Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118740 | XP_003624633.1 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118740 | sp|P28752|TBA1_ORYSJ | 93.333 | 450 | 30 | 0 | 1 | 450 | 1 | 450 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118740 | A2Q5W0 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0629030 | Msa1118740 | 0.814328 | 1.629657e-51 | -8.615850e-47 |
| Msa0666580 | Msa1118740 | 0.812198 | 4.782732e-51 | -8.615850e-47 |
| Msa1118740 | Msa1158690 | 0.940805 | 1.244240e-100 | -8.615850e-47 |
| Msa1118740 | Msa1368100 | 0.942862 | 3.380459e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118740 | MtrunA17_Chr7g0253411 | 99.113 | 451 | 3 | 1 | 1 | 450 | 1 | 451 | 0.0 | 931 |
| Msa1118740 | MtrunA17_Chr8g0378821 | 94.713 | 435 | 23 | 0 | 1 | 435 | 1 | 435 | 0.0 | 847 |
| Msa1118740 | MtrunA17_Chr1g0206881 | 89.778 | 450 | 46 | 0 | 1 | 450 | 1 | 450 | 0.0 | 831 |
| Msa1118740 | MtrunA17_Chr3g0140821 | 91.324 | 438 | 38 | 0 | 1 | 438 | 1 | 438 | 0.0 | 823 |
| Msa1118740 | MtrunA17_Chr4g0054511 | 90.888 | 439 | 40 | 0 | 1 | 439 | 1 | 439 | 0.0 | 822 |
| Msa1118740 | MtrunA17_Chr6g0461281 | 87.361 | 451 | 53 | 2 | 1 | 450 | 1 | 448 | 0.0 | 799 |
| Msa1118740 | MtrunA17_Chr2g0300491 | 68.282 | 454 | 133 | 3 | 1 | 448 | 1 | 449 | 0.0 | 622 |
| Msa1118740 | MtrunA17_Chr2g0300671 | 70.737 | 434 | 122 | 2 | 1 | 434 | 1 | 429 | 0.0 | 621 |
| Msa1118740 | MtrunA17_Chr4g0051631 | 41.244 | 434 | 245 | 3 | 1 | 434 | 1 | 424 | 5.14e-124 | 367 |
| Msa1118740 | MtrunA17_Chr4g0008361 | 41.475 | 434 | 244 | 3 | 1 | 434 | 1 | 424 | 2.22e-123 | 366 |
| Msa1118740 | MtrunA17_Chr4g0008401 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 3.82e-123 | 365 |
| Msa1118740 | MtrunA17_Chr7g0255791 | 40.553 | 434 | 248 | 3 | 1 | 434 | 1 | 424 | 1.33e-122 | 364 |
| Msa1118740 | MtrunA17_Chr2g0292921 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 1.39e-122 | 364 |
| Msa1118740 | MtrunA17_Chr4g0007371 | 40.596 | 436 | 247 | 3 | 1 | 434 | 1 | 426 | 2.41e-122 | 363 |
| Msa1118740 | MtrunA17_Chr1g0203181 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 2.41e-122 | 363 |
| Msa1118740 | MtrunA17_Chr8g0393021 | 40.222 | 450 | 257 | 3 | 1 | 450 | 1 | 438 | 2.64e-122 | 363 |
| Msa1118740 | MtrunA17_Chr3g0142731 | 39.401 | 434 | 255 | 1 | 1 | 434 | 1 | 426 | 2.87e-122 | 363 |
| Msa1118740 | MtrunA17_Chr8g0386781 | 38.902 | 437 | 251 | 3 | 1 | 434 | 1 | 424 | 3.27e-121 | 360 |
| Msa1118740 | MtrunA17_Chr3g0109241 | 87.681 | 138 | 17 | 0 | 268 | 405 | 1 | 138 | 9.10e-89 | 267 |
| Msa1118740 | MtrunA17_Chr7g0275431 | 31.461 | 445 | 284 | 8 | 2 | 433 | 3 | 439 | 2.79e-79 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118740 | AT5G19780.1 | 94.943 | 435 | 22 | 0 | 1 | 435 | 1 | 435 | 0.0 | 848 |
| Msa1118740 | AT5G19770.1 | 94.943 | 435 | 22 | 0 | 1 | 435 | 1 | 435 | 0.0 | 848 |
| Msa1118740 | AT1G64740.1 | 91.954 | 435 | 35 | 0 | 1 | 435 | 1 | 435 | 0.0 | 825 |
| Msa1118740 | AT1G50010.1 | 90.575 | 435 | 41 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa1118740 | AT1G04820.1 | 90.575 | 435 | 41 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa1118740 | AT4G14960.2 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 811 |
| Msa1118740 | AT4G14960.1 | 85.504 | 407 | 52 | 1 | 1 | 407 | 1 | 400 | 0.0 | 711 |
| Msa1118740 | AT1G75780.1 | 40.553 | 434 | 249 | 2 | 1 | 434 | 1 | 425 | 1.54e-125 | 372 |
| Msa1118740 | AT5G62690.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.19e-123 | 367 |
| Msa1118740 | AT5G62700.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.19e-123 | 367 |
| Msa1118740 | AT1G20010.1 | 40.323 | 434 | 250 | 2 | 1 | 434 | 1 | 425 | 1.71e-123 | 367 |
| Msa1118740 | AT5G12250.1 | 40.783 | 434 | 247 | 3 | 1 | 434 | 1 | 424 | 2.24e-123 | 366 |
| Msa1118740 | AT2G29550.1 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 1.19e-122 | 365 |
| Msa1118740 | AT4G20890.1 | 40.783 | 434 | 247 | 2 | 1 | 434 | 1 | 424 | 1.55e-122 | 364 |
| Msa1118740 | AT5G23860.2 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 3.02e-122 | 363 |
| Msa1118740 | AT5G23860.1 | 40.553 | 434 | 248 | 2 | 1 | 434 | 1 | 424 | 3.02e-122 | 363 |
