Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164370 | XP_013450265.1 | 89.256 | 242 | 10 | 4 | 1 | 226 | 216 | 457 | 7.06e-147 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164370 | sp|Q9SZA4|CDC21_ARATH | 74.274 | 241 | 47 | 3 | 1 | 226 | 217 | 457 | 1.46e-122 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164370 | A0A072U570 | 89.256 | 242 | 10 | 4 | 1 | 226 | 216 | 457 | 3.37e-147 | 427 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1123120 | Msa1164370 | 0.981549 | 7.330363e-153 | -8.615850e-47 |
| Msa1164370 | Msa1421790 | 0.983746 | 1.363935e-158 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164370 | MtrunA17_Chr7g0267961 | 89.256 | 242 | 10 | 4 | 1 | 226 | 216 | 457 | 6.50e-151 | 427 |
| Msa1164370 | MtrunA17_Chr5g0395821 | 72.199 | 241 | 52 | 3 | 1 | 226 | 214 | 454 | 5.86e-124 | 358 |
| Msa1164370 | MtrunA17_Chr3g0098921 | 70.248 | 242 | 56 | 4 | 1 | 226 | 218 | 459 | 5.71e-119 | 346 |
| Msa1164370 | MtrunA17_Chr7g0228191 | 76.211 | 227 | 37 | 4 | 1 | 210 | 103 | 329 | 1.63e-116 | 335 |
| Msa1164370 | MtrunA17_Chr7g0235181 | 71.193 | 243 | 48 | 7 | 1 | 226 | 189 | 426 | 8.92e-113 | 329 |
| Msa1164370 | MtrunA17_Chr7g0233651 | 67.220 | 241 | 55 | 4 | 1 | 226 | 200 | 431 | 3.83e-107 | 315 |
| Msa1164370 | MtrunA17_Chr7g0234591 | 68.724 | 243 | 56 | 5 | 1 | 226 | 197 | 436 | 5.92e-107 | 315 |
| Msa1164370 | MtrunA17_Chr2g0330601 | 62.771 | 231 | 46 | 6 | 7 | 224 | 166 | 369 | 2.50e-90 | 270 |
| Msa1164370 | MtrunA17_Chr2g0330681 | 65.241 | 187 | 39 | 6 | 7 | 180 | 196 | 369 | 4.51e-70 | 218 |
| Msa1164370 | MtrunA17_Chr3g0111961 | 48.372 | 215 | 95 | 4 | 1 | 203 | 255 | 465 | 2.08e-62 | 202 |
| Msa1164370 | MtrunA17_Chr2g0308501 | 47.222 | 216 | 96 | 5 | 7 | 205 | 99 | 313 | 2.26e-61 | 195 |
| Msa1164370 | MtrunA17_Chr4g0057131 | 45.370 | 216 | 102 | 4 | 1 | 204 | 244 | 455 | 1.44e-56 | 186 |
| Msa1164370 | MtrunA17_Chr1g0176241 | 28.502 | 207 | 130 | 9 | 1 | 198 | 284 | 481 | 3.15e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164370 | AT4G33270.1 | 74.274 | 241 | 47 | 3 | 1 | 226 | 217 | 457 | 1.48e-123 | 358 |
| Msa1164370 | AT4G33260.1 | 74.274 | 241 | 47 | 3 | 1 | 226 | 207 | 447 | 1.66e-118 | 345 |
| Msa1164370 | AT4G33260.2 | 72.321 | 224 | 47 | 3 | 1 | 209 | 207 | 430 | 3.76e-108 | 318 |
| Msa1164370 | AT5G27570.1 | 67.901 | 243 | 61 | 5 | 1 | 226 | 208 | 450 | 4.60e-107 | 316 |
| Msa1164370 | AT5G27945.1 | 66.942 | 242 | 64 | 4 | 1 | 226 | 187 | 428 | 4.74e-106 | 312 |
| Msa1164370 | AT5G27080.1 | 65.432 | 243 | 67 | 5 | 1 | 226 | 200 | 442 | 1.69e-102 | 304 |
| Msa1164370 | AT5G26900.1 | 65.289 | 242 | 68 | 4 | 1 | 226 | 203 | 444 | 9.45e-102 | 302 |
