTR |
| CACTTAGCCATCATACTTGA+CGG | 0.450335 | 7_4:-48110159 | None:intergenic |
| TTCTTCAGTGAGACTGGATC+TGG | 0.452584 | 7_4:+48109000 | Msa1158690:CDS |
| AAAACTGCGTTGGTGATCTC+AGG | 0.454547 | 7_4:-48110132 | None:intergenic |
| AGAAACTAATTCCTTGAGTT+GGG | 0.456285 | 7_4:+48111131 | Msa1158690:three_prime_UTR |
| GAGAAACTAATTCCTTGAGT+TGG | 0.457859 | 7_4:+48111130 | Msa1158690:three_prime_UTR |
| CATAAGACGAAAGCATGAAA+TGG | 0.468504 | 7_4:-48110062 | None:intergenic |
| AGTATTCATATTGGACAAGC+TGG | 0.473365 | 7_4:+48107982 | Msa1158690:CDS |
| TTGATCTCATGTATGCTAAG+AGG | 0.486229 | 7_4:+48110790 | Msa1158690:CDS |
| CTGGTACCACTGTTGGAGGC+TGG | 0.486551 | 7_4:-48110677 | None:intergenic |
| TCAAGTGGGGAATTCATGTT+GGG | 0.495335 | 7_4:+48108008 | Msa1158690:CDS |
| TTCAAGTGGGGAATTCATGT+TGG | 0.496744 | 7_4:+48108007 | Msa1158690:CDS |
| GATGATGAAGGAATGATGAT+AGG | 0.500017 | 7_4:-48110962 | None:intergenic |
| GTTATCGATGAAGTAAGAAC+TGG | 0.501415 | 7_4:+48109066 | Msa1158690:CDS |
| CATTGCAGTGATACCTCACC+TGG | 0.502593 | 7_4:+48108952 | Msa1158690:intron |
| CGGTTCAAGTTGGTATAAGT+TGG | 0.505038 | 7_4:-48109931 | None:intergenic |
| TACCTGAGGAGAAGGATAGA+TGG | 0.505051 | 7_4:-48109440 | None:intergenic |
| TACCTAGGCATCAATCCATC+AGG | 0.509994 | 7_4:-48108060 | None:intergenic |
| CTTCCTTGACAACTTCCTTG+AGG | 0.511080 | 7_4:+48109974 | Msa1158690:CDS |
| GCATTTGTACATTGGTATGT+TGG | 0.511829 | 7_4:+48110813 | Msa1158690:CDS |
| TCGCCTCCTGGTACCACTGT+TGG | 0.512189 | 7_4:-48110684 | None:intergenic |
| ATTACACAGCCAGATACAAC+AGG | 0.516662 | 7_4:-48111012 | None:intergenic |
| ACAACTTCCTTGAGGTTCGA+CGG | 0.518234 | 7_4:+48109982 | Msa1158690:CDS |
| GAACAGTTCAGTTTGTTGAC+TGG | 0.519065 | 7_4:+48110283 | Msa1158690:CDS |
| TCCCCTTGCAAAATTATTAG+CGG | 0.522098 | 7_4:-48109142 | None:intergenic |
| GACAATTGCACTGGATTGCA+AGG | 0.523031 | 7_4:+48109310 | Msa1158690:CDS |
| ATTCCACACTTGAAACCAGT+TGG | 0.524605 | 7_4:-48110648 | None:intergenic |
| CCTCCTGGTACCACTGTTGG+AGG | 0.526246 | 7_4:-48110681 | None:intergenic |
| CTAAGAGGGCATTTGTACAT+TGG | 0.526456 | 7_4:+48110805 | Msa1158690:CDS |
| AACCTGATGGATTGATGCCT+AGG | 0.533197 | 7_4:+48108058 | Msa1158690:CDS |
| GTGGAAAGAACACTGTTGTA+AGG | 0.534161 | 7_4:-48109817 | None:intergenic |
| AAAGCATCGTGTGCTACGCC+AGG | 0.534949 | 7_4:-48108970 | None:intergenic |
| TGATCTCATGTATGCTAAGA+GGG | 0.535385 | 7_4:+48110791 | Msa1158690:CDS |
| ACAGGAGGTGATGATGATGA+AGG | 0.536884 | 7_4:-48110974 | None:intergenic |
| AGATCCAGTCTCACTGAAGA+AGG | 0.536937 | 7_4:-48108998 | None:intergenic |
| GAGCTTTATTGTCTTGAGCA+TGG | 0.539665 | 7_4:+48108030 | Msa1158690:CDS |
| AGGCAGAGCAGAACAAAGAC+AGG | 0.539669 | 7_4:-48110992 | None:intergenic |
| AAATTAGCAGACAATTGCAC+TGG | 0.540742 | 7_4:+48109301 | Msa1158690:CDS |
| TGCCAGAAATTAACTGCTCA+GGG | 0.544963 | 7_4:-48109110 | None:intergenic |
| AATTGCGCGGAGAAGATACC+AGG | 0.545807 | 7_4:-48111106 | None:intergenic |
| CAGCCTCCAACAGTGGTACC+AGG | 0.546341 | 7_4:+48110678 | Msa1158690:CDS |
| AGAAATCAAACGGTTCAAGT+TGG | 0.546872 | 7_4:-48109941 | None:intergenic |
| TATGAAGAAGTTGGAGCTGA+AGG | 0.548058 | 7_4:+48110900 | Msa1158690:CDS |
| TCTTCTTGAGCACACTGATG+TGG | 0.548393 | 7_4:+48109846 | Msa1158690:CDS |
| AAGAGCAGCAAGATCCTCCC+TGG | 0.548874 | 7_4:-48110868 | None:intergenic |
| GTTGGAGCTGAAGGTGAAGC+TGG | 0.550120 | 7_4:+48110909 | Msa1158690:CDS |
