Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362190 | XP_013456630.1 | 76.987 | 239 | 47 | 3 | 12 | 247 | 104 | 337 | 5.99e-125 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362190 | sp|Q9FNY2|DPB_ARATH | 70.681 | 191 | 48 | 3 | 12 | 199 | 111 | 296 | 3.94e-89 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362190 | A0A072UMP7 | 76.987 | 239 | 47 | 3 | 12 | 247 | 104 | 337 | 2.86e-125 | 370 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1362190 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0748370 | Msa1362190 | 0.918071 | 2.448647e-86 | -8.615850e-47 |
| Msa1165620 | Msa1362190 | 0.877221 | 7.478835e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362190 | MtrunA17_Chr4g0039751 | 76.987 | 239 | 47 | 3 | 12 | 247 | 104 | 337 | 5.51e-129 | 370 |
| Msa1362190 | MtrunA17_Chr4g0039741 | 69.710 | 241 | 63 | 4 | 12 | 247 | 100 | 335 | 1.60e-116 | 338 |
| Msa1362190 | MtrunA17_Chr7g0269651 | 93.496 | 123 | 8 | 0 | 169 | 291 | 1 | 123 | 1.58e-73 | 243 |
| Msa1362190 | MtrunA17_Chr7g0269641 | 88.496 | 113 | 13 | 0 | 12 | 124 | 80 | 192 | 3.32e-65 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362190 | AT5G03415.2 | 71.354 | 192 | 47 | 3 | 11 | 199 | 104 | 290 | 3.61e-91 | 276 |
| Msa1362190 | AT5G03415.1 | 70.681 | 191 | 48 | 3 | 12 | 199 | 111 | 296 | 4.00e-90 | 273 |
| Msa1362190 | AT5G02470.3 | 43.915 | 189 | 95 | 5 | 11 | 194 | 60 | 242 | 2.12e-51 | 171 |
| Msa1362190 | AT5G02470.1 | 43.915 | 189 | 95 | 5 | 11 | 194 | 60 | 242 | 2.12e-51 | 171 |
| Msa1362190 | AT5G02470.2 | 43.915 | 189 | 95 | 5 | 11 | 194 | 60 | 242 | 2.12e-51 | 171 |
Find 82 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGTAGCTTATTGATTT+AGG | 0.131004 | tig0017690:-311843 | Msa1362190:five_prime_UTR |
| CAGGCATCACCTCCGCTTTC+TGG | 0.140961 | tig0017690:-308622 | Msa1362190:CDS |
| TCAATTTCCACATGACATTT+TGG | 0.179498 | tig0017690:+307772 | None:intergenic |
| AATGAAAAGGACAATGATTT+TGG | 0.189333 | tig0017690:+311781 | None:intergenic |
| GTCAGGCTTGCATCAGTTGC+AGG | 0.260541 | tig0017690:-308680 | Msa1362190:CDS |
| TATTATTTCCAAGGATAAAA+AGG | 0.267147 | tig0017690:-310187 | Msa1362190:CDS |
| AACTGTAGCTTATTGATTTA+GGG | 0.280597 | tig0017690:-311842 | Msa1362190:five_prime_UTR |
| ATCTGATTCAAGAGCAGTTT+TGG | 0.287261 | tig0017690:+311721 | None:intergenic |
| TATTATTGCATCAAGTTTGT+AGG | 0.312560 | tig0017690:-309772 | Msa1362190:intron |
| CAGTTTCAAGCGTGTCAATT+AGG | 0.323437 | tig0017690:-308648 | Msa1362190:CDS |
| CTTGTTCCTCAAGCTCCTTT+AGG | 0.331825 | tig0017690:+309945 | None:intergenic |
| GTTGGAGAAGGTAGAAAGTA+AGG | 0.363432 | tig0017690:-310840 | Msa1362190:CDS |
| TCCGCTTTCTGGAATACTTA+AGG | 0.378685 | tig0017690:-308611 | Msa1362190:intron |
| GTCGGCTCGCTCCGGCTAGA+TGG | 0.379241 | tig0017690:+311590 | None:intergenic |
| TTGTTGCGAAAGTCGATAGA+TGG | 0.385930 | tig0017690:-311670 | Msa1362190:five_prime_UTR |
| GGGGAAGGTTCTAGCTTGTC+AGG | 0.408012 | tig0017690:-308697 | Msa1362190:CDS |
| GGGGACAAAACACTATTCAT+TGG | 0.417434 | tig0017690:+310393 | None:intergenic |
| TCAAAATAGTCCTAAACCTT+AGG | 0.426376 | tig0017690:-311881 | Msa1362190:five_prime_UTR |
| TGTTTGTTAGGAAAGCTAAC+TGG | 0.430033 | tig0017690:-307922 | Msa1362190:intron |
| AAAGATAAATCTCCGCTTGA+AGG | 0.440338 | tig0017690:+309700 | None:intergenic |
| GAGAACATTCAGAACATCAT+AGG | 0.447978 | tig0017690:+310221 | None:intergenic |
| AATGAGCAATTATATAGATC+AGG | 0.460541 | tig0017690:-309727 | Msa1362190:CDS |
| AAGCGTGTCAATTAGGCCTC+AGG | 0.469004 | tig0017690:-308641 | Msa1362190:CDS |
| CTAAAAGTTAAGTGTGGGGT+TGG | 0.482389 | tig0017690:-312002 | Msa1362190:five_prime_UTR |
| TAGTGCTATTGAGAAGCTAA+AGG | 0.482438 | tig0017690:-310139 | Msa1362190:intron |
| GCAGCGGCTGTCTGCGTCGT+CGG | 0.497935 | tig0017690:+311572 | None:intergenic |
| GCAAACTAAAAGTTAAGTGT+GGG | 0.499822 | tig0017690:-312007 | None:intergenic |
| GAAAGTCGATAGATGGAAGA+TGG | 0.500686 | tig0017690:-311663 | Msa1362190:five_prime_UTR |
| TGTACCTGAACCAGAACAAA+AGG | 0.501925 | tig0017690:+309676 | None:intergenic |
| CTATGGTGCACAAAATGAAA+AGG | 0.506225 | tig0017690:+311768 | None:intergenic |
| GGCAATGGATATTATTTCCA+AGG | 0.507516 | tig0017690:-310196 | Msa1362190:CDS |
| ATTCAACAGATCGAATGTCT+AGG | 0.511456 | tig0017690:-310001 | Msa1362190:intron |
| TGCAACTGTTGAACTTGAAG+TGG | 0.513525 | tig0017690:-309129 | Msa1362190:CDS |