| Msa1164370 | AT5G13840.1 | 48.372 | 215 | 95 | 4 | 1 | 203 | 250 | 460 | 7.16e-63 | 203 |
| Msa1164370 | AT5G13840.2 | 48.372 | 215 | 95 | 4 | 1 | 203 | 250 | 460 | 7.16e-63 | 203 |
| Msa1164370 | AT4G22910.1 | 45.581 | 215 | 101 | 4 | 2 | 204 | 253 | 463 | 1.06e-58 | 192 |
| Msa1164370 | AT4G11920.1 | 45.370 | 216 | 102 | 4 | 1 | 204 | 244 | 455 | 2.20e-57 | 189 |
Find 69 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGAAACTCTTAGATTT+TGG | 0.143277 | 7_4:-56016946 | Msa1164370:CDS |
| GTGGCTTTGCATGCTTCTGC+TGG | 0.230906 | 7_4:+56016908 | None:intergenic |
| CCTTTGGAAGTATCCTTCTA+TGG | 0.254046 | 7_4:-56017056 | Msa1164370:CDS |
| CAGGGTAATCTACTGGCTTC+TGG | 0.309255 | 7_4:-56017235 | Msa1164370:CDS |
| GTATCCTTCTATGGTGAAAA+TGG | 0.311467 | 7_4:-56017047 | Msa1164370:CDS |
| AAGGGCTCATTATATGTCTT+TGG | 0.358151 | 7_4:+56016884 | None:intergenic |
| ACGATAATGTTGTTCACATA+TGG | 0.371186 | 7_4:-56017352 | Msa1164370:CDS |
| AATCTACTGGCTTCTGGTGG+AGG | 0.376592 | 7_4:-56017229 | Msa1164370:CDS |
| GTCATCATCTTCAACGAATA+CGG | 0.384451 | 7_4:+56016849 | None:intergenic |
| TTAGTAGCTCACGCTCATTC+TGG | 0.385492 | 7_4:+56017110 | None:intergenic |
| CACTTCGAGGGTGATGTATA+TGG | 0.388915 | 7_4:-56017008 | Msa1164370:CDS |
| GCACTGGCTTGGTGTCCCTC+AGG | 0.408143 | 7_4:-56017254 | Msa1164370:CDS |
| TGGCTTTGCATGCTTCTGCT+GGG | 0.422084 | 7_4:+56016909 | None:intergenic |
| CCGAGAACCAGCTTACCCTT+TGG | 0.427049 | 7_4:-56017072 | Msa1164370:CDS |
| CTCACATCGTTGAAACATAC+AGG | 0.428220 | 7_4:-56017442 | Msa1164370:CDS |
| CTACTGGCTTCTGGTGGAGG+TGG | 0.431389 | 7_4:-56017226 | Msa1164370:CDS |
| AACAATCATATTCTGACAAC+AGG | 0.439142 | 7_4:-56017509 | Msa1164370:CDS |
| CTGGCTTCTGGTGGAGGTGG+AGG | 0.440261 | 7_4:-56017223 | Msa1164370:CDS |
| CAAGAGTGGGTTCACTGTCT+TGG | 0.449748 | 7_4:-56017532 | Msa1164370:CDS |
| CGCAAGTATGTGCTCTGCTA+TGG | 0.473307 | 7_4:-56017135 | Msa1164370:CDS |
| CTCAAACCTGTGAAGACATC+GGG | 0.475694 | 7_4:+56017298 | None:intergenic |
| GATGCCACTGTACACCCATC+TGG | 0.480407 | 7_4:+56016977 | None:intergenic |
| ATCTCAACGGTCACACTTCG+AGG | 0.480528 | 7_4:-56017021 | Msa1164370:CDS |
| CCAAAGGGTAAGCTGGTTCT+CGG | 0.481991 | 7_4:+56017072 | None:intergenic |
| ACTGCAGCTAAGGGCAATGA+AGG | 0.483352 | 7_4:-56017567 | None:intergenic |
| CGATAATGTTGTTCACATAT+GGG | 0.487900 | 7_4:-56017351 | Msa1164370:CDS |
| TGTCCCTCAGGGTAATCTAC+TGG | 0.491265 | 7_4:-56017242 | Msa1164370:CDS |
| GATACTTCCAAAGGGTAAGC+TGG | 0.503616 | 7_4:+56017065 | None:intergenic |
| CACCTACCCGATGTCTTCAC+AGG | 0.510822 | 7_4:-56017304 | Msa1164370:intron |
