Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421790 | sp|Q9SZA4|CDC21_ARATH | 71.849 | 238 | 38 | 1 | 1 | 209 | 220 | 457 | 2.07e-120 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421790 | A0A072U570 | 85.356 | 239 | 5 | 2 | 1 | 209 | 219 | 457 | 1.17e-141 | 412 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1037130 | Msa1421790 | 0.810337 | 1.212209e-50 | -8.615850e-47 |
| Msa1123120 | Msa1421790 | 0.996377 | 9.378936e-227 | -8.615850e-47 |
| Msa1164370 | Msa1421790 | 0.983746 | 1.363935e-158 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421790 | MtrunA17_Chr7g0267961 | 85.356 | 239 | 5 | 2 | 1 | 209 | 219 | 457 | 2.26e-145 | 412 |
| Msa1421790 | MtrunA17_Chr5g0395821 | 70.168 | 238 | 42 | 1 | 1 | 209 | 217 | 454 | 7.64e-122 | 352 |
| Msa1421790 | MtrunA17_Chr3g0098921 | 68.201 | 239 | 46 | 2 | 1 | 209 | 221 | 459 | 5.25e-117 | 340 |
| Msa1421790 | MtrunA17_Chr7g0228191 | 73.214 | 224 | 29 | 2 | 1 | 193 | 106 | 329 | 2.72e-114 | 329 |
| Msa1421790 | MtrunA17_Chr7g0235181 | 69.167 | 240 | 38 | 4 | 1 | 209 | 192 | 426 | 7.05e-113 | 328 |
| Msa1421790 | MtrunA17_Chr7g0233651 | 64.286 | 238 | 47 | 2 | 1 | 209 | 203 | 431 | 5.44e-103 | 304 |
| Msa1421790 | MtrunA17_Chr7g0234591 | 65.417 | 240 | 49 | 3 | 1 | 209 | 200 | 436 | 1.01e-102 | 303 |
| Msa1421790 | MtrunA17_Chr2g0330601 | 65.385 | 208 | 64 | 3 | 4 | 207 | 166 | 369 | 2.38e-88 | 265 |
| Msa1421790 | MtrunA17_Chr3g0111961 | 48.309 | 207 | 84 | 1 | 3 | 186 | 259 | 465 | 3.21e-65 | 208 |
| Msa1421790 | MtrunA17_Chr2g0308501 | 47.685 | 216 | 81 | 4 | 4 | 188 | 99 | 313 | 3.66e-63 | 199 |
| Msa1421790 | MtrunA17_Chr2g0330681 | 58.115 | 191 | 32 | 4 | 4 | 163 | 196 | 369 | 2.00e-62 | 198 |
| Msa1421790 | MtrunA17_Chr4g0057131 | 46.860 | 207 | 87 | 1 | 4 | 187 | 249 | 455 | 1.17e-61 | 199 |
| Msa1421790 | MtrunA17_Chr2g0281451 | 27.429 | 175 | 101 | 5 | 3 | 175 | 97 | 247 | 1.27e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421790 | AT4G33270.1 | 71.849 | 238 | 38 | 1 | 1 | 209 | 220 | 457 | 2.11e-121 | 352 |
| Msa1421790 | AT4G33260.1 | 71.849 | 238 | 38 | 1 | 1 | 209 | 210 | 447 | 2.12e-116 | 338 |
| Msa1421790 | AT5G27570.1 | 67.083 | 240 | 48 | 3 | 1 | 209 | 211 | 450 | 7.72e-107 | 315 |
| Msa1421790 | AT5G27945.1 | 65.690 | 239 | 52 | 2 | 1 | 209 | 190 | 428 | 9.48e-106 | 311 |
| Msa1421790 | AT4G33260.2 | 69.683 | 221 | 38 | 1 | 1 | 192 | 210 | 430 | 9.63e-106 | 311 |
| Msa1421790 | AT5G27080.1 | 64.583 | 240 | 54 | 3 | 1 | 209 | 203 | 442 | 1.88e-102 | 303 |
| Msa1421790 | AT5G26900.1 | 64.435 | 239 | 55 | 2 | 1 | 209 | 206 | 444 | 3.33e-102 | 302 |
