Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123120 | XP_013450265.1 | 89.256 | 242 | 10 | 4 | 1 | 226 | 216 | 457 | 7.06e-147 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123120 | sp|Q9SZA4|CDC21_ARATH | 74.274 | 241 | 47 | 3 | 1 | 226 | 217 | 457 | 1.46e-122 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123120 | A0A072U570 | 89.256 | 242 | 10 | 4 | 1 | 226 | 216 | 457 | 3.37e-147 | 427 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1037130 | Msa1123120 | 0.807445 | 5.036522e-50 | -8.615850e-47 |
| Msa1123120 | Msa1164370 | 0.981549 | 7.330363e-153 | -8.615850e-47 |
| Msa1123120 | Msa1421790 | 0.996377 | 9.378936e-227 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123120 | MtrunA17_Chr7g0267961 | 89.256 | 242 | 10 | 4 | 1 | 226 | 216 | 457 | 6.50e-151 | 427 |
| Msa1123120 | MtrunA17_Chr5g0395821 | 72.199 | 241 | 52 | 3 | 1 | 226 | 214 | 454 | 5.86e-124 | 358 |
| Msa1123120 | MtrunA17_Chr3g0098921 | 70.248 | 242 | 56 | 4 | 1 | 226 | 218 | 459 | 5.71e-119 | 346 |
| Msa1123120 | MtrunA17_Chr7g0228191 | 76.211 | 227 | 37 | 4 | 1 | 210 | 103 | 329 | 1.63e-116 | 335 |
| Msa1123120 | MtrunA17_Chr7g0235181 | 71.193 | 243 | 48 | 7 | 1 | 226 | 189 | 426 | 8.92e-113 | 329 |
| Msa1123120 | MtrunA17_Chr7g0233651 | 67.220 | 241 | 55 | 4 | 1 | 226 | 200 | 431 | 3.83e-107 | 315 |
| Msa1123120 | MtrunA17_Chr7g0234591 | 68.724 | 243 | 56 | 5 | 1 | 226 | 197 | 436 | 5.92e-107 | 315 |
| Msa1123120 | MtrunA17_Chr2g0330601 | 62.771 | 231 | 46 | 6 | 7 | 224 | 166 | 369 | 2.50e-90 | 270 |
| Msa1123120 | MtrunA17_Chr2g0330681 | 65.241 | 187 | 39 | 6 | 7 | 180 | 196 | 369 | 4.51e-70 | 218 |
| Msa1123120 | MtrunA17_Chr3g0111961 | 48.372 | 215 | 95 | 4 | 1 | 203 | 255 | 465 | 2.08e-62 | 202 |
| Msa1123120 | MtrunA17_Chr2g0308501 | 47.222 | 216 | 96 | 5 | 7 | 205 | 99 | 313 | 2.26e-61 | 195 |
| Msa1123120 | MtrunA17_Chr4g0057131 | 45.370 | 216 | 102 | 4 | 1 | 204 | 244 | 455 | 1.44e-56 | 186 |
| Msa1123120 | MtrunA17_Chr1g0176241 | 28.502 | 207 | 130 | 9 | 1 | 198 | 284 | 481 | 3.15e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123120 | AT4G33270.1 | 74.274 | 241 | 47 | 3 | 1 | 226 | 217 | 457 | 1.48e-123 | 358 |
| Msa1123120 | AT4G33260.1 | 74.274 | 241 | 47 | 3 | 1 | 226 | 207 | 447 | 1.66e-118 | 345 |
| Msa1123120 | AT4G33260.2 | 72.321 | 224 | 47 | 3 | 1 | 209 | 207 | 430 | 3.76e-108 | 318 |
| Msa1123120 | AT5G27570.1 | 67.901 | 243 | 61 | 5 | 1 | 226 | 208 | 450 | 4.60e-107 | 316 |
| Msa1123120 | AT5G27945.1 | 66.942 | 242 | 64 | 4 | 1 | 226 | 187 | 428 | 4.74e-106 | 312 |
| Msa1123120 | AT5G27080.1 | 65.432 | 243 | 67 | 5 | 1 | 226 | 200 | 442 | 1.69e-102 | 304 |