| Msa1118740 | AT5G44340.1 | 40.783 | 434 | 247 | 4 | 1 | 434 | 1 | 424 | 7.98e-120 | 357 |
| Msa1118740 | AT5G05620.1 | 32.135 | 445 | 281 | 8 | 2 | 433 | 3 | 439 | 4.28e-80 | 256 |
| Msa1118740 | AT3G61650.1 | 31.685 | 445 | 283 | 8 | 2 | 433 | 3 | 439 | 6.10e-79 | 253 |
Find 115 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTGAGCAGTTAATTTC+TGG | 0.179011 | 7_3:-67497644 | Msa1118740:CDS |
| GGAGGTACTGGTTCTGGTTT+GGG | 0.226735 | 7_3:-67497394 | Msa1118740:CDS |
| GAAAGGTTGTCTGTCGATTA+TGG | 0.254191 | 7_3:-67497358 | Msa1118740:CDS |
| CACTGATGTGGTTGTACTTT+TGG | 0.262817 | 7_3:-67496893 | Msa1118740:CDS |
| TGCTAAGCTCTTCTATGTTT+TGG | 0.274209 | 7_3:-67495679 | Msa1118740:three_prime_UTR |
| TTTGTTCTGCCTGTTGTATC+TGG | 0.282355 | 7_3:-67495753 | Msa1118740:three_prime_UTR |
| TGGAGGTACTGGTTCTGGTT+TGG | 0.290830 | 7_3:-67497395 | Msa1118740:CDS |
| GTTGGTGGAGGTACTGGTTC+TGG | 0.329317 | 7_3:-67497400 | Msa1118740:CDS |
| CTAAGAGGGCATTTGTTCAT+TGG | 0.354538 | 7_3:-67495946 | Msa1118740:CDS |
| TGGTTTGGGATCGTTACTTT+TGG | 0.354669 | 7_3:-67497380 | Msa1118740:CDS |
| GCCTTTGCAGAGGATATTAC+AGG | 0.357050 | 7_3:+67496664 | None:intergenic |
| AAGGGCCTTATTTGTTGATC+TGG | 0.363705 | 7_3:-67497717 | Msa1118740:CDS |
| CGGTTCCAGATCAACAAATA+AGG | 0.370493 | 7_3:+67497712 | None:intergenic |
| TTGCCAGAAATTAACTGCTC+AGG | 0.405472 | 7_3:+67497641 | None:intergenic |
| AATGCTGTTGGTGGAGGTAC+TGG | 0.408533 | 7_3:-67497406 | Msa1118740:CDS |
| ACAGCTGCATTTACATCTTT+AGG | 0.409495 | 7_3:+67496511 | None:intergenic |
| GATATGGAACCAGGTTAGTC+TGG | 0.415527 | 7_3:+67496719 | None:intergenic |
| GAGATAATAAGTATTCATAT+TGG | 0.417940 | 7_3:-67498778 | Msa1118740:CDS |
| ATGAAATGGATACGAGGATA+TGG | 0.420479 | 7_3:+67496703 | None:intergenic |
| TACCATCTATCCTTCTCCTC+AGG | 0.422942 | 7_3:-67497314 | Msa1118740:intron |
| AACACCTTCTTCAGTGAGAC+TGG | 0.429484 | 7_3:-67497758 | Msa1118740:CDS |
| CACTTAGCCATCATACTTGA+CGG | 0.450335 | 7_3:+67496592 | None:intergenic |
| TTCTTCAGTGAGACTGGATC+TGG | 0.452584 | 7_3:-67497752 | Msa1118740:CDS |
| AAAACTGCGTTGGTGATCTC+AGG | 0.454547 | 7_3:+67496619 | None:intergenic |
| ACAGGAGGTGATGGTGATGA+AGG | 0.455554 | 7_3:+67495777 | None:intergenic |
| TGGTATCTTCTCCATGCAAT+TGG | 0.459726 | 7_3:-67495648 | Msa1118740:three_prime_UTR |
| GCATTTGTTCATTGGTATGT+TGG | 0.467216 | 7_3:-67495938 | Msa1118740:CDS |
| CATAAGACGAAAGCATGAAA+TGG | 0.468504 | 7_3:+67496689 | None:intergenic |
| AGTATTCATATTGGACAAGC+TGG | 0.473365 | 7_3:-67498769 | Msa1118740:CDS |
| TTGATCTCATGTATGCTAAG+AGG | 0.486229 | 7_3:-67495961 | Msa1118740:CDS |
| CTGGTACCACTGTTGGAGGC+TGG | 0.486551 | 7_3:+67496074 | None:intergenic |
| TCAAGTGGGGAATTCATGTT+GGG | 0.495335 | 7_3:-67498743 | Msa1118740:CDS |
| TTCAAGTGGGGAATTCATGT+TGG | 0.496744 | 7_3:-67498744 | Msa1118740:CDS |
| GTTATCGATGAAGTAAGAAC+TGG | 0.501415 | 7_3:-67497686 | Msa1118740:CDS |
| AATTAGTTTCTCCAATTGCA+TGG | 0.502315 | 7_3:+67495637 | None:intergenic |
| CATTGCAGTGATACCTCACC+TGG | 0.502593 | 7_3:-67497800 | Msa1118740:intron |
| CGGTTCAAGTTGGTATAAGT+TGG | 0.505038 | 7_3:+67496820 | None:intergenic |
| TACCTGAGGAGAAGGATAGA+TGG | 0.505051 | 7_3:+67497312 | None:intergenic |
| TACCTAGGCATCAATCCATC+AGG | 0.509994 | 7_3:+67498691 | None:intergenic |
| CTTCCTTGACAACTTCCTTG+AGG | 0.511080 | 7_3:-67496777 | Msa1118740:CDS |
| TCGCCTCCTGGTACCACTGT+TGG | 0.512189 | 7_3:+67496067 | None:intergenic |
| ATTACACAGCCAGATACAAC+AGG | 0.516662 | 7_3:+67495744 | None:intergenic |
| ACAACTTCCTTGAGGTTCGA+CGG | 0.518234 | 7_3:-67496769 | Msa1118740:CDS |
| GAACAGTTCAGTTTGTTGAC+TGG | 0.519065 | 7_3:-67496468 | Msa1118740:intron |
| CAAGGAGGAGGAAAGTGAAA+AGG | 0.519532 | 7_3:+67498834 | None:intergenic |
| TCCCCTTGCAAAATTATTAG+CGG | 0.522098 | 7_3:+67497610 | None:intergenic |
| GACAATTGCACTGGATTGCA+AGG | 0.523031 | 7_3:-67497442 | Msa1118740:CDS |
| ATTCCACACTTGAAACCAGT+TGG | 0.524605 | 7_3:+67496103 | None:intergenic |
| CCTCCTGGTACCACTGTTGG+AGG | 0.526246 | 7_3:+67496070 | None:intergenic |
| AACCTGATGGATTGATGCCT+AGG | 0.533197 | 7_3:-67498693 | Msa1118740:intron |
| GTGGAAAGAACACTGTTGTA+AGG | 0.534161 | 7_3:+67496934 | None:intergenic |