| TTCAACAGATCGAATGTCTA+GGG | 0.521141 | tig0017690:-310000 | Msa1362190:intron |
| CATCATCATGTATGTCAAGA+TGG | 0.522280 | tig0017690:+311537 | None:intergenic |
| GAATGACACACAGTTTCCCT+TGG | 0.532011 | tig0017690:-307734 | Msa1362190:CDS |
| ACTTACCATTGCTGTAATGA+TGG | 0.533611 | tig0017690:+307887 | None:intergenic |
| CGCAAACTAAAAGTTAAGTG+TGG | 0.533862 | tig0017690:-312008 | None:intergenic |
| ACACTCAATGTTACGGAAGG+AGG | 0.535766 | tig0017690:-308718 | Msa1362190:CDS |
| TATTGCTACACTCAATGTTA+CGG | 0.535816 | tig0017690:-308725 | Msa1362190:CDS |
| AAGCAAAGTATCCTACCTAA+AGG | 0.541642 | tig0017690:-309960 | Msa1362190:CDS |
| CACTCAATGTTACGGAAGGA+GGG | 0.556476 | tig0017690:-308717 | Msa1362190:CDS |
| ATCCTACCTAAAGGAGCTTG+AGG | 0.557921 | tig0017690:-309951 | Msa1362190:CDS |
| TTGGAGAAGGTAGAAAGTAA+GGG | 0.559901 | tig0017690:-310839 | Msa1362190:CDS |
| AAAGTCGATAGATGGAAGAT+GGG | 0.561763 | tig0017690:-311662 | Msa1362190:five_prime_UTR |
| ATTGCTCATTTCGTTGAACA+AGG | 0.562679 | tig0017690:+309740 | None:intergenic |
| ACCTTAAGTATTCCAGAAAG+CGG | 0.563806 | tig0017690:+308610 | None:intergenic |
| AATCATGTGTAGATGAAAGC+AGG | 0.569304 | tig0017690:-311625 | Msa1362190:five_prime_UTR |
| GAACATCATAGGCCCTTCGA+CGG | 0.570623 | tig0017690:+310232 | None:intergenic |
| TGATGTTCTGAATGTTCTCA+TGG | 0.572407 | tig0017690:-310217 | Msa1362190:CDS |
| TTTAGCTTCTCAATAGCACT+AGG | 0.575236 | tig0017690:+310141 | None:intergenic |
| CGAAGGAAGAAATAATGCTA+TGG | 0.580934 | tig0017690:+311751 | None:intergenic |
| GACATACATGATGATGATGC+AGG | 0.583166 | tig0017690:-311530 | Msa1362190:exon |
| TTCAGATCCAAAATGTCATG+TGG | 0.587452 | tig0017690:-307779 | Msa1362190:intron |
| CTACTATGTGCTCAAAGCAA+TGG | 0.590968 | tig0017690:-308773 | Msa1362190:CDS |
| GATGATGATGCAGGATCACA+AGG | 0.593414 | tig0017690:-311521 | Msa1362190:CDS |
| AACGTATTCAGAATTCTCCA+AGG | 0.597884 | tig0017690:+307717 | None:intergenic |
| TACAACCATCATTACAGCAA+TGG | 0.598226 | tig0017690:-307892 | Msa1362190:intron |
| GTAGATGAAAGCAGGAGTGC+TGG | 0.600296 | tig0017690:-311617 | Msa1362190:five_prime_UTR |
| GTTGTATGCAGTGTTGGAGA+AGG | 0.602504 | tig0017690:-310852 | Msa1362190:intron |
| AATGTTACGGAAGGAGGGGA+AGG | 0.604293 | tig0017690:-308712 | Msa1362190:CDS |
| TCTGAATGTTCTCATGGCAA+TGG | 0.604838 | tig0017690:-310211 | Msa1362190:CDS |
| ACCTTAGGAAAAGTTAGAAG+AGG | 0.610254 | tig0017690:-311866 | Msa1362190:five_prime_UTR |
| TTCCTCAAGCTCCTTTAGGT+AGG | 0.612657 | tig0017690:+309949 | None:intergenic |
| ATGGTTTAATTTGAGAGCAG+CGG | 0.613032 | tig0017690:+311556 | None:intergenic |
| AGCTTCTCAATAGCACTAGG+AGG | 0.614094 | tig0017690:+310144 | None:intergenic |
| CTAGGTGGCAGATGAACTTG+TGG | 0.615812 | tig0017690:-310430 | Msa1362190:intron |
| ACTCAATGTTACGGAAGGAG+GGG | 0.616617 | tig0017690:-308716 | Msa1362190:CDS |
| GGGAAGAACAACTTTCAATG+AGG | 0.618421 | tig0017690:-310819 | Msa1362190:intron |
| ACGTATTCAGAATTCTCCAA+GGG | 0.620753 | tig0017690:+307718 | None:intergenic |
| GGAAGATGGGAACGCGACTG+CGG | 0.633565 | tig0017690:-311649 | Msa1362190:five_prime_UTR |
| ATTGACACGCTTGAAACTGA+AGG | 0.637612 | tig0017690:+308652 | None:intergenic |
| AGATCAGGAAATCCTTCAAG+CGG | 0.637885 | tig0017690:-309712 | Msa1362190:CDS |
| GCTACACTCAATGTTACGGA+AGG | 0.641637 | tig0017690:-308721 | Msa1362190:CDS |
| GGAAATTGATAGTCTTGCTA+AGG | 0.641726 | tig0017690:-307758 | Msa1362190:CDS |
| TTAAGTAACTCGATATAGTG+AGG | 0.647838 | tig0017690:-311914 | Msa1362190:five_prime_UTR |
| CAAACTAAAAGTTAAGTGTG+GGG | 0.655209 | tig0017690:-312006 | None:intergenic |
| TCAAGTTCAACAGTTGCATG+AGG | 0.655545 | tig0017690:+309134 | None:intergenic |
| GAAAGCGGAGGTGATGCCTG+AGG | 0.658645 | tig0017690:+308625 | None:intergenic |
| GACACGCTTGAAACTGAAGG+AGG | 0.686824 | tig0017690:+308655 | None:intergenic |
| TTAAGTATTCCAGAAAGCGG+AGG | 0.697488 | tig0017690:+308613 | None:intergenic |
| AGTGTAGCAATATCTCTCCG+AGG | 0.743133 | tig0017690:+308736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGAATGATAAAAAA+AGG | + | tig0017690:308012-308031 | None:intergenic | 10.0% |
| !! | AGTACAATATTATTAATATT+TGG | + | tig0017690:308419-308438 | None:intergenic | 10.0% |
| !!! | TTTATTGCTATTAAACTTTT+GGG | - | tig0017690:308270-308289 | Msa1362190:intron | 15.0% |
| !! | AATAATAAGAATTATGAAAG+AGG | + | tig0017690:309202-309221 | None:intergenic | 15.0% |
