AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167320 MtrunA17_Chr7g0265781 97.374 1028 25 1 1 1026 1 1028 0.0 2055
Msa1167320 MtrunA17_Chr1g0179281 54.900 1051 417 21 3 1026 1 1021 0.0 1025
Msa1167320 MtrunA17_Chr6g0452881 37.534 365 175 10 78 402 37 388 8.89e-58 214
Msa1167320 MtrunA17_Chr6g0452881 36.207 174 105 4 847 1016 645 816 2.16e-30 129
Msa1167320 MtrunA17_Chr4g0037071 33.908 174 109 4 847 1016 15 186 2.41e-26 108
Msa1167320 MtrunA17_Chr6g0452891 34.118 170 79 7 853 1013 72 217 4.11e-22 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167320 AT2G36480.2 50.000 458 187 12 3 428 1 448 1.07e-119 390
Msa1167320 AT2G36480.2 40.574 244 134 4 774 1017 716 948 8.35e-47 182
Msa1167320 AT2G36480.1 50.000 458 187 12 3 428 1 448 1.07e-119 390
Msa1167320 AT2G36480.1 40.574 244 134 4 774 1017 716 948 8.35e-47 182
Msa1167320 AT4G04885.1 37.500 400 185 13 21 399 9 364 5.86e-57 212
Msa1167320 AT4G04885.1 38.012 171 90 5 850 1011 625 788 7.01e-32 134
Msa1167320 AT1G66500.1 32.558 172 96 6 850 1012 227 387 4.51e-22 100
Msa1167320 AT5G43620.1 32.386 176 92 6 850 1012 220 381 1.00e-21 99.8

Find 324 sgRNAs with CRISPR-Local

Find 566 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTGCCTTTCTAAATATT+TGG 0.133248 7_4:+59753763 None:intergenic
ACTTCTCGTAATTGATTTAT+TGG 0.142148 7_4:+59750867 None:intergenic
TTGCTGCTGTCCCGTAATTT+TGG 0.160595 7_4:+59751335 None:intergenic
GACAGTATTGTTAAGAATAT+TGG 0.166316 7_4:-59754355 Msa1167320:CDS
AGCTGCTGTTGCTGAGGTTT+TGG 0.194493 7_4:+59751030 None:intergenic
TGTCAAATCTACACATTCTT+TGG 0.195787 7_4:-59749254 Msa1167320:three_prime_UTR
TGGATTCAAGGTATTCTTAT+TGG 0.211269 7_4:+59750606 None:intergenic
CTAATTCTAACACTAAAATT+TGG 0.212454 7_4:+59755783 None:intergenic
CCCTCCTTCGATGCGTAATT+TGG 0.215915 7_4:-59751226 Msa1167320:CDS
ACCTGGCTTCATATTCAATT+TGG 0.235053 7_4:+59751467 None:intergenic
TTTATGCAGCTGATAAATTA+AGG 0.237610 7_4:+59749176 None:intergenic
ACATGTAATCGAAGAATTAT+TGG 0.248282 7_4:-59750281 Msa1167320:CDS
TTCTAGTGTTTCAAATAGTT+TGG 0.249454 7_4:-59752785 Msa1167320:CDS
GAGCTTAAAAGATTTGAAAT+TGG 0.266321 7_4:+59750586 None:intergenic
TCTTAAAACATCTCAACATT+TGG 0.272228 7_4:-59751181 Msa1167320:CDS
TTATTAACCTTTGTTCCAAT+TGG 0.272469 7_4:+59751576 None:intergenic
CCCGACCACATTAATTTCTT+CGG 0.274359 7_4:-59750782 Msa1167320:CDS
CTACTTTCCATCTCGCTATC+TGG 0.283979 7_4:+59749893 None:intergenic
AGTAACTGTCCATCTCAAAT+AGG 0.286697 7_4:-59750835 Msa1167320:CDS
CGTTGCCTTTCTAAATATTT+GGG 0.287620 7_4:+59753764 None:intergenic
CCGACCACATTAATTTCTTC+GGG 0.290620 7_4:-59750781 Msa1167320:CDS
TGCCATTCGTTCCAATGTTC+AGG 0.291207 7_4:-59751121 Msa1167320:CDS
ATCAATATGAATTGGGGATT+AGG 0.292412 7_4:-59755957 Msa1167320:five_prime_UTR
TCAATATGAATTGGGGATTA+GGG 0.294331 7_4:-59755956 Msa1167320:five_prime_UTR
GCCTTCCCTTGCGGTAGTTT+TGG 0.294785 7_4:+59750709 None:intergenic
AGCACCGAAGTCTGTGAATT+TGG 0.302197 7_4:-59752656 Msa1167320:CDS
ATAGTCAAATTAGTAATTAT+CGG 0.306134 7_4:+59755443 None:intergenic
ATTCATTCATCAATATGAAT+TGG 0.311937 7_4:-59755965 Msa1167320:five_prime_UTR
ACAGTATTGTTAAGAATATT+GGG 0.313571 7_4:-59754354 Msa1167320:CDS
GGAGGGTTGCGTATTGTTAC+TGG 0.318530 7_4:+59751243 None:intergenic
GGGTACCCTTGATAAGCTTC+TGG 0.325665 7_4:+59749636 None:intergenic
TTCATTCATCAATATGAATT+GGG 0.326097 7_4:-59755964 Msa1167320:five_prime_UTR
GAGACTGAGAATCACTTCTA+AGG 0.328918 7_4:+59753816 None:intergenic