| AACATACAGGGGACACAACC+AGG | 0.511067 | 7_4:-56017429 | Msa1164370:CDS |
| CTGCTGTGAAGGCACTGGCT+TGG | 0.516266 | 7_4:-56017265 | Msa1164370:intron |
| CTCATTATATGTCTTTGGTG+TGG | 0.516280 | 7_4:+56016889 | None:intergenic |
| TATTCTGACAACAGGAGGAA+TGG | 0.524698 | 7_4:-56017501 | Msa1164370:CDS |
| GGGCTCAAGTGGTCACCCTC+AGG | 0.528586 | 7_4:-56017398 | Msa1164370:intron |
| TCATCATCTTCAACGAATAC+GGG | 0.547121 | 7_4:+56016850 | None:intergenic |
| GGGTGGACACAGAGCAAGAG+TGG | 0.549117 | 7_4:-56017546 | Msa1164370:CDS |
| GGTAATCTACTGGCTTCTGG+TGG | 0.565300 | 7_4:-56017232 | Msa1164370:CDS |
| TATATGGCGCAAAGTCCAGA+TGG | 0.565373 | 7_4:-56016992 | Msa1164370:CDS |
| CGTGAGCTACTAAGCTCACA+TGG | 0.568122 | 7_4:-56017100 | Msa1164370:CDS |
| CTGACAACAGGAGGAATGGA+TGG | 0.572412 | 7_4:-56017497 | Msa1164370:CDS |
| CACTGGCTTGGTGTCCCTCA+GGG | 0.575364 | 7_4:-56017253 | Msa1164370:CDS |
| CATAGAAGGATACTTCCAAA+GGG | 0.584766 | 7_4:+56017057 | None:intergenic |
| CCTCAAACCTGTGAAGACAT+CGG | 0.590741 | 7_4:+56017297 | None:intergenic |
| TCACATATGGGATAGATCTG+TGG | 0.596581 | 7_4:-56017339 | Msa1164370:CDS |
| AGATTGAATTCAGTTGACAC+TGG | 0.597762 | 7_4:-56017160 | Msa1164370:CDS |
| GGACAACAATTGTCAAGTGG+TGG | 0.599505 | 7_4:-56017377 | Msa1164370:CDS |
| ATACGGGTGAAATTAGCAAA+GGG | 0.600657 | 7_4:+56016866 | None:intergenic |
| TCTCAACGGTCACACTTCGA+GGG | 0.613321 | 7_4:-56017020 | Msa1164370:CDS |
| GTGAAAATGGCAGATCTCAA+CGG | 0.613838 | 7_4:-56017034 | Msa1164370:CDS |
| AATACGGGTGAAATTAGCAA+AGG | 0.619999 | 7_4:+56016865 | None:intergenic |
| CAGCTAAGGGCAATGAAGGG+TGG | 0.622963 | 7_4:-56017563 | Msa1164370:CDS |
| CCATAGAAGGATACTTCCAA+AGG | 0.623454 | 7_4:+56017056 | None:intergenic |
| AAGCTGTGGAACACACACAC+TGG | 0.630912 | 7_4:-56017187 | Msa1164370:CDS |
| GTGATCATTGCATTAAGCTG+TGG | 0.635919 | 7_4:-56017201 | Msa1164370:CDS |
| AATCATATTCTGACAACAGG+AGG | 0.641326 | 7_4:-56017506 | Msa1164370:CDS |
| ACTTGACAATTGTTGTCCTG+AGG | 0.654097 | 7_4:+56017382 | None:intergenic |
| TCACATCGTTGAAACATACA+GGG | 0.656486 | 7_4:-56017441 | Msa1164370:CDS |
| CTTGACAATTGTTGTCCTGA+GGG | 0.657303 | 7_4:+56017383 | None:intergenic |
| AAGCCAGTAGATTACCCTGA+GGG | 0.662555 | 7_4:+56017239 | None:intergenic |
| TCAGGACAACAATTGTCAAG+TGG | 0.664718 | 7_4:-56017380 | Msa1164370:CDS |
| TGGGTGTACAGTGGCATCTG+CGG | 0.666837 | 7_4:-56016972 | Msa1164370:CDS |
| CTGCAGCTAAGGGCAATGAA+GGG | 0.668716 | 7_4:-56017566 | None:intergenic |
| GGTGGACACAGAGCAAGAGT+GGG | 0.681424 | 7_4:-56017545 | Msa1164370:CDS |
| AAGTCCAGATGGGTGTACAG+TGG | 0.686450 | 7_4:-56016981 | Msa1164370:CDS |
| ATATGGCGCAAAGTCCAGAT+GGG | 0.692355 | 7_4:-56016991 | Msa1164370:CDS |