| ATTCTTAATACCTGAGGAGA+AGG | 0.552200 | 7_4:-48109448 | None:intergenic |
| TCCTAGACACGGAAAGTACA+TGG | 0.554265 | 7_4:+48110185 | Msa1158690:CDS |
| AGATAACTTGAGAAATCAAA+CGG | 0.555063 | 7_4:-48109951 | None:intergenic |
| GATTGCACCGTCGAACCTCA+AGG | 0.556970 | 7_4:-48109989 | None:intergenic |
| CCTTTGCAGAGGATATTACA+GGG | 0.558058 | 7_4:-48110086 | None:intergenic |
| ACCTTCGCAAGATCGCCTCC+TGG | 0.558416 | 7_4:-48110696 | None:intergenic |
| TTGGTATGTTGGTGAAGGAA+TGG | 0.563208 | 7_4:+48110824 | Msa1158690:CDS |
| CAACAACACAGCTGTTTCCG+AGG | 0.568785 | 7_4:+48110743 | Msa1158690:CDS |
| TGAGCAGTTAATTTCTGGCA+AGG | 0.570785 | 7_4:+48109113 | Msa1158690:CDS |
| GCCATGTACTTTCCGTGTCT+AGG | 0.570873 | 7_4:-48110186 | None:intergenic |
| AGATCAACAAATAAGGCCCT+TGG | 0.576663 | 7_4:-48109033 | None:intergenic |
| CTTACTTCATCGATAACAGT+CGG | 0.579173 | 7_4:-48109060 | None:intergenic |
| TACTGAATTCCAGACTAACC+TGG | 0.579785 | 7_4:+48110023 | Msa1158690:CDS |
| CAGGAACTGATATCTGCTCA+TGG | 0.588381 | 7_4:-48110113 | None:intergenic |
| TGTCCAACTGGTTTCAAGTG+TGG | 0.589380 | 7_4:+48110645 | Msa1158690:CDS |
| GAGCATGGAATTCAACCTGA+TGG | 0.591414 | 7_4:+48108045 | Msa1158690:CDS |
| GTACATTGGTATGTTGGTGA+AGG | 0.591423 | 7_4:+48110819 | Msa1158690:CDS |
| GGACAAGCTGGAATTCAAGT+GGG | 0.593353 | 7_4:+48107994 | Msa1158690:CDS |
| GGATACGAGGATATGGAACC+AGG | 0.594253 | 7_4:-48110041 | None:intergenic |
| GTGCTCAAGAAGAGAATGAG+TGG | 0.604916 | 7_4:-48109836 | None:intergenic |
| TTTGCAAGGGGACACTACAC+CGG | 0.607003 | 7_4:+48109153 | Msa1158690:CDS |
| ACACAATACTACCCAACTCA+AGG | 0.608631 | 7_4:-48111142 | None:intergenic |
| ATCTGGCAAGCATGTACCAA+GGG | 0.610864 | 7_4:+48109017 | Msa1158690:CDS |
| CCCTGTAATATCCTCTGCAA+AGG | 0.611099 | 7_4:+48110086 | Msa1158690:CDS |
| ACCAGGAGGCGATCTTGCGA+AGG | 0.611647 | 7_4:+48110695 | Msa1158690:CDS |
| TGGACAAGCTGGAATTCAAG+TGG | 0.612580 | 7_4:+48107993 | Msa1158690:CDS |
| GAACCTCAAGGAAGTTGTCA+AGG | 0.614211 | 7_4:-48109977 | None:intergenic |
| CAACTACCAGCCTCCAACAG+TGG | 0.617772 | 7_4:+48110671 | Msa1158690:CDS |
| GTTGGTGAAGGAATGGAAGA+AGG | 0.620831 | 7_4:+48110831 | Msa1158690:CDS |
| CAGAGCAGAACAAAGACAGG+AGG | 0.630707 | 7_4:-48110989 | None:intergenic |
| AATTAGTTTCTCCAATTGCG+CGG | 0.631786 | 7_4:-48111119 | None:intergenic |
| ATCGTGTGCTACGCCAGGTG+AGG | 0.633117 | 7_4:-48108965 | None:intergenic |
| AACTGATATCTGCTCATGGT+AGG | 0.635921 | 7_4:-48110109 | None:intergenic |
| CAAGGAGGAAGAAACTGCAA+AGG | 0.646845 | 7_4:-48107917 | None:intergenic |
| TGCTGCAAATGAAAATCACA+AGG | 0.653931 | 7_4:-48107935 | None:intergenic |
| CAACATCTCCGCGATACATG+AGG | 0.654917 | 7_4:-48110215 | None:intergenic |
| GACAAGCTGGAATTCAAGTG+GGG | 0.670284 | 7_4:+48107995 | Msa1158690:CDS |
| GATCTGGCAAGCATGTACCA+AGG | 0.671782 | 7_4:+48109016 | Msa1158690:CDS |
| CTCATGGTAGGCCTTTGCAG+AGG | 0.677206 | 7_4:-48110097 | None:intergenic |
| GCATGCTGCCTCATGTATCG+CGG | 0.677664 | 7_4:+48110207 | Msa1158690:CDS |
| ATCAATGCGAGAGAAAACCT+CGG | 0.683525 | 7_4:-48110760 | None:intergenic |
| CTTTGCAGAGGATATTACAG+GGG | 0.699325 | 7_4:-48110085 | None:intergenic |
| CCTCCAACAGTGGTACCAGG+AGG | 0.717379 | 7_4:+48110681 | Msa1158690:CDS |
| GTTCGACGGTGCAATCAACG+TGG | 0.720350 | 7_4:+48109996 | Msa1158690:CDS |
| GAAAGCATGAAATGGATACG+AGG | 0.722207 | 7_4:-48110054 | None:intergenic |
