Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165620 | XP_013456630.1 | 76.569 | 239 | 48 | 3 | 12 | 247 | 104 | 337 | 3.48e-124 | 368 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165620 | sp|Q9FNY2|DPB_ARATH | 70.157 | 191 | 49 | 3 | 12 | 199 | 111 | 296 | 1.82e-88 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165620 | A0A072UMP7 | 76.569 | 239 | 48 | 3 | 12 | 247 | 104 | 337 | 1.66e-124 | 368 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1165620 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0748370 | Msa1165620 | 0.889478 | 2.337937e-73 | -8.615850e-47 |
| Msa1165620 | Msa1362190 | 0.877221 | 7.478835e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165620 | MtrunA17_Chr4g0039751 | 76.569 | 239 | 48 | 3 | 12 | 247 | 104 | 337 | 3.20e-128 | 368 |
| Msa1165620 | MtrunA17_Chr4g0039741 | 69.295 | 241 | 64 | 4 | 12 | 247 | 100 | 335 | 5.72e-116 | 337 |
| Msa1165620 | MtrunA17_Chr7g0269651 | 93.496 | 123 | 8 | 0 | 169 | 291 | 1 | 123 | 1.60e-73 | 243 |
| Msa1165620 | MtrunA17_Chr7g0269641 | 87.611 | 113 | 14 | 0 | 12 | 124 | 80 | 192 | 9.21e-65 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165620 | AT5G03415.2 | 70.833 | 192 | 48 | 3 | 11 | 199 | 104 | 290 | 1.22e-90 | 274 |
| Msa1165620 | AT5G03415.1 | 70.157 | 191 | 49 | 3 | 12 | 199 | 111 | 296 | 1.85e-89 | 271 |
| Msa1165620 | AT5G02470.3 | 43.386 | 189 | 96 | 5 | 11 | 194 | 60 | 242 | 8.09e-51 | 169 |
| Msa1165620 | AT5G02470.1 | 43.386 | 189 | 96 | 5 | 11 | 194 | 60 | 242 | 8.09e-51 | 169 |
| Msa1165620 | AT5G02470.2 | 43.386 | 189 | 96 | 5 | 11 | 194 | 60 | 242 | 8.09e-51 | 169 |
Find 82 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGTAGCTTATTGATTT+AGG | 0.131004 | 7_4:-57560270 | Msa1165620:five_prime_UTR |
| CAGGCATCACCTCCGCTTTC+TGG | 0.140961 | 7_4:-57557139 | Msa1165620:CDS |
| TCAATTTCCACATGACATTT+TGG | 0.179498 | 7_4:+57556290 | None:intergenic |
| AATGAAAAGGACAATGATTT+TGG | 0.189333 | 7_4:+57560208 | None:intergenic |
| GTCAGGCTTGCATCAGTTGC+AGG | 0.260541 | 7_4:-57557197 | Msa1165620:CDS |
| TATTATTTCCAAGGATAAAA+AGG | 0.267147 | 7_4:-57558704 | Msa1165620:CDS |
| AACTGTAGCTTATTGATTTA+GGG | 0.280597 | 7_4:-57560269 | Msa1165620:five_prime_UTR |
| ATCTGATTCAAGAGCAGTTT+TGG | 0.287261 | 7_4:+57560148 | None:intergenic |
| CTTGTTCCTCAAACTCCTTT+AGG | 0.292754 | 7_4:+57558462 | None:intergenic |
| TATTATTGCATCAAGTTTGT+AGG | 0.312560 | 7_4:-57558289 | Msa1165620:intron |
| CAGTTTCAAGCGTGTCAATT+AGG | 0.323437 | 7_4:-57557165 | Msa1165620:CDS |
| GTTGGAGAAGGTAGAAAGTA+AGG | 0.363432 | 7_4:-57559267 | Msa1165620:CDS |
| TCCGCTTTCTGGAATACTTA+AGG | 0.378685 | 7_4:-57557128 | Msa1165620:intron |
| GTCGGCTCGCTCCGGCTAGA+TGG | 0.379241 | 7_4:+57560017 | None:intergenic |
| TTGTTGCGAAAGTCGATAGA+TGG | 0.385930 | 7_4:-57560097 | Msa1165620:five_prime_UTR |
| GGGGAAGGTTCTAGCTTGTC+AGG | 0.408012 | 7_4:-57557214 | Msa1165620:CDS |
| GGGGACAAAACACTATTCAT+TGG | 0.417434 | 7_4:+57558910 | None:intergenic |
| TCAAAATAGTCCTAAACCTT+AGG | 0.426376 | 7_4:-57560308 | Msa1165620:five_prime_UTR |
| TGTTTGTTAGGAAAGCTAAC+TGG | 0.430033 | 7_4:-57556440 | Msa1165620:intron |
| AAAGATAAATCTCCGCTTGA+AGG | 0.440338 | 7_4:+57558217 | None:intergenic |
| GAGAACATTCAGAACATCAT+AGG | 0.447978 | 7_4:+57558738 | None:intergenic |
| AATGAGCAATTATATAGATC+AGG | 0.460541 | 7_4:-57558244 | Msa1165620:CDS |
| AAGCGTGTCAATTAGGCCTC+AGG | 0.469004 | 7_4:-57557158 | Msa1165620:CDS |
| ATCCTACCTAAAGGAGTTTG+AGG | 0.469730 | 7_4:-57558468 | Msa1165620:CDS |
| CTAAAAGTTAAGTGTGGGGT+TGG | 0.482389 | 7_4:-57560429 | Msa1165620:five_prime_UTR |
| TAGTGCTATTGAGAAGCTAA+AGG | 0.482438 | 7_4:-57558656 | Msa1165620:intron |
| GCAGCGGCTGTCTGCGTCGT+CGG | 0.497935 | 7_4:+57559999 | None:intergenic |
| GCAAACTAAAAGTTAAGTGT+GGG | 0.499822 | 7_4:-57560434 | None:intergenic |
| GAAAGTCGATAGATGGAAGA+TGG | 0.500686 | 7_4:-57560090 | Msa1165620:five_prime_UTR |
| TGTACCTGAACCAGAACAAA+AGG | 0.501925 | 7_4:+57558193 | None:intergenic |
| CTATGGTGCACAAAATGAAA+AGG | 0.506225 | 7_4:+57560195 | None:intergenic |
| GGCAATGGATATTATTTCCA+AGG | 0.507516 | 7_4:-57558713 | Msa1165620:CDS |
| ATTCAACAGATCGAATGTCT+AGG | 0.511456 | 7_4:-57558518 | Msa1165620:intron |
| TGCAACTGTTGAACTTGAAG+TGG | 0.513525 | 7_4:-57557646 | Msa1165620:CDS |