| AACCTGTGAAGACATCGGGT+AGG | 0.717836 | 7_4:+56017302 | None:intergenic |
| CACATCGTTGAAACATACAG+GGG | 0.758385 | 7_4:-56017440 | Msa1164370:CDS |
| GAAGCCAGTAGATTACCCTG+AGG | 0.773885 | 7_4:+56017238 | None:intergenic |
| ATACAGGGGACACAACCAGG+AGG | 0.774768 | 7_4:-56017426 | Msa1164370:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGATTTTGGAATGTCTTT+GGG | - | chr7_4:56017485-56017504 | Msa1164370:CDS | 25.0% |
| AACAATCATATTCTGACAAC+AGG | - | chr7_4:56016910-56016929 | Msa1164370:CDS | 30.0% | |
| ACGATAATGTTGTTCACATA+TGG | - | chr7_4:56017067-56017086 | Msa1164370:CDS | 30.0% | |
| CGATAATGTTGTTCACATAT+GGG | - | chr7_4:56017068-56017087 | Msa1164370:CDS | 30.0% | |
| ! | CAGATGAAACTCTTAGATTT+TGG | - | chr7_4:56017473-56017492 | Msa1164370:CDS | 30.0% |
| !!! | CTTAGATTTTGGAATGTCTT+TGG | - | chr7_4:56017484-56017503 | Msa1164370:CDS | 30.0% |
| AATCATATTCTGACAACAGG+AGG | - | chr7_4:56016913-56016932 | Msa1164370:CDS | 35.0% | |
| TCACATCGTTGAAACATACA+GGG | - | chr7_4:56016978-56016997 | Msa1164370:CDS | 35.0% | |
| AGATTGAATTCAGTTGACAC+TGG | - | chr7_4:56017259-56017278 | Msa1164370:intron | 35.0% | |
| CATAGAAGGATACTTCCAAA+GGG | + | chr7_4:56017365-56017384 | None:intergenic | 35.0% | |
| GTATCCTTCTATGGTGAAAA+TGG | - | chr7_4:56017372-56017391 | Msa1164370:CDS | 35.0% | |
| CTCATTATATGTCTTTGGTG+TGG | + | chr7_4:56017533-56017552 | None:intergenic | 35.0% | |
| AAGGGCTCATTATATGTCTT+TGG | + | chr7_4:56017538-56017557 | None:intergenic | 35.0% | |
| ATACGGGTGAAATTAGCAAA+GGG | + | chr7_4:56017556-56017575 | None:intergenic | 35.0% | |
| AATACGGGTGAAATTAGCAA+AGG | + | chr7_4:56017557-56017576 | None:intergenic | 35.0% | |
| TATTCTGACAACAGGAGGAA+TGG | - | chr7_4:56016918-56016937 | Msa1164370:CDS | 40.0% | |
| CTCACATCGTTGAAACATAC+AGG | - | chr7_4:56016977-56016996 | Msa1164370:CDS | 40.0% | |
| CACATCGTTGAAACATACAG+GGG | - | chr7_4:56016979-56016998 | Msa1164370:CDS | 40.0% | |
| CTTGACAATTGTTGTCCTGA+GGG | + | chr7_4:56017039-56017058 | None:intergenic | 40.0% | |
| ACTTGACAATTGTTGTCCTG+AGG | + | chr7_4:56017040-56017059 | None:intergenic | 40.0% | |
| TCAGGACAACAATTGTCAAG+TGG | - | chr7_4:56017039-56017058 | Msa1164370:CDS | 40.0% | |
| TCACATATGGGATAGATCTG+TGG | - | chr7_4:56017080-56017099 | Msa1164370:CDS | 40.0% | |
| GTGATCATTGCATTAAGCTG+TGG | - | chr7_4:56017218-56017237 | Msa1164370:CDS | 40.0% | |
| CCATAGAAGGATACTTCCAA+AGG | + | chr7_4:56017366-56017385 | None:intergenic | 40.0% | |
| !! | CCTTTGGAAGTATCCTTCTA+TGG | - | chr7_4:56017363-56017382 | Msa1164370:CDS | 40.0% |
| !!! | TCTGCCATTTTCACCATAGA+AGG | + | chr7_4:56017379-56017398 | None:intergenic | 40.0% |