| !!! | ATGTGTTATTTTTATATTCT+AGG | - | tig0017690:309252-309271 | Msa1362190:intron | 15.0% |
| !!! | ATATCATTTTTTCTTGTTTA+GGG | - | tig0017690:311149-311168 | Msa1362190:intron | 15.0% |
| !! | ATCTAATAAATATGTTTGTT+AGG | - | tig0017690:311766-311785 | Msa1362190:five_prime_UTR | 15.0% |
| !!! | GTTTATTGCTATTAAACTTT+TGG | - | tig0017690:308269-308288 | Msa1362190:intron | 20.0% |
| !! | TTATTCAGTTACTTATTTCA+GGG | - | tig0017690:308321-308340 | Msa1362190:intron | 20.0% |
| !! | ATAAGTTCTTAATAAGTCAA+CGG | - | tig0017690:308469-308488 | Msa1362190:intron | 20.0% |
| !! | AAAAATCAAAGAAAGACTTT+AGG | + | tig0017690:308611-308630 | None:intergenic | 20.0% |
| !! | CTGAATAAAAAATTAGTTGA+AGG | + | tig0017690:309111-309130 | None:intergenic | 20.0% |
| !!! | CTTCAACTAATTTTTTATTC+AGG | - | tig0017690:309109-309128 | Msa1362190:CDS | 20.0% |
| !! | TCAAAGTCAAGAAATATATT+AGG | + | tig0017690:309233-309252 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTATATTCTAGG+TGG | - | tig0017690:309255-309274 | Msa1362190:intron | 20.0% |
| !!! | AATTTTGAAACTGTTTGTAA+AGG | + | tig0017690:309349-309368 | None:intergenic | 20.0% |
| !!! | TACTGTAGATTTACTTTTTT+GGG | - | tig0017690:309403-309422 | Msa1362190:intron | 20.0% |
| !! | TATTATTTCCAAGGATAAAA+AGG | - | tig0017690:309513-309532 | Msa1362190:intron | 20.0% |
| !! | TTAATCCTAAAATACAATCA+AGG | - | tig0017690:309657-309676 | Msa1362190:intron | 20.0% |
| !! | TGAATAAAACTGAGTTAAAA+TGG | + | tig0017690:309684-309703 | None:intergenic | 20.0% |
| !! | CACTCTAATAGATTTAATAT+GGG | - | tig0017690:309789-309808 | Msa1362190:intron | 20.0% |
| !! | ACTCTAATAGATTTAATATG+GGG | - | tig0017690:309790-309809 | Msa1362190:intron | 20.0% |
| !!! | TTCTGAAAAAATAGCAAAAA+AGG | + | tig0017690:310066-310085 | None:intergenic | 20.0% |
| !! | GTGTGATAATTAGATTATAT+TGG | - | tig0017690:310122-310141 | Msa1362190:intron | 20.0% |
| !! | AAAACATATGCTTAATTAGT+TGG | - | tig0017690:310159-310178 | Msa1362190:CDS | 20.0% |
| !! | AGAGGAAAAAAAATATTTCT+AGG | + | tig0017690:310249-310268 | None:intergenic | 20.0% |
| !! | TTGAGCTTATATAAATCTAA+AGG | + | tig0017690:310384-310403 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | tig0017690:310624-310643 | Msa1362190:intron | 20.0% |
| !!! | GATATCATTTTTTCTTGTTT+AGG | - | tig0017690:311148-311167 | Msa1362190:intron | 20.0% |
| !! | AAAAGTCATAGCAAAATATA+TGG | + | tig0017690:311237-311256 | None:intergenic | 20.0% |
| !!! | GAAATTAATCCTATTTTTGT+TGG | + | tig0017690:311294-311313 | None:intergenic | 20.0% |
| !! | AATAGGATTAATTTCAGAAT+TGG | - | tig0017690:311299-311318 | Msa1362190:intron | 20.0% |
| !! | TTGTCTTGTATTATTTACTA+CGG | - | tig0017690:311341-311360 | Msa1362190:intron | 20.0% |
| !! | ATGACATTCAAAAGAAAATT+GGG | + | tig0017690:311415-311434 | None:intergenic | 20.0% |
| !! | ATTTACCTGTAATTTCTATA+GGG | - | tig0017690:311449-311468 | Msa1362190:intron | 20.0% |
| !!! | CATGAACTTAGTTTTCATAT+AGG | + | tig0017690:307764-307783 | None:intergenic | 25.0% |
| !!! | AAACTGTAGCTTATTGATTT+AGG | - | tig0017690:307857-307876 | Msa1362190:intron | 25.0% |
| !!! | AACTGTAGCTTATTGATTTA+GGG | - | tig0017690:307858-307877 | Msa1362190:intron | 25.0% |
| !! | AATGAAAAGGACAATGATTT+TGG | + | tig0017690:307922-307941 | None:intergenic | 25.0% |
| ! | TACATTTATTAGAAGCTGAA+AGG | + | tig0017690:308230-308249 | None:intergenic | 25.0% |
| ! | CTTATTCAGTTACTTATTTC+AGG | - | tig0017690:308320-308339 | Msa1362190:intron | 25.0% |
| !! | CTTTCATTCATGAACTATTT+TGG | - | tig0017690:308356-308375 | Msa1362190:intron | 25.0% |
| !!! | CATGAACTATTTTGGAAAAA+CGG | - | tig0017690:308364-308383 | Msa1362190:intron | 25.0% |
| ! | AGAAAAAATAAGAGTAGAAG+AGG | - | tig0017690:308716-308735 | Msa1362190:CDS | 25.0% |
| ! | GAAAAAATAAGAGTAGAAGA+GGG | - | tig0017690:308717-308736 | Msa1362190:CDS | 25.0% |
| ! | AAAACCTTTCATGCTAATTT+GGG | + | tig0017690:308747-308766 | None:intergenic | 25.0% |
| ! | AAAAACCTTTCATGCTAATT+TGG | + | tig0017690:308748-308767 | None:intergenic | 25.0% |
| ! | TGAACAGTATGTAACAAAAT+TGG | + | tig0017690:308787-308806 | None:intergenic | 25.0% |
| !!! | TTCATTGACTTTTTTCTTTC+TGG | - | tig0017690:308803-308822 | Msa1362190:intron | 25.0% |
| !!! | ATTTTTTATTCAGGAACTTG+TGG | - | tig0017690:309118-309137 | Msa1362190:CDS | 25.0% |