| TTCAACAGATCGAATGTCTA+GGG | 0.521141 | 7_4:-57558517 | Msa1165620:intron |
| CATCATCATGTATGTCAAGA+TGG | 0.522280 | 7_4:+57559964 | None:intergenic |
| GAATGACACACAGTTTCCCT+TGG | 0.532011 | 7_4:-57556252 | Msa1165620:CDS |
| ACTTACCATTGCTGTAATGA+TGG | 0.533611 | 7_4:+57556405 | None:intergenic |
| CGCAAACTAAAAGTTAAGTG+TGG | 0.533862 | 7_4:-57560435 | None:intergenic |
| ACACTCAATGTTACGGAAGG+AGG | 0.535766 | 7_4:-57557235 | Msa1165620:CDS |
| TATTGCTACACTCAATGTTA+CGG | 0.535816 | 7_4:-57557242 | Msa1165620:CDS |
| AAGCAAAGTATCCTACCTAA+AGG | 0.541642 | 7_4:-57558477 | Msa1165620:CDS |
| CACTCAATGTTACGGAAGGA+GGG | 0.556476 | 7_4:-57557234 | Msa1165620:CDS |
| TTGGAGAAGGTAGAAAGTAA+GGG | 0.559901 | 7_4:-57559266 | Msa1165620:CDS |
| AAAGTCGATAGATGGAAGAT+GGG | 0.561763 | 7_4:-57560089 | Msa1165620:five_prime_UTR |
| ATTGCTCATTTCGTTGAACA+AGG | 0.562679 | 7_4:+57558257 | None:intergenic |
| ACCTTAAGTATTCCAGAAAG+CGG | 0.563806 | 7_4:+57557127 | None:intergenic |
| AATCATGTGTAGATGAAAGC+AGG | 0.569304 | 7_4:-57560052 | Msa1165620:five_prime_UTR |
| GAACATCATAGGCCCTTCGA+CGG | 0.570623 | 7_4:+57558749 | None:intergenic |
| TGATGTTCTGAATGTTCTCA+TGG | 0.572407 | 7_4:-57558734 | Msa1165620:CDS |
| TTTAGCTTCTCAATAGCACT+AGG | 0.575236 | 7_4:+57558658 | None:intergenic |
| CGAAGGAAGAAATAATGCTA+TGG | 0.580934 | 7_4:+57560178 | None:intergenic |
| GACATACATGATGATGATGC+AGG | 0.583166 | 7_4:-57559957 | Msa1165620:exon |
| TTCCTCAAACTCCTTTAGGT+AGG | 0.587051 | 7_4:+57558466 | None:intergenic |
| TTCAGATCCAAAATGTCATG+TGG | 0.587452 | 7_4:-57556297 | Msa1165620:intron |
| CTACTATGTGCTCAAAGCAA+TGG | 0.590968 | 7_4:-57557290 | Msa1165620:CDS |
| GATGATGATGCAGGATCACA+AGG | 0.593414 | 7_4:-57559948 | Msa1165620:CDS |
| AACGTATTCAGAATTCTCCA+AGG | 0.597884 | 7_4:+57556235 | None:intergenic |
| TACAACCATCATTACAGCAA+TGG | 0.598226 | 7_4:-57556410 | Msa1165620:intron |
| GTAGATGAAAGCAGGAGTGC+TGG | 0.600296 | 7_4:-57560044 | Msa1165620:five_prime_UTR |
| GTTGTATGCAGTGTTGGAGA+AGG | 0.602504 | 7_4:-57559279 | Msa1165620:intron |
| AATGTTACGGAAGGAGGGGA+AGG | 0.604293 | 7_4:-57557229 | Msa1165620:CDS |
| TCTGAATGTTCTCATGGCAA+TGG | 0.604838 | 7_4:-57558728 | Msa1165620:CDS |
| ACCTTAGGAAAAGTTAGAAG+AGG | 0.610254 | 7_4:-57560293 | Msa1165620:five_prime_UTR |
| ATGGTTTAATTTGAGAGCAG+CGG | 0.613032 | 7_4:+57559983 | None:intergenic |
| AGCTTCTCAATAGCACTAGG+AGG | 0.614094 | 7_4:+57558661 | None:intergenic |
| CTAGGTGGCAGATGAACTTG+TGG | 0.615812 | 7_4:-57558947 | Msa1165620:intron |
| ACTCAATGTTACGGAAGGAG+GGG | 0.616617 | 7_4:-57557233 | Msa1165620:CDS |
| GGGAAGAACAACTTTCAATG+AGG | 0.618421 | 7_4:-57559246 | Msa1165620:intron |
| ACGTATTCAGAATTCTCCAA+GGG | 0.620753 | 7_4:+57556236 | None:intergenic |
| GGAAGATGGGAACGCGACTG+CGG | 0.633565 | 7_4:-57560076 | Msa1165620:five_prime_UTR |
| ATTGACACGCTTGAAACTGA+AGG | 0.637612 | 7_4:+57557169 | None:intergenic |
| AGATCAGGAAATCCTTCAAG+CGG | 0.637885 | 7_4:-57558229 | Msa1165620:CDS |
| GCTACACTCAATGTTACGGA+AGG | 0.641637 | 7_4:-57557238 | Msa1165620:CDS |
| GGAAATTGATAGTCTTGCTA+AGG | 0.641726 | 7_4:-57556276 | Msa1165620:CDS |
| TTAAGTAACTCGATATAGTG+AGG | 0.647838 | 7_4:-57560341 | Msa1165620:five_prime_UTR |
| CAAACTAAAAGTTAAGTGTG+GGG | 0.655209 | 7_4:-57560433 | None:intergenic |
| TCAAGTTCAACAGTTGCATG+AGG | 0.655545 | 7_4:+57557651 | None:intergenic |
| GAAAGCGGAGGTGATGCCTG+AGG | 0.658645 | 7_4:+57557142 | None:intergenic |
| GACACGCTTGAAACTGAAGG+AGG | 0.686824 | 7_4:+57557172 | None:intergenic |
| TTAAGTATTCCAGAAAGCGG+AGG | 0.697488 | 7_4:+57557130 | None:intergenic |
| AGTGTAGCAATATCTCTCCG+AGG | 0.743133 | 7_4:+57557253 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGAATGATAAAAAA+AGG | + | chr7_4:57556530-57556549 | None:intergenic | 10.0% |
| !! | AGTACAATATTATTAATATT+TGG | + | chr7_4:57556937-57556956 | None:intergenic | 10.0% |
| !!! | TTTATTGCTATTAAACTTTT+GGG | - | chr7_4:57556788-57556807 | Msa1165620:intron | 15.0% |
| !! | AATAATAAGAATTATGAAAG+AGG | + | chr7_4:57557630-57557649 | None:intergenic | 15.0% |
| !!! | ATGTGTTATTTTTATATTCT+AGG | - | chr7_4:57557680-57557699 | Msa1165620:intron | 15.0% |
| !!! | ATATCATTTTTTCTTGTTTA+GGG | - | chr7_4:57559577-57559596 | Msa1165620:intron | 15.0% |
| !! | ATCTAATAAATATGTTTGTT+AGG | - | chr7_4:57560193-57560212 | Msa1165620:five_prime_UTR | 15.0% |