| GTGAAAATGGCAGATCTCAA+CGG | - | chr7_4:56017385-56017404 | Msa1164370:CDS | 40.0% | |
| GGACAACAATTGTCAAGTGG+TGG | - | chr7_4:56017042-56017061 | Msa1164370:CDS | 45.0% | |
| CTCAAACCTGTGAAGACATC+GGG | + | chr7_4:56017124-56017143 | None:intergenic | 45.0% | |
| CCTCAAACCTGTGAAGACAT+CGG | + | chr7_4:56017125-56017144 | None:intergenic | 45.0% | |
| AAGCCAGTAGATTACCCTGA+GGG | + | chr7_4:56017183-56017202 | None:intergenic | 45.0% | |
| TTAGTAGCTCACGCTCATTC+TGG | + | chr7_4:56017312-56017331 | None:intergenic | 45.0% | |
| GATACTTCCAAAGGGTAAGC+TGG | + | chr7_4:56017357-56017376 | None:intergenic | 45.0% | |
| CACTTCGAGGGTGATGTATA+TGG | - | chr7_4:56017411-56017430 | Msa1164370:intron | 45.0% | |
| TATATGGCGCAAAGTCCAGA+TGG | - | chr7_4:56017427-56017446 | Msa1164370:CDS | 45.0% | |
| ATATGGCGCAAAGTCCAGAT+GGG | - | chr7_4:56017428-56017447 | Msa1164370:CDS | 45.0% | |
| ! | CAAGAGTGGGTTCACTGTCT+TGG | - | chr7_4:56016887-56016906 | Msa1164370:CDS | 50.0% |
| CTGACAACAGGAGGAATGGA+TGG | - | chr7_4:56016922-56016941 | Msa1164370:CDS | 50.0% | |
| AACATACAGGGGACACAACC+AGG | - | chr7_4:56016990-56017009 | Msa1164370:CDS | 50.0% | |
| GACACAACCAGGAGGTTTGT+GGG | - | chr7_4:56017001-56017020 | Msa1164370:CDS | 50.0% | |
| AACCTGTGAAGACATCGGGT+AGG | + | chr7_4:56017120-56017139 | None:intergenic | 50.0% | |
| CCGATGTCTTCACAGGTTTG+AGG | - | chr7_4:56017122-56017141 | Msa1164370:CDS | 50.0% | |
| GGAACACATAGCTGCTGTGA+AGG | - | chr7_4:56017143-56017162 | Msa1164370:CDS | 50.0% | |
| TGTCCCTCAGGGTAATCTAC+TGG | - | chr7_4:56017177-56017196 | Msa1164370:CDS | 50.0% | |
| GAAGCCAGTAGATTACCCTG+AGG | + | chr7_4:56017184-56017203 | None:intergenic | 50.0% | |
| !! | CAGGGTAATCTACTGGCTTC+TGG | - | chr7_4:56017184-56017203 | Msa1164370:CDS | 50.0% |
| !! | GGTAATCTACTGGCTTCTGG+TGG | - | chr7_4:56017187-56017206 | Msa1164370:CDS | 50.0% |
| !! | AATCTACTGGCTTCTGGTGG+AGG | - | chr7_4:56017190-56017209 | Msa1164370:CDS | 50.0% |
| AAGCTGTGGAACACACACAC+TGG | - | chr7_4:56017232-56017251 | Msa1164370:CDS | 50.0% | |
| CGCAAGTATGTGCTCTGCTA+TGG | - | chr7_4:56017284-56017303 | Msa1164370:intron | 50.0% | |
| CGTGAGCTACTAAGCTCACA+TGG | - | chr7_4:56017319-56017338 | Msa1164370:CDS | 50.0% | |
| ! | CCAAAGGGTAAGCTGGTTCT+CGG | + | chr7_4:56017350-56017369 | None:intergenic | 50.0% |
| ATCTCAACGGTCACACTTCG+AGG | - | chr7_4:56017398-56017417 | Msa1164370:intron | 50.0% | |
| TCTCAACGGTCACACTTCGA+GGG | - | chr7_4:56017399-56017418 | Msa1164370:intron | 50.0% | |
| AAGTCCAGATGGGTGTACAG+TGG | - | chr7_4:56017438-56017457 | Msa1164370:CDS | 50.0% | |