| AAAGCATCGTGTGCTACGCC+AGG | 0.534949 | 7_3:+67497782 | None:intergenic |
| TGATCTCATGTATGCTAAGA+GGG | 0.535385 | 7_3:-67495960 | Msa1118740:CDS |
| AGATCCAGTCTCACTGAAGA+AGG | 0.536937 | 7_3:+67497754 | None:intergenic |
| GAGCTTTATTGTCTTGAGCA+TGG | 0.539665 | 7_3:-67498721 | Msa1118740:CDS |
| AAATTAGCAGACAATTGCAC+TGG | 0.540742 | 7_3:-67497451 | Msa1118740:CDS |
| TGCCAGAAATTAACTGCTCA+GGG | 0.544963 | 7_3:+67497642 | None:intergenic |
| CAGCCTCCAACAGTGGTACC+AGG | 0.546341 | 7_3:-67496073 | Msa1118740:CDS |
| TTGGTATGTTGGTGAAGGAA+TGG | 0.546705 | 7_3:-67495927 | Msa1118740:CDS |
| AGAAATCAAACGGTTCAAGT+TGG | 0.546872 | 7_3:+67496810 | None:intergenic |
| TATGAAGAAGTTGGAGCTGA+AGG | 0.548058 | 7_3:-67495851 | Msa1118740:CDS |
| TCTTCTTGAGCACACTGATG+TGG | 0.548393 | 7_3:-67496905 | Msa1118740:CDS |
| AAGAGCAGCAAGATCCTCCC+TGG | 0.548874 | 7_3:+67495883 | None:intergenic |
| GTTGGAGCTGAAGGTGAAGC+TGG | 0.550120 | 7_3:-67495842 | Msa1118740:CDS |
| ATTCTTAATACCTGAGGAGA+AGG | 0.552200 | 7_3:+67497304 | None:intergenic |
| TCCTAGACACGGAAAGTACA+TGG | 0.554265 | 7_3:-67496566 | Msa1118740:CDS |
| AGATAACTTGAGAAATCAAA+CGG | 0.555063 | 7_3:+67496800 | None:intergenic |
| GATTGCACCGTCGAACCTCA+AGG | 0.556970 | 7_3:+67496762 | None:intergenic |
| AATTGCATGGAGAAGATACC+AGG | 0.557317 | 7_3:+67495650 | None:intergenic |
| CCTTTGCAGAGGATATTACA+GGG | 0.558058 | 7_3:+67496665 | None:intergenic |
| ACCTTCGCAAGATCGCCTCC+TGG | 0.558416 | 7_3:+67496055 | None:intergenic |
| ACAACAGGCAGAACAAAGAC+AGG | 0.558857 | 7_3:+67495759 | None:intergenic |
| AGAACAAAGACAGGAGGTGA+TGG | 0.560803 | 7_3:+67495768 | None:intergenic |
| CAACAACACAGCTGTTTCCG+AGG | 0.568785 | 7_3:-67496008 | Msa1118740:CDS |
| TGAGCAGTTAATTTCTGGCA+AGG | 0.570785 | 7_3:-67497639 | Msa1118740:CDS |
| GCCATGTACTTTCCGTGTCT+AGG | 0.570873 | 7_3:+67496565 | None:intergenic |
| AGATCAACAAATAAGGCCCT+TGG | 0.576663 | 7_3:+67497719 | None:intergenic |
| CTTACTTCATCGATAACAGT+CGG | 0.579173 | 7_3:+67497692 | None:intergenic |
| TACTGAATTCCAGACTAACC+TGG | 0.579785 | 7_3:-67496728 | Msa1118740:CDS |
| GTTCATTGGTATGTTGGTGA+AGG | 0.583966 | 7_3:-67495932 | Msa1118740:CDS |
| CAGGAACTGATATCTGCTCA+TGG | 0.588381 | 7_3:+67496638 | None:intergenic |
| TGTCCAACTGGTTTCAAGTG+TGG | 0.589380 | 7_3:-67496106 | Msa1118740:CDS |
| GAGCATGGAATTCAACCTGA+TGG | 0.591414 | 7_3:-67498706 | Msa1118740:CDS |
| GGACAAGCTGGAATTCAAGT+GGG | 0.593353 | 7_3:-67498757 | Msa1118740:CDS |
| GGATACGAGGATATGGAACC+AGG | 0.594253 | 7_3:+67496710 | None:intergenic |
| AAATGAAAATCACAAGGAGG+AGG | 0.595600 | 7_3:+67498822 | None:intergenic |
| GGTGATGAAGGAATGAGGAT+AGG | 0.603514 | 7_3:+67495789 | None:intergenic |
| GTGCTCAAGAAGAGAATGAG+TGG | 0.604916 | 7_3:+67496915 | None:intergenic |
| TTTGCAAGGGGACACTACAC+CGG | 0.607003 | 7_3:-67497599 | Msa1118740:intron |
| ATCTGGCAAGCATGTACCAA+GGG | 0.610864 | 7_3:-67497735 | Msa1118740:CDS |
| CCCTGTAATATCCTCTGCAA+AGG | 0.611099 | 7_3:-67496665 | Msa1118740:CDS |
| ACACAATACTAACCGACTCA+AGG | 0.611462 | 7_3:+67495614 | None:intergenic |
| ACCAGGAGGCGATCTTGCGA+AGG | 0.611647 | 7_3:-67496056 | Msa1118740:CDS |
| TGGACAAGCTGGAATTCAAG+TGG | 0.612580 | 7_3:-67498758 | Msa1118740:CDS |
| GAACCTCAAGGAAGTTGTCA+AGG | 0.614211 | 7_3:+67496774 | None:intergenic |
| GAGAAACTAATTCCTTGAGT+CGG | 0.614584 | 7_3:-67495626 | Msa1118740:three_prime_UTR |
| CAACTACCAGCCTCCAACAG+TGG | 0.617772 | 7_3:-67496080 | Msa1118740:CDS |
| GTTGGTGAAGGAATGGAAGA+AGG | 0.620831 | 7_3:-67495920 | Msa1118740:CDS |
| ATCGTGTGCTACGCCAGGTG+AGG | 0.633117 | 7_3:+67497787 | None:intergenic |
| AACTGATATCTGCTCATGGT+AGG | 0.635921 | 7_3:+67496642 | None:intergenic |
| TGCTGCAAATGAAAATCACA+AGG | 0.653931 | 7_3:+67498816 | None:intergenic |
| CAACATCTCCGCGATACATG+AGG | 0.654917 | 7_3:+67496536 | None:intergenic |
| GTGATGGTGATGAAGGAATG+AGG | 0.667219 | 7_3:+67495784 | None:intergenic |
| GACAAGCTGGAATTCAAGTG+GGG | 0.670284 | 7_3:-67498756 | Msa1118740:CDS |
| GATCTGGCAAGCATGTACCA+AGG | 0.671782 | 7_3:-67497736 | Msa1118740:CDS |
| CTCATGGTAGGCCTTTGCAG+AGG | 0.677206 | 7_3:+67496654 | None:intergenic |
| GCATGCTGCCTCATGTATCG+CGG | 0.677664 | 7_3:-67496544 | Msa1118740:CDS |
| ATCAATGCGAGAGAAAACCT+CGG | 0.683525 | 7_3:+67495991 | None:intergenic |