| !!! | GTTTATTGCTATTAAACTTT+TGG | - | chr7_4:57556787-57556806 | Msa1165620:intron | 20.0% |
| !! | TTATTCAGTTACTTATTTCA+GGG | - | chr7_4:57556839-57556858 | Msa1165620:intron | 20.0% |
| !! | ATAAGTTCTTAATAAGTCAA+CGG | - | chr7_4:57556987-57557006 | Msa1165620:intron | 20.0% |
| !! | AAAAATCAAAGAAAGACTTT+AGG | + | chr7_4:57557129-57557148 | None:intergenic | 20.0% |
| !! | CTGAATAAAAAATTAGTTGA+AGG | + | chr7_4:57557539-57557558 | None:intergenic | 20.0% |
| !!! | CTTCAACTAATTTTTTATTC+AGG | - | chr7_4:57557537-57557556 | Msa1165620:intron | 20.0% |
| !! | TCAAAGTCAAGAAATATATT+AGG | + | chr7_4:57557661-57557680 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTATATTCTAGG+TGG | - | chr7_4:57557683-57557702 | Msa1165620:intron | 20.0% |
| !!! | AATTTTGAAACTGTTTGTAA+AGG | + | chr7_4:57557777-57557796 | None:intergenic | 20.0% |
| !!! | TACTGTAGATTTACTTTTTT+GGG | - | chr7_4:57557831-57557850 | Msa1165620:intron | 20.0% |
| !! | TATTATTTCCAAGGATAAAA+AGG | - | chr7_4:57557941-57557960 | Msa1165620:intron | 20.0% |
| !! | TTAATCCTAAAATACAATCA+AGG | - | chr7_4:57558085-57558104 | Msa1165620:intron | 20.0% |
| !!! | TGAATAAAACTGACTTAAAA+TGG | + | chr7_4:57558112-57558131 | None:intergenic | 20.0% |
| !! | CACTCTAATAGATTTAATAT+GGG | - | chr7_4:57558217-57558236 | Msa1165620:CDS | 20.0% |
| !! | ACTCTAATAGATTTAATATG+GGG | - | chr7_4:57558218-57558237 | Msa1165620:CDS | 20.0% |
| !!! | TTCTGAAAAAATAGCAAAAA+AGG | + | chr7_4:57558494-57558513 | None:intergenic | 20.0% |
| !! | GTGTGATAATTAGATTATAT+TGG | - | chr7_4:57558550-57558569 | Msa1165620:intron | 20.0% |
| !! | AAAACATATGCTTAATTAGT+TGG | - | chr7_4:57558587-57558606 | Msa1165620:intron | 20.0% |
| !! | AGAGGAAAAAAAATATTTCT+AGG | + | chr7_4:57558677-57558696 | None:intergenic | 20.0% |
| !! | TTGAGCTTATATAAATCTAA+AGG | + | chr7_4:57558812-57558831 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | chr7_4:57559052-57559071 | Msa1165620:intron | 20.0% |
| !!! | GATATCATTTTTTCTTGTTT+AGG | - | chr7_4:57559576-57559595 | Msa1165620:intron | 20.0% |
| !! | AAAAGTCATAGCAAAATATA+TGG | + | chr7_4:57559665-57559684 | None:intergenic | 20.0% |
| !!! | GAAATTAATCCTATTTTTGT+TGG | + | chr7_4:57559722-57559741 | None:intergenic | 20.0% |
| !! | AATAGGATTAATTTCAGAAT+TGG | - | chr7_4:57559727-57559746 | Msa1165620:intron | 20.0% |
| !! | TTGTCTTGTATTATTTACTA+CGG | - | chr7_4:57559769-57559788 | Msa1165620:intron | 20.0% |
| !! | ATGACATTCAAAAGAAAATT+GGG | + | chr7_4:57559843-57559862 | None:intergenic | 20.0% |
| !! | ATTTACCTGTAATTTCTATA+GGG | - | chr7_4:57559877-57559896 | Msa1165620:intron | 20.0% |
| !!! | CATGAACTTAGTTTTCATAT+AGG | + | chr7_4:57556282-57556301 | None:intergenic | 25.0% |
| !!! | AAACTGTAGCTTATTGATTT+AGG | - | chr7_4:57556375-57556394 | Msa1165620:intron | 25.0% |
| !!! | AACTGTAGCTTATTGATTTA+GGG | - | chr7_4:57556376-57556395 | Msa1165620:intron | 25.0% |
| !! | AATGAAAAGGACAATGATTT+TGG | + | chr7_4:57556440-57556459 | None:intergenic | 25.0% |
| ! | TACATTTATTAGAAGCTGAA+AGG | + | chr7_4:57556748-57556767 | None:intergenic | 25.0% |
| ! | CTTATTCAGTTACTTATTTC+AGG | - | chr7_4:57556838-57556857 | Msa1165620:intron | 25.0% |
| !! | CTTTCATTCATGAACTATTT+TGG | - | chr7_4:57556874-57556893 | Msa1165620:intron | 25.0% |
| !!! | CATGAACTATTTTGGAAAAA+CGG | - | chr7_4:57556882-57556901 | Msa1165620:intron | 25.0% |
| ! | AGAAAAAATAAGAGTAGAAG+AGG | - | chr7_4:57557234-57557253 | Msa1165620:CDS | 25.0% |
| ! | GAAAAAATAAGAGTAGAAGA+GGG | - | chr7_4:57557235-57557254 | Msa1165620:CDS | 25.0% |
| ! | AAAACCTTTCATGCTAATTT+GGG | + | chr7_4:57557265-57557284 | None:intergenic | 25.0% |
| ! | AAAAACCTTTCATGCTAATT+TGG | + | chr7_4:57557266-57557285 | None:intergenic | 25.0% |
| ! | TGAACAGTATGTAACAAAAT+TGG | + | chr7_4:57557305-57557324 | None:intergenic | 25.0% |
| !!! | TTCATTGACTTTTTTCTTTC+TGG | - | chr7_4:57557321-57557340 | Msa1165620:intron | 25.0% |
| !!! | ATTTTTTATTCAGGAACTTG+TGG | - | chr7_4:57557546-57557565 | Msa1165620:intron | 25.0% |
| ! | AAGGAAAAACAACCTTATTA+GGG | + | chr7_4:57557758-57557777 | None:intergenic | 25.0% |
| ! | AAAGGAAAAACAACCTTATT+AGG | + | chr7_4:57557759-57557778 | None:intergenic | 25.0% |
| !!! | GTACTGTAGATTTACTTTTT+TGG | - | chr7_4:57557830-57557849 | Msa1165620:intron | 25.0% |