| ! | AAGGAAAAACAACCTTATTA+GGG | + | tig0017690:309330-309349 | None:intergenic | 25.0% |
| ! | AAAGGAAAAACAACCTTATT+AGG | + | tig0017690:309331-309350 | None:intergenic | 25.0% |
| !!! | GTACTGTAGATTTACTTTTT+TGG | - | tig0017690:309402-309421 | Msa1362190:intron | 25.0% |
| !!! | ACTGTAGATTTACTTTTTTG+GGG | - | tig0017690:309404-309423 | Msa1362190:intron | 25.0% |
| !! | TTGTATTTCCTTTTTATCCT+TGG | + | tig0017690:309524-309543 | None:intergenic | 25.0% |
| ! | AGGATAAAAAGGAAATACAA+TGG | - | tig0017690:309524-309543 | Msa1362190:intron | 25.0% |
| ! | TAAAAAGGAAATACAATGGA+AGG | - | tig0017690:309528-309547 | Msa1362190:intron | 25.0% |
| ! | AAAAAGGAAATACAATGGAA+GGG | - | tig0017690:309529-309548 | Msa1362190:intron | 25.0% |
| ! | TTAAATCTATTAGAGTGGAA+TGG | + | tig0017690:309786-309805 | None:intergenic | 25.0% |
| ! | CCATATTAAATCTATTAGAG+TGG | + | tig0017690:309791-309810 | None:intergenic | 25.0% |
| ! | CCACTCTAATAGATTTAATA+TGG | - | tig0017690:309788-309807 | Msa1362190:intron | 25.0% |
| ! | TATTATTGCATCAAGTTTGT+AGG | - | tig0017690:309928-309947 | Msa1362190:intron | 25.0% |
| ! | AATGAGCAATTATATAGATC+AGG | - | tig0017690:309973-309992 | Msa1362190:CDS | 25.0% |
| !! | TTTATCTTTACCTTTTGTTC+TGG | - | tig0017690:310014-310033 | Msa1362190:intron | 25.0% |
| ! | AAAAAGGTAGATAATGATGA+TGG | + | tig0017690:310050-310069 | None:intergenic | 25.0% |
| !! | AATGTTGTTCAATTTTACCT+TGG | - | tig0017690:310089-310108 | Msa1362190:intron | 25.0% |
| !! | CTAATTAAGCATATGTTTTG+TGG | + | tig0017690:310158-310177 | None:intergenic | 25.0% |
| !!! | ATATTTTTTTTCCTCTTCTG+TGG | - | tig0017690:310253-310272 | Msa1362190:CDS | 25.0% |
| ! | ACACTACTTGATACTTAATT+AGG | + | tig0017690:310703-310722 | None:intergenic | 25.0% |
| !!! | TTAAGAAAGTACTTGATGAA+TGG | + | tig0017690:311198-311217 | None:intergenic | 25.0% |
| ! | GATTAATTTCAGAATTGGTT+AGG | - | tig0017690:311304-311323 | Msa1362190:intron | 25.0% |
| ! | GATGACATTCAAAAGAAAAT+TGG | + | tig0017690:311416-311435 | None:intergenic | 25.0% |
| ! | GATTTACCTGTAATTTCTAT+AGG | - | tig0017690:311448-311467 | Msa1362190:intron | 25.0% |
| ! | AAAAAATGACACTAATCCTT+GGG | - | tig0017690:311612-311631 | Msa1362190:five_prime_UTR | 25.0% |
| !!! | ACAATGTTGAAAATTTTAGC+TGG | + | tig0017690:311723-311742 | None:intergenic | 25.0% |
| !!! | ATTTACAGTTTTATTGGTGA+CGG | + | tig0017690:311891-311910 | None:intergenic | 25.0% |
| !!! | GCAATCATTTACAGTTTTAT+TGG | + | tig0017690:311897-311916 | None:intergenic | 25.0% |
| TTAAGTAACTCGATATAGTG+AGG | - | tig0017690:307786-307805 | Msa1362190:intron | 30.0% | |
| TCAAAATAGTCCTAAACCTT+AGG | - | tig0017690:307819-307838 | Msa1362190:intron | 30.0% | |
| ! | TCTAACTTTTCCTAAGGTTT+AGG | + | tig0017690:307832-307851 | None:intergenic | 30.0% |
| ACAATCATACAATTGACACT+AGG | + | tig0017690:308574-308593 | None:intergenic | 30.0% | |
| TAGTGTCAATTGTATGATTG+TGG | - | tig0017690:308573-308592 | Msa1362190:intron | 30.0% | |
| AGTGTCAATTGTATGATTGT+GGG | - | tig0017690:308574-308593 | Msa1362190:intron | 30.0% | |
| AAACCTTTCATGCTAATTTG+GGG | + | tig0017690:308746-308765 | None:intergenic | 30.0% | |
| GTAACAAAATTGGTCAAACA+AGG | + | tig0017690:308777-308796 | None:intergenic | 30.0% | |
| TACAACCAGCAATAAATTAG+AGG | + | tig0017690:308834-308853 | None:intergenic | 30.0% | |
| AGGAAAAACAACCTTATTAG+GGG | + | tig0017690:309329-309348 | None:intergenic | 30.0% | |
| !!! | CTGTAGATTTACTTTTTTGG+GGG | - | tig0017690:309405-309424 | Msa1362190:intron | 30.0% |
| !!! | TGTAGATTTACTTTTTTGGG+GGG | - | tig0017690:309406-309425 | Msa1362190:intron | 30.0% |
| AAGTTACAACTTGAGATTGT+GGG | + | tig0017690:309591-309610 | None:intergenic | 30.0% | |
| AAAGTTACAACTTGAGATTG+TGG | + | tig0017690:309592-309611 | None:intergenic | 30.0% | |
| ! | ATGGTCCTTGATTGTATTTT+AGG | + | tig0017690:309665-309684 | None:intergenic | 30.0% |
| TGCAAACACTATAAAATGGA+AGG | - | tig0017690:310316-310335 | Msa1362190:intron | 30.0% | |
| ATAAGCTCAATGCTATGTTA+TGG | - | tig0017690:310394-310413 | Msa1362190:CDS | 30.0% | |
| AAGCTTCAATTTCCTTATCT+AGG | - | tig0017690:310649-310668 | Msa1362190:intron | 30.0% | |
| GTGTCATAAAATCAAGAAAG+TGG | - | tig0017690:310719-310738 | Msa1362190:intron | 30.0% | |
| GAGCTAGTTAATCCTATTTA+AGG | - | tig0017690:310741-310760 | Msa1362190:intron | 30.0% | |
| ! | TCTCTACTTGAAAACTCTTT+TGG | + | tig0017690:310781-310800 | None:intergenic | 30.0% |