| Msa1421790 | AT5G13840.1 | 48.792 | 207 | 83 | 2 | 3 | 186 | 254 | 460 | 3.56e-66 | 211 |
| Msa1421790 | AT5G13840.2 | 48.792 | 207 | 83 | 2 | 3 | 186 | 254 | 460 | 3.56e-66 | 211 |
| Msa1421790 | AT4G22910.1 | 47.343 | 207 | 86 | 1 | 4 | 187 | 257 | 463 | 1.68e-64 | 207 |
| Msa1421790 | AT4G11920.1 | 44.860 | 214 | 95 | 1 | 4 | 194 | 249 | 462 | 5.49e-62 | 200 |
Find 63 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGAAACTCTTAGATTT+TGG | 0.143277 | tig0025298:-37831 | Msa1421790:CDS |
| GTGGCTTTGCATGCTTCTGC+TGG | 0.230906 | tig0025298:+37793 | Msa1421790:intergenic |
| CCTTTGGAAGTATCCTTCTA+TGG | 0.254046 | tig0025298:-37941 | Msa1421790:CDS |
| CAGGGTAATCTACTGGCTTC+TGG | 0.309255 | tig0025298:-38120 | Msa1421790:CDS |
| GTATCCTTCTATGGTGAAAA+TGG | 0.311467 | tig0025298:-37932 | Msa1421790:CDS |
| AAGGGCTCATTATATGTCTT+TGG | 0.358151 | tig0025298:+37769 | Msa1421790:intergenic |
| ACGATAATGTTGTTCACATA+TGG | 0.371186 | tig0025298:-38237 | Msa1421790:CDS |
| AATCTACTGGCTTCTGGTGG+AGG | 0.376592 | tig0025298:-38114 | Msa1421790:CDS |
| GTCATCATCTTCAACGAATA+CGG | 0.384451 | tig0025298:+37734 | Msa1421790:intergenic |
| TTAGTAGCTCACGCTCATTC+TGG | 0.385492 | tig0025298:+37995 | Msa1421790:intergenic |
| CACTTCGAGGGTGATGTATA+TGG | 0.388915 | tig0025298:-37893 | Msa1421790:CDS |
| TGGCTTTGCATGCTTCTGCT+GGG | 0.422084 | tig0025298:+37794 | Msa1421790:intergenic |
| CCGAGAACCAGCTTACCCTT+TGG | 0.427049 | tig0025298:-37957 | Msa1421790:CDS |
| CTCACATCGTTGAAACATAC+AGG | 0.428220 | tig0025298:-38327 | Msa1421790:CDS |
| CTACTGGCTTCTGGTGGAGG+TGG | 0.431389 | tig0025298:-38111 | Msa1421790:CDS |
| AACAATCATATTCTGACAAC+AGG | 0.439142 | tig0025298:-38394 | Msa1421790:CDS |
| CTGGCTTCTGGTGGAGGTGG+AGG | 0.440261 | tig0025298:-38108 | Msa1421790:CDS |
| CAAGAGTGGGTTCACTGTCT+TGG | 0.449748 | tig0025298:-38417 | Msa1421790:CDS |
| CGCAAGTATGTGCTCTGCTA+TGG | 0.473307 | tig0025298:-38020 | Msa1421790:CDS |
| GATGCCACTGTACACCCATC+TGG | 0.480407 | tig0025298:+37862 | Msa1421790:intergenic |
| ATCTCAACGGTCACACTTCG+AGG | 0.480528 | tig0025298:-37906 | Msa1421790:CDS |
| CCAAAGGGTAAGCTGGTTCT+CGG | 0.481991 | tig0025298:+37957 | Msa1421790:intergenic |
| CGATAATGTTGTTCACATAT+GGG | 0.487900 | tig0025298:-38236 | Msa1421790:CDS |
| TGTCCCTCAGGGTAATCTAC+TGG | 0.491265 | tig0025298:-38127 | Msa1421790:intron |
| GGACACAACCAGGAGGTTTG+TGG | 0.497262 | tig0025298:-38304 | Msa1421790:CDS |
| GATACTTCCAAAGGGTAAGC+TGG | 0.503616 | tig0025298:+37950 | Msa1421790:intergenic |