| !!! | ACTGTAGATTTACTTTTTTG+GGG | - | chr7_4:57557832-57557851 | Msa1165620:intron | 25.0% |
| !! | TTGTATTTCCTTTTTATCCT+TGG | + | chr7_4:57557952-57557971 | None:intergenic | 25.0% |
| ! | AGGATAAAAAGGAAATACAA+TGG | - | chr7_4:57557952-57557971 | Msa1165620:intron | 25.0% |
| ! | TAAAAAGGAAATACAATGGA+AGG | - | chr7_4:57557956-57557975 | Msa1165620:intron | 25.0% |
| ! | AAAAAGGAAATACAATGGAA+GGG | - | chr7_4:57557957-57557976 | Msa1165620:intron | 25.0% |
| ! | TTAAATCTATTAGAGTGGAA+TGG | + | chr7_4:57558214-57558233 | None:intergenic | 25.0% |
| ! | CCATATTAAATCTATTAGAG+TGG | + | chr7_4:57558219-57558238 | None:intergenic | 25.0% |
| ! | CCACTCTAATAGATTTAATA+TGG | - | chr7_4:57558216-57558235 | Msa1165620:CDS | 25.0% |
| ! | TATTATTGCATCAAGTTTGT+AGG | - | chr7_4:57558356-57558375 | Msa1165620:intron | 25.0% |
| ! | AATGAGCAATTATATAGATC+AGG | - | chr7_4:57558401-57558420 | Msa1165620:intron | 25.0% |
| !! | TTTATCTTTACCTTTTGTTC+TGG | - | chr7_4:57558442-57558461 | Msa1165620:intron | 25.0% |
| ! | AAAAAGGTAGATAATGATGA+TGG | + | chr7_4:57558478-57558497 | None:intergenic | 25.0% |
| !! | AATGTTGTTCAATTTTACCT+TGG | - | chr7_4:57558517-57558536 | Msa1165620:intron | 25.0% |
| !! | CTAATTAAGCATATGTTTTG+TGG | + | chr7_4:57558586-57558605 | None:intergenic | 25.0% |
| !!! | ATATTTTTTTTCCTCTTCTG+TGG | - | chr7_4:57558681-57558700 | Msa1165620:CDS | 25.0% |
| ! | ACACTACTTGATACTTAATT+AGG | + | chr7_4:57559131-57559150 | None:intergenic | 25.0% |
| !!! | TTAAGAAAGTACTTGATGAA+TGG | + | chr7_4:57559626-57559645 | None:intergenic | 25.0% |
| ! | GATTAATTTCAGAATTGGTT+AGG | - | chr7_4:57559732-57559751 | Msa1165620:intron | 25.0% |
| ! | GATGACATTCAAAAGAAAAT+TGG | + | chr7_4:57559844-57559863 | None:intergenic | 25.0% |
| ! | GATTTACCTGTAATTTCTAT+AGG | - | chr7_4:57559876-57559895 | Msa1165620:intron | 25.0% |
| ! | AAAAAATGACACTAATCCTT+GGG | - | chr7_4:57560040-57560059 | Msa1165620:five_prime_UTR | 25.0% |
| !!! | ACAATGTTGAAAATTTTAGC+TGG | + | chr7_4:57560150-57560169 | None:intergenic | 25.0% |
| !!! | ATTTACAGTTTTATTGGTGA+CGG | + | chr7_4:57560318-57560337 | None:intergenic | 25.0% |
| !!! | GCAATCATTTACAGTTTTAT+TGG | + | chr7_4:57560324-57560343 | None:intergenic | 25.0% |
| TTAAGTAACTCGATATAGTG+AGG | - | chr7_4:57556304-57556323 | Msa1165620:intron | 30.0% | |
| TCAAAATAGTCCTAAACCTT+AGG | - | chr7_4:57556337-57556356 | Msa1165620:intron | 30.0% | |
| ! | TCTAACTTTTCCTAAGGTTT+AGG | + | chr7_4:57556350-57556369 | None:intergenic | 30.0% |
| ACAATCATACAATTGACACT+AGG | + | chr7_4:57557092-57557111 | None:intergenic | 30.0% | |
| TAGTGTCAATTGTATGATTG+TGG | - | chr7_4:57557091-57557110 | Msa1165620:intron | 30.0% | |
| AGTGTCAATTGTATGATTGT+GGG | - | chr7_4:57557092-57557111 | Msa1165620:intron | 30.0% | |
| ACAGTAGCAATAAGAAAAAG+AGG | - | chr7_4:57557193-57557212 | Msa1165620:CDS | 30.0% | |
| CAGTAGCAATAAGAAAAAGA+GGG | - | chr7_4:57557194-57557213 | Msa1165620:CDS | 30.0% | |
| AGTAGCAATAAGAAAAAGAG+GGG | - | chr7_4:57557195-57557214 | Msa1165620:CDS | 30.0% | |
| AAACCTTTCATGCTAATTTG+GGG | + | chr7_4:57557264-57557283 | None:intergenic | 30.0% | |
| GTAACAAAATTGGTCAAACA+AGG | + | chr7_4:57557295-57557314 | None:intergenic | 30.0% | |
| TACAACCAGCAATAAATTAG+AGG | + | chr7_4:57557352-57557371 | None:intergenic | 30.0% | |
| AGGAAAAACAACCTTATTAG+GGG | + | chr7_4:57557757-57557776 | None:intergenic | 30.0% | |
| !!! | CTGTAGATTTACTTTTTTGG+GGG | - | chr7_4:57557833-57557852 | Msa1165620:intron | 30.0% |
| !!! | TGTAGATTTACTTTTTTGGG+GGG | - | chr7_4:57557834-57557853 | Msa1165620:intron | 30.0% |
| AAGTTACAACTTGAGATTGT+GGG | + | chr7_4:57558019-57558038 | None:intergenic | 30.0% | |
| AAAGTTACAACTTGAGATTG+TGG | + | chr7_4:57558020-57558039 | None:intergenic | 30.0% | |
| ! | ATGGTCCTTGATTGTATTTT+AGG | + | chr7_4:57558093-57558112 | None:intergenic | 30.0% |
| TGCAAACACTATAAAATGGA+AGG | - | chr7_4:57558744-57558763 | Msa1165620:CDS | 30.0% | |
| ATAAGCTCAATGCTATGTTA+TGG | - | chr7_4:57558822-57558841 | Msa1165620:intron | 30.0% | |
| AAGCTTCAATTTCCTTATCT+AGG | - | chr7_4:57559077-57559096 | Msa1165620:intron | 30.0% | |
| GTGTCATAAAATCAAGAAAG+TGG | - | chr7_4:57559147-57559166 | Msa1165620:intron | 30.0% | |
| GAGCTAGTTAATCCTATTTA+AGG | - | chr7_4:57559169-57559188 | Msa1165620:intron | 30.0% | |