TTCCAATTGGGTGTGTGATT+TGG 0.329546 7_4:+59751589 None:intergenic
ATTGCGGTGATTGTGGTATT+AGG 0.330585 7_4:-59750243 Msa1167320:CDS
CTTCTCGTAATTGATTTATT+GGG 0.331979 7_4:+59750868 None:intergenic
TGCGATGGGCGATTACTATT+GGG 0.334473 7_4:+59756082 None:intergenic
AATAGGAATGTCCAAAATTA+CGG 0.342563 7_4:-59751346 Msa1167320:CDS
GTCAAATCTACACATTCTTT+GGG 0.350866 7_4:-59749253 Msa1167320:three_prime_UTR
TATTAACCTTTGTTCCAATT+GGG 0.351939 7_4:+59751577 None:intergenic
TAAAGGAGTATTTGATGATA+TGG 0.354621 7_4:-59753072 Msa1167320:CDS
GATGGCCGATGAAGACAATT+TGG 0.356986 7_4:-59752494 Msa1167320:intron
ACCATTTCTTTGCCCGGATA+AGG 0.361597 7_4:+59752711 None:intergenic
CTTGATGCGGCGGTGGTTGA+GGG 0.366523 7_4:+59755519 None:intergenic
AAGATTTGAAATTGGATTCA+AGG 0.366649 7_4:+59750594 None:intergenic
GTTTCAAATAGTTTGGGTTC+AGG 0.366649 7_4:-59752778 Msa1167320:CDS
ATATTTGTTTCTGCTCCTAA+TGG 0.366883 7_4:-59751435 Msa1167320:CDS
GATAAAGCGAAGGCAGCTTT+TGG 0.368771 7_4:+59754383 None:intergenic
GAATGCTTGGGTAAGCCATT+AGG 0.372033 7_4:+59751420 None:intergenic
ACTAATTTGACTATAATTGC+TGG 0.373637 7_4:-59755434 Msa1167320:CDS
GGTGTTGCAGAGACCTTATC+CGG 0.374381 7_4:-59752724 Msa1167320:CDS
TGAGGAAACGTTCGTGAAGT+TGG 0.376740 7_4:+59755644 None:intergenic
AGCCGAAGAATTTGAATGCT+TGG 0.380657 7_4:+59751407 None:intergenic
CTTAAAACATCTCAACATTT+GGG 0.380724 7_4:-59751180 Msa1167320:CDS
ATTGGAACAAAGGTTAATAA+AGG 0.381415 7_4:-59751573 Msa1167320:CDS
GGGTGCTGCACGTCCATGGC+TGG 0.382360 7_4:-59752997 Msa1167320:CDS
TCTTGATGCGGCGGTGGTTG+AGG 0.387175 7_4:+59755518 None:intergenic
TCTAGTGTTTCAAATAGTTT+GGG 0.389260 7_4:-59752784 Msa1167320:CDS
CAAAATTTGTTTGACTGCTT+AGG 0.389354 7_4:+59749547 None:intergenic
AGCATCATCTGCCTCAATTC+TGG 0.390784 7_4:+59750402 None:intergenic
AGCTGATGCACCGCGATTGT+TGG 0.393455 7_4:+59750645 None:intergenic
ACCCAAGCATTCAAATTCTT+CGG 0.397635 7_4:-59751409 Msa1167320:CDS
TGACAGCAATGCTTTCAGTT+TGG 0.399143 7_4:+59750482 None:intergenic
GCATAATATTATCCGCCGTT+TGG 0.399325 7_4:+59749328 None:intergenic
AAGAAACAACTACCATCATC+TGG 0.401863 7_4:-59751537 Msa1167320:CDS
TCTGCGGCGAAATCGATTGC+TGG 0.405177 7_4:-59755401 Msa1167320:CDS
GTCACTTTGGCTTTGACTAA+AGG 0.406869 7_4:+59750949 None:intergenic
GAGAGGCCAGATCGAGCTTT+GGG 0.416284 7_4:-59753017 Msa1167320:CDS
TCTATGCCGCATACAACAAT+AGG 0.416550 7_4:-59751363 Msa1167320:CDS
ATTCATATTGATGAATGAAT+GGG 0.418307 7_4:+59755968 None:intergenic
AAAACCTCAGCAACAGCAGC+TGG 0.418357 7_4:-59751028 Msa1167320:CDS
ACTGGGACAGCTGAAGAAAC+AGG 0.419209 7_4:+59750433 None:intergenic
AGAGAGGCCAGATCGAGCTT+TGG 0.423688 7_4:-59753018 Msa1167320:CDS
ACAAAAGAAAGAGAACAAAA+TGG 0.424354 7_4:-59750175 Msa1167320:CDS
AATTCATATTGATGAATGAA+TGG 0.425384 7_4:+59755967 None:intergenic
TTTGACACCTATGGGGATAC+CGG 0.426646 7_4:-59749385 Msa1167320:three_prime_UTR
TAAATCAATTACGAGAAGTC+TGG 0.426887 7_4:-59750863 Msa1167320:CDS
CAATTGGGTGTGTGATTTGG+AGG 0.427496 7_4:+59751592 None:intergenic
TAAAACAGACGGGAGTCAAT+TGG 0.428390 7_4:-59750038 Msa1167320:CDS
ATTCATAACTTGTATTGCAT+TGG 0.428430 7_4:-59749672 Msa1167320:three_prime_UTR
CCGAAGAAATTAATGTGGTC+GGG 0.430521 7_4:+59750782 None:intergenic
ACCTTATCCGGGCAAAGAAA+TGG 0.430710 7_4:-59752712 Msa1167320:CDS
TCTCGCTATCTGGATTGTTC+AGG 0.430835 7_4:+59749903 None:intergenic
CTCCAAATCACACACCCAAT+TGG 0.432800 7_4:-59751591 Msa1167320:CDS
TGCATTTCTCGAATGACATC+AGG 0.434562 7_4:+59750307 None:intergenic