| CTTTGCAGAGGATATTACAG+GGG | 0.699325 | 7_3:+67496666 | None:intergenic |
| ACAGGCAGAACAAAGACAGG+AGG | 0.715814 | 7_3:+67495762 | None:intergenic |
| CCTCCAACAGTGGTACCAGG+AGG | 0.717379 | 7_3:-67496070 | Msa1118740:CDS |
| GTTCGACGGTGCAATCAACG+TGG | 0.720350 | 7_3:-67496755 | Msa1118740:CDS |
| GAAAGCATGAAATGGATACG+AGG | 0.722207 | 7_3:+67496697 | None:intergenic |
| GCTAAGTGTGATCCTAGACA+CGG | 0.723184 | 7_3:-67496577 | Msa1118740:CDS |
| TGCAAATGAAAATCACAAGG+AGG | 0.735187 | 7_3:+67498819 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGGAAATATATAAAATTTT+AGG | + | chr7_3:67495948-67495967 | None:intergenic | 10.0% |
| !! | TATATATCCAAATTAAAAAT+GGG | + | chr7_3:67496168-67496187 | None:intergenic | 10.0% |
| !! | TTATATATCCAAATTAAAAA+TGG | + | chr7_3:67496169-67496188 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGGATATATAAA+AGG | - | chr7_3:67496170-67496189 | Msa1118740:intron | 10.0% |
| !! | AAATCCTAATATATATTATT+CGG | + | chr7_3:67497397-67497416 | None:intergenic | 10.0% |
| !! | TAATCCGAATAATATATATT+AGG | - | chr7_3:67497390-67497409 | Msa1118740:CDS | 15.0% |
| !! | AAAAATCATTAGATATAGAA+AGG | - | chr7_3:67497565-67497584 | Msa1118740:intron | 15.0% |
| !! | GAGATAATAAGTATTCATAT+TGG | - | chr7_3:67495630-67495649 | Msa1118740:three_prime_UTR | 20.0% |
| !! | TCATAAATAGTTGACATATA+TGG | - | chr7_3:67496118-67496137 | Msa1118740:intron | 20.0% |
| !! | GTTGATCTTAAATTAGTATA+AGG | - | chr7_3:67496140-67496159 | Msa1118740:intron | 20.0% |
| !! | ATATATATTATGTAGACCAA+GGG | - | chr7_3:67496214-67496233 | Msa1118740:intron | 20.0% |
| !! | TGAGTTAACAAGTTTAATAA+TGG | + | chr7_3:67496391-67496410 | None:intergenic | 20.0% |
| !!! | ATTAAACTTGTTAACTCAAA+TGG | - | chr7_3:67496393-67496412 | Msa1118740:intron | 20.0% |
| !!! | TGGAATTTTTAACTCATATA+TGG | - | chr7_3:67496545-67496564 | Msa1118740:CDS | 20.0% |
| !! | AATGTAACAAATAACAAAGT+AGG | + | chr7_3:67497171-67497190 | None:intergenic | 20.0% |
| !!! | AACAATACCTTTTAATATGT+AGG | - | chr7_3:67497431-67497450 | Msa1118740:CDS | 20.0% |
| !!! | TATAATTGCTTTATTCTCAT+AGG | - | chr7_3:67498161-67498180 | Msa1118740:intron | 20.0% |
| !!! | ATAATTGCTTTATTCTCATA+GGG | - | chr7_3:67498162-67498181 | Msa1118740:intron | 20.0% |
| !!! | CAAACTGTTTTTTTAGTAAA+AGG | + | chr7_3:67498253-67498272 | None:intergenic | 20.0% |
| !! | AGAAACATTCTTAAAAATAG+TGG | + | chr7_3:67498703-67498722 | None:intergenic | 20.0% |
| !! | TCATATAAAAAAGTGTACCT+AGG | + | chr7_3:67495735-67495754 | None:intergenic | 25.0% |
| ! | CTTGTTTACATTAATTGTAG+TGG | - | chr7_3:67495775-67495794 | Msa1118740:three_prime_UTR | 25.0% |
| ! | AAAAATAGAAAAAACCCAGA+AGG | + | chr7_3:67495977-67495996 | None:intergenic | 25.0% |
| !!! | TTCTGGGTTTTTTCTATTTT+TGG | - | chr7_3:67495976-67495995 | Msa1118740:CDS | 25.0% |
| !!! | ATTTTTGGTGTTTTCATTTG+TGG | - | chr7_3:67495991-67496010 | Msa1118740:CDS | 25.0% |
| !!! | TTTTTGGTGTTTTCATTTGT+GGG | - | chr7_3:67495992-67496011 | Msa1118740:CDS | 25.0% |
| !!! | CTATTTTTGCATGATAAGAA+TGG | + | chr7_3:67496097-67496116 | None:intergenic | 25.0% |
| !!! | TAAGGATCCCATTTTTAATT+TGG | - | chr7_3:67496158-67496177 | Msa1118740:intron | 25.0% |
| ! | GATATATATTATGTAGACCA+AGG | - | chr7_3:67496213-67496232 | Msa1118740:intron | 25.0% |
| !!! | ATGTTTCTAGTTTTCCAATT+TGG | + | chr7_3:67496310-67496329 | None:intergenic | 25.0% |
| ! | CAAATGGTTGATTAATGATT+AGG | - | chr7_3:67496409-67496428 | Msa1118740:intron | 25.0% |
| !!! | ATGATTGATTTTCTTGAGTT+TGG | - | chr7_3:67496487-67496506 | Msa1118740:CDS | 25.0% |
| !!! | TTTGGACTTTTTAACTCATA+AGG | - | chr7_3:67496468-67496487 | Msa1118740:intron | 25.0% |
| !!! | AGGTTGATTTGTTTTATGTT+TGG | - | chr7_3:67496525-67496544 | Msa1118740:CDS | 25.0% |
| ! | CATAGAATCACAAATATAAC+AGG | + | chr7_3:67497293-67497312 | None:intergenic | 25.0% |
| ! | GTAGATACCTACATATTAAA+AGG | + | chr7_3:67497441-67497460 | None:intergenic | 25.0% |
| ! | AGATAACTTGAGAAATCAAA+CGG | + | chr7_3:67497611-67497630 | None:intergenic | 25.0% |
| ! | TTCCTTGAAATATCACATTA+TGG | - | chr7_3:67497978-67497997 | Msa1118740:intron | 25.0% |
| ! | AACCATAATGTGATATTTCA+AGG | + | chr7_3:67497983-67498002 | None:intergenic | 25.0% |