| GCTAAGTGTGATCCTAGACA+CGG | 0.723184 | 7_4:+48110174 | Msa1158690:CDS |
| TGCAAATGAAAATCACAAGG+AGG | 0.735187 | 7_4:-48107932 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGGAAATATATAAAATTTT+AGG | - | chr7_4:48108292-48108311 | None:intergenic | 10.0% |
| !! | TATATATCCAAATTAAAAAT+GGG | - | chr7_4:48108512-48108531 | None:intergenic | 10.0% |
| !! | TTATATATCCAAATTAAAAA+TGG | - | chr7_4:48108513-48108532 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGGATATATAAA+AGG | + | chr7_4:48108514-48108533 | Msa1158690:intron | 10.0% |
| !! | AAATCCTAATATATATTATT+CGG | - | chr7_4:48109740-48109759 | None:intergenic | 10.0% |
| !! | TAATCCGAATAATATATATT+AGG | + | chr7_4:48109733-48109752 | Msa1158690:intron | 15.0% |
| !! | AAAAATCATTAGATATAGAA+AGG | + | chr7_4:48109908-48109927 | Msa1158690:CDS | 15.0% |
| !! | GAGATAATAAGTATTCATAT+TGG | + | chr7_4:48107973-48107992 | Msa1158690:CDS | 20.0% |
| !! | TCATAAATAGTTGACATATA+TGG | + | chr7_4:48108462-48108481 | Msa1158690:intron | 20.0% |
| !! | GTTGATCTTAAATTAGTATA+AGG | + | chr7_4:48108484-48108503 | Msa1158690:intron | 20.0% |
| !! | ATATATATTATGTAGACCAA+GGG | + | chr7_4:48108558-48108577 | Msa1158690:intron | 20.0% |
| !! | TGAGTTAACAAGTTTAATAA+TGG | - | chr7_4:48108735-48108754 | None:intergenic | 20.0% |
| !!! | ATTAAACTTGTTAACTCAAA+TGG | + | chr7_4:48108737-48108756 | Msa1158690:intron | 20.0% |
| !!! | TGGAATTTTTAACTCATATA+TGG | + | chr7_4:48108889-48108908 | Msa1158690:intron | 20.0% |
| !! | AATGTAACAAATAACAAAGT+AGG | - | chr7_4:48109514-48109533 | None:intergenic | 20.0% |
| !!! | AACAATACCTTTTAATATGT+AGG | + | chr7_4:48109774-48109793 | Msa1158690:intron | 20.0% |
| !!! | TATAATTGCTTTATTCTCAT+AGG | + | chr7_4:48110504-48110523 | Msa1158690:intron | 20.0% |
| !!! | ATAATTGCTTTATTCTCATA+GGG | + | chr7_4:48110505-48110524 | Msa1158690:intron | 20.0% |
| !!! | CAAACTGTTTTTTTAGTAAA+AGG | - | chr7_4:48110596-48110615 | None:intergenic | 20.0% |
| !! | AGAAACATTCTTAAAAATAG+TGG | - | chr7_4:48111051-48111070 | None:intergenic | 20.0% |
| !! | TCATATAAAAAAGTGTACCT+AGG | - | chr7_4:48108078-48108097 | None:intergenic | 25.0% |
| ! | CTTGTTTACATTAATTGTAG+TGG | + | chr7_4:48108119-48108138 | Msa1158690:intron | 25.0% |
| ! | AAAAATAGAAAAAACCCAGA+AGG | - | chr7_4:48108321-48108340 | None:intergenic | 25.0% |
| !!! | TTCTGGGTTTTTTCTATTTT+TGG | + | chr7_4:48108320-48108339 | Msa1158690:intron | 25.0% |
| !!! | ATTTTTGGTGTTTTCATTTG+TGG | + | chr7_4:48108335-48108354 | Msa1158690:intron | 25.0% |
| !!! | TTTTTGGTGTTTTCATTTGT+GGG | + | chr7_4:48108336-48108355 | Msa1158690:intron | 25.0% |
| !!! | CTATTTTTGCATGATAAGAA+TGG | - | chr7_4:48108441-48108460 | None:intergenic | 25.0% |
| !!! | TAAGGATCCCATTTTTAATT+TGG | + | chr7_4:48108502-48108521 | Msa1158690:intron | 25.0% |
| ! | GATATATATTATGTAGACCA+AGG | + | chr7_4:48108557-48108576 | Msa1158690:intron | 25.0% |
| !!! | ATGTTTCTAGTTTTCCAATT+TGG | - | chr7_4:48108654-48108673 | None:intergenic | 25.0% |
| ! | CAAATGGTTGATTAATGATT+AGG | + | chr7_4:48108753-48108772 | Msa1158690:intron | 25.0% |
| !!! | ATGATTGATTTTCTTGAGTT+TGG | + | chr7_4:48108831-48108850 | Msa1158690:intron | 25.0% |
| !!! | TTTGGACTTTTTAACTCATA+AGG | + | chr7_4:48108812-48108831 | Msa1158690:intron | 25.0% |
| !!! | AGGTTGATTTGTTTTATGTT+TGG | + | chr7_4:48108869-48108888 | Msa1158690:intron | 25.0% |
| ! | CATAGAATCACAAATATAAC+AGG | - | chr7_4:48109636-48109655 | None:intergenic | 25.0% |