GCCGAAGAATTTGAATGCTT+GGG 0.436198 7_4:+59751408 None:intergenic
TTCATATTCAATTTGGCACT+TGG 0.438918 7_4:+59751474 None:intergenic
GGGTTTAAGCCTACTCGGTC+AGG 0.439200 7_4:-59750814 Msa1167320:CDS
GTAACTGTCCATCTCAAATA+GGG 0.440250 7_4:-59750834 Msa1167320:CDS
CGATTGTTGGAGGAAGTAGA+TGG 0.441441 7_4:+59750658 None:intergenic
CGTTGCATACTAAAACTAGA+TGG 0.443364 7_4:-59749606 Msa1167320:three_prime_UTR
ACATCAGATGACTGGATTGC+TGG 0.443441 7_4:-59750121 Msa1167320:CDS
TTTAGTATGCAACGAGAACC+TGG 0.444406 7_4:+59749615 None:intergenic
GGTTCAGGTGTTGGAAGAAC+CGG 0.446940 7_4:-59752763 Msa1167320:CDS
AAGAGCATCGGCGGAGCCTA+TGG 0.447109 7_4:-59752823 Msa1167320:CDS
GCAGTGCAATGTCAAAGAAC+TGG 0.449666 7_4:-59752615 Msa1167320:CDS
CAACGACAACAACCTACCTC+TGG 0.451366 7_4:-59755623 Msa1167320:CDS
CACGTCCATGGCTGGATCCT+AGG 0.451919 7_4:-59752989 Msa1167320:CDS
CTTTGGGTGCTGCACGTCCA+TGG 0.452816 7_4:-59753001 Msa1167320:CDS
GCAGCACCCAAAGCTCGATC+TGG 0.453817 7_4:+59753011 None:intergenic
AGAGTAGGTGAATAATCATT+TGG 0.453893 7_4:+59750733 None:intergenic
GTAGCATAGCGCACAACATT+TGG 0.454690 7_4:+59749111 None:intergenic
CTCAAGTTGTTAGAGACATT+AGG 0.457050 7_4:+59752529 None:intergenic
AATCATTTCACCTACCCTGC+TGG 0.462666 7_4:+59753730 None:intergenic
TCGATTGCTGGTGCTGTTTG+TGG 0.463089 7_4:-59755389 Msa1167320:CDS
AACGTCTTCAGCAGTCCAGC+AGG 0.469296 7_4:-59753745 Msa1167320:CDS
ACCAGCTCTTGATGCGGCGG+TGG 0.470882 7_4:+59755512 None:intergenic
AGAGGAGTTCATGTGGGATG+AGG 0.471007 7_4:-59752578 Msa1167320:CDS
CTTGTATTGCATTGGAGCCA+AGG 0.471717 7_4:-59749664 Msa1167320:three_prime_UTR
AACTTCAATCCCGCGGTCAA+TGG 0.473692 7_4:-59753860 Msa1167320:CDS
ACAGAAATTAGAAATCTCAT+TGG 0.476065 7_4:-59750343 Msa1167320:CDS
ATAAGCTTCTGGCTTAACCT+TGG 0.478038 7_4:+59749647 None:intergenic
GAGTAGAAGAAAGGCTGCGA+TGG 0.479165 7_4:+59756067 None:intergenic
CTCCTGTCCATTCAAGTATG+AGG 0.480383 7_4:-59753949 Msa1167320:CDS
ATCACAAGAGAAGGATATGC+GGG 0.481020 7_4:-59751082 Msa1167320:CDS
AATAGTTTGGGTTCAGGTGT+TGG 0.482447 7_4:-59752772 Msa1167320:CDS
AAACTACCGCAAGGGAAGGC+TGG 0.484966 7_4:-59750706 Msa1167320:CDS
TTGTCTTCATCGGCCATCCA+TGG 0.488246 7_4:+59752499 None:intergenic
ACAAAAGAAAATCAAAGGAG+TGG 0.488685 7_4:+59749274 None:intergenic
CTACGATGTTGTCGTCTGGT+AGG 0.491431 7_4:-59755595 Msa1167320:CDS
CACAACATTTGGTCAAATGT+TGG 0.491776 7_4:+59749122 None:intergenic
GAGAGGTGAAAGAGAAAAGA+GGG 0.493399 7_4:+59756037 None:intergenic
TGAATCCCAAATATTTAGAA+AGG 0.497212 7_4:-59753769 Msa1167320:CDS
GGGGCGGATTTGACACCTAT+GGG 0.497261 7_4:-59749393 Msa1167320:three_prime_UTR
GAAACAGGAACTGAAGCAAC+TGG 0.498254 7_4:+59750448 None:intergenic
AAACGTTCGTGAAGTTGGAT+TGG 0.499805 7_4:+59755649 None:intergenic
AAGGGACGAGTGGATGTTCA+AGG 0.500865 7_4:-59749936 Msa1167320:CDS
AGATGACTGGATTGCTGGCA+AGG 0.501201 7_4:-59750116 Msa1167320:CDS
AAAGATGCCTCATACTTGAA+TGG 0.503245 7_4:+59753942 None:intergenic
ACAGCAGCTGGGTTCTTCAC+AGG 0.503314 7_4:-59751016 Msa1167320:CDS
ATAGGAATGTCCAAAATTAC+GGG 0.506569 7_4:-59751345 Msa1167320:CDS
CGTATTGTTACTGGCACTGT+TGG 0.506761 7_4:+59751252 None:intergenic
CGGGAGTCAATTGGACACTA+TGG 0.507853 7_4:-59750029 Msa1167320:CDS
GCTGAAACCATTTCTTTGCC+CGG 0.508129 7_4:+59752705 None:intergenic
AAAGAAGTTGCTAAAGATAA+CGG 0.508160 7_4:+59751057 None:intergenic
AACTGAAGCAACTGGTAAAG+AGG 0.508176 7_4:+59750456 None:intergenic