| !!! | TTTTCAAGTAGAGAAGTTCT+GGG | - | tig0017690:310787-310806 | Msa1362190:intron | 30.0% |
| TATTGCTACACTCAATGTTA+CGG | - | tig0017690:310975-310994 | Msa1362190:intron | 30.0% | |
| ATGATATCACTTACTACAAC+GGG | + | tig0017690:311261-311280 | None:intergenic | 30.0% | |
| CATGATATCACTTACTACAA+CGG | + | tig0017690:311262-311281 | None:intergenic | 30.0% | |
| AAATGCCCTATAGAAATTAC+AGG | + | tig0017690:311457-311476 | None:intergenic | 30.0% | |
| !! | TGTTGCAATTGTTGTTTGTT+TGG | - | tig0017690:311509-311528 | Msa1362190:intron | 30.0% |
| AATCCTCATCTTAATTCTCA+TGG | - | tig0017690:311586-311605 | Msa1362190:five_prime_UTR | 30.0% | |
| GAAAAAATGACACTAATCCT+TGG | - | tig0017690:311611-311630 | Msa1362190:five_prime_UTR | 30.0% | |
| ! | CTGATATCGTTAGTTCTTTA+GGG | - | tig0017690:311655-311674 | Msa1362190:five_prime_UTR | 30.0% |
| ! | TCAATTTCCACATGACATTT+TGG | + | tig0017690:311931-311950 | None:intergenic | 30.0% |
| ACCTTAGGAAAAGTTAGAAG+AGG | - | tig0017690:307834-307853 | Msa1362190:intron | 35.0% | |
| ! | TCCTCTTCTAACTTTTCCTA+AGG | + | tig0017690:307838-307857 | None:intergenic | 35.0% |
| CTATGGTGCACAAAATGAAA+AGG | + | tig0017690:307935-307954 | None:intergenic | 35.0% | |
| CGAAGGAAGAAATAATGCTA+TGG | + | tig0017690:307952-307971 | None:intergenic | 35.0% | |
| ! | ATCTGATTCAAGAGCAGTTT+TGG | + | tig0017690:307982-308001 | None:intergenic | 35.0% |
| AAAGTCGATAGATGGAAGAT+GGG | - | tig0017690:308038-308057 | Msa1362190:intron | 35.0% | |
| AATCATGTGTAGATGAAAGC+AGG | - | tig0017690:308075-308094 | Msa1362190:intron | 35.0% | |
| !! | ATGGTTTAATTTGAGAGCAG+CGG | + | tig0017690:308147-308166 | None:intergenic | 35.0% |
| CATCATCATGTATGTCAAGA+TGG | + | tig0017690:308166-308185 | None:intergenic | 35.0% | |
| AGAAGCTGAAAGGATTAGAT+AGG | + | tig0017690:308220-308239 | None:intergenic | 35.0% | |
| ATGCATAACCAATTCAGAGA+AGG | + | tig0017690:308546-308565 | None:intergenic | 35.0% | |
| ACAGTAGCAAGAAGAAAAAG+AGG | - | tig0017690:308675-308694 | Msa1362190:CDS | 35.0% | |
| CAGTAGCAAGAAGAAAAAGA+GGG | - | tig0017690:308676-308695 | Msa1362190:CDS | 35.0% | |
| AGTAGCAAGAAGAAAAAGAG+GGG | - | tig0017690:308677-308696 | Msa1362190:CDS | 35.0% | |
| AACCTTTCATGCTAATTTGG+GGG | + | tig0017690:308745-308764 | None:intergenic | 35.0% | |
| TTCTGCCTCTAATTTATTGC+TGG | - | tig0017690:308826-308845 | Msa1362190:intron | 35.0% | |
| TTGGAGAAGGTAGAAAGTAA+GGG | - | tig0017690:308861-308880 | Msa1362190:intron | 35.0% | |
| GAACAACTTTCAATGAGGTT+AGG | - | tig0017690:308886-308905 | Msa1362190:intron | 35.0% | |
| ! | TAGTGTTTTGTCCCCTAATA+AGG | - | tig0017690:309315-309334 | Msa1362190:intron | 35.0% |
| GAGAACATTCAGAACATCAT+AGG | + | tig0017690:309482-309501 | None:intergenic | 35.0% | |
| ! | TGATGTTCTGAATGTTCTCA+TGG | - | tig0017690:309483-309502 | Msa1362190:intron | 35.0% |
| GGCAATGGATATTATTTCCA+AGG | - | tig0017690:309504-309523 | Msa1362190:intron | 35.0% | |
| ! | TTTAGCTTCTCAATAGCACT+AGG | + | tig0017690:309562-309581 | None:intergenic | 35.0% |
| ! | TAGTGCTATTGAGAAGCTAA+AGG | - | tig0017690:309561-309580 | Msa1362190:intron | 35.0% |
| TTAATTCAGAACATCACTGC+AGG | + | tig0017690:309641-309660 | None:intergenic | 35.0% | |
| ATTCAACAGATCGAATGTCT+AGG | - | tig0017690:309699-309718 | Msa1362190:CDS | 35.0% | |
| TTCAACAGATCGAATGTCTA+GGG | - | tig0017690:309700-309719 | Msa1362190:CDS | 35.0% | |
| ! | AAGCAAAGTATCCTACCTAA+AGG | - | tig0017690:309740-309759 | Msa1362190:CDS | 35.0% |
| AAACACAAGACACTACAGAA+AGG | + | tig0017690:309885-309904 | None:intergenic | 35.0% | |
| ATTGCTCATTTCGTTGAACA+AGG | + | tig0017690:309963-309982 | None:intergenic | 35.0% | |
| AAAGATAAATCTCCGCTTGA+AGG | + | tig0017690:310003-310022 | None:intergenic | 35.0% | |
| !!! | TTTACCTTTTGTTCTGGTTC+AGG | - | tig0017690:310020-310039 | Msa1362190:intron | 35.0% |
| ATCACACAATTGAAGATCCA+AGG | + | tig0017690:310109-310128 | None:intergenic | 35.0% | |
| CAGCTGCAAACACTATAAAA+TGG | - | tig0017690:310312-310331 | Msa1362190:intron | 35.0% | |
| GCTATGTTATGGAGAATTCT+TGG | - | tig0017690:310405-310424 | Msa1362190:CDS | 35.0% | |
| !! | TAGAAACTTTTTCCGATCTG+TGG | + | tig0017690:310431-310450 | None:intergenic | 35.0% |
| !! | ACAAAATCTGTTTTTCCTGC+TGG | - | tig0017690:310467-310486 | Msa1362190:intron | 35.0% |
| ACAGTATACAGACCTAGATA+AGG | + | tig0017690:310664-310683 | None:intergenic | 35.0% | |