| ! | GTAGATACCTACATATTAAA+AGG | - | chr7_4:48109784-48109803 | None:intergenic | 25.0% |
| ! | AGATAACTTGAGAAATCAAA+CGG | - | chr7_4:48109954-48109973 | None:intergenic | 25.0% |
| ! | TTCCTTGAAATATCACATTA+TGG | + | chr7_4:48110321-48110340 | Msa1158690:intron | 25.0% |
| ! | AACCATAATGTGATATTTCA+AGG | - | chr7_4:48110326-48110345 | None:intergenic | 25.0% |
| !! | TAATTGCTTTATTCTCATAG+GGG | + | chr7_4:48110506-48110525 | Msa1158690:intron | 25.0% |
| !!! | ACTGTTTTTTTAGTAAAAGG+CGG | - | chr7_4:48110593-48110612 | None:intergenic | 25.0% |
| !! | ACATTCTTAAAAATAGTGGA+GGG | - | chr7_4:48111047-48111066 | None:intergenic | 25.0% |
| ! | AACATTCTTAAAAATAGTGG+AGG | - | chr7_4:48111048-48111067 | None:intergenic | 25.0% |
| ! | ATGATGAAAAAAAATGGTCT+CGG | - | chr7_4:48111206-48111225 | None:intergenic | 25.0% |
| TATTTCCTAATAGTTCCTTC+TGG | + | chr7_4:48108303-48108322 | Msa1158690:intron | 30.0% | |
| ATTTCCTAATAGTTCCTTCT+GGG | + | chr7_4:48108304-48108323 | Msa1158690:intron | 30.0% | |
| ! | TTTTTGCATGATAAGAATGG+AGG | - | chr7_4:48108438-48108457 | None:intergenic | 30.0% |
| CTAGAAACATCTCTTCAATT+TGG | + | chr7_4:48108664-48108683 | Msa1158690:intron | 30.0% | |
| TAACTCATATATGGTTGATC+AGG | + | chr7_4:48108898-48108917 | Msa1158690:intron | 30.0% | |
| !!! | TTCACTTTTTAACTTGACAG+CGG | + | chr7_4:48109214-48109233 | Msa1158690:intron | 30.0% |
| ! | TGTCTGCTAATTTTCTGATA+CGG | - | chr7_4:48109294-48109313 | None:intergenic | 30.0% |
| !!! | TTCTTTGTTTTCAATGCTGT+TGG | + | chr7_4:48109334-48109353 | Msa1158690:CDS | 30.0% |
| TATGGCAAAAAGTCTAAACT+TGG | + | chr7_4:48109412-48109431 | Msa1158690:CDS | 30.0% | |
| CTGTATGCGTTAATAAATAG+AGG | - | chr7_4:48109681-48109700 | None:intergenic | 30.0% | |
| !! | TCTAGATAGTTTAACTTGCA+AGG | - | chr7_4:48110374-48110393 | None:intergenic | 30.0% |
| ! | AGTGCTGAAATTATGCAATT+TGG | + | chr7_4:48110402-48110421 | Msa1158690:intron | 30.0% |
| !! | TGATATTGGTGACTATTTTC+AGG | + | chr7_4:48110622-48110641 | Msa1158690:intron | 30.0% |
| ! | AATGGAAGAAGGTGAATTTT+CGG | + | chr7_4:48110842-48110861 | Msa1158690:CDS | 30.0% |
| GAAAAAGACTATGAAGAAGT+TGG | + | chr7_4:48110891-48110910 | Msa1158690:CDS | 30.0% | |
| ! | CATTCTTAAAAATAGTGGAG+GGG | - | chr7_4:48111046-48111065 | None:intergenic | 30.0% |
| AGAAACTAATTCCTTGAGTT+GGG | + | chr7_4:48111131-48111150 | Msa1158690:three_prime_UTR | 30.0% | |
| TGCAAATGAAAATCACAAGG+AGG | - | chr7_4:48107935-48107954 | None:intergenic | 35.0% | |
| TGCTGCAAATGAAAATCACA+AGG | - | chr7_4:48107938-48107957 | None:intergenic | 35.0% | |
| AGTATTCATATTGGACAAGC+TGG | + | chr7_4:48107982-48108001 | Msa1158690:CDS | 35.0% | |
| AAAACCCAGAAGGAACTATT+AGG | - | chr7_4:48108311-48108330 | None:intergenic | 35.0% | |
| CCAATTTGGCAATTCTCTAT+TGG | - | chr7_4:48108640-48108659 | None:intergenic | 35.0% | |
| CCAATAGAGAATTGCCAAAT+TGG | + | chr7_4:48108637-48108656 | Msa1158690:intron | 35.0% | |
| !!! | ATGCTGCTTTTCTTGATGTT+TGG | + | chr7_4:48108794-48108813 | Msa1158690:intron | 35.0% |
| CTTACTTCATCGATAACAGT+CGG | - | chr7_4:48109063-48109082 | None:intergenic | 35.0% | |
| GTTATCGATGAAGTAAGAAC+TGG | + | chr7_4:48109066-48109085 | Msa1158690:CDS | 35.0% | |
| ! | ATGCCGCTAATAATTTTGCA+AGG | + | chr7_4:48109139-48109158 | Msa1158690:CDS | 35.0% |
| ! | TGCCGCTAATAATTTTGCAA+GGG | + | chr7_4:48109140-48109159 | Msa1158690:CDS | 35.0% |