| ! | TGGCTTTGCATGCTTCTGCT+GGG | + | chr7_4:56017513-56017532 | None:intergenic | 50.0% |
| GGTGGACACAGAGCAAGAGT+GGG | - | chr7_4:56016874-56016893 | Msa1164370:CDS | 55.0% | |
| ATACAGGGGACACAACCAGG+AGG | - | chr7_4:56016993-56017012 | Msa1164370:CDS | 55.0% | |
| GGACACAACCAGGAGGTTTG+TGG | - | chr7_4:56017000-56017019 | Msa1164370:CDS | 55.0% | |
| ACTTGAGCCCACAAACCTCC+TGG | + | chr7_4:56017011-56017030 | None:intergenic | 55.0% | |
| AGGAGGTTTGTGGGCTCAAG+TGG | - | chr7_4:56017010-56017029 | Msa1164370:CDS | 55.0% | |
| CACCTACCCGATGTCTTCAC+AGG | - | chr7_4:56017115-56017134 | Msa1164370:CDS | 55.0% | |
| ! | CATAGCTGCTGTGAAGGCAC+TGG | - | chr7_4:56017149-56017168 | Msa1164370:CDS | 55.0% |
| CCGAGAACCAGCTTACCCTT+TGG | - | chr7_4:56017347-56017366 | Msa1164370:CDS | 55.0% | |
| GATGCCACTGTACACCCATC+TGG | + | chr7_4:56017445-56017464 | None:intergenic | 55.0% | |
| TGGGTGTACAGTGGCATCTG+CGG | - | chr7_4:56017447-56017466 | Msa1164370:CDS | 55.0% | |
| ! | GTGGCTTTGCATGCTTCTGC+TGG | + | chr7_4:56017514-56017533 | None:intergenic | 55.0% |
| GGGTGGACACAGAGCAAGAG+TGG | - | chr7_4:56016873-56016892 | Msa1164370:CDS | 60.0% | |
| !! | CTGCTGTGAAGGCACTGGCT+TGG | - | chr7_4:56017154-56017173 | Msa1164370:CDS | 60.0% |
| !! | CACTGGCTTGGTGTCCCTCA+GGG | - | chr7_4:56017166-56017185 | Msa1164370:CDS | 60.0% |
| !! | CTACTGGCTTCTGGTGGAGG+TGG | - | chr7_4:56017193-56017212 | Msa1164370:CDS | 60.0% |
| GGGCTCAAGTGGTCACCCTC+AGG | - | chr7_4:56017021-56017040 | Msa1164370:CDS | 65.0% | |
| !! | GCACTGGCTTGGTGTCCCTC+AGG | - | chr7_4:56017165-56017184 | Msa1164370:CDS | 65.0% |
| CTGGCTTCTGGTGGAGGTGG+AGG | - | chr7_4:56017196-56017215 | Msa1164370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 56016859 | 56017582 | 56016859 | ID=Msa1164370;Name=Msa1164370 |
| chr7_4 | mRNA | 56016859 | 56017582 | 56016859 | ID=Msa1164370-mRNA-1;Parent=Msa1164370;Name=Msa1164370-mRNA-1;_AED=0.03;_eAED=0.06;_QI=0|0|0|1|0|0.33|3|0|226 |
| chr7_4 | exon | 56017427 | 56017582 | 56017427 | ID=Msa1164370-mRNA-1:exon:16594;Parent=Msa1164370-mRNA-1 |
| chr7_4 | exon | 56017305 | 56017411 | 56017305 | ID=Msa1164370-mRNA-1:exon:16593;Parent=Msa1164370-mRNA-1 |
| chr7_4 | exon | 56016859 | 56017276 | 56016859 | ID=Msa1164370-mRNA-1:exon:16592;Parent=Msa1164370-mRNA-1 |
| chr7_4 | CDS | 56017427 | 56017582 | 56017427 | ID=Msa1164370-mRNA-1:cds;Parent=Msa1164370-mRNA-1 |
| chr7_4 | CDS | 56017305 | 56017411 | 56017305 | ID=Msa1164370-mRNA-1:cds;Parent=Msa1164370-mRNA-1 |
| chr7_4 | CDS | 56016859 | 56017276 | 56016859 | ID=Msa1164370-mRNA-1:cds;Parent=Msa1164370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