| GACACAACCAGGAGGTTTGT+GGG | 0.510860 | tig0025298:-38303 | Msa1421790:CDS |
| AACATACAGGGGACACAACC+AGG | 0.511067 | tig0025298:-38314 | Msa1421790:CDS |
| CTCATTATATGTCTTTGGTG+TGG | 0.516280 | tig0025298:+37774 | Msa1421790:intergenic |
| TATTCTGACAACAGGAGGAA+TGG | 0.524698 | tig0025298:-38386 | Msa1421790:CDS |
| GGGCTCAAGTGGTCACCCTC+AGG | 0.528586 | tig0025298:-38283 | Msa1421790:CDS |
| AGGAGGTTTGTGGGCTCAAG+TGG | 0.528883 | tig0025298:-38294 | Msa1421790:CDS |
| ACTTGAGCCCACAAACCTCC+TGG | 0.538177 | tig0025298:+38296 | Msa1421790:intergenic |
| TCATCATCTTCAACGAATAC+GGG | 0.547121 | tig0025298:+37735 | Msa1421790:intergenic |
| GGGTGGACACAGAGCAAGAG+TGG | 0.549117 | tig0025298:-38431 | Msa1421790:CDS |
| GGTAATCTACTGGCTTCTGG+TGG | 0.565300 | tig0025298:-38117 | Msa1421790:CDS |
| TATATGGCGCAAAGTCCAGA+TGG | 0.565373 | tig0025298:-37877 | Msa1421790:CDS |
| CGTGAGCTACTAAGCTCACA+TGG | 0.568122 | tig0025298:-37985 | Msa1421790:CDS |
| CTGACAACAGGAGGAATGGA+TGG | 0.572412 | tig0025298:-38382 | Msa1421790:CDS |
| CATAGAAGGATACTTCCAAA+GGG | 0.584766 | tig0025298:+37942 | Msa1421790:intergenic |
| TCACATATGGGATAGATCTG+TGG | 0.596581 | tig0025298:-38224 | Msa1421790:intron |
| AGATTGAATTCAGTTGACAC+TGG | 0.597762 | tig0025298:-38045 | Msa1421790:CDS |
| GGACAACAATTGTCAAGTGG+TGG | 0.599505 | tig0025298:-38262 | Msa1421790:CDS |
| ATACGGGTGAAATTAGCAAA+GGG | 0.600657 | tig0025298:+37751 | Msa1421790:intergenic |
| TCTCAACGGTCACACTTCGA+GGG | 0.613321 | tig0025298:-37905 | Msa1421790:CDS |
| GTGAAAATGGCAGATCTCAA+CGG | 0.613838 | tig0025298:-37919 | Msa1421790:CDS |
| AATACGGGTGAAATTAGCAA+AGG | 0.619999 | tig0025298:+37750 | None:intergenic |
| CAGCTAAGGGCAATGAAGGG+TGG | 0.622963 | tig0025298:-38448 | None:intergenic |
| CCATAGAAGGATACTTCCAA+AGG | 0.623454 | tig0025298:+37941 | Msa1421790:intergenic |
| AAGCTGTGGAACACACACAC+TGG | 0.630912 | tig0025298:-38072 | Msa1421790:CDS |
| GTGATCATTGCATTAAGCTG+TGG | 0.635919 | tig0025298:-38086 | Msa1421790:CDS |
| AATCATATTCTGACAACAGG+AGG | 0.641326 | tig0025298:-38391 | Msa1421790:CDS |
| ACTTGACAATTGTTGTCCTG+AGG | 0.654097 | tig0025298:+38267 | Msa1421790:intergenic |
| TCACATCGTTGAAACATACA+GGG | 0.656486 | tig0025298:-38326 | Msa1421790:CDS |
| CTTGACAATTGTTGTCCTGA+GGG | 0.657303 | tig0025298:+38268 | Msa1421790:intergenic |
| TCAGGACAACAATTGTCAAG+TGG | 0.664718 | tig0025298:-38265 | Msa1421790:CDS |
| TGGGTGTACAGTGGCATCTG+CGG | 0.666837 | tig0025298:-37857 | Msa1421790:CDS |
| CTGCAGCTAAGGGCAATGAA+GGG | 0.668716 | tig0025298:-38451 | None:intergenic |