| Msa1123120 | AT5G26900.1 | 65.289 | 242 | 68 | 4 | 1 | 226 | 203 | 444 | 9.45e-102 | 302 |
| Msa1123120 | AT5G13840.1 | 48.372 | 215 | 95 | 4 | 1 | 203 | 250 | 460 | 7.16e-63 | 203 |
| Msa1123120 | AT5G13840.2 | 48.372 | 215 | 95 | 4 | 1 | 203 | 250 | 460 | 7.16e-63 | 203 |
| Msa1123120 | AT4G22910.1 | 45.581 | 215 | 101 | 4 | 2 | 204 | 253 | 463 | 1.06e-58 | 192 |
| Msa1123120 | AT4G11920.1 | 45.370 | 216 | 102 | 4 | 1 | 204 | 244 | 455 | 2.20e-57 | 189 |
Find 69 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGAAACTCTTAGATTT+TGG | 0.143277 | 7_3:-73867597 | Msa1123120:CDS |
| GTGGCTTTGCATGCTTCTGC+TGG | 0.230906 | 7_3:+73867559 | None:intergenic |
| CCTTTGGAAGTATCCTTCTA+TGG | 0.254046 | 7_3:-73867707 | Msa1123120:CDS |
| CAGGGTAATCTACTGGCTTC+TGG | 0.309255 | 7_3:-73867886 | Msa1123120:CDS |
| GTATCCTTCTATGGTGAAAA+TGG | 0.311467 | 7_3:-73867698 | Msa1123120:CDS |
| AAGGGCTCATTATATGTCTT+TGG | 0.358151 | 7_3:+73867535 | None:intergenic |
| ACGATAATGTTGTTCACATA+TGG | 0.371186 | 7_3:-73868003 | Msa1123120:CDS |
| AATCTACTGGCTTCTGGTGG+AGG | 0.376592 | 7_3:-73867880 | Msa1123120:CDS |
| GTCATCATCTTCAACGAATA+CGG | 0.384451 | 7_3:+73867500 | None:intergenic |
| TTAGTAGCTCACGCTCATTC+TGG | 0.385492 | 7_3:+73867761 | None:intergenic |
| CACTTCGAGGGTGATGTATA+TGG | 0.388915 | 7_3:-73867659 | Msa1123120:CDS |
| GCACTGGCTTGGTGTCCCTC+AGG | 0.408143 | 7_3:-73867905 | Msa1123120:CDS |
| TGGCTTTGCATGCTTCTGCT+GGG | 0.422084 | 7_3:+73867560 | None:intergenic |
| CCGAGAACCAGCTTACCCTT+TGG | 0.427049 | 7_3:-73867723 | Msa1123120:CDS |
| CTCACATCGTTGAAACATAC+AGG | 0.428220 | 7_3:-73868093 | Msa1123120:CDS |
| CTACTGGCTTCTGGTGGAGG+TGG | 0.431389 | 7_3:-73867877 | Msa1123120:CDS |
| AACAATCATATTCTGACAAC+AGG | 0.439142 | 7_3:-73868160 | Msa1123120:CDS |
| CTGGCTTCTGGTGGAGGTGG+AGG | 0.440261 | 7_3:-73867874 | Msa1123120:CDS |
| CAAGAGTGGGTTCACTGTCT+TGG | 0.449748 | 7_3:-73868183 | Msa1123120:CDS |
| CGCAAGTATGTGCTCTGCTA+TGG | 0.473307 | 7_3:-73867786 | Msa1123120:CDS |
| CTCAAACCTGTGAAGACATC+GGG | 0.475694 | 7_3:+73867949 | None:intergenic |
| GATGCCACTGTACACCCATC+TGG | 0.480407 | 7_3:+73867628 | None:intergenic |
| ATCTCAACGGTCACACTTCG+AGG | 0.480528 | 7_3:-73867672 | Msa1123120:CDS |
| CCAAAGGGTAAGCTGGTTCT+CGG | 0.481991 | 7_3:+73867723 | None:intergenic |
| ACTGCAGCTAAGGGCAATGA+AGG | 0.483352 | 7_3:-73868218 | None:intergenic |
| CGATAATGTTGTTCACATAT+GGG | 0.487900 | 7_3:-73868002 | Msa1123120:CDS |
| TGTCCCTCAGGGTAATCTAC+TGG | 0.491265 | 7_3:-73867893 | Msa1123120:CDS |
| GATACTTCCAAAGGGTAAGC+TGG | 0.503616 | 7_3:+73867716 | None:intergenic |
| CACCTACCCGATGTCTTCAC+AGG | 0.510822 | 7_3:-73867955 | Msa1123120:intron |