| ! | CTACTTGAAAACTCTTTTGG+TGG | + | tig0017690:310778-310797 | None:intergenic | 35.0% |
| !!! | GTTTTCAAGTAGAGAAGTTC+TGG | - | tig0017690:310786-310805 | Msa1362190:intron | 35.0% |
| ! | TGGAATTTTGTGATAGACCT+CGG | - | tig0017690:310947-310966 | Msa1362190:intron | 35.0% |
| ACCTTAAGTATTCCAGAAAG+CGG | + | tig0017690:311093-311112 | None:intergenic | 35.0% | |
| !! | GAAAGTACTTGATGAATGGT+AGG | + | tig0017690:311194-311213 | None:intergenic | 35.0% |
| TGATATCACTTACTACAACG+GGG | + | tig0017690:311260-311279 | None:intergenic | 35.0% | |
| CGTTGTAGTAAGTGATATCA+TGG | - | tig0017690:311260-311279 | Msa1362190:intron | 35.0% | |
| TAGTAAGTGATATCATGGAC+TGG | - | tig0017690:311265-311284 | Msa1362190:intron | 35.0% | |
| GTGTTCTATCACAACTTTGA+TGG | - | tig0017690:311380-311399 | Msa1362190:intron | 35.0% | |
| GCGAAATTCAACAATGTTTC+TGG | - | tig0017690:311554-311573 | Msa1362190:five_prime_UTR | 35.0% | |
| CTTCCATGAGAATTAAGATG+AGG | + | tig0017690:311592-311611 | None:intergenic | 35.0% | |
| TTTGTCATTCTCAATTCCCA+AGG | + | tig0017690:311631-311650 | None:intergenic | 35.0% | |
| ! | GCTGATATCGTTAGTTCTTT+AGG | - | tig0017690:311654-311673 | Msa1362190:five_prime_UTR | 35.0% |
| ! | TGTTTGTTAGGAAAGCTAAC+TGG | - | tig0017690:311778-311797 | Msa1362190:five_prime_UTR | 35.0% |
| TACAACCATCATTACAGCAA+TGG | - | tig0017690:311808-311827 | Msa1362190:five_prime_UTR | 35.0% | |
| ACTTACCATTGCTGTAATGA+TGG | + | tig0017690:311816-311835 | None:intergenic | 35.0% | |
| TTACAGCAATGGTAAGTCTT+TGG | - | tig0017690:311819-311838 | Msa1362190:five_prime_UTR | 35.0% | |
| TTCAGATCCAAAATGTCATG+TGG | - | tig0017690:311921-311940 | Msa1362190:five_prime_UTR | 35.0% | |
| ! | GGAAATTGATAGTCTTGCTA+AGG | - | tig0017690:311942-311961 | Msa1362190:five_prime_UTR | 35.0% |
| ACGTATTCAGAATTCTCCAA+GGG | + | tig0017690:311985-312004 | None:intergenic | 35.0% | |
| AACGTATTCAGAATTCTCCA+AGG | + | tig0017690:311986-312005 | None:intergenic | 35.0% | |
| !! | AAGGACAATGATTTTGGCAG+AGG | + | tig0017690:307916-307935 | None:intergenic | 40.0% |
| TTGTTGCGAAAGTCGATAGA+TGG | - | tig0017690:308030-308049 | Msa1362190:intron | 40.0% | |
| GAAAGTCGATAGATGGAAGA+TGG | - | tig0017690:308037-308056 | Msa1362190:intron | 40.0% | |
| ! | GACATACATGATGATGATGC+AGG | - | tig0017690:308170-308189 | Msa1362190:intron | 40.0% |
| !! | TTTTTCTAGCATCCCGTTGT+TGG | + | tig0017690:308703-308722 | None:intergenic | 40.0% |
| GTTGGAGAAGGTAGAAAGTA+AGG | - | tig0017690:308860-308879 | Msa1362190:intron | 40.0% | |
| GGGAAGAACAACTTTCAATG+AGG | - | tig0017690:308881-308900 | Msa1362190:intron | 40.0% | |
| CAACTTTCAATGAGGTTAGG+TGG | - | tig0017690:308889-308908 | Msa1362190:intron | 40.0% | |
| TCTCTTGCTTCAGTTTCATG+TGG | - | tig0017690:308945-308964 | Msa1362190:intron | 40.0% | |
| GGGGACAAAACACTATTCAT+TGG | + | tig0017690:309310-309329 | None:intergenic | 40.0% | |
| TCTGAATGTTCTCATGGCAA+TGG | - | tig0017690:309489-309508 | Msa1362190:intron | 40.0% | |
| !!! | GTAACTTTTTTTCCCCCATG+TGG | - | tig0017690:309604-309623 | Msa1362190:intron | 40.0% |
| AGGTAAAGCTTAAGCCACAT+GGG | + | tig0017690:309621-309640 | None:intergenic | 40.0% | |
| TGCTGCACTTGATTACAAGA+AGG | - | tig0017690:309840-309859 | Msa1362190:intron | 40.0% | |
| AAGGAAGCGATATGTTAGTC+AGG | + | tig0017690:309866-309885 | None:intergenic | 40.0% | |
| AGATCAGGAAATCCTTCAAG+CGG | - | tig0017690:309988-310007 | Msa1362190:CDS | 40.0% | |
| TGTACCTGAACCAGAACAAA+AGG | + | tig0017690:310027-310046 | None:intergenic | 40.0% | |
| ! | GCATATGTTTTGTGGTGAGT+TGG | + | tig0017690:310150-310169 | None:intergenic | 40.0% |
| CTAGGAATTAACAAAGCAGC+TGG | + | tig0017690:310231-310250 | None:intergenic | 40.0% | |
| TCAAGTTCAACAGTTGCATG+AGG | + | tig0017690:310569-310588 | None:intergenic | 40.0% | |
| TGCAACTGTTGAACTTGAAG+TGG | - | tig0017690:310571-310590 | Msa1362190:intron | 40.0% | |
| CTACTATGTGCTCAAAGCAA+TGG | - | tig0017690:310927-310946 | Msa1362190:intron | 40.0% | |
| ATTGACACGCTTGAAACTGA+AGG | + | tig0017690:311051-311070 | None:intergenic | 40.0% | |
| CAGTTTCAAGCGTGTCAATT+AGG | - | tig0017690:311052-311071 | Msa1362190:intron | 40.0% | |
| TTAAGTATTCCAGAAAGCGG+AGG | + | tig0017690:311090-311109 | None:intergenic | 40.0% | |
| !! | TCCGCTTTCTGGAATACTTA+AGG | - | tig0017690:311089-311108 | Msa1362190:intron | 40.0% |