| TCCCCTTGCAAAATTATTAG+CGG | - | chr7_4:48109145-48109164 | None:intergenic | 35.0% | |
| AAATTAGCAGACAATTGCAC+TGG | + | chr7_4:48109301-48109320 | Msa1158690:CDS | 35.0% | |
| !! | TTTGTTTTCAATGCTGTTGG+TGG | + | chr7_4:48109337-48109356 | Msa1158690:CDS | 35.0% |
| ATTCTTAATACCTGAGGAGA+AGG | - | chr7_4:48109451-48109470 | None:intergenic | 35.0% | |
| GTCTTCATTCTTAATACCTG+AGG | - | chr7_4:48109457-48109476 | None:intergenic | 35.0% | |
| ATCTGTTCCACTCATTCATA+TGG | + | chr7_4:48109595-48109614 | Msa1158690:intron | 35.0% | |
| CCATAAACCATATGAATGAG+TGG | - | chr7_4:48109605-48109624 | None:intergenic | 35.0% | |
| CCACTCATTCATATGGTTTA+TGG | + | chr7_4:48109602-48109621 | Msa1158690:intron | 35.0% | |
| AGAAATCAAACGGTTCAAGT+TGG | - | chr7_4:48109944-48109963 | None:intergenic | 35.0% | |
| ATGAAATGGATACGAGGATA+TGG | - | chr7_4:48110051-48110070 | None:intergenic | 35.0% | |
| ! | CATAAGACGAAAGCATGAAA+TGG | - | chr7_4:48110065-48110084 | None:intergenic | 35.0% |
| ACAGCTGCATTTACATCTTT+AGG | - | chr7_4:48110243-48110262 | None:intergenic | 35.0% | |
| TTTAGTAAAAGGCGGAAGAA+TGG | - | chr7_4:48110585-48110604 | None:intergenic | 35.0% | |
| ACAGTTTGACTGAGTGATAT+TGG | + | chr7_4:48110608-48110627 | Msa1158690:intron | 35.0% | |
| TTGATCTCATGTATGCTAAG+AGG | + | chr7_4:48110790-48110809 | Msa1158690:CDS | 35.0% | |
| TGATCTCATGTATGCTAAGA+GGG | + | chr7_4:48110791-48110810 | Msa1158690:CDS | 35.0% | |
| GCATTTGTACATTGGTATGT+TGG | + | chr7_4:48110813-48110832 | Msa1158690:CDS | 35.0% | |
| GATGATGAAGGAATGATGAT+AGG | - | chr7_4:48110965-48110984 | None:intergenic | 35.0% | |
| ! | TGCTAAGCTCTTCTATGTTT+TGG | + | chr7_4:48111077-48111096 | Msa1158690:three_prime_UTR | 35.0% |
| !!! | TCTATGTTTTGGTGTAAACC+TGG | + | chr7_4:48111088-48111107 | Msa1158690:three_prime_UTR | 35.0% |
| ! | AATTAGTTTCTCCAATTGCG+CGG | - | chr7_4:48111122-48111141 | None:intergenic | 35.0% |
| GAGAAACTAATTCCTTGAGT+TGG | + | chr7_4:48111130-48111149 | Msa1158690:three_prime_UTR | 35.0% | |
| TTCAAGTGGGGAATTCATGT+TGG | + | chr7_4:48108007-48108026 | Msa1158690:CDS | 40.0% | |
| TCAAGTGGGGAATTCATGTT+GGG | + | chr7_4:48108008-48108027 | Msa1158690:CDS | 40.0% | |
| !! | GAGCTTTATTGTCTTGAGCA+TGG | + | chr7_4:48108030-48108049 | Msa1158690:CDS | 40.0% |
| !! | GTGGGTCTTTTGAAAGCTTT+TGG | + | chr7_4:48108354-48108373 | Msa1158690:intron | 40.0% |
| CCTTGAAGAATTGAATCCCT+TGG | - | chr7_4:48108577-48108596 | None:intergenic | 40.0% | |
| CCAAGGGATTCAATTCTTCA+AGG | + | chr7_4:48108574-48108593 | Msa1158690:intron | 40.0% | |
| AGGATACTGCTTGTAATGAG+TGG | + | chr7_4:48108594-48108613 | Msa1158690:intron | 40.0% | |
| AGATCAACAAATAAGGCCCT+TGG | - | chr7_4:48109036-48109055 | None:intergenic | 40.0% | |
| !! | AAGGGCCTTATTTGTTGATC+TGG | + | chr7_4:48109035-48109054 | Msa1158690:CDS | 40.0% |
| CGGTTCCAGATCAACAAATA+AGG | - | chr7_4:48109043-48109062 | None:intergenic | 40.0% | |
| TGCCAGAAATTAACTGCTCA+GGG | - | chr7_4:48109113-48109132 | None:intergenic | 40.0% | |
| TTGCCAGAAATTAACTGCTC+AGG | - | chr7_4:48109114-48109133 | None:intergenic | 40.0% | |
| !! | TGAGCAGTTAATTTCTGGCA+AGG | + | chr7_4:48109113-48109132 | Msa1158690:CDS | 40.0% |
| ! | GCCGCTAATAATTTTGCAAG+GGG | + | chr7_4:48109141-48109160 | Msa1158690:CDS | 40.0% |
| TGCGTTAGAAATTGCCTTAC+CGG | - | chr7_4:48109175-48109194 | None:intergenic | 40.0% | |