| ! | TCTCTACTTGAAAACTCTTT+TGG | + | chr7_4:57559209-57559228 | None:intergenic | 30.0% |
| !!! | TTTTCAAGTAGAGAAGTTCT+GGG | - | chr7_4:57559215-57559234 | Msa1165620:intron | 30.0% |
| TATTGCTACACTCAATGTTA+CGG | - | chr7_4:57559403-57559422 | Msa1165620:intron | 30.0% | |
| ATGATATCACTTACTACAAC+GGG | + | chr7_4:57559689-57559708 | None:intergenic | 30.0% | |
| CATGATATCACTTACTACAA+CGG | + | chr7_4:57559690-57559709 | None:intergenic | 30.0% | |
| AAATGCCCTATAGAAATTAC+AGG | + | chr7_4:57559885-57559904 | None:intergenic | 30.0% | |
| !! | TGTTGCAATTGTTGTTTGTT+TGG | - | chr7_4:57559937-57559956 | Msa1165620:intron | 30.0% |
| AATCCTCATCTTAATTCTCA+TGG | - | chr7_4:57560014-57560033 | Msa1165620:five_prime_UTR | 30.0% | |
| GAAAAAATGACACTAATCCT+TGG | - | chr7_4:57560039-57560058 | Msa1165620:five_prime_UTR | 30.0% | |
| ! | CTGATATCGTTAGTTCTTTA+GGG | - | chr7_4:57560083-57560102 | Msa1165620:five_prime_UTR | 30.0% |
| ! | TCAATTTCCACATGACATTT+TGG | + | chr7_4:57560358-57560377 | None:intergenic | 30.0% |
| ACCTTAGGAAAAGTTAGAAG+AGG | - | chr7_4:57556352-57556371 | Msa1165620:intron | 35.0% | |
| ! | TCCTCTTCTAACTTTTCCTA+AGG | + | chr7_4:57556356-57556375 | None:intergenic | 35.0% |
| CTATGGTGCACAAAATGAAA+AGG | + | chr7_4:57556453-57556472 | None:intergenic | 35.0% | |
| CGAAGGAAGAAATAATGCTA+TGG | + | chr7_4:57556470-57556489 | None:intergenic | 35.0% | |
| ! | ATCTGATTCAAGAGCAGTTT+TGG | + | chr7_4:57556500-57556519 | None:intergenic | 35.0% |
| AAAGTCGATAGATGGAAGAT+GGG | - | chr7_4:57556556-57556575 | Msa1165620:intron | 35.0% | |
| AATCATGTGTAGATGAAAGC+AGG | - | chr7_4:57556593-57556612 | Msa1165620:intron | 35.0% | |
| !! | ATGGTTTAATTTGAGAGCAG+CGG | + | chr7_4:57556665-57556684 | None:intergenic | 35.0% |
| CATCATCATGTATGTCAAGA+TGG | + | chr7_4:57556684-57556703 | None:intergenic | 35.0% | |
| AGAAGCTGAAAGGATTAGAT+AGG | + | chr7_4:57556738-57556757 | None:intergenic | 35.0% | |
| ATGCATAACCAATTCAGAGA+AGG | + | chr7_4:57557064-57557083 | None:intergenic | 35.0% | |
| AACCTTTCATGCTAATTTGG+GGG | + | chr7_4:57557263-57557282 | None:intergenic | 35.0% | |
| TTCTGCCTCTAATTTATTGC+TGG | - | chr7_4:57557344-57557363 | Msa1165620:intron | 35.0% | |
| TTGGAGAAGGTAGAAAGTAA+GGG | - | chr7_4:57557379-57557398 | Msa1165620:intron | 35.0% | |
| GAACAACTTTCAATGAGGTT+AGG | - | chr7_4:57557404-57557423 | Msa1165620:intron | 35.0% | |
| ! | TAGTGTTTTGTCCCCTAATA+AGG | - | chr7_4:57557743-57557762 | Msa1165620:intron | 35.0% |
| GAGAACATTCAGAACATCAT+AGG | + | chr7_4:57557910-57557929 | None:intergenic | 35.0% | |
| ! | TGATGTTCTGAATGTTCTCA+TGG | - | chr7_4:57557911-57557930 | Msa1165620:intron | 35.0% |
| GGCAATGGATATTATTTCCA+AGG | - | chr7_4:57557932-57557951 | Msa1165620:intron | 35.0% | |
| ! | TTTAGCTTCTCAATAGCACT+AGG | + | chr7_4:57557990-57558009 | None:intergenic | 35.0% |
| ! | TAGTGCTATTGAGAAGCTAA+AGG | - | chr7_4:57557989-57558008 | Msa1165620:intron | 35.0% |
| TTAATTCAGAACATCACTGC+AGG | + | chr7_4:57558069-57558088 | None:intergenic | 35.0% | |
| ATTCAACAGATCGAATGTCT+AGG | - | chr7_4:57558127-57558146 | Msa1165620:intron | 35.0% | |
| TTCAACAGATCGAATGTCTA+GGG | - | chr7_4:57558128-57558147 | Msa1165620:intron | 35.0% | |
| ! | AAGCAAAGTATCCTACCTAA+AGG | - | chr7_4:57558168-57558187 | Msa1165620:intron | 35.0% |
| AAACACAAGACACTACAGAA+AGG | + | chr7_4:57558313-57558332 | None:intergenic | 35.0% | |
| ATTGCTCATTTCGTTGAACA+AGG | + | chr7_4:57558391-57558410 | None:intergenic | 35.0% | |
| AAAGATAAATCTCCGCTTGA+AGG | + | chr7_4:57558431-57558450 | None:intergenic | 35.0% | |
| !!! | TTTACCTTTTGTTCTGGTTC+AGG | - | chr7_4:57558448-57558467 | Msa1165620:intron | 35.0% |
| ATCACACAATTGAAGATCCA+AGG | + | chr7_4:57558537-57558556 | None:intergenic | 35.0% | |
| CAGCTGCAAACACTATAAAA+TGG | - | chr7_4:57558740-57558759 | Msa1165620:CDS | 35.0% | |
| GCTATGTTATGGAGAATTCT+TGG | - | chr7_4:57558833-57558852 | Msa1165620:intron | 35.0% | |
| !! | TAGAAACTTTTTCCGATCTG+TGG | + | chr7_4:57558859-57558878 | None:intergenic | 35.0% |
| !! | ACAAAATCTGTTTTTCCTGC+TGG | - | chr7_4:57558895-57558914 | Msa1165620:intron | 35.0% |
| ACAGTATACAGACCTAGATA+AGG | + | chr7_4:57559092-57559111 | None:intergenic | 35.0% | |
| ! | CTACTTGAAAACTCTTTTGG+TGG | + | chr7_4:57559206-57559225 | None:intergenic | 35.0% |