| ACTTGATGAATGGTAGGCAA+AGG | + | tig0017690:311188-311207 | None:intergenic | 40.0% | |
| GACTGGAGTCCAACAAAAAT+AGG | - | tig0017690:311282-311301 | Msa1362190:intron | 40.0% | |
| TGTTGAATTTCGCATGCTCA+AGG | + | tig0017690:311547-311566 | None:intergenic | 40.0% | |
| !!! | TACGTTTTAACTGCTGCAAC+TGG | - | tig0017690:312000-312019 | Msa1362190:five_prime_UTR | 40.0% |
| ! | GATGATGATGCAGGATCACA+AGG | - | tig0017690:308179-308198 | Msa1362190:intron | 45.0% |
| CGTCTTCTCCTTCTCTGAAT+TGG | - | tig0017690:308535-308554 | Msa1362190:intron | 45.0% | |
| AAAATCGATCCGCACCAACT+CGG | - | tig0017690:308645-308664 | Msa1362190:CDS | 45.0% | |
| AGAAAAAGAGGGGCCAACAA+CGG | - | tig0017690:308687-308706 | Msa1362190:CDS | 45.0% | |
| CTCCCCCAAATTAGCATGAA+AGG | - | tig0017690:308740-308759 | Msa1362190:CDS | 45.0% | |
| ! | TTGCTGGTTGTATGCAGTGT+TGG | - | tig0017690:308842-308861 | Msa1362190:intron | 45.0% |
| ! | GTTGTATGCAGTGTTGGAGA+AGG | - | tig0017690:308848-308867 | Msa1362190:intron | 45.0% |
| ATGAGAAAAACGTCCGTCGA+AGG | - | tig0017690:309455-309474 | Msa1362190:intron | 45.0% | |
| TGAGAAAAACGTCCGTCGAA+GGG | - | tig0017690:309456-309475 | Msa1362190:intron | 45.0% | |
| AGCTTCTCAATAGCACTAGG+AGG | + | tig0017690:309559-309578 | None:intergenic | 45.0% | |
| GTAAAGCTTAAGCCACATGG+GGG | + | tig0017690:309619-309638 | None:intergenic | 45.0% | |
| GGTAAAGCTTAAGCCACATG+GGG | + | tig0017690:309620-309639 | None:intergenic | 45.0% | |
| CAGGTAAAGCTTAAGCCACA+TGG | + | tig0017690:309622-309641 | None:intergenic | 45.0% | |
| ATCCTACCTAAAGGAGCTTG+AGG | - | tig0017690:309749-309768 | Msa1362190:CDS | 45.0% | |
| TTCCTCAAGCTCCTTTAGGT+AGG | + | tig0017690:309754-309773 | None:intergenic | 45.0% | |
| CTTGTTCCTCAAGCTCCTTT+AGG | + | tig0017690:309758-309777 | None:intergenic | 45.0% | |
| GTAATCAAGTGCAGCAAACC+AGG | + | tig0017690:309836-309855 | None:intergenic | 45.0% | |
| CAAACGAATGTCCACAGAAG+AGG | + | tig0017690:310267-310286 | None:intergenic | 45.0% | |
| GAGAATTCTTGGCCACAGAT+CGG | - | tig0017690:310416-310435 | Msa1362190:CDS | 45.0% | |
| TCCTGCTGGATGCTTTAATG+TGG | - | tig0017690:310481-310500 | Msa1362190:intron | 45.0% | |
| ! | ACCACATTAAAGCATCCAGC+AGG | + | tig0017690:310485-310504 | None:intergenic | 45.0% |
| !! | GTCTCTGCTTGGCCTTAAAT+AGG | + | tig0017690:310756-310775 | None:intergenic | 45.0% |
| !! | TCAAGTAGAGAAGTTCTGGG+AGG | - | tig0017690:310790-310809 | Msa1362190:intron | 45.0% |
| ! | TGATGCTTTTGTCCCTGTGT+TGG | - | tig0017690:310827-310846 | Msa1362190:CDS | 45.0% |
| ! | GATGCTTTTGTCCCTGTGTT+GGG | - | tig0017690:310828-310847 | Msa1362190:CDS | 45.0% |
| CAGTTACATCTCCCAACACA+GGG | + | tig0017690:310842-310861 | None:intergenic | 45.0% | |
| ACAGTTACATCTCCCAACAC+AGG | + | tig0017690:310843-310862 | None:intergenic | 45.0% | |
| !! | AGAGTACTGCAGAGAGAGAA+GGG | + | tig0017690:310889-310908 | None:intergenic | 45.0% |
| !! | AAGAGTACTGCAGAGAGAGA+AGG | + | tig0017690:310890-310909 | None:intergenic | 45.0% |
| AGTGTAGCAATATCTCTCCG+AGG | + | tig0017690:310967-310986 | None:intergenic | 45.0% | |
| GCTACACTCAATGTTACGGA+AGG | - | tig0017690:310979-310998 | Msa1362190:intron | 45.0% | |
| ACACTCAATGTTACGGAAGG+AGG | - | tig0017690:310982-311001 | Msa1362190:intron | 45.0% | |
| CACTCAATGTTACGGAAGGA+GGG | - | tig0017690:310983-311002 | Msa1362190:intron | 45.0% | |
| ACTCAATGTTACGGAAGGAG+GGG | - | tig0017690:310984-311003 | Msa1362190:intron | 45.0% | |
| TGACGGTGATACTTTGTCAG+GGG | + | tig0017690:311874-311893 | None:intergenic | 45.0% | |
| GTGACGGTGATACTTTGTCA+GGG | + | tig0017690:311875-311894 | None:intergenic | 45.0% | |
| GAATGACACACAGTTTCCCT+TGG | - | tig0017690:311966-311985 | Msa1362190:five_prime_UTR | 45.0% | |
| !!! | GCAGTTTTGGTTTCGAGCGA+AGG | + | tig0017690:307969-307988 | None:intergenic | 50.0% |
| ! | GTAGATGAAAGCAGGAGTGC+TGG | - | tig0017690:308083-308102 | Msa1362190:intron | 50.0% |
| !!! | GTGCTGGTTTTCCATCTAGC+CGG | - | tig0017690:308099-308118 | Msa1362190:intron | 50.0% |
| GAAGGAGAAGACGAAGACGA+AGG | + | tig0017690:308528-308547 | None:intergenic | 50.0% | |
| CTACTGTGTAGACACCGAGT+TGG | + | tig0017690:308662-308681 | None:intergenic | 50.0% | |
| GAAAAAGAGGGGCCAACAAC+GGG | - | tig0017690:308688-308707 | Msa1362190:CDS | 50.0% | |
| CTAGGTGGCAGATGAACTTG+TGG | - | tig0017690:309270-309289 | Msa1362190:intron | 50.0% | |