| GGTGGACACAGAGCAAGAGT+GGG | 0.681424 | tig0025298:-38430 | Msa1421790:CDS |
| AAGTCCAGATGGGTGTACAG+TGG | 0.686450 | tig0025298:-37866 | Msa1421790:CDS |
| ATATGGCGCAAAGTCCAGAT+GGG | 0.692355 | tig0025298:-37876 | Msa1421790:CDS |
| CACATCGTTGAAACATACAG+GGG | 0.758385 | tig0025298:-38325 | Msa1421790:CDS |
| ATACAGGGGACACAACCAGG+AGG | 0.774768 | tig0025298:-38311 | Msa1421790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGATTTTGGAATGTCTTT+GGG | - | tig0025298:38361-38380 | Msa1421790:CDS | 25.0% |
| AACAATCATATTCTGACAAC+AGG | - | tig0025298:37786-37805 | Msa1421790:CDS | 30.0% | |
| ACGATAATGTTGTTCACATA+TGG | - | tig0025298:37943-37962 | Msa1421790:CDS | 30.0% | |
| CGATAATGTTGTTCACATAT+GGG | - | tig0025298:37944-37963 | Msa1421790:CDS | 30.0% | |
| ! | CAGATGAAACTCTTAGATTT+TGG | - | tig0025298:38349-38368 | Msa1421790:CDS | 30.0% |
| !!! | CTTAGATTTTGGAATGTCTT+TGG | - | tig0025298:38360-38379 | Msa1421790:CDS | 30.0% |
| AATCATATTCTGACAACAGG+AGG | - | tig0025298:37789-37808 | Msa1421790:CDS | 35.0% | |
| TCACATCGTTGAAACATACA+GGG | - | tig0025298:37854-37873 | Msa1421790:CDS | 35.0% | |
| AGATTGAATTCAGTTGACAC+TGG | - | tig0025298:38135-38154 | Msa1421790:intron | 35.0% | |
| CATAGAAGGATACTTCCAAA+GGG | + | tig0025298:38241-38260 | Msa1421790:intergenic | 35.0% | |
| GTATCCTTCTATGGTGAAAA+TGG | - | tig0025298:38248-38267 | Msa1421790:CDS | 35.0% | |
| CTCATTATATGTCTTTGGTG+TGG | + | tig0025298:38409-38428 | Msa1421790:intergenic | 35.0% | |
| AAGGGCTCATTATATGTCTT+TGG | + | tig0025298:38414-38433 | Msa1421790:intergenic | 35.0% | |
| ATACGGGTGAAATTAGCAAA+GGG | + | tig0025298:38432-38451 | Msa1421790:intergenic | 35.0% | |
| AATACGGGTGAAATTAGCAA+AGG | + | tig0025298:38433-38452 | Msa1421790:intergenic | 35.0% | |
| TATTCTGACAACAGGAGGAA+TGG | - | tig0025298:37794-37813 | Msa1421790:CDS | 40.0% | |
| CTCACATCGTTGAAACATAC+AGG | - | tig0025298:37853-37872 | Msa1421790:CDS | 40.0% | |
| CACATCGTTGAAACATACAG+GGG | - | tig0025298:37855-37874 | Msa1421790:CDS | 40.0% | |
| CTTGACAATTGTTGTCCTGA+GGG | + | tig0025298:37915-37934 | Msa1421790:intergenic | 40.0% | |
| ACTTGACAATTGTTGTCCTG+AGG | + | tig0025298:37916-37935 | Msa1421790:intergenic | 40.0% | |
| TCAGGACAACAATTGTCAAG+TGG | - | tig0025298:37915-37934 | Msa1421790:CDS | 40.0% | |
| TCACATATGGGATAGATCTG+TGG | - | tig0025298:37956-37975 | Msa1421790:CDS | 40.0% | |
| GTGATCATTGCATTAAGCTG+TGG | - | tig0025298:38094-38113 | Msa1421790:CDS | 40.0% | |
| CCATAGAAGGATACTTCCAA+AGG | + | tig0025298:38242-38261 | Msa1421790:intergenic | 40.0% | |