| ! | CTAATTTTCTGATACGGTCG+AGG | - | chr7_4:48109288-48109307 | None:intergenic | 40.0% |
| !! | TGGTTTGGGATCGTTACTTT+TGG | + | chr7_4:48109372-48109391 | Msa1158690:CDS | 40.0% |
| !!! | TGGGATCGTTACTTTTGGAA+AGG | + | chr7_4:48109377-48109396 | Msa1158690:CDS | 40.0% |
| ! | GAAAGGTTGTCTGTCGATTA+TGG | + | chr7_4:48109394-48109413 | Msa1158690:CDS | 40.0% |
| GTGGAAAGAACACTGTTGTA+AGG | - | chr7_4:48109820-48109839 | None:intergenic | 40.0% | |
| ! | CACTGATGTGGTTGTACTTT+TGG | + | chr7_4:48109858-48109877 | Msa1158690:CDS | 40.0% |
| !! | CGGTTCAAGTTGGTATAAGT+TGG | - | chr7_4:48109934-48109953 | None:intergenic | 40.0% |
| TACTGAATTCCAGACTAACC+TGG | + | chr7_4:48110023-48110042 | Msa1158690:CDS | 40.0% | |
| ! | GAAAGCATGAAATGGATACG+AGG | - | chr7_4:48110057-48110076 | None:intergenic | 40.0% |
| CTTTGCAGAGGATATTACAG+GGG | - | chr7_4:48110088-48110107 | None:intergenic | 40.0% | |
| CCTTTGCAGAGGATATTACA+GGG | - | chr7_4:48110089-48110108 | None:intergenic | 40.0% | |
| AACTGATATCTGCTCATGGT+AGG | - | chr7_4:48110112-48110131 | None:intergenic | 40.0% | |
| ! | TTTTGAGCCGTCAAGTATGA+TGG | + | chr7_4:48110152-48110171 | Msa1158690:CDS | 40.0% |
| CACTTAGCCATCATACTTGA+CGG | - | chr7_4:48110162-48110181 | None:intergenic | 40.0% | |
| !! | GAACAGTTCAGTTTGTTGAC+TGG | + | chr7_4:48110283-48110302 | Msa1158690:CDS | 40.0% |
| !!! | ACTATTTTCAGGTGTCCAAC+TGG | + | chr7_4:48110633-48110652 | Msa1158690:intron | 40.0% |
| ATTCCACACTTGAAACCAGT+TGG | - | chr7_4:48110651-48110670 | None:intergenic | 40.0% | |
| ATCAATGCGAGAGAAAACCT+CGG | - | chr7_4:48110763-48110782 | None:intergenic | 40.0% | |
| !! | CTAAGAGGGCATTTGTACAT+TGG | + | chr7_4:48110805-48110824 | Msa1158690:CDS | 40.0% |
| ! | GTACATTGGTATGTTGGTGA+AGG | + | chr7_4:48110819-48110838 | Msa1158690:CDS | 40.0% |
| ! | TTGGTATGTTGGTGAAGGAA+TGG | + | chr7_4:48110824-48110843 | Msa1158690:CDS | 40.0% |
| TATGAAGAAGTTGGAGCTGA+AGG | + | chr7_4:48110900-48110919 | Msa1158690:CDS | 40.0% | |
| ATTACACAGCCAGATACAAC+AGG | - | chr7_4:48111015-48111034 | None:intergenic | 40.0% | |
| ACACAATACTACCCAACTCA+AGG | - | chr7_4:48111145-48111164 | None:intergenic | 40.0% | |
| CAAGGAGGAAGAAACTGCAA+AGG | - | chr7_4:48107920-48107939 | None:intergenic | 45.0% | |
| TGGACAAGCTGGAATTCAAG+TGG | + | chr7_4:48107993-48108012 | Msa1158690:CDS | 45.0% | |
| GGACAAGCTGGAATTCAAGT+GGG | + | chr7_4:48107994-48108013 | Msa1158690:CDS | 45.0% | |
| GACAAGCTGGAATTCAAGTG+GGG | + | chr7_4:48107995-48108014 | Msa1158690:CDS | 45.0% | |
| GAGCATGGAATTCAACCTGA+TGG | + | chr7_4:48108045-48108064 | Msa1158690:CDS | 45.0% | |
| !! | AACCTGATGGATTGATGCCT+AGG | + | chr7_4:48108058-48108077 | Msa1158690:CDS | 45.0% |
| TACCTAGGCATCAATCCATC+AGG | - | chr7_4:48108063-48108082 | None:intergenic | 45.0% | |
| AACACCTTCTTCAGTGAGAC+TGG | + | chr7_4:48108994-48109013 | Msa1158690:CDS | 45.0% | |
| AGATCCAGTCTCACTGAAGA+AGG | - | chr7_4:48109001-48109020 | None:intergenic | 45.0% | |
| TTCTTCAGTGAGACTGGATC+TGG | + | chr7_4:48109000-48109019 | Msa1158690:CDS | 45.0% | |
| ATCTGGCAAGCATGTACCAA+GGG | + | chr7_4:48109017-48109036 | Msa1158690:CDS | 45.0% | |
| CACCCTGAGCAGTTAATTTC+TGG | + | chr7_4:48109108-48109127 | Msa1158690:CDS | 45.0% | |
| CTGCAGCACAGATACACAAA+TGG | - | chr7_4:48109240-48109259 | None:intergenic | 45.0% | |
| TTGTGTATCTGTGCTGCAGT+TGG | + | chr7_4:48109241-48109260 | Msa1158690:intron | 45.0% | |