| !! | TAATTGCTTTATTCTCATAG+GGG | - | chr7_3:67498163-67498182 | Msa1118740:intron | 25.0% |
| !! | ACATTCTTAAAAATAGTGGA+GGG | + | chr7_3:67498699-67498718 | None:intergenic | 25.0% |
| ! | AACATTCTTAAAAATAGTGG+AGG | + | chr7_3:67498700-67498719 | None:intergenic | 25.0% |
| ! | ATGATGAAAAAAAATGGTCT+CGG | + | chr7_3:67498859-67498878 | None:intergenic | 25.0% |
| TATTTCCTAATAGTTCCTTC+TGG | - | chr7_3:67495959-67495978 | Msa1118740:CDS | 30.0% | |
| ATTTCCTAATAGTTCCTTCT+GGG | - | chr7_3:67495960-67495979 | Msa1118740:CDS | 30.0% | |
| ! | TTTTTGCATGATAAGAATGG+AGG | + | chr7_3:67496094-67496113 | None:intergenic | 30.0% |
| CTAGAAACATCTCTTCAATT+TGG | - | chr7_3:67496320-67496339 | Msa1118740:intron | 30.0% | |
| TAACTCATATATGGTTGATC+AGG | - | chr7_3:67496554-67496573 | Msa1118740:CDS | 30.0% | |
| !!! | TTCACTTTTTAACTTGACAG+CGG | - | chr7_3:67496870-67496889 | Msa1118740:CDS | 30.0% |
| ! | TGTCTGCTAATTTTCTGATA+CGG | + | chr7_3:67496950-67496969 | None:intergenic | 30.0% |
| !!! | TTCTTTGTTTTCAATGCTGT+TGG | - | chr7_3:67496990-67497009 | Msa1118740:intron | 30.0% |
| TATGGCAAAAAGTCTAAACT+TGG | - | chr7_3:67497068-67497087 | Msa1118740:intron | 30.0% | |
| CTGTATGCGTTAATAAATAG+AGG | + | chr7_3:67497338-67497357 | None:intergenic | 30.0% | |
| !! | TCTAGATAGTTTAACTTGCA+AGG | + | chr7_3:67498031-67498050 | None:intergenic | 30.0% |
| ! | AGTGCTGAAATTATGCAATT+TGG | - | chr7_3:67498059-67498078 | Msa1118740:intron | 30.0% |
| TTTAGTAAAAGGCGAAAGAA+TGG | + | chr7_3:67498242-67498261 | None:intergenic | 30.0% | |
| !! | TGATATTGGTGACTATTTTC+AGG | - | chr7_3:67498279-67498298 | Msa1118740:intron | 30.0% |
| ! | AATGGAAGAAGGTGAATTTT+CGG | - | chr7_3:67498499-67498518 | Msa1118740:intron | 30.0% |
| GAAAAAGACTATGAAGAAGT+TGG | - | chr7_3:67498548-67498567 | Msa1118740:intron | 30.0% | |
| ! | CATTCTTAAAAATAGTGGAG+GGG | + | chr7_3:67498698-67498717 | None:intergenic | 30.0% |
| ! | AATTAGTTTCTCCAATTGCA+TGG | + | chr7_3:67498774-67498793 | None:intergenic | 30.0% |
| AAATGAAAATCACAAGGAGG+AGG | + | chr7_3:67495589-67495608 | None:intergenic | 35.0% | |
| TGCAAATGAAAATCACAAGG+AGG | + | chr7_3:67495592-67495611 | None:intergenic | 35.0% | |
| TGCTGCAAATGAAAATCACA+AGG | + | chr7_3:67495595-67495614 | None:intergenic | 35.0% | |
| AGTATTCATATTGGACAAGC+TGG | - | chr7_3:67495639-67495658 | Msa1118740:three_prime_UTR | 35.0% | |
| AAAACCCAGAAGGAACTATT+AGG | + | chr7_3:67495967-67495986 | None:intergenic | 35.0% | |
| CCAATTTGGCAATTCTCTAT+TGG | + | chr7_3:67496296-67496315 | None:intergenic | 35.0% | |
| CCAATAGAGAATTGCCAAAT+TGG | - | chr7_3:67496293-67496312 | Msa1118740:intron | 35.0% | |
| !!! | ATGCTGCTTTTCTTGATGTT+TGG | - | chr7_3:67496450-67496469 | Msa1118740:intron | 35.0% |
| CTTACTTCATCGATAACAGT+CGG | + | chr7_3:67496719-67496738 | None:intergenic | 35.0% | |
| GTTATCGATGAAGTAAGAAC+TGG | - | chr7_3:67496722-67496741 | Msa1118740:CDS | 35.0% | |
| ! | ATGCCGCTAATAATTTTGCA+AGG | - | chr7_3:67496795-67496814 | Msa1118740:CDS | 35.0% |
| ! | TGCCGCTAATAATTTTGCAA+GGG | - | chr7_3:67496796-67496815 | Msa1118740:CDS | 35.0% |
| TCCCCTTGCAAAATTATTAG+CGG | + | chr7_3:67496801-67496820 | None:intergenic | 35.0% | |
| AAATTAGCAGACAATTGCAC+TGG | - | chr7_3:67496957-67496976 | Msa1118740:CDS | 35.0% | |
| !! | TTTGTTTTCAATGCTGTTGG+TGG | - | chr7_3:67496993-67497012 | Msa1118740:intron | 35.0% |
| ATTCTTAATACCTGAGGAGA+AGG | + | chr7_3:67497107-67497126 | None:intergenic | 35.0% | |
| GTCTTCATTCTTAATACCTG+AGG | + | chr7_3:67497113-67497132 | None:intergenic | 35.0% | |
| ATCTGTTCCACTCATTCATA+TGG | - | chr7_3:67497252-67497271 | Msa1118740:intron | 35.0% | |
| CCATAAACCATATGAATGAG+TGG | + | chr7_3:67497262-67497281 | None:intergenic | 35.0% | |
| CCACTCATTCATATGGTTTA+TGG | - | chr7_3:67497259-67497278 | Msa1118740:intron | 35.0% | |
| AGAAATCAAACGGTTCAAGT+TGG | + | chr7_3:67497601-67497620 | None:intergenic | 35.0% | |
| ATGAAATGGATACGAGGATA+TGG | + | chr7_3:67497708-67497727 | None:intergenic | 35.0% | |
| ! | CATAAGACGAAAGCATGAAA+TGG | + | chr7_3:67497722-67497741 | None:intergenic | 35.0% |
| ACAGCTGCATTTACATCTTT+AGG | + | chr7_3:67497900-67497919 | None:intergenic | 35.0% | |