CTAAATATTTGGGATTCACA+TGG 0.508383 7_4:+59753774 None:intergenic
TTGACACCTATGGGGATACC+GGG 0.510015 7_4:-59749384 Msa1167320:three_prime_UTR
GTTAAGCCAGAAGCTTATCA+AGG 0.511104 7_4:-59749642 Msa1167320:three_prime_UTR
AATCGAGGTTTCTTCGCACC+TGG 0.512088 7_4:+59755695 None:intergenic
TGGGGCGGATTTGACACCTA+TGG 0.512543 7_4:-59749394 Msa1167320:three_prime_UTR
GCCAAATTGAATATGAAGCC+AGG 0.515735 7_4:-59751468 Msa1167320:CDS
TCATATTCAATTTGGCACTT+GGG 0.516765 7_4:+59751475 None:intergenic
GGCTTAAACCCTATTTGAGA+TGG 0.516828 7_4:+59750826 None:intergenic
ACCGCCAATGAGCCTACTTC+CGG 0.517406 7_4:+59752744 None:intergenic
ATCATGGGAGTTGCAGAAGC+AGG 0.518761 7_4:-59751499 Msa1167320:CDS
CAAGTTACCAACCTGAACAT+TGG 0.518895 7_4:+59751110 None:intergenic
ATTTGAAGATGTATACTGTC+AGG 0.519071 7_4:-59749960 Msa1167320:CDS
AGTAAAATCTTCCAGAATTG+AGG 0.520874 7_4:-59750413 Msa1167320:CDS
GACACCTATGGGGATACCGG+GGG 0.520940 7_4:-59749382 Msa1167320:three_prime_UTR
GGAGTATTTGATGATATGGC+TGG 0.521125 7_4:-59753068 Msa1167320:CDS
TGACACCTATGGGGATACCG+GGG 0.521916 7_4:-59749383 Msa1167320:three_prime_UTR
CAAAAGAAAATCAAAGGAGT+GGG 0.522899 7_4:+59749275 None:intergenic
GATCGCATCACCGTCTCACT+TGG 0.525025 7_4:+59750511 None:intergenic
TGATGCACCGCGATTGTTGG+AGG 0.525881 7_4:+59750648 None:intergenic
GAAATTAATGTGGTCGGGGA+AGG 0.526098 7_4:+59750787 None:intergenic
CCACATCATTGCGGTGATTG+TGG 0.527976 7_4:-59750250 Msa1167320:CDS
AGAACCGGAAGTAGGCTCAT+TGG 0.529221 7_4:-59752748 Msa1167320:CDS
CACACAATACACACAAGCAT+TGG 0.529437 7_4:+59749990 None:intergenic
AACGACAACAACCTACCTCT+GGG 0.529457 7_4:-59755622 Msa1167320:CDS
GCCAAATTACGCATCGAAGG+AGG 0.530494 7_4:+59751225 None:intergenic
ATTGGAACGAATGGCAGGCA+CGG 0.530926 7_4:+59751128 None:intergenic
CCCGAAGAAATTAATGTGGT+CGG 0.531341 7_4:+59750781 None:intergenic
CCACTCTTCACAGATGGAGC+TGG 0.531578 7_4:+59750898 None:intergenic
GCTTACCAAATTGTCTTCAT+CGG 0.532183 7_4:+59752489 None:intergenic
ATTCAAGGTATTCTTATTGG+CGG 0.532457 7_4:+59750609 None:intergenic
ATTTGGATGCACATAGCATA+AGG 0.533715 7_4:-59752639 Msa1167320:CDS
ACTGCTTAGGAAAGCAGCTA+AGG 0.533771 7_4:+59749560 None:intergenic
TTATTGGCGGTATTTGAGCT+CGG 0.534346 7_4:+59750622 None:intergenic
GCGAAAGGTTTGATATCCGC+AGG 0.535645 7_4:-59750556 Msa1167320:CDS
CAAGCATCTAGCATGAATGA+TGG 0.535680 7_4:+59749859 None:intergenic
GGTATGCAACATCAGATGAC+TGG 0.539121 7_4:-59750129 Msa1167320:CDS
ACCACCGCCGCATCAAGAGC+TGG 0.540585 7_4:-59755513 Msa1167320:CDS
ACAGCAGCAATTTGATTCTG+AGG 0.540664 7_4:-59751322 Msa1167320:CDS
GGAGAGGTGAAAGAGAAAAG+AGG 0.541777 7_4:+59756036 None:intergenic
AGAAACAACTACCATCATCT+GGG 0.543785 7_4:-59751536 Msa1167320:CDS
TCATTCATCAATATGAATTG+GGG 0.544901 7_4:-59755963 Msa1167320:five_prime_UTR
TTAAGCTCGTTAGTTGCGAA+AGG 0.545105 7_4:-59750571 Msa1167320:CDS
TTCACATGGATGCTATGAGA+TGG 0.547527 7_4:+59753788 None:intergenic
AATAATTCTTCGATTACATG+TGG 0.547916 7_4:+59750283 None:intergenic
TGTCTTCATCGGCCATCCAT+GGG 0.548954 7_4:+59752500 None:intergenic
GGATCGAGAGAGTAGAAGAA+AGG 0.551115 7_4:+59756058 None:intergenic
ATTATATCCATCGTCTCCAT+AGG 0.554348 7_4:+59752807 None:intergenic
CAAGGTCATCTTCATCCAAA+CGG 0.554505 7_4:-59749343 Msa1167320:three_prime_UTR
TGAACATTGGAACGAATGGC+AGG 0.555403 7_4:+59751123 None:intergenic
AATAATCAGCATACTCATAG+AGG 0.555522 7_4:-59752871 Msa1167320:CDS
AGATGTATACTGTCAGGAAA+GGG 0.555729 7_4:-59749954 Msa1167320:CDS
AGTAGAAGAAAGGCTGCGAT+GGG 0.555771 7_4:+59756068 None:intergenic