| GACAATTGCACTGGATTGCA+AGG | + | chr7_4:48109310-48109329 | Msa1158690:CDS | 45.0% | |
| !! | GTTTTCAATGCTGTTGGTGG+AGG | + | chr7_4:48109340-48109359 | Msa1158690:CDS | 45.0% |
| TACCATCTATCCTTCTCCTC+AGG | + | chr7_4:48109438-48109457 | Msa1158690:CDS | 45.0% | |
| TACCTGAGGAGAAGGATAGA+TGG | - | chr7_4:48109443-48109462 | None:intergenic | 45.0% | |
| GTGCTCAAGAAGAGAATGAG+TGG | - | chr7_4:48109839-48109858 | None:intergenic | 45.0% | |
| TCTTCTTGAGCACACTGATG+TGG | + | chr7_4:48109846-48109865 | Msa1158690:CDS | 45.0% | |
| CTTCCTTGACAACTTCCTTG+AGG | + | chr7_4:48109974-48109993 | Msa1158690:CDS | 45.0% | |
| GAACCTCAAGGAAGTTGTCA+AGG | - | chr7_4:48109980-48109999 | None:intergenic | 45.0% | |
| ACAACTTCCTTGAGGTTCGA+CGG | + | chr7_4:48109982-48110001 | Msa1158690:CDS | 45.0% | |
| ! | GATATGGAACCAGGTTAGTC+TGG | - | chr7_4:48110035-48110054 | None:intergenic | 45.0% |
| CCCTGTAATATCCTCTGCAA+AGG | + | chr7_4:48110086-48110105 | Msa1158690:CDS | 45.0% | |
| GCCTTTGCAGAGGATATTAC+AGG | - | chr7_4:48110090-48110109 | None:intergenic | 45.0% | |
| CAGGAACTGATATCTGCTCA+TGG | - | chr7_4:48110116-48110135 | None:intergenic | 45.0% | |
| !! | AAAACTGCGTTGGTGATCTC+AGG | - | chr7_4:48110135-48110154 | None:intergenic | 45.0% |
| GCTAAGTGTGATCCTAGACA+CGG | + | chr7_4:48110174-48110193 | Msa1158690:CDS | 45.0% | |
| ! | TCCTAGACACGGAAAGTACA+TGG | + | chr7_4:48110185-48110204 | Msa1158690:CDS | 45.0% |
| ! | TGTCCAACTGGTTTCAAGTG+TGG | + | chr7_4:48110645-48110664 | Msa1158690:CDS | 45.0% |
| ! | GTTGGTGAAGGAATGGAAGA+AGG | + | chr7_4:48110831-48110850 | Msa1158690:CDS | 45.0% |
| ! | AAGGTGAATTTTCGGAAGCC+AGG | + | chr7_4:48110850-48110869 | Msa1158690:CDS | 45.0% |
| ! | AGGTGAATTTTCGGAAGCCA+GGG | + | chr7_4:48110851-48110870 | Msa1158690:CDS | 45.0% |
| ! | ACAGGAGGTGATGATGATGA+AGG | - | chr7_4:48110977-48110996 | None:intergenic | 45.0% |
| CATTGCAGTGATACCTCACC+TGG | + | chr7_4:48108952-48108971 | Msa1158690:intron | 50.0% | |
| GATCTGGCAAGCATGTACCA+AGG | + | chr7_4:48109016-48109035 | Msa1158690:CDS | 50.0% | |
| TTTGCAAGGGGACACTACAC+CGG | + | chr7_4:48109153-48109172 | Msa1158690:CDS | 50.0% | |
| ! | AATGCTGTTGGTGGAGGTAC+AGG | + | chr7_4:48109346-48109365 | Msa1158690:CDS | 50.0% |
| ! | TGGAGGTACAGGTTCTGGTT+TGG | + | chr7_4:48109357-48109376 | Msa1158690:CDS | 50.0% |
| !! | GGAGGTACAGGTTCTGGTTT+GGG | + | chr7_4:48109358-48109377 | Msa1158690:CDS | 50.0% |
| GGATACGAGGATATGGAACC+AGG | - | chr7_4:48110044-48110063 | None:intergenic | 50.0% | |
| TGACGGCTCAAAAACTGCGT+TGG | - | chr7_4:48110145-48110164 | None:intergenic | 50.0% | |
| GCCATGTACTTTCCGTGTCT+AGG | - | chr7_4:48110189-48110208 | None:intergenic | 50.0% | |
| CAACATCTCCGCGATACATG+AGG | - | chr7_4:48110218-48110237 | None:intergenic | 50.0% | |
| TTCGCTTTGCGCTCATCACA+CGG | - | chr7_4:48110562-48110581 | None:intergenic | 50.0% | |
| ! | CAACAACACAGCTGTTTCCG+AGG | + | chr7_4:48110743-48110762 | Msa1158690:CDS | 50.0% |
| ! | TGAATTTTCGGAAGCCAGGG+AGG | + | chr7_4:48110854-48110873 | Msa1158690:CDS | 50.0% |
| CAGAGCAGAACAAAGACAGG+AGG | - | chr7_4:48110992-48111011 | None:intergenic | 50.0% | |
| AGGCAGAGCAGAACAAAGAC+AGG | - | chr7_4:48110995-48111014 | None:intergenic | 50.0% | |
| TCTGCTCTGCCTGTTGTATC+TGG | + | chr7_4:48111003-48111022 | Msa1158690:three_prime_UTR | 50.0% | |