| ACAGTTTGACTGAGTGATAT+TGG | - | chr7_3:67498265-67498284 | Msa1118740:intron | 35.0% | |
| TTGATCTCATGTATGCTAAG+AGG | - | chr7_3:67498447-67498466 | Msa1118740:intron | 35.0% | |
| TGATCTCATGTATGCTAAGA+GGG | - | chr7_3:67498448-67498467 | Msa1118740:intron | 35.0% | |
| GCATTTGTTCATTGGTATGT+TGG | - | chr7_3:67498470-67498489 | Msa1118740:intron | 35.0% | |
| ! | TGCTAAGCTCTTCTATGTTT+TGG | - | chr7_3:67498729-67498748 | Msa1118740:CDS | 35.0% |
| !!! | TCTATGTTTTGGTGTAAACC+TGG | - | chr7_3:67498740-67498759 | Msa1118740:CDS | 35.0% |
| GAGAAACTAATTCCTTGAGT+CGG | - | chr7_3:67498782-67498801 | Msa1118740:CDS | 35.0% | |
| TTCAAGTGGGGAATTCATGT+TGG | - | chr7_3:67495664-67495683 | Msa1118740:three_prime_UTR | 40.0% | |
| TCAAGTGGGGAATTCATGTT+GGG | - | chr7_3:67495665-67495684 | Msa1118740:three_prime_UTR | 40.0% | |
| !! | GAGCTTTATTGTCTTGAGCA+TGG | - | chr7_3:67495687-67495706 | Msa1118740:three_prime_UTR | 40.0% |
| !! | GTGGGTCTTTTGAAAGCTTT+TGG | - | chr7_3:67496010-67496029 | Msa1118740:CDS | 40.0% |
| CCTTGAAGAATTGAATCCCT+TGG | + | chr7_3:67496233-67496252 | None:intergenic | 40.0% | |
| CCAAGGGATTCAATTCTTCA+AGG | - | chr7_3:67496230-67496249 | Msa1118740:intron | 40.0% | |
| AGGATACTGCTTGTAATGAG+TGG | - | chr7_3:67496250-67496269 | Msa1118740:intron | 40.0% | |
| AGATCAACAAATAAGGCCCT+TGG | + | chr7_3:67496692-67496711 | None:intergenic | 40.0% | |
| !! | AAGGGCCTTATTTGTTGATC+TGG | - | chr7_3:67496691-67496710 | Msa1118740:CDS | 40.0% |
| CGGTTCCAGATCAACAAATA+AGG | + | chr7_3:67496699-67496718 | None:intergenic | 40.0% | |
| TGCCAGAAATTAACTGCTCA+GGG | + | chr7_3:67496769-67496788 | None:intergenic | 40.0% | |
| TTGCCAGAAATTAACTGCTC+AGG | + | chr7_3:67496770-67496789 | None:intergenic | 40.0% | |
| !! | TGAGCAGTTAATTTCTGGCA+AGG | - | chr7_3:67496769-67496788 | Msa1118740:CDS | 40.0% |
| ! | GCCGCTAATAATTTTGCAAG+GGG | - | chr7_3:67496797-67496816 | Msa1118740:CDS | 40.0% |
| TGCGTTAGAAATTGCCTTAC+CGG | + | chr7_3:67496831-67496850 | None:intergenic | 40.0% | |
| ! | CTAATTTTCTGATACGGTCG+AGG | + | chr7_3:67496944-67496963 | None:intergenic | 40.0% |
| !! | TGGTTTGGGATCGTTACTTT+TGG | - | chr7_3:67497028-67497047 | Msa1118740:intron | 40.0% |
| !!! | TGGGATCGTTACTTTTGGAA+AGG | - | chr7_3:67497033-67497052 | Msa1118740:intron | 40.0% |
| ! | GAAAGGTTGTCTGTCGATTA+TGG | - | chr7_3:67497050-67497069 | Msa1118740:intron | 40.0% |
| GTGGAAAGAACACTGTTGTA+AGG | + | chr7_3:67497477-67497496 | None:intergenic | 40.0% | |
| ! | CACTGATGTGGTTGTACTTT+TGG | - | chr7_3:67497515-67497534 | Msa1118740:intron | 40.0% |
| !! | CGGTTCAAGTTGGTATAAGT+TGG | + | chr7_3:67497591-67497610 | None:intergenic | 40.0% |
| TACTGAATTCCAGACTAACC+TGG | - | chr7_3:67497680-67497699 | Msa1118740:CDS | 40.0% | |
| ! | GAAAGCATGAAATGGATACG+AGG | + | chr7_3:67497714-67497733 | None:intergenic | 40.0% |
| CTTTGCAGAGGATATTACAG+GGG | + | chr7_3:67497745-67497764 | None:intergenic | 40.0% | |
| CCTTTGCAGAGGATATTACA+GGG | + | chr7_3:67497746-67497765 | None:intergenic | 40.0% | |
| AACTGATATCTGCTCATGGT+AGG | + | chr7_3:67497769-67497788 | None:intergenic | 40.0% | |
| ! | TTTTGAGCCGTCAAGTATGA+TGG | - | chr7_3:67497809-67497828 | Msa1118740:intron | 40.0% |
| CACTTAGCCATCATACTTGA+CGG | + | chr7_3:67497819-67497838 | None:intergenic | 40.0% | |
| !! | GAACAGTTCAGTTTGTTGAC+TGG | - | chr7_3:67497940-67497959 | Msa1118740:intron | 40.0% |
| !!! | ACTATTTTCAGGTGTCCAAC+TGG | - | chr7_3:67498290-67498309 | Msa1118740:intron | 40.0% |
| ATTCCACACTTGAAACCAGT+TGG | + | chr7_3:67498308-67498327 | None:intergenic | 40.0% | |
| ATCAATGCGAGAGAAAACCT+CGG | + | chr7_3:67498420-67498439 | None:intergenic | 40.0% | |
| !! | CTAAGAGGGCATTTGTTCAT+TGG | - | chr7_3:67498462-67498481 | Msa1118740:intron | 40.0% |
| ! | GTTCATTGGTATGTTGGTGA+AGG | - | chr7_3:67498476-67498495 | Msa1118740:intron | 40.0% |
| ! | TTGGTATGTTGGTGAAGGAA+TGG | - | chr7_3:67498481-67498500 | Msa1118740:intron | 40.0% |
| TATGAAGAAGTTGGAGCTGA+AGG | - | chr7_3:67498557-67498576 | Msa1118740:intron | 40.0% | |
| TTTGTTCTGCCTGTTGTATC+TGG | - | chr7_3:67498655-67498674 | Msa1118740:intron | 40.0% | |
| ATTACACAGCCAGATACAAC+AGG | + | chr7_3:67498667-67498686 | None:intergenic | 40.0% | |