GACATTCCTATTGTTGTATG+CGG 0.557470 7_4:+59751357 None:intergenic
AAGGTGAAGACTGTTCTGAA+GGG 0.558749 7_4:+59751289 None:intergenic
AACCTGAACATTGGAACGAA+TGG 0.559123 7_4:+59751119 None:intergenic
AAAGGTGAAGACTGTTCTGA+AGG 0.560794 7_4:+59751288 None:intergenic
CAGCAGCAATTTGATTCTGA+GGG 0.562116 7_4:-59751321 Msa1167320:CDS
TATGATGATAATAAAACAGA+CGG 0.562220 7_4:-59750049 Msa1167320:CDS
CCAAATTACGCATCGAAGGA+GGG 0.563230 7_4:+59751226 None:intergenic
ATGATTCCACTCTTCACAGA+TGG 0.563534 7_4:+59750892 None:intergenic
TTGGAACGAATGGCAGGCAC+GGG 0.563880 7_4:+59751129 None:intergenic
TGATTGTAGCATCAAGAAGA+TGG 0.565765 7_4:-59750150 Msa1167320:CDS
TGCCTCATACTTGAATGGAC+AGG 0.566930 7_4:+59753947 None:intergenic
TCCGCTTATTGATTCTTGTG+CGG 0.567413 7_4:+59755848 None:intergenic
GTTGCTACGATGTTGTCGTC+TGG 0.567550 7_4:-59755599 Msa1167320:CDS
CACACACCCAATTGGAACAA+AGG 0.567583 7_4:-59751583 Msa1167320:CDS
TATTGTTAAGAATATTGGGC+GGG 0.568077 7_4:-59754350 Msa1167320:CDS
CCACAATCACCGCAATGATG+TGG 0.571121 7_4:+59750250 None:intergenic
CGAAGAAATTAATGTGGTCG+GGG 0.572323 7_4:+59750783 None:intergenic
ATTCGTTCCAATGTTCAGGT+TGG 0.573224 7_4:-59751117 Msa1167320:CDS
GTCACCAGCTCTTGATGCGG+CGG 0.573740 7_4:+59755509 None:intergenic
CGAGATGGAAAGTAGAAATG+TGG 0.573826 7_4:-59749885 Msa1167320:CDS
GCATCCAAATTCACAGACTT+CGG 0.574943 7_4:+59752652 None:intergenic
TTGTCAGATAACTCAATACT+TGG 0.575179 7_4:-59749839 Msa1167320:CDS
TGAGGCAGATGATGCTGCAA+AGG 0.575199 7_4:-59750395 Msa1167320:CDS
AGACTGAGAATCACTTCTAA+GGG 0.576385 7_4:+59753817 None:intergenic
TCACATGGATGCTATGAGAT+GGG 0.576495 7_4:+59753789 None:intergenic
CTTGCGAAAATCACAAGAGA+AGG 0.578295 7_4:-59751091 Msa1167320:CDS
CACAATCACCGCAATGATGT+GGG 0.578357 7_4:+59750251 None:intergenic
AAAGGAGCTTTAGATTTGAG+TGG 0.579334 7_4:+59750967 None:intergenic
ACCGGAAGTAGGCTCATTGG+CGG 0.579906 7_4:-59752745 Msa1167320:CDS
GAAAGTAGTGATGGTGGCGG+TGG 0.581623 7_4:-59755548 Msa1167320:CDS
AAGCATCTAGCATGAATGAT+GGG 0.581668 7_4:+59749860 None:intergenic
AAGATGTATACTGTCAGGAA+AGG 0.582076 7_4:-59749955 Msa1167320:CDS
GAACCCAGCTGCTGTTGCTG+AGG 0.583698 7_4:+59751024 None:intergenic
GAAGGCTGGAAAGAAGCAAA+AGG 0.584037 7_4:-59750692 Msa1167320:CDS
GGAGAACCTAGTGACGCGGC+GGG 0.584551 7_4:+59750754 None:intergenic
TGGTAGTTGTTTCTTAACAG+TGG 0.585131 7_4:+59751545 None:intergenic
GAGATGGAAAGTAGAAATGT+GGG 0.585552 7_4:-59749884 Msa1167320:CDS
TGTTTGTGGTAACATTCTTG+AGG 0.586608 7_4:-59755375 Msa1167320:intron
GCGATGGGCGATTACTATTG+GGG 0.587332 7_4:+59756083 None:intergenic
ATGTGGGATGAGGTGAACCC+TGG 0.587853 7_4:-59752568 Msa1167320:CDS
AGAACAGTTTAATAGACACT+TGG 0.587882 7_4:-59750209 Msa1167320:CDS
GGCGGAGCCTATGGAGACGA+TGG 0.591159 7_4:-59752814 Msa1167320:CDS
ATTTGACAAAAGAAAATCAA+AGG 0.591890 7_4:+59749269 None:intergenic
GGGACGAGTGGATGTTCAAG+GGG 0.591895 7_4:-59749934 Msa1167320:CDS
GTGTTGGAAGAACCGGAAGT+AGG 0.595103 7_4:-59752756 Msa1167320:CDS
ACAAATATTTCTGAGTGACC+TGG 0.595652 7_4:+59751450 None:intergenic
AATCTACACATTCTTTGGGA+GGG 0.595704 7_4:-59749249 Msa1167320:three_prime_UTR
CATACATGCATGTTAAGCCT+AGG 0.595796 7_4:+59752972 None:intergenic
TCAATTATCTGAAGAGTCTG+AGG 0.595989 7_4:+59753893 None:intergenic
AAATCTACACATTCTTTGGG+AGG 0.596307 7_4:-59749250 Msa1167320:three_prime_UTR
GACTCTTCAGATAATTGAGA+AGG 0.596715 7_4:-59753888 Msa1167320:CDS
CGACCACATTAATTTCTTCG+GGG 0.597538 7_4:-59750780 Msa1167320:CDS