| AATTGCGCGGAGAAGATACC+AGG | - | chr7_4:48111109-48111128 | None:intergenic | 50.0% | |
| TGGTATCTTCTCCGCGCAAT+TGG | + | chr7_4:48111108-48111127 | Msa1158690:three_prime_UTR | 50.0% | |
| !! | AAAGCATCGTGTGCTACGCC+AGG | - | chr7_4:48108973-48108992 | None:intergenic | 55.0% |
| AAGGGGACACTACACCGGTA+AGG | + | chr7_4:48109158-48109177 | Msa1158690:intron | 55.0% | |
| ! | GTTGGTGGAGGTACAGGTTC+TGG | + | chr7_4:48109352-48109371 | Msa1158690:CDS | 55.0% |
| GATTGCACCGTCGAACCTCA+AGG | - | chr7_4:48109992-48110011 | None:intergenic | 55.0% | |
| GTTCGACGGTGCAATCAACG+TGG | + | chr7_4:48109996-48110015 | Msa1158690:CDS | 55.0% | |
| CTCATGGTAGGCCTTTGCAG+AGG | - | chr7_4:48110100-48110119 | None:intergenic | 55.0% | |
| GCATGCTGCCTCATGTATCG+CGG | + | chr7_4:48110207-48110226 | Msa1158690:CDS | 55.0% | |
| CAACTACCAGCCTCCAACAG+TGG | + | chr7_4:48110671-48110690 | Msa1158690:CDS | 55.0% | |
| AAGAGCAGCAAGATCCTCCC+TGG | - | chr7_4:48110871-48110890 | None:intergenic | 55.0% | |
| GTTGGAGCTGAAGGTGAAGC+TGG | + | chr7_4:48110909-48110928 | Msa1158690:CDS | 55.0% | |
| ATCGTGTGCTACGCCAGGTG+AGG | - | chr7_4:48108968-48108987 | None:intergenic | 60.0% | |
| CTGGTACCACTGTTGGAGGC+TGG | - | chr7_4:48110680-48110699 | None:intergenic | 60.0% | |
| CAGCCTCCAACAGTGGTACC+AGG | + | chr7_4:48110678-48110697 | Msa1158690:CDS | 60.0% | |
| CCTCCTGGTACCACTGTTGG+AGG | - | chr7_4:48110684-48110703 | None:intergenic | 60.0% | |
| CCTCCAACAGTGGTACCAGG+AGG | + | chr7_4:48110681-48110700 | Msa1158690:CDS | 60.0% | |
| TCGCCTCCTGGTACCACTGT+TGG | - | chr7_4:48110687-48110706 | None:intergenic | 60.0% | |
| ACCAGGAGGCGATCTTGCGA+AGG | + | chr7_4:48110695-48110714 | Msa1158690:CDS | 60.0% | |
| ACCTTCGCAAGATCGCCTCC+TGG | - | chr7_4:48110699-48110718 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48107892 | 48111228 | 48107892 | ID=Msa1158690;Name=Msa1158690 |
| chr7_4 | mRNA | 48107892 | 48111228 | 48107892 | ID=Msa1158690-mRNA-1;Parent=Msa1158690;Name=Msa1158690-mRNA-1;_AED=0.01;_eAED=0.01;_QI=75|1|1|1|1|1|5|269|450 |
| chr7_4 | exon | 48107892 | 48108079 | 48107892 | ID=Msa1158690-mRNA-1:exon:12930;Parent=Msa1158690-mRNA-1 |
| chr7_4 | exon | 48108960 | 48109174 | 48108960 | ID=Msa1158690-mRNA-1:exon:12931;Parent=Msa1158690-mRNA-1 |
| chr7_4 | exon | 48109260 | 48109459 | 48109260 | ID=Msa1158690-mRNA-1:exon:12932;Parent=Msa1158690-mRNA-1 |
| chr7_4 | exon | 48109796 | 48110304 | 48109796 | ID=Msa1158690-mRNA-1:exon:12933;Parent=Msa1158690-mRNA-1 |
| chr7_4 | exon | 48110644 | 48111228 | 48110644 | ID=Msa1158690-mRNA-1:exon:12934;Parent=Msa1158690-mRNA-1 |
| chr7_4 | five_prime_UTR | 48107892 | 48107966 | 48107892 | ID=Msa1158690-mRNA-1:five_prime_utr;Parent=Msa1158690-mRNA-1 |
| chr7_4 | CDS | 48107967 | 48108079 | 48107967 | ID=Msa1158690-mRNA-1:cds;Parent=Msa1158690-mRNA-1 |
| chr7_4 | CDS | 48108960 | 48109174 | 48108960 | ID=Msa1158690-mRNA-1:cds;Parent=Msa1158690-mRNA-1 |
| chr7_4 | CDS | 48109260 | 48109459 | 48109260 | ID=Msa1158690-mRNA-1:cds;Parent=Msa1158690-mRNA-1 |
| chr7_4 | CDS | 48109796 | 48110304 | 48109796 | ID=Msa1158690-mRNA-1:cds;Parent=Msa1158690-mRNA-1 |
| chr7_4 | CDS | 48110644 | 48110959 | 48110644 | ID=Msa1158690-mRNA-1:cds;Parent=Msa1158690-mRNA-1 |
| chr7_4 | three_prime_UTR | 48110960 | 48111228 | 48110960 | ID=Msa1158690-mRNA-1:three_prime_utr;Parent=Msa1158690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