| !!! | GTTTTCAAGTAGAGAAGTTC+TGG | - | chr7_4:57559214-57559233 | Msa1165620:intron | 35.0% |
| ! | TGGAATTTTGTGATAGACCT+CGG | - | chr7_4:57559375-57559394 | Msa1165620:intron | 35.0% |
| ACCTTAAGTATTCCAGAAAG+CGG | + | chr7_4:57559521-57559540 | None:intergenic | 35.0% | |
| !! | GAAAGTACTTGATGAATGGT+AGG | + | chr7_4:57559622-57559641 | None:intergenic | 35.0% |
| TGATATCACTTACTACAACG+GGG | + | chr7_4:57559688-57559707 | None:intergenic | 35.0% | |
| CGTTGTAGTAAGTGATATCA+TGG | - | chr7_4:57559688-57559707 | Msa1165620:intron | 35.0% | |
| TAGTAAGTGATATCATGGAC+TGG | - | chr7_4:57559693-57559712 | Msa1165620:intron | 35.0% | |
| GTGTTCTATCACAACTTTGA+TGG | - | chr7_4:57559808-57559827 | Msa1165620:intron | 35.0% | |
| GCGAAATTCAACAATGTTTC+TGG | - | chr7_4:57559982-57560001 | Msa1165620:five_prime_UTR | 35.0% | |
| CTTCCATGAGAATTAAGATG+AGG | + | chr7_4:57560020-57560039 | None:intergenic | 35.0% | |
| TTTGTCATTCTCAATTCCCA+AGG | + | chr7_4:57560059-57560078 | None:intergenic | 35.0% | |
| ! | GCTGATATCGTTAGTTCTTT+AGG | - | chr7_4:57560082-57560101 | Msa1165620:five_prime_UTR | 35.0% |
| ! | TGTTTGTTAGGAAAGCTAAC+TGG | - | chr7_4:57560205-57560224 | Msa1165620:five_prime_UTR | 35.0% |
| TACAACCATCATTACAGCAA+TGG | - | chr7_4:57560235-57560254 | Msa1165620:five_prime_UTR | 35.0% | |
| ACTTACCATTGCTGTAATGA+TGG | + | chr7_4:57560243-57560262 | None:intergenic | 35.0% | |
| TTACAGCAATGGTAAGTCTT+TGG | - | chr7_4:57560246-57560265 | Msa1165620:five_prime_UTR | 35.0% | |
| TTCAGATCCAAAATGTCATG+TGG | - | chr7_4:57560348-57560367 | Msa1165620:five_prime_UTR | 35.0% | |
| ! | GGAAATTGATAGTCTTGCTA+AGG | - | chr7_4:57560369-57560388 | Msa1165620:five_prime_UTR | 35.0% |
| ACGTATTCAGAATTCTCCAA+GGG | + | chr7_4:57560412-57560431 | None:intergenic | 35.0% | |
| AACGTATTCAGAATTCTCCA+AGG | + | chr7_4:57560413-57560432 | None:intergenic | 35.0% | |
| !! | AAGGACAATGATTTTGGCAG+AGG | + | chr7_4:57556434-57556453 | None:intergenic | 40.0% |
| TTGTTGCGAAAGTCGATAGA+TGG | - | chr7_4:57556548-57556567 | Msa1165620:intron | 40.0% | |
| GAAAGTCGATAGATGGAAGA+TGG | - | chr7_4:57556555-57556574 | Msa1165620:intron | 40.0% | |
| ! | GACATACATGATGATGATGC+AGG | - | chr7_4:57556688-57556707 | Msa1165620:intron | 40.0% |
| !! | TTTTTCTAGCATCCCGTTGT+TGG | + | chr7_4:57557221-57557240 | None:intergenic | 40.0% |
| GTTGGAGAAGGTAGAAAGTA+AGG | - | chr7_4:57557378-57557397 | Msa1165620:intron | 40.0% | |
| GGGAAGAACAACTTTCAATG+AGG | - | chr7_4:57557399-57557418 | Msa1165620:intron | 40.0% | |
| CAACTTTCAATGAGGTTAGG+TGG | - | chr7_4:57557407-57557426 | Msa1165620:intron | 40.0% | |
| TCTCTTGCTTCAGTTTCATG+TGG | - | chr7_4:57557463-57557482 | Msa1165620:intron | 40.0% | |
| GGGGACAAAACACTATTCAT+TGG | + | chr7_4:57557738-57557757 | None:intergenic | 40.0% | |
| TCTGAATGTTCTCATGGCAA+TGG | - | chr7_4:57557917-57557936 | Msa1165620:intron | 40.0% | |
| !!! | GTAACTTTTTTTCCCCCATG+TGG | - | chr7_4:57558032-57558051 | Msa1165620:intron | 40.0% |
| AGGTAAAGCTTAAGCCACAT+GGG | + | chr7_4:57558049-57558068 | None:intergenic | 40.0% | |
| ATCCTACCTAAAGGAGTTTG+AGG | - | chr7_4:57558177-57558196 | Msa1165620:intron | 40.0% | |
| TTCCTCAAACTCCTTTAGGT+AGG | + | chr7_4:57558182-57558201 | None:intergenic | 40.0% | |
| CTTGTTCCTCAAACTCCTTT+AGG | + | chr7_4:57558186-57558205 | None:intergenic | 40.0% | |
| TGCTGCACTTGATTACAAGA+AGG | - | chr7_4:57558268-57558287 | Msa1165620:CDS | 40.0% | |
| AAGGAAGCGATATGTTAGTC+AGG | + | chr7_4:57558294-57558313 | None:intergenic | 40.0% | |
| AGATCAGGAAATCCTTCAAG+CGG | - | chr7_4:57558416-57558435 | Msa1165620:intron | 40.0% | |
| TGTACCTGAACCAGAACAAA+AGG | + | chr7_4:57558455-57558474 | None:intergenic | 40.0% | |
| ! | GCATATGTTTTGTGGTGAGT+TGG | + | chr7_4:57558578-57558597 | None:intergenic | 40.0% |
| CTAGGAATTAACAAAGCAGC+TGG | + | chr7_4:57558659-57558678 | None:intergenic | 40.0% | |
| TCAAGTTCAACAGTTGCATG+AGG | + | chr7_4:57558997-57559016 | None:intergenic | 40.0% | |
| TGCAACTGTTGAACTTGAAG+TGG | - | chr7_4:57558999-57559018 | Msa1165620:intron | 40.0% | |
| CTACTATGTGCTCAAAGCAA+TGG | - | chr7_4:57559355-57559374 | Msa1165620:intron | 40.0% | |
| ATTGACACGCTTGAAACTGA+AGG | + | chr7_4:57559479-57559498 | None:intergenic | 40.0% | |
| CAGTTTCAAGCGTGTCAATT+AGG | - | chr7_4:57559480-57559499 | Msa1165620:intron | 40.0% | |