TTCTTTCCAGCCTTCCCTTG+CGG 0.598633 7_4:+59750700 None:intergenic
AAATAGGGTTTAAGCCTACT+CGG 0.599873 7_4:-59750819 Msa1167320:CDS
CCAGCTCCATCTGTGAAGAG+TGG 0.601958 7_4:-59750898 Msa1167320:CDS
GAAGCTGAACCATTGACCGC+GGG 0.604224 7_4:+59753851 None:intergenic
GGTACATTATCAGACAAACC+AGG 0.604517 7_4:+59752550 None:intergenic
TAGGAAAGCAGCTAAGGCAA+TGG 0.605790 7_4:+59749566 None:intergenic
ATTCTGCAATACATACAGAC+AGG 0.606020 7_4:-59753978 Msa1167320:CDS
TTAGATAGATCGAGAGAACC+AGG 0.607166 7_4:-59755713 Msa1167320:CDS
ACAACTTGAGCTCAGACCCA+TGG 0.607186 7_4:-59752516 Msa1167320:CDS
AGGGACGAGTGGATGTTCAA+GGG 0.609571 7_4:-59749935 Msa1167320:CDS
CTCTGCCAAAACTACCGCAA+GGG 0.611035 7_4:-59750714 Msa1167320:CDS
GCCAAAACTACCGCAAGGGA+AGG 0.612070 7_4:-59750710 Msa1167320:CDS
TCTGTTCCTGAAAAGAGCAT+CGG 0.616052 7_4:-59752835 Msa1167320:CDS
ATGATGATAATAAAACAGAC+GGG 0.617056 7_4:-59750048 Msa1167320:CDS
CGGAGGAAGAGGAGTTCATG+TGG 0.617778 7_4:-59752585 Msa1167320:CDS
AAAACATCTCAACATTTGGG+TGG 0.617967 7_4:-59751177 Msa1167320:CDS
AAAGAAAATCAAAGGAGTGG+GGG 0.618293 7_4:+59749277 None:intergenic
GAAGCTTATCAAGGGTACCC+AGG 0.619064 7_4:-59749633 Msa1167320:three_prime_UTR
ACTCTGCCAAAACTACCGCA+AGG 0.619475 7_4:-59750715 Msa1167320:CDS
TCCGCACAAGAATCAATAAG+CGG 0.621141 7_4:-59755849 Msa1167320:five_prime_UTR
AACTACAGTGCCAAGTGAGA+CGG 0.621357 7_4:-59750521 Msa1167320:CDS
AGGTGAAGACTGTTCTGAAG+GGG 0.621418 7_4:+59751290 None:intergenic
AAACCTCAGCAACAGCAGCT+GGG 0.621875 7_4:-59751027 Msa1167320:CDS
TTTAAGCCTACTCGGTCAGG+TGG 0.622249 7_4:-59750811 Msa1167320:CDS
AGAGCTGGTGACTCAGTACA+AGG 0.624110 7_4:-59755498 Msa1167320:CDS
GACTCTGAAAGTAGTGATGG+TGG 0.625930 7_4:-59755554 Msa1167320:CDS
GTTGGAGACTGTTGTCGCAA+AGG 0.627501 7_4:+59751270 None:intergenic
GATGCGGCGGTGGTTGAGGG+TGG 0.627658 7_4:+59755522 None:intergenic
GGGGCATTCATCATTATCAT+GGG 0.628071 7_4:-59751514 Msa1167320:CDS
TGCTGGAGAGAATCTTTCTG+CGG 0.629304 7_4:-59755417 Msa1167320:CDS
AGTTTAATAGACACTTGGAA+TGG 0.631756 7_4:-59750204 Msa1167320:CDS
TTAAGCCAGAAGCTTATCAA+GGG 0.633280 7_4:-59749641 Msa1167320:three_prime_UTR
GTTCCTGAAAAGAGCATCGG+CGG 0.634573 7_4:-59752832 Msa1167320:CDS
TTCATATTGATGAATGAATG+GGG 0.636383 7_4:+59755969 None:intergenic
GTGTTGCAGAGACCTTATCC+GGG 0.636826 7_4:-59752723 Msa1167320:CDS
CTTGAGCTCAGACCCATGGA+TGG 0.637419 7_4:-59752512 Msa1167320:CDS
AAAAGAAAATCAAAGGAGTG+GGG 0.638637 7_4:+59749276 None:intergenic
ATAATTCTTCGATTACATGT+GGG 0.641758 7_4:+59750284 None:intergenic
ATTATCTGAAGAGTCTGAGG+AGG 0.642000 7_4:+59753896 None:intergenic
TCAGCCAAATTACGCATCGA+AGG 0.643348 7_4:+59751222 None:intergenic
AGAGACTCTGAAAGTAGTGA+TGG 0.643593 7_4:-59755557 Msa1167320:CDS
TGTAGCTCATCGATCAATCG+AGG 0.646360 7_4:+59755680 None:intergenic
ATTCAAATTCTTCGGCTGCG+AGG 0.650495 7_4:-59751401 Msa1167320:CDS
ATCGTAGCAACCCCAGAGGT+AGG 0.650618 7_4:+59755611 None:intergenic
TGATTGAGACAAGGCAAGCG+AGG 0.653277 7_4:+59750372 None:intergenic
GAAGGACCACCTGACCGAGT+AGG 0.653335 7_4:+59750805 None:intergenic
GAGGTAGGTTGTTGTCGTTG+AGG 0.655687 7_4:+59755626 None:intergenic
GAAACAACTACCATCATCTG+GGG 0.656842 7_4:-59751535 Msa1167320:CDS
TTAGTATGCAACGAGAACCT+GGG 0.656890 7_4:+59749616 None:intergenic
TGTGCTAGTTGATTGAGACA+AGG 0.659929 7_4:+59750363 None:intergenic
GAACAATCCAGATAGCGAGA+TGG 0.661154 7_4:-59749900 Msa1167320:CDS
ACTGTCAGGAAAGGGACGAG+TGG 0.661605 7_4:-59749946 Msa1167320:CDS