| !! | CCTTTGGAAGTATCCTTCTA+TGG | - | tig0025298:38239-38258 | Msa1421790:CDS | 40.0% |
| !!! | TCTGCCATTTTCACCATAGA+AGG | + | tig0025298:38255-38274 | Msa1421790:intergenic | 40.0% |
| GTGAAAATGGCAGATCTCAA+CGG | - | tig0025298:38261-38280 | Msa1421790:CDS | 40.0% | |
| GGACAACAATTGTCAAGTGG+TGG | - | tig0025298:37918-37937 | Msa1421790:CDS | 45.0% | |
| CTCAAACCTGTGAAGACATC+GGG | + | tig0025298:38000-38019 | Msa1421790:intergenic | 45.0% | |
| CCTCAAACCTGTGAAGACAT+CGG | + | tig0025298:38001-38020 | Msa1421790:intergenic | 45.0% | |
| AAGCCAGTAGATTACCCTGA+GGG | + | tig0025298:38059-38078 | Msa1421790:intergenic | 45.0% | |
| TTAGTAGCTCACGCTCATTC+TGG | + | tig0025298:38188-38207 | Msa1421790:intergenic | 45.0% | |
| GATACTTCCAAAGGGTAAGC+TGG | + | tig0025298:38233-38252 | Msa1421790:intergenic | 45.0% | |
| CACTTCGAGGGTGATGTATA+TGG | - | tig0025298:38287-38306 | Msa1421790:CDS | 45.0% | |
| TATATGGCGCAAAGTCCAGA+TGG | - | tig0025298:38303-38322 | Msa1421790:CDS | 45.0% | |
| ATATGGCGCAAAGTCCAGAT+GGG | - | tig0025298:38304-38323 | Msa1421790:CDS | 45.0% | |
| ! | CAAGAGTGGGTTCACTGTCT+TGG | - | tig0025298:37763-37782 | Msa1421790:CDS | 50.0% |
| CTGACAACAGGAGGAATGGA+TGG | - | tig0025298:37798-37817 | Msa1421790:CDS | 50.0% | |
| AACATACAGGGGACACAACC+AGG | - | tig0025298:37866-37885 | Msa1421790:CDS | 50.0% | |
| GACACAACCAGGAGGTTTGT+GGG | - | tig0025298:37877-37896 | Msa1421790:CDS | 50.0% | |
| AACCTGTGAAGACATCGGGT+AGG | + | tig0025298:37996-38015 | Msa1421790:intergenic | 50.0% | |
| CCGATGTCTTCACAGGTTTG+AGG | - | tig0025298:37998-38017 | Msa1421790:CDS | 50.0% | |
| GGAACACATAGCTGCTGTGA+AGG | - | tig0025298:38019-38038 | Msa1421790:CDS | 50.0% | |
| TGTCCCTCAGGGTAATCTAC+TGG | - | tig0025298:38053-38072 | Msa1421790:CDS | 50.0% | |
| GAAGCCAGTAGATTACCCTG+AGG | + | tig0025298:38060-38079 | Msa1421790:intergenic | 50.0% | |
| !! | CAGGGTAATCTACTGGCTTC+TGG | - | tig0025298:38060-38079 | Msa1421790:CDS | 50.0% |
| !! | GGTAATCTACTGGCTTCTGG+TGG | - | tig0025298:38063-38082 | Msa1421790:CDS | 50.0% |
| !! | AATCTACTGGCTTCTGGTGG+AGG | - | tig0025298:38066-38085 | Msa1421790:CDS | 50.0% |
| AAGCTGTGGAACACACACAC+TGG | - | tig0025298:38108-38127 | Msa1421790:CDS | 50.0% | |
| CGCAAGTATGTGCTCTGCTA+TGG | - | tig0025298:38160-38179 | Msa1421790:intron | 50.0% | |
| CGTGAGCTACTAAGCTCACA+TGG | - | tig0025298:38195-38214 | Msa1421790:intron | 50.0% | |
| ! | CCAAAGGGTAAGCTGGTTCT+CGG | + | tig0025298:38226-38245 | Msa1421790:intergenic | 50.0% |
| ATCTCAACGGTCACACTTCG+AGG | - | tig0025298:38274-38293 | Msa1421790:CDS | 50.0% | |