| AATTGCATGGAGAAGATACC+AGG | + | chr7_3:67498761-67498780 | None:intergenic | 40.0% | |
| TGGTATCTTCTCCATGCAAT+TGG | - | chr7_3:67498760-67498779 | Msa1118740:CDS | 40.0% | |
| ! | ACACAATACTAACCGACTCA+AGG | + | chr7_3:67498797-67498816 | None:intergenic | 40.0% |
| CAAGGAGGAGGAAAGTGAAA+AGG | + | chr7_3:67495577-67495596 | None:intergenic | 45.0% | |
| TGGACAAGCTGGAATTCAAG+TGG | - | chr7_3:67495650-67495669 | Msa1118740:three_prime_UTR | 45.0% | |
| GGACAAGCTGGAATTCAAGT+GGG | - | chr7_3:67495651-67495670 | Msa1118740:three_prime_UTR | 45.0% | |
| GACAAGCTGGAATTCAAGTG+GGG | - | chr7_3:67495652-67495671 | Msa1118740:three_prime_UTR | 45.0% | |
| GAGCATGGAATTCAACCTGA+TGG | - | chr7_3:67495702-67495721 | Msa1118740:three_prime_UTR | 45.0% | |
| !! | AACCTGATGGATTGATGCCT+AGG | - | chr7_3:67495715-67495734 | Msa1118740:three_prime_UTR | 45.0% |
| TACCTAGGCATCAATCCATC+AGG | + | chr7_3:67495720-67495739 | None:intergenic | 45.0% | |
| AACACCTTCTTCAGTGAGAC+TGG | - | chr7_3:67496650-67496669 | Msa1118740:CDS | 45.0% | |
| AGATCCAGTCTCACTGAAGA+AGG | + | chr7_3:67496657-67496676 | None:intergenic | 45.0% | |
| TTCTTCAGTGAGACTGGATC+TGG | - | chr7_3:67496656-67496675 | Msa1118740:CDS | 45.0% | |
| ATCTGGCAAGCATGTACCAA+GGG | - | chr7_3:67496673-67496692 | Msa1118740:CDS | 45.0% | |
| CACCCTGAGCAGTTAATTTC+TGG | - | chr7_3:67496764-67496783 | Msa1118740:CDS | 45.0% | |
| CTGCAGCACAGATACACAAA+TGG | + | chr7_3:67496896-67496915 | None:intergenic | 45.0% | |
| TTGTGTATCTGTGCTGCAGT+TGG | - | chr7_3:67496897-67496916 | Msa1118740:CDS | 45.0% | |
| GACAATTGCACTGGATTGCA+AGG | - | chr7_3:67496966-67496985 | Msa1118740:intron | 45.0% | |
| !! | GTTTTCAATGCTGTTGGTGG+AGG | - | chr7_3:67496996-67497015 | Msa1118740:intron | 45.0% |
| TACCATCTATCCTTCTCCTC+AGG | - | chr7_3:67497094-67497113 | Msa1118740:intron | 45.0% | |
| TACCTGAGGAGAAGGATAGA+TGG | + | chr7_3:67497099-67497118 | None:intergenic | 45.0% | |
| GTGCTCAAGAAGAGAATGAG+TGG | + | chr7_3:67497496-67497515 | None:intergenic | 45.0% | |
| TCTTCTTGAGCACACTGATG+TGG | - | chr7_3:67497503-67497522 | Msa1118740:intron | 45.0% | |
| CTTCCTTGACAACTTCCTTG+AGG | - | chr7_3:67497631-67497650 | Msa1118740:CDS | 45.0% | |
| GAACCTCAAGGAAGTTGTCA+AGG | + | chr7_3:67497637-67497656 | None:intergenic | 45.0% | |
| ACAACTTCCTTGAGGTTCGA+CGG | - | chr7_3:67497639-67497658 | Msa1118740:CDS | 45.0% | |
| ! | GATATGGAACCAGGTTAGTC+TGG | + | chr7_3:67497692-67497711 | None:intergenic | 45.0% |
| CCCTGTAATATCCTCTGCAA+AGG | - | chr7_3:67497743-67497762 | Msa1118740:CDS | 45.0% | |
| GCCTTTGCAGAGGATATTAC+AGG | + | chr7_3:67497747-67497766 | None:intergenic | 45.0% | |
| CAGGAACTGATATCTGCTCA+TGG | + | chr7_3:67497773-67497792 | None:intergenic | 45.0% | |
| !! | AAAACTGCGTTGGTGATCTC+AGG | + | chr7_3:67497792-67497811 | None:intergenic | 45.0% |
| GCTAAGTGTGATCCTAGACA+CGG | - | chr7_3:67497831-67497850 | Msa1118740:intron | 45.0% | |
| ! | TCCTAGACACGGAAAGTACA+TGG | - | chr7_3:67497842-67497861 | Msa1118740:intron | 45.0% |
| ! | TGTCCAACTGGTTTCAAGTG+TGG | - | chr7_3:67498302-67498321 | Msa1118740:intron | 45.0% |
| ! | GTTGGTGAAGGAATGGAAGA+AGG | - | chr7_3:67498488-67498507 | Msa1118740:intron | 45.0% |
| ! | AAGGTGAATTTTCGGAAGCC+AGG | - | chr7_3:67498507-67498526 | Msa1118740:intron | 45.0% |
| ! | AGGTGAATTTTCGGAAGCCA+GGG | - | chr7_3:67498508-67498527 | Msa1118740:intron | 45.0% |
| GGTGATGAAGGAATGAGGAT+AGG | + | chr7_3:67498622-67498641 | None:intergenic | 45.0% | |
| ! | GTGATGGTGATGAAGGAATG+AGG | + | chr7_3:67498627-67498646 | None:intergenic | 45.0% |
| AGAACAAAGACAGGAGGTGA+TGG | + | chr7_3:67498643-67498662 | None:intergenic | 45.0% | |
| ACAACAGGCAGAACAAAGAC+AGG | + | chr7_3:67498652-67498671 | None:intergenic | 45.0% | |
| CATTGCAGTGATACCTCACC+TGG | - | chr7_3:67496608-67496627 | Msa1118740:CDS | 50.0% | |
| GATCTGGCAAGCATGTACCA+AGG | - | chr7_3:67496672-67496691 | Msa1118740:CDS | 50.0% | |
| TTTGCAAGGGGACACTACAC+CGG | - | chr7_3:67496809-67496828 | Msa1118740:CDS | 50.0% | |
| ! | AATGCTGTTGGTGGAGGTAC+TGG | - | chr7_3:67497002-67497021 | Msa1118740:intron | 50.0% |
| !! | TGGAGGTACTGGTTCTGGTT+TGG | - | chr7_3:67497013-67497032 | Msa1118740:intron | 50.0% |