| GAACATCATAGGCCCTTCGA+CGG | + | tig0017690:309471-309490 | None:intergenic | 50.0% | |
| !! | CTCTTTTGGTGGTCTCTGCT+TGG | + | tig0017690:310767-310786 | None:intergenic | 50.0% |
| !!! | GAAGTTCTGGGAGGCAGTTT+TGG | - | tig0017690:310799-310818 | Msa1362190:intron | 50.0% |
| AATGTTACGGAAGGAGGGGA+AGG | - | tig0017690:310988-311007 | Msa1362190:intron | 50.0% | |
| GACACGCTTGAAACTGAAGG+AGG | + | tig0017690:311048-311067 | None:intergenic | 50.0% | |
| AAGCGTGTCAATTAGGCCTC+AGG | - | tig0017690:311059-311078 | Msa1362190:intron | 50.0% | |
| ! | GGTGACGGTGATACTTTGTC+AGG | + | tig0017690:311876-311895 | None:intergenic | 50.0% |
| !! | GTGTAGACACCGAGTTGGTG+CGG | + | tig0017690:308657-308676 | None:intergenic | 55.0% |
| AAGTGCAGCAAACCAGGTCC+AGG | + | tig0017690:309830-309849 | None:intergenic | 55.0% | |
| !!! | GTTCTGGGAGGCAGTTTTGG+TGG | - | tig0017690:310802-310821 | Msa1362190:intron | 55.0% |
| !! | GGGGAAGGTTCTAGCTTGTC+AGG | - | tig0017690:311003-311022 | Msa1362190:intron | 55.0% |
| GTCAGGCTTGCATCAGTTGC+AGG | - | tig0017690:311020-311039 | Msa1362190:intron | 55.0% | |
| GGAAGATGGGAACGCGACTG+CGG | - | tig0017690:308051-308070 | Msa1362190:intron | 60.0% | |
| GGGGATGATGTCCTCAGTCC+TGG | - | tig0017690:309809-309828 | Msa1362190:intron | 60.0% | |
| GATGTCCTCAGTCCTGGACC+TGG | - | tig0017690:309815-309834 | Msa1362190:intron | 60.0% | |
| GCAAACCAGGTCCAGGACTG+AGG | + | tig0017690:309823-309842 | None:intergenic | 60.0% | |
| GAAAGCGGAGGTGATGCCTG+AGG | + | tig0017690:311078-311097 | None:intergenic | 60.0% | |
| CAGGCATCACCTCCGCTTTC+TGG | - | tig0017690:311078-311097 | Msa1362190:intron | 60.0% | |
| !! | GTCGGCTCGCTCCGGCTAGA+TGG | + | tig0017690:308113-308132 | None:intergenic | 70.0% |
| !! | TCTGCGTCGTCGGCTCGCTC+CGG | + | tig0017690:308121-308140 | None:intergenic | 70.0% |
| GCAGCGGCTGTCTGCGTCGT+CGG | + | tig0017690:308131-308150 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017690 | gene | 307699 | 312023 | 307699 | ID=Msa1362190;Name=Msa1362190 |
| tig0017690 | mRNA | 307699 | 312023 | 307699 | ID=Msa1362190-mRNA-1;Parent=Msa1362190;Name=Msa1362190-mRNA-1;_AED=0.09;_eAED=0.09;_QI=478|1|0.9|1|0.88|1|10|0|292 |
| tig0017690 | exon | 307699 | 307796 | 307699 | ID=Msa1362190-mRNA-1:exon:12860;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 307893 | 307929 | 307893 | ID=Msa1362190-mRNA-1:exon:12859;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 308612 | 308819 | 308612 | ID=Msa1362190-mRNA-1:exon:12858;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 309077 | 309162 | 309077 | ID=Msa1362190-mRNA-1:exon:12857;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 309681 | 309779 | 309681 | ID=Msa1362190-mRNA-1:exon:12856;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 309946 | 310014 | 309946 | ID=Msa1362190-mRNA-1:exon:12855;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 310140 | 310277 | 310140 | ID=Msa1362190-mRNA-1:exon:12854;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 310386 | 310448 | 310386 | ID=Msa1362190-mRNA-1:exon:12853;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 310820 | 310863 | 310820 | ID=Msa1362190-mRNA-1:exon:12852;Parent=Msa1362190-mRNA-1 |
| tig0017690 | exon | 311512 | 312023 | 311512 | ID=Msa1362190-mRNA-1:exon:12851;Parent=Msa1362190-mRNA-1 |
| tig0017690 | five_prime_UTR | 311546 | 312023 | 311546 | ID=Msa1362190-mRNA-1:five_prime_utr;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 311512 | 311545 | 311512 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 310820 | 310863 | 310820 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 310386 | 310448 | 310386 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 310140 | 310277 | 310140 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 309946 | 310014 | 309946 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 309681 | 309779 | 309681 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 309077 | 309162 | 309077 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 308612 | 308819 | 308612 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 307893 | 307929 | 307893 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| tig0017690 | CDS | 307699 | 307796 | 307699 | ID=Msa1362190-mRNA-1:cds;Parent=Msa1362190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