| AACATACAGGGGACACAACC+AGG | 0.511067 | 7_3:-73868080 | Msa1123120:CDS |
| CTGCTGTGAAGGCACTGGCT+TGG | 0.516266 | 7_3:-73867916 | Msa1123120:intron |
| CTCATTATATGTCTTTGGTG+TGG | 0.516280 | 7_3:+73867540 | None:intergenic |
| TATTCTGACAACAGGAGGAA+TGG | 0.524698 | 7_3:-73868152 | Msa1123120:CDS |
| GGGCTCAAGTGGTCACCCTC+AGG | 0.528586 | 7_3:-73868049 | Msa1123120:intron |
| TCATCATCTTCAACGAATAC+GGG | 0.547121 | 7_3:+73867501 | None:intergenic |
| GGGTGGACACAGAGCAAGAG+TGG | 0.549117 | 7_3:-73868197 | Msa1123120:CDS |
| GGTAATCTACTGGCTTCTGG+TGG | 0.565300 | 7_3:-73867883 | Msa1123120:CDS |
| TATATGGCGCAAAGTCCAGA+TGG | 0.565373 | 7_3:-73867643 | Msa1123120:CDS |
| CGTGAGCTACTAAGCTCACA+TGG | 0.568122 | 7_3:-73867751 | Msa1123120:CDS |
| CTGACAACAGGAGGAATGGA+TGG | 0.572412 | 7_3:-73868148 | Msa1123120:CDS |
| CACTGGCTTGGTGTCCCTCA+GGG | 0.575364 | 7_3:-73867904 | Msa1123120:CDS |
| CATAGAAGGATACTTCCAAA+GGG | 0.584766 | 7_3:+73867708 | None:intergenic |
| CCTCAAACCTGTGAAGACAT+CGG | 0.590741 | 7_3:+73867948 | None:intergenic |
| TCACATATGGGATAGATCTG+TGG | 0.596581 | 7_3:-73867990 | Msa1123120:CDS |
| AGATTGAATTCAGTTGACAC+TGG | 0.597762 | 7_3:-73867811 | Msa1123120:CDS |
| GGACAACAATTGTCAAGTGG+TGG | 0.599505 | 7_3:-73868028 | Msa1123120:CDS |
| ATACGGGTGAAATTAGCAAA+GGG | 0.600657 | 7_3:+73867517 | None:intergenic |
| TCTCAACGGTCACACTTCGA+GGG | 0.613321 | 7_3:-73867671 | Msa1123120:CDS |
| GTGAAAATGGCAGATCTCAA+CGG | 0.613838 | 7_3:-73867685 | Msa1123120:CDS |
| AATACGGGTGAAATTAGCAA+AGG | 0.619999 | 7_3:+73867516 | None:intergenic |
| CAGCTAAGGGCAATGAAGGG+TGG | 0.622963 | 7_3:-73868214 | Msa1123120:CDS |
| CCATAGAAGGATACTTCCAA+AGG | 0.623454 | 7_3:+73867707 | None:intergenic |
| AAGCTGTGGAACACACACAC+TGG | 0.630912 | 7_3:-73867838 | Msa1123120:CDS |
| GTGATCATTGCATTAAGCTG+TGG | 0.635919 | 7_3:-73867852 | Msa1123120:CDS |
| AATCATATTCTGACAACAGG+AGG | 0.641326 | 7_3:-73868157 | Msa1123120:CDS |
| ACTTGACAATTGTTGTCCTG+AGG | 0.654097 | 7_3:+73868033 | None:intergenic |
| TCACATCGTTGAAACATACA+GGG | 0.656486 | 7_3:-73868092 | Msa1123120:CDS |
| CTTGACAATTGTTGTCCTGA+GGG | 0.657303 | 7_3:+73868034 | None:intergenic |
| AAGCCAGTAGATTACCCTGA+GGG | 0.662555 | 7_3:+73867890 | None:intergenic |
| TCAGGACAACAATTGTCAAG+TGG | 0.664718 | 7_3:-73868031 | Msa1123120:CDS |
| TGGGTGTACAGTGGCATCTG+CGG | 0.666837 | 7_3:-73867623 | Msa1123120:CDS |
| CTGCAGCTAAGGGCAATGAA+GGG | 0.668716 | 7_3:-73868217 | None:intergenic |
| GGTGGACACAGAGCAAGAGT+GGG | 0.681424 | 7_3:-73868196 | Msa1123120:CDS |
| AAGTCCAGATGGGTGTACAG+TGG | 0.686450 | 7_3:-73867632 | Msa1123120:CDS |