| TCTCAACGGTCACACTTCGA+GGG | - | tig0025298:38275-38294 | Msa1421790:CDS | 50.0% | |
| AAGTCCAGATGGGTGTACAG+TGG | - | tig0025298:38314-38333 | Msa1421790:CDS | 50.0% | |
| ! | TGGCTTTGCATGCTTCTGCT+GGG | + | tig0025298:38389-38408 | Msa1421790:intergenic | 50.0% |
| GGTGGACACAGAGCAAGAGT+GGG | - | tig0025298:37750-37769 | Msa1421790:CDS | 55.0% | |
| ATACAGGGGACACAACCAGG+AGG | - | tig0025298:37869-37888 | Msa1421790:CDS | 55.0% | |
| GGACACAACCAGGAGGTTTG+TGG | - | tig0025298:37876-37895 | Msa1421790:CDS | 55.0% | |
| ACTTGAGCCCACAAACCTCC+TGG | + | tig0025298:37887-37906 | Msa1421790:intergenic | 55.0% | |
| AGGAGGTTTGTGGGCTCAAG+TGG | - | tig0025298:37886-37905 | Msa1421790:CDS | 55.0% | |
| CACCTACCCGATGTCTTCAC+AGG | - | tig0025298:37991-38010 | Msa1421790:CDS | 55.0% | |
| ! | CATAGCTGCTGTGAAGGCAC+TGG | - | tig0025298:38025-38044 | Msa1421790:CDS | 55.0% |
| CCGAGAACCAGCTTACCCTT+TGG | - | tig0025298:38223-38242 | Msa1421790:intron | 55.0% | |
| GATGCCACTGTACACCCATC+TGG | + | tig0025298:38321-38340 | Msa1421790:intergenic | 55.0% | |
| TGGGTGTACAGTGGCATCTG+CGG | - | tig0025298:38323-38342 | Msa1421790:CDS | 55.0% | |
| ! | GTGGCTTTGCATGCTTCTGC+TGG | + | tig0025298:38390-38409 | Msa1421790:intergenic | 55.0% |
| GGGTGGACACAGAGCAAGAG+TGG | - | tig0025298:37749-37768 | Msa1421790:CDS | 60.0% | |
| !! | CTGCTGTGAAGGCACTGGCT+TGG | - | tig0025298:38030-38049 | Msa1421790:CDS | 60.0% |
| !! | CACTGGCTTGGTGTCCCTCA+GGG | - | tig0025298:38042-38061 | Msa1421790:CDS | 60.0% |
| !! | CTACTGGCTTCTGGTGGAGG+TGG | - | tig0025298:38069-38088 | Msa1421790:CDS | 60.0% |
| GGGCTCAAGTGGTCACCCTC+AGG | - | tig0025298:37897-37916 | Msa1421790:CDS | 65.0% | |
| !! | GCACTGGCTTGGTGTCCCTC+AGG | - | tig0025298:38041-38060 | Msa1421790:CDS | 65.0% |
| CTGGCTTCTGGTGGAGGTGG+AGG | - | tig0025298:38072-38091 | Msa1421790:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025298 | gene | 37744 | 38458 | 37744 | ID=Msa1421790;Name=Msa1421790 |
| tig0025298 | mRNA | 37744 | 38458 | 37744 | ID=Msa1421790-mRNA-1;Parent=Msa1421790;Name=Msa1421790-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|209 |
| tig0025298 | exon | 38225 | 38458 | 38225 | ID=Msa1421790-mRNA-1:exon:2242;Parent=Msa1421790-mRNA-1 |
| tig0025298 | exon | 37744 | 38139 | 37744 | ID=Msa1421790-mRNA-1:exon:2241;Parent=Msa1421790-mRNA-1 |
| tig0025298 | CDS | 38225 | 38458 | 38225 | ID=Msa1421790-mRNA-1:cds;Parent=Msa1421790-mRNA-1 |
| tig0025298 | CDS | 37744 | 38139 | 37744 | ID=Msa1421790-mRNA-1:cds;Parent=Msa1421790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