AAACAACTACCATCATCTGG+GGG 0.664219 7_4:-59751534 Msa1167320:CDS
GGAGGAAGAGGAGTTCATGT+GGG 0.666115 7_4:-59752584 Msa1167320:CDS
CTGTCTAAGAGATAAAGCGA+AGG 0.669079 7_4:+59754373 None:intergenic
AATCACAAGAGAAGGATATG+CGG 0.670294 7_4:-59751083 Msa1167320:CDS
ATGCAAATGAAGACGCAGAG+AGG 0.671037 7_4:-59753034 Msa1167320:CDS
AGTTGCTGACTCTGTTCCTG+CGG 0.676828 7_4:+59750540 None:intergenic
AGCAGCAATTTGATTCTGAG+GGG 0.679911 7_4:-59751320 Msa1167320:CDS
TCTACTTCCTCCAACAATCG+CGG 0.682019 7_4:-59750655 Msa1167320:CDS
CTTTGCTGTCAGACTACCCG+AGG 0.682806 7_4:-59754314 Msa1167320:intron
ACGTCTTCAGCAGTCCAGCA+GGG 0.683190 7_4:-59753744 Msa1167320:intron
GTATTGTTAAGAATATTGGG+CGG 0.684810 7_4:-59754351 Msa1167320:CDS
GTACATTATCAGACAAACCA+GGG 0.685272 7_4:+59752551 None:intergenic
AGAAGCTGAACCATTGACCG+CGG 0.688294 7_4:+59753850 None:intergenic
TTGATCGATGAGCTACAACA+AGG 0.688797 7_4:-59755674 Msa1167320:CDS
TGGAGAACCTAGTGACGCGG+CGG 0.688959 7_4:+59750753 None:intergenic
GGGCGGATTTGACACCTATG+GGG 0.689603 7_4:-59749392 Msa1167320:three_prime_UTR
GATGAACTCCCACATCATTG+CGG 0.690002 7_4:-59750259 Msa1167320:CDS
TGAGTCACCAGCTCTTGATG+CGG 0.698871 7_4:+59755506 None:intergenic
TTAAGCCTAGGATCCAGCCA+TGG 0.699790 7_4:+59752984 None:intergenic
GGAACTCAACTTCAATCCCG+CGG 0.701859 7_4:-59753867 Msa1167320:CDS
AGACCCCGAAGAAATTAATG+TGG 0.705849 7_4:+59750777 None:intergenic
AGATGGAAAGTAGAAATGTG+GGG 0.706843 7_4:-59749883 Msa1167320:CDS
GGACGAGTGGATGTTCAAGG+GGG 0.711357 7_4:-59749933 Msa1167320:CDS
GGTCATCTTCATCCAAACGG+CGG 0.713284 7_4:-59749340 Msa1167320:three_prime_UTR
CAATGCTTGTGTGTATTGTG+TGG 0.715495 7_4:-59749989 Msa1167320:CDS
TCACAAGAGAAGGATATGCG+GGG 0.724395 7_4:-59751081 Msa1167320:CDS
TCTGAAAGTAGTGATGGTGG+CGG 0.725899 7_4:-59755551 Msa1167320:CDS
ATTTGGAGAACCTAGTGACG+CGG 0.733407 7_4:+59750750 None:intergenic
TGATTCAAAATTGTACAACG+AGG 0.733693 7_4:+59755922 None:intergenic
ACGACAACAACCTACCTCTG+GGG 0.737955 7_4:-59755621 Msa1167320:CDS
AACAACTACCATCATCTGGG+GGG 0.742353 7_4:-59751533 Msa1167320:CDS
CAACATCGTAGCAACCCCAG+AGG 0.765435 7_4:+59755607 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATTTGATGAAAT+TGG - chr7_4:59751588-59751607 Msa1167320:CDS 10.0%
!! TTATTAGTAATTTCATTAAT+TGG + chr7_4:59753484-59753503 None:intergenic 10.0%
!!! AAATTTTAGTGTTAGAATTA+GGG - chr7_4:59749466-59749485 Msa1167320:three_prime_UTR 15.0%
!! ATAGTCAAATTAGTAATTAT+CGG + chr7_4:59749807-59749826 None:intergenic 15.0%
!!! ATTGTAATTGATTTTGAATT+TGG - chr7_4:59749960-59749979 Msa1167320:CDS 15.0%
!! TTCAAAAAGAATAAATTTCT+AGG - chr7_4:59750280-59750299 Msa1167320:CDS 15.0%
!! GAAAAAAGAAAAACATATTT+AGG - chr7_4:59750326-59750345 Msa1167320:CDS 15.0%
!!! CATATTTTAGATATCAAAAA+AGG - chr7_4:59751915-59751934 Msa1167320:intron 15.0%
!!! TATAACTTGTCAAATTTTAA+AGG + chr7_4:59752065-59752084 None:intergenic 15.0%
!!! GTTATCATATTTTAATAGAA+TGG - chr7_4:59752341-59752360 Msa1167320:intron 15.0%
!!! TTTTTTAAGTCAACAAAATT+AGG + chr7_4:59753369-59753388 None:intergenic 15.0%
!!! TTGATAACTTTATTTTATGA+TGG - chr7_4:59755827-59755846 Msa1167320:five_prime_UTR 15.0%
!! ATTCATATTGATGAATGAAT+GGG + chr7_4:59749282-59749301 None:intergenic 20.0%
!! AATTCATATTGATGAATGAA+TGG + chr7_4:59749283-59749302 None:intergenic 20.0%
!! ATTCATTCATCAATATGAAT+TGG - chr7_4:59749282-59749301 Msa1167320:three_prime_UTR 20.0%