| ATATGGCGCAAAGTCCAGAT+GGG | 0.692355 | 7_3:-73867642 | Msa1123120:CDS |
| AACCTGTGAAGACATCGGGT+AGG | 0.717836 | 7_3:+73867953 | None:intergenic |
| CACATCGTTGAAACATACAG+GGG | 0.758385 | 7_3:-73868091 | Msa1123120:CDS |
| GAAGCCAGTAGATTACCCTG+AGG | 0.773885 | 7_3:+73867889 | None:intergenic |
| ATACAGGGGACACAACCAGG+AGG | 0.774768 | 7_3:-73868077 | Msa1123120:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGATTTTGGAATGTCTTT+GGG | - | chr7_3:73868136-73868155 | Msa1123120:CDS | 25.0% |
| AACAATCATATTCTGACAAC+AGG | - | chr7_3:73867561-73867580 | Msa1123120:CDS | 30.0% | |
| ACGATAATGTTGTTCACATA+TGG | - | chr7_3:73867718-73867737 | Msa1123120:CDS | 30.0% | |
| CGATAATGTTGTTCACATAT+GGG | - | chr7_3:73867719-73867738 | Msa1123120:CDS | 30.0% | |
| ! | CAGATGAAACTCTTAGATTT+TGG | - | chr7_3:73868124-73868143 | Msa1123120:CDS | 30.0% |
| !!! | CTTAGATTTTGGAATGTCTT+TGG | - | chr7_3:73868135-73868154 | Msa1123120:CDS | 30.0% |
| AATCATATTCTGACAACAGG+AGG | - | chr7_3:73867564-73867583 | Msa1123120:CDS | 35.0% | |
| TCACATCGTTGAAACATACA+GGG | - | chr7_3:73867629-73867648 | Msa1123120:CDS | 35.0% | |
| AGATTGAATTCAGTTGACAC+TGG | - | chr7_3:73867910-73867929 | Msa1123120:intron | 35.0% | |
| CATAGAAGGATACTTCCAAA+GGG | + | chr7_3:73868016-73868035 | None:intergenic | 35.0% | |
| GTATCCTTCTATGGTGAAAA+TGG | - | chr7_3:73868023-73868042 | Msa1123120:CDS | 35.0% | |
| CTCATTATATGTCTTTGGTG+TGG | + | chr7_3:73868184-73868203 | None:intergenic | 35.0% | |
| AAGGGCTCATTATATGTCTT+TGG | + | chr7_3:73868189-73868208 | None:intergenic | 35.0% | |
| ATACGGGTGAAATTAGCAAA+GGG | + | chr7_3:73868207-73868226 | None:intergenic | 35.0% | |
| AATACGGGTGAAATTAGCAA+AGG | + | chr7_3:73868208-73868227 | None:intergenic | 35.0% | |
| TATTCTGACAACAGGAGGAA+TGG | - | chr7_3:73867569-73867588 | Msa1123120:CDS | 40.0% | |
| CTCACATCGTTGAAACATAC+AGG | - | chr7_3:73867628-73867647 | Msa1123120:CDS | 40.0% | |
| CACATCGTTGAAACATACAG+GGG | - | chr7_3:73867630-73867649 | Msa1123120:CDS | 40.0% | |
| CTTGACAATTGTTGTCCTGA+GGG | + | chr7_3:73867690-73867709 | None:intergenic | 40.0% | |
| ACTTGACAATTGTTGTCCTG+AGG | + | chr7_3:73867691-73867710 | None:intergenic | 40.0% | |
| TCAGGACAACAATTGTCAAG+TGG | - | chr7_3:73867690-73867709 | Msa1123120:CDS | 40.0% | |
| TCACATATGGGATAGATCTG+TGG | - | chr7_3:73867731-73867750 | Msa1123120:CDS | 40.0% | |
| GTGATCATTGCATTAAGCTG+TGG | - | chr7_3:73867869-73867888 | Msa1123120:CDS | 40.0% | |
| CCATAGAAGGATACTTCCAA+AGG | + | chr7_3:73868017-73868036 | None:intergenic | 40.0% | |
| !! | CCTTTGGAAGTATCCTTCTA+TGG | - | chr7_3:73868014-73868033 | Msa1123120:CDS | 40.0% |