| TTAAGTATTCCAGAAAGCGG+AGG | + | chr7_4:57559518-57559537 | None:intergenic | 40.0% | |
| !! | TCCGCTTTCTGGAATACTTA+AGG | - | chr7_4:57559517-57559536 | Msa1165620:intron | 40.0% |
| ACTTGATGAATGGTAGGCAA+AGG | + | chr7_4:57559616-57559635 | None:intergenic | 40.0% | |
| GACTGGAGTCCAACAAAAAT+AGG | - | chr7_4:57559710-57559729 | Msa1165620:intron | 40.0% | |
| TGTTGAATTTCGCATGCTCA+AGG | + | chr7_4:57559975-57559994 | None:intergenic | 40.0% | |
| !!! | TACGTTTTAACTGCTGCAAC+TGG | - | chr7_4:57560427-57560446 | Msa1165620:five_prime_UTR | 40.0% |
| ! | GATGATGATGCAGGATCACA+AGG | - | chr7_4:57556697-57556716 | Msa1165620:intron | 45.0% |
| CGTCTTCTCCTTCTCTGAAT+TGG | - | chr7_4:57557053-57557072 | Msa1165620:intron | 45.0% | |
| AAAATCGATCCGCACCAACT+CGG | - | chr7_4:57557163-57557182 | Msa1165620:CDS | 45.0% | |
| AGAAAAAGAGGGGCCAACAA+CGG | - | chr7_4:57557205-57557224 | Msa1165620:CDS | 45.0% | |
| CTCCCCCAAATTAGCATGAA+AGG | - | chr7_4:57557258-57557277 | Msa1165620:CDS | 45.0% | |
| ! | TTGCTGGTTGTATGCAGTGT+TGG | - | chr7_4:57557360-57557379 | Msa1165620:intron | 45.0% |
| ! | GTTGTATGCAGTGTTGGAGA+AGG | - | chr7_4:57557366-57557385 | Msa1165620:intron | 45.0% |
| ATGAGAAAAACGTCCGTCGA+AGG | - | chr7_4:57557883-57557902 | Msa1165620:intron | 45.0% | |
| TGAGAAAAACGTCCGTCGAA+GGG | - | chr7_4:57557884-57557903 | Msa1165620:intron | 45.0% | |
| AGCTTCTCAATAGCACTAGG+AGG | + | chr7_4:57557987-57558006 | None:intergenic | 45.0% | |
| GTAAAGCTTAAGCCACATGG+GGG | + | chr7_4:57558047-57558066 | None:intergenic | 45.0% | |
| GGTAAAGCTTAAGCCACATG+GGG | + | chr7_4:57558048-57558067 | None:intergenic | 45.0% | |
| CAGGTAAAGCTTAAGCCACA+TGG | + | chr7_4:57558050-57558069 | None:intergenic | 45.0% | |
| GTAATCAAGTGCAGCAAACC+AGG | + | chr7_4:57558264-57558283 | None:intergenic | 45.0% | |
| CAAACGAATGTCCACAGAAG+AGG | + | chr7_4:57558695-57558714 | None:intergenic | 45.0% | |
| GAGAATTCTTGGCCACAGAT+CGG | - | chr7_4:57558844-57558863 | Msa1165620:intron | 45.0% | |
| TCCTGCTGGATGCTTTAATG+TGG | - | chr7_4:57558909-57558928 | Msa1165620:CDS | 45.0% | |
| ! | ACCACATTAAAGCATCCAGC+AGG | + | chr7_4:57558913-57558932 | None:intergenic | 45.0% |
| !! | GTCTCTGCTTGGCCTTAAAT+AGG | + | chr7_4:57559184-57559203 | None:intergenic | 45.0% |
| !! | TCAAGTAGAGAAGTTCTGGG+AGG | - | chr7_4:57559218-57559237 | Msa1165620:intron | 45.0% |
| ! | TGATGCTTTTGTCCCTGTGT+TGG | - | chr7_4:57559255-57559274 | Msa1165620:CDS | 45.0% |
| ! | GATGCTTTTGTCCCTGTGTT+GGG | - | chr7_4:57559256-57559275 | Msa1165620:CDS | 45.0% |
| CAGTTACATCTCCCAACACA+GGG | + | chr7_4:57559270-57559289 | None:intergenic | 45.0% | |
| ACAGTTACATCTCCCAACAC+AGG | + | chr7_4:57559271-57559290 | None:intergenic | 45.0% | |
| !! | AGAGTACTGCAGAGAGAGAA+GGG | + | chr7_4:57559317-57559336 | None:intergenic | 45.0% |
| !! | AAGAGTACTGCAGAGAGAGA+AGG | + | chr7_4:57559318-57559337 | None:intergenic | 45.0% |
| AGTGTAGCAATATCTCTCCG+AGG | + | chr7_4:57559395-57559414 | None:intergenic | 45.0% | |
| GCTACACTCAATGTTACGGA+AGG | - | chr7_4:57559407-57559426 | Msa1165620:intron | 45.0% | |
| ACACTCAATGTTACGGAAGG+AGG | - | chr7_4:57559410-57559429 | Msa1165620:intron | 45.0% | |
| CACTCAATGTTACGGAAGGA+GGG | - | chr7_4:57559411-57559430 | Msa1165620:intron | 45.0% | |
| ACTCAATGTTACGGAAGGAG+GGG | - | chr7_4:57559412-57559431 | Msa1165620:intron | 45.0% | |
| TGACGGTGATACTTTGTCAG+GGG | + | chr7_4:57560301-57560320 | None:intergenic | 45.0% | |
| GTGACGGTGATACTTTGTCA+GGG | + | chr7_4:57560302-57560321 | None:intergenic | 45.0% | |
| GAATGACACACAGTTTCCCT+TGG | - | chr7_4:57560393-57560412 | Msa1165620:five_prime_UTR | 45.0% | |
| !!! | GCAGTTTTGGTTTCGAGCGA+AGG | + | chr7_4:57556487-57556506 | None:intergenic | 50.0% |
| ! | GTAGATGAAAGCAGGAGTGC+TGG | - | chr7_4:57556601-57556620 | Msa1165620:intron | 50.0% |
| !!! | GTGCTGGTTTTCCATCTAGC+CGG | - | chr7_4:57556617-57556636 | Msa1165620:intron | 50.0% |
| GAAGGAGAAGACGAAGACGA+AGG | + | chr7_4:57557046-57557065 | None:intergenic | 50.0% | |
| CTACTGTGTAGACACCGAGT+TGG | + | chr7_4:57557180-57557199 | None:intergenic | 50.0% | |
| GAAAAAGAGGGGCCAACAAC+GGG | - | chr7_4:57557206-57557225 | Msa1165620:CDS | 50.0% | |
| CTAGGTGGCAGATGAACTTG+TGG | - | chr7_4:57557698-57557717 | Msa1165620:intron | 50.0% | |