| !! | GGAGGTACTGGTTCTGGTTT+GGG | - | chr7_3:67497014-67497033 | Msa1118740:intron | 50.0% |
| GGATACGAGGATATGGAACC+AGG | + | chr7_3:67497701-67497720 | None:intergenic | 50.0% | |
| TGACGGCTCAAAAACTGCGT+TGG | + | chr7_3:67497802-67497821 | None:intergenic | 50.0% | |
| GCCATGTACTTTCCGTGTCT+AGG | + | chr7_3:67497846-67497865 | None:intergenic | 50.0% | |
| CAACATCTCCGCGATACATG+AGG | + | chr7_3:67497875-67497894 | None:intergenic | 50.0% | |
| TTCGCTTTGCGCTCATCACA+CGG | + | chr7_3:67498219-67498238 | None:intergenic | 50.0% | |
| ! | CAACAACACAGCTGTTTCCG+AGG | - | chr7_3:67498400-67498419 | Msa1118740:intron | 50.0% |
| ! | TGAATTTTCGGAAGCCAGGG+AGG | - | chr7_3:67498511-67498530 | Msa1118740:intron | 50.0% |
| ! | ACAGGAGGTGATGGTGATGA+AGG | + | chr7_3:67498634-67498653 | None:intergenic | 50.0% |
| ACAGGCAGAACAAAGACAGG+AGG | + | chr7_3:67498649-67498668 | None:intergenic | 50.0% | |
| !! | AAAGCATCGTGTGCTACGCC+AGG | + | chr7_3:67496629-67496648 | None:intergenic | 55.0% |
| AAGGGGACACTACACCGGTA+AGG | - | chr7_3:67496814-67496833 | Msa1118740:CDS | 55.0% | |
| !! | GTTGGTGGAGGTACTGGTTC+TGG | - | chr7_3:67497008-67497027 | Msa1118740:intron | 55.0% |
| GATTGCACCGTCGAACCTCA+AGG | + | chr7_3:67497649-67497668 | None:intergenic | 55.0% | |
| GTTCGACGGTGCAATCAACG+TGG | - | chr7_3:67497653-67497672 | Msa1118740:CDS | 55.0% | |
| CTCATGGTAGGCCTTTGCAG+AGG | + | chr7_3:67497757-67497776 | None:intergenic | 55.0% | |
| GCATGCTGCCTCATGTATCG+CGG | - | chr7_3:67497864-67497883 | Msa1118740:intron | 55.0% | |
| CAACTACCAGCCTCCAACAG+TGG | - | chr7_3:67498328-67498347 | Msa1118740:intron | 55.0% | |
| AAGAGCAGCAAGATCCTCCC+TGG | + | chr7_3:67498528-67498547 | None:intergenic | 55.0% | |
| GTTGGAGCTGAAGGTGAAGC+TGG | - | chr7_3:67498566-67498585 | Msa1118740:intron | 55.0% | |
| ATCGTGTGCTACGCCAGGTG+AGG | + | chr7_3:67496624-67496643 | None:intergenic | 60.0% | |
| CTGGTACCACTGTTGGAGGC+TGG | + | chr7_3:67498337-67498356 | None:intergenic | 60.0% | |
| CAGCCTCCAACAGTGGTACC+AGG | - | chr7_3:67498335-67498354 | Msa1118740:intron | 60.0% | |
| CCTCCTGGTACCACTGTTGG+AGG | + | chr7_3:67498341-67498360 | None:intergenic | 60.0% | |
| CCTCCAACAGTGGTACCAGG+AGG | - | chr7_3:67498338-67498357 | Msa1118740:intron | 60.0% | |
| TCGCCTCCTGGTACCACTGT+TGG | + | chr7_3:67498344-67498363 | None:intergenic | 60.0% | |
| ACCAGGAGGCGATCTTGCGA+AGG | - | chr7_3:67498352-67498371 | Msa1118740:intron | 60.0% | |
| ACCTTCGCAAGATCGCCTCC+TGG | + | chr7_3:67498356-67498375 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 67495549 | 67498881 | 67495549 | ID=Msa1118740;Name=Msa1118740 |
| chr7_3 | mRNA | 67495549 | 67498881 | 67495549 | ID=Msa1118740-mRNA-1;Parent=Msa1118740;Name=Msa1118740-mRNA-1;_AED=0.02;_eAED=0.02;_QI=75|1|1|1|1|1|5|265|450 |
| chr7_3 | exon | 67495549 | 67496129 | 67495549 | ID=Msa1118740-mRNA-1:exon:16637;Parent=Msa1118740-mRNA-1 |
| chr7_3 | exon | 67496469 | 67496977 | 67496469 | ID=Msa1118740-mRNA-1:exon:16636;Parent=Msa1118740-mRNA-1 |
| chr7_3 | exon | 67497315 | 67497514 | 67497315 | ID=Msa1118740-mRNA-1:exon:16635;Parent=Msa1118740-mRNA-1 |
| chr7_3 | exon | 67497600 | 67497814 | 67497600 | ID=Msa1118740-mRNA-1:exon:16634;Parent=Msa1118740-mRNA-1 |
| chr7_3 | exon | 67498694 | 67498881 | 67498694 | ID=Msa1118740-mRNA-1:exon:16633;Parent=Msa1118740-mRNA-1 |
| chr7_3 | five_prime_UTR | 67498807 | 67498881 | 67498807 | ID=Msa1118740-mRNA-1:five_prime_utr;Parent=Msa1118740-mRNA-1 |
| chr7_3 | CDS | 67498694 | 67498806 | 67498694 | ID=Msa1118740-mRNA-1:cds;Parent=Msa1118740-mRNA-1 |
| chr7_3 | CDS | 67497600 | 67497814 | 67497600 | ID=Msa1118740-mRNA-1:cds;Parent=Msa1118740-mRNA-1 |
| chr7_3 | CDS | 67497315 | 67497514 | 67497315 | ID=Msa1118740-mRNA-1:cds;Parent=Msa1118740-mRNA-1 |
| chr7_3 | CDS | 67496469 | 67496977 | 67496469 | ID=Msa1118740-mRNA-1:cds;Parent=Msa1118740-mRNA-1 |
| chr7_3 | CDS | 67495814 | 67496129 | 67495814 | ID=Msa1118740-mRNA-1:cds;Parent=Msa1118740-mRNA-1 |
| chr7_3 | three_prime_UTR | 67495549 | 67495813 | 67495549 | ID=Msa1118740-mRNA-1:three_prime_utr;Parent=Msa1118740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