| !!! | TCTGCCATTTTCACCATAGA+AGG | + | chr7_3:73868030-73868049 | None:intergenic | 40.0% |
| GTGAAAATGGCAGATCTCAA+CGG | - | chr7_3:73868036-73868055 | Msa1123120:CDS | 40.0% | |
| GGACAACAATTGTCAAGTGG+TGG | - | chr7_3:73867693-73867712 | Msa1123120:CDS | 45.0% | |
| CTCAAACCTGTGAAGACATC+GGG | + | chr7_3:73867775-73867794 | None:intergenic | 45.0% | |
| CCTCAAACCTGTGAAGACAT+CGG | + | chr7_3:73867776-73867795 | None:intergenic | 45.0% | |
| AAGCCAGTAGATTACCCTGA+GGG | + | chr7_3:73867834-73867853 | None:intergenic | 45.0% | |
| TTAGTAGCTCACGCTCATTC+TGG | + | chr7_3:73867963-73867982 | None:intergenic | 45.0% | |
| GATACTTCCAAAGGGTAAGC+TGG | + | chr7_3:73868008-73868027 | None:intergenic | 45.0% | |
| CACTTCGAGGGTGATGTATA+TGG | - | chr7_3:73868062-73868081 | Msa1123120:intron | 45.0% | |
| TATATGGCGCAAAGTCCAGA+TGG | - | chr7_3:73868078-73868097 | Msa1123120:CDS | 45.0% | |
| ATATGGCGCAAAGTCCAGAT+GGG | - | chr7_3:73868079-73868098 | Msa1123120:CDS | 45.0% | |
| ! | CAAGAGTGGGTTCACTGTCT+TGG | - | chr7_3:73867538-73867557 | Msa1123120:CDS | 50.0% |
| CTGACAACAGGAGGAATGGA+TGG | - | chr7_3:73867573-73867592 | Msa1123120:CDS | 50.0% | |
| AACATACAGGGGACACAACC+AGG | - | chr7_3:73867641-73867660 | Msa1123120:CDS | 50.0% | |
| GACACAACCAGGAGGTTTGT+GGG | - | chr7_3:73867652-73867671 | Msa1123120:CDS | 50.0% | |
| AACCTGTGAAGACATCGGGT+AGG | + | chr7_3:73867771-73867790 | None:intergenic | 50.0% | |
| CCGATGTCTTCACAGGTTTG+AGG | - | chr7_3:73867773-73867792 | Msa1123120:CDS | 50.0% | |
| GGAACACATAGCTGCTGTGA+AGG | - | chr7_3:73867794-73867813 | Msa1123120:CDS | 50.0% | |
| TGTCCCTCAGGGTAATCTAC+TGG | - | chr7_3:73867828-73867847 | Msa1123120:CDS | 50.0% | |
| GAAGCCAGTAGATTACCCTG+AGG | + | chr7_3:73867835-73867854 | None:intergenic | 50.0% | |
| !! | CAGGGTAATCTACTGGCTTC+TGG | - | chr7_3:73867835-73867854 | Msa1123120:CDS | 50.0% |
| !! | GGTAATCTACTGGCTTCTGG+TGG | - | chr7_3:73867838-73867857 | Msa1123120:CDS | 50.0% |
| !! | AATCTACTGGCTTCTGGTGG+AGG | - | chr7_3:73867841-73867860 | Msa1123120:CDS | 50.0% |
| AAGCTGTGGAACACACACAC+TGG | - | chr7_3:73867883-73867902 | Msa1123120:CDS | 50.0% | |
| CGCAAGTATGTGCTCTGCTA+TGG | - | chr7_3:73867935-73867954 | Msa1123120:intron | 50.0% | |
| CGTGAGCTACTAAGCTCACA+TGG | - | chr7_3:73867970-73867989 | Msa1123120:CDS | 50.0% | |
| ! | CCAAAGGGTAAGCTGGTTCT+CGG | + | chr7_3:73868001-73868020 | None:intergenic | 50.0% |
| ATCTCAACGGTCACACTTCG+AGG | - | chr7_3:73868049-73868068 | Msa1123120:intron | 50.0% | |
| TCTCAACGGTCACACTTCGA+GGG | - | chr7_3:73868050-73868069 | Msa1123120:intron | 50.0% | |
| AAGTCCAGATGGGTGTACAG+TGG | - | chr7_3:73868089-73868108 | Msa1123120:CDS | 50.0% | |