| GAACATCATAGGCCCTTCGA+CGG | + | chr7_4:57557899-57557918 | None:intergenic | 50.0% | |
| !! | CTCTTTTGGTGGTCTCTGCT+TGG | + | chr7_4:57559195-57559214 | None:intergenic | 50.0% |
| !!! | GAAGTTCTGGGAGGCAGTTT+TGG | - | chr7_4:57559227-57559246 | Msa1165620:intron | 50.0% |
| AATGTTACGGAAGGAGGGGA+AGG | - | chr7_4:57559416-57559435 | Msa1165620:intron | 50.0% | |
| GACACGCTTGAAACTGAAGG+AGG | + | chr7_4:57559476-57559495 | None:intergenic | 50.0% | |
| AAGCGTGTCAATTAGGCCTC+AGG | - | chr7_4:57559487-57559506 | Msa1165620:intron | 50.0% | |
| ! | GGTGACGGTGATACTTTGTC+AGG | + | chr7_4:57560303-57560322 | None:intergenic | 50.0% |
| !! | GTGTAGACACCGAGTTGGTG+CGG | + | chr7_4:57557175-57557194 | None:intergenic | 55.0% |
| AAGTGCAGCAAACCAGGTCC+AGG | + | chr7_4:57558258-57558277 | None:intergenic | 55.0% | |
| !! | GGGGAAGGTTCTAGCTTGTC+AGG | - | chr7_4:57559431-57559450 | Msa1165620:intron | 55.0% |
| GTCAGGCTTGCATCAGTTGC+AGG | - | chr7_4:57559448-57559467 | Msa1165620:intron | 55.0% | |
| GGAAGATGGGAACGCGACTG+CGG | - | chr7_4:57556569-57556588 | Msa1165620:intron | 60.0% | |
| GGGGATGATGTCCTCAGTCC+TGG | - | chr7_4:57558237-57558256 | Msa1165620:CDS | 60.0% | |
| GATGTCCTCAGTCCTGGACC+TGG | - | chr7_4:57558243-57558262 | Msa1165620:CDS | 60.0% | |
| GCAAACCAGGTCCAGGACTG+AGG | + | chr7_4:57558251-57558270 | None:intergenic | 60.0% | |
| GAAAGCGGAGGTGATGCCTG+AGG | + | chr7_4:57559506-57559525 | None:intergenic | 60.0% | |
| CAGGCATCACCTCCGCTTTC+TGG | - | chr7_4:57559506-57559525 | Msa1165620:intron | 60.0% | |
| !! | GTCGGCTCGCTCCGGCTAGA+TGG | + | chr7_4:57556631-57556650 | None:intergenic | 70.0% |
| !! | TCTGCGTCGTCGGCTCGCTC+CGG | + | chr7_4:57556639-57556658 | None:intergenic | 70.0% |
| GCAGCGGCTGTCTGCGTCGT+CGG | + | chr7_4:57556649-57556668 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 57556217 | 57560450 | 57556217 | ID=Msa1165620;Name=Msa1165620 |
| chr7_4 | mRNA | 57556217 | 57560450 | 57556217 | ID=Msa1165620-mRNA-1;Parent=Msa1165620;Name=Msa1165620-mRNA-1;_AED=0.07;_eAED=0.07;_QI=478|1|0.9|1|0.88|1|10|0|292 |
| chr7_4 | exon | 57556217 | 57556314 | 57556217 | ID=Msa1165620-mRNA-1:exon:17459;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57556411 | 57556447 | 57556411 | ID=Msa1165620-mRNA-1:exon:17458;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57557129 | 57557336 | 57557129 | ID=Msa1165620-mRNA-1:exon:17457;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57557594 | 57557679 | 57557594 | ID=Msa1165620-mRNA-1:exon:17456;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57558198 | 57558296 | 57558198 | ID=Msa1165620-mRNA-1:exon:17455;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57558463 | 57558531 | 57558463 | ID=Msa1165620-mRNA-1:exon:17454;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57558657 | 57558794 | 57558657 | ID=Msa1165620-mRNA-1:exon:17453;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57558903 | 57558965 | 57558903 | ID=Msa1165620-mRNA-1:exon:17452;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57559247 | 57559290 | 57559247 | ID=Msa1165620-mRNA-1:exon:17451;Parent=Msa1165620-mRNA-1 |
| chr7_4 | exon | 57559939 | 57560450 | 57559939 | ID=Msa1165620-mRNA-1:exon:17450;Parent=Msa1165620-mRNA-1 |
| chr7_4 | five_prime_UTR | 57559973 | 57560450 | 57559973 | ID=Msa1165620-mRNA-1:five_prime_utr;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57559939 | 57559972 | 57559939 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57559247 | 57559290 | 57559247 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57558903 | 57558965 | 57558903 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57558657 | 57558794 | 57558657 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57558463 | 57558531 | 57558463 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57558198 | 57558296 | 57558198 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57557594 | 57557679 | 57557594 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57557129 | 57557336 | 57557129 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57556411 | 57556447 | 57556411 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| chr7_4 | CDS | 57556217 | 57556314 | 57556217 | ID=Msa1165620-mRNA-1:cds;Parent=Msa1165620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