| ! | TGGCTTTGCATGCTTCTGCT+GGG | + | chr7_3:73868164-73868183 | None:intergenic | 50.0% |
| GGTGGACACAGAGCAAGAGT+GGG | - | chr7_3:73867525-73867544 | Msa1123120:CDS | 55.0% | |
| ATACAGGGGACACAACCAGG+AGG | - | chr7_3:73867644-73867663 | Msa1123120:CDS | 55.0% | |
| GGACACAACCAGGAGGTTTG+TGG | - | chr7_3:73867651-73867670 | Msa1123120:CDS | 55.0% | |
| ACTTGAGCCCACAAACCTCC+TGG | + | chr7_3:73867662-73867681 | None:intergenic | 55.0% | |
| AGGAGGTTTGTGGGCTCAAG+TGG | - | chr7_3:73867661-73867680 | Msa1123120:CDS | 55.0% | |
| CACCTACCCGATGTCTTCAC+AGG | - | chr7_3:73867766-73867785 | Msa1123120:CDS | 55.0% | |
| ! | CATAGCTGCTGTGAAGGCAC+TGG | - | chr7_3:73867800-73867819 | Msa1123120:CDS | 55.0% |
| CCGAGAACCAGCTTACCCTT+TGG | - | chr7_3:73867998-73868017 | Msa1123120:CDS | 55.0% | |
| GATGCCACTGTACACCCATC+TGG | + | chr7_3:73868096-73868115 | None:intergenic | 55.0% | |
| TGGGTGTACAGTGGCATCTG+CGG | - | chr7_3:73868098-73868117 | Msa1123120:CDS | 55.0% | |
| ! | GTGGCTTTGCATGCTTCTGC+TGG | + | chr7_3:73868165-73868184 | None:intergenic | 55.0% |
| GGGTGGACACAGAGCAAGAG+TGG | - | chr7_3:73867524-73867543 | Msa1123120:CDS | 60.0% | |
| !! | CTGCTGTGAAGGCACTGGCT+TGG | - | chr7_3:73867805-73867824 | Msa1123120:CDS | 60.0% |
| !! | CACTGGCTTGGTGTCCCTCA+GGG | - | chr7_3:73867817-73867836 | Msa1123120:CDS | 60.0% |
| !! | CTACTGGCTTCTGGTGGAGG+TGG | - | chr7_3:73867844-73867863 | Msa1123120:CDS | 60.0% |
| GGGCTCAAGTGGTCACCCTC+AGG | - | chr7_3:73867672-73867691 | Msa1123120:CDS | 65.0% | |
| !! | GCACTGGCTTGGTGTCCCTC+AGG | - | chr7_3:73867816-73867835 | Msa1123120:CDS | 65.0% |
| CTGGCTTCTGGTGGAGGTGG+AGG | - | chr7_3:73867847-73867866 | Msa1123120:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 73867510 | 73868233 | 73867510 | ID=Msa1123120;Name=Msa1123120 |
| chr7_3 | mRNA | 73867510 | 73868233 | 73867510 | ID=Msa1123120-mRNA-1;Parent=Msa1123120;Name=Msa1123120-mRNA-1;_AED=0.03;_eAED=0.06;_QI=0|0|0|1|0|0.33|3|0|226 |
| chr7_3 | exon | 73868078 | 73868233 | 73868078 | ID=Msa1123120-mRNA-1:exon:19473;Parent=Msa1123120-mRNA-1 |
| chr7_3 | exon | 73867956 | 73868062 | 73867956 | ID=Msa1123120-mRNA-1:exon:19472;Parent=Msa1123120-mRNA-1 |
| chr7_3 | exon | 73867510 | 73867927 | 73867510 | ID=Msa1123120-mRNA-1:exon:19471;Parent=Msa1123120-mRNA-1 |
| chr7_3 | CDS | 73868078 | 73868233 | 73868078 | ID=Msa1123120-mRNA-1:cds;Parent=Msa1123120-mRNA-1 |
| chr7_3 | CDS | 73867956 | 73868062 | 73867956 | ID=Msa1123120-mRNA-1:cds;Parent=Msa1123120-mRNA-1 |
| chr7_3 | CDS | 73867510 | 73867927 | 73867510 | ID=Msa1123120-mRNA-1:cds;Parent=Msa1123120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