!! TTCATTCATCAATATGAATT+GGG - chr7_4:59749283-59749302 Msa1167320:three_prime_UTR 20.0%
!! CTAATTCTAACACTAAAATT+TGG + chr7_4:59749467-59749486 None:intergenic 20.0%
!!! CAAATTTTAGTGTTAGAATT+AGG - chr7_4:59749465-59749484 Msa1167320:three_prime_UTR 20.0%
!!! TGTTTTGTTTGTATCATTTA+TGG - chr7_4:59749919-59749938 Msa1167320:CDS 20.0%
!!! ATAAATTTCTAGGTTTTATG+CGG - chr7_4:59750290-59750309 Msa1167320:CDS 20.0%
!!! TTTTTTGTGTCATTATGAAA+AGG - chr7_4:59750349-59750368 Msa1167320:CDS 20.0%
!!! TTTTTGTGTCATTATGAAAA+GGG - chr7_4:59750350-59750369 Msa1167320:CDS 20.0%
!! ACGATGAATTAATATTAGAT+AGG - chr7_4:59750393-59750412 Msa1167320:CDS 20.0%
!! ACAGTATTGTTAAGAATATT+GGG - chr7_4:59750893-59750912 Msa1167320:CDS 20.0%
!! TGAAATGTTTAGATTTGATT+TGG - chr7_4:59751082-59751101 Msa1167320:CDS 20.0%
!!! GTTAGATGATTCATTTTTTA+TGG + chr7_4:59751142-59751161 None:intergenic 20.0%
!! TGAAAAATTCCATTTATTGA+CGG + chr7_4:59751164-59751183 None:intergenic 20.0%
!! TAAAATTAGAAAATACTCGA+AGG + chr7_4:59751198-59751217 None:intergenic 20.0%
!! TTAAGTCTGTAAAGATTATT+AGG + chr7_4:59751846-59751865 None:intergenic 20.0%
!! TTTGTAAATTTCTAACTTGA+AGG + chr7_4:59752914-59752933 None:intergenic 20.0%
!! AATTATGTCTTAGGTTTATT+AGG + chr7_4:59753415-59753434 None:intergenic 20.0%
!! AAATTAGGAAATTATGTCTT+AGG + chr7_4:59753424-59753443 None:intergenic 20.0%
!! CATAATTTCCTAATTTAACT+TGG - chr7_4:59753428-59753447 Msa1167320:intron 20.0%
!! GATAATTATGATTTAGTTAC+AGG + chr7_4:59753515-59753534 None:intergenic 20.0%
!! TATGATGATAATAAAACAGA+CGG - chr7_4:59755198-59755217 Msa1167320:intron 20.0%
!!! TTAGTCTATTTGAATTTTGA+AGG - chr7_4:59755498-59755517 Msa1167320:CDS 20.0%
!! ACAACAAAAAGAAACAAAAA+GGG + chr7_4:59755728-59755747 None:intergenic 20.0%
!! TACAACAAAAAGAAACAAAA+AGG + chr7_4:59755729-59755748 None:intergenic 20.0%
!! ATTTGACAAAAGAAAATCAA+AGG + chr7_4:59755981-59756000 None:intergenic 20.0%
!! ATTAGATTTTATCACTTCAC+TGG + chr7_4:59749138-59749157 None:intergenic 25.0%
! TTCATATTGATGAATGAATG+GGG + chr7_4:59749281-59749300 None:intergenic 25.0%
! TCATTCATCAATATGAATTG+GGG - chr7_4:59749284-59749303 Msa1167320:three_prime_UTR 25.0%
!! GATTCAATTTTTCATGAACA+TGG - chr7_4:59749494-59749513 Msa1167320:three_prime_UTR 25.0%
! ACTAATTTGACTATAATTGC+TGG - chr7_4:59749813-59749832 Msa1167320:intron 25.0%
! ACAAAACAAGAACAATTTCT+CGG + chr7_4:59749907-59749926 None:intergenic 25.0%
!!! GAAGTTTTATCATGGAAAAA+TGG - chr7_4:59750070-59750089 Msa1167320:CDS 25.0%
!! TTCATCCATTTTATAGTTGT+TGG - chr7_4:59750125-59750144 Msa1167320:CDS 25.0%
! CATTATGAAAAGGGAAAAAA+AGG - chr7_4:59750359-59750378 Msa1167320:CDS 25.0%
!!! TCAGTTTATTTTCTCGAATA+GGG - chr7_4:59750642-59750661 Msa1167320:CDS 25.0%
! TTGATGCTAAGTTATAACAT+AGG - chr7_4:59750688-59750707 Msa1167320:CDS 25.0%
! TGATGCTAAGTTATAACATA+GGG - chr7_4:59750689-59750708 Msa1167320:CDS 25.0%
! ACAAATGTAAACAAGGATTA+AGG + chr7_4:59750743-59750762 None:intergenic 25.0%
!! TAATCCTTGTTTACATTTGT+TGG - chr7_4:59750743-59750762 Msa1167320:CDS 25.0%
!! AATCCTTGTTTACATTTGTT+GGG - chr7_4:59750744-59750763 Msa1167320:CDS 25.0%
!!! TTGTCGATTTGTTATAAGAA+AGG - chr7_4:59750795-59750814 Msa1167320:CDS 25.0%
!!! TGTCGATTTGTTATAAGAAA+GGG - chr7_4:59750796-59750815 Msa1167320:CDS 25.0%
! AATTATGTTAATGACTTTCC+AGG - chr7_4:59750831-59750850 Msa1167320:CDS 25.0%
! GACAGTATTGTTAAGAATAT+TGG - chr7_4:59750892-59750911 Msa1167320:CDS 25.0%
!!! TTAGATTTGATTTGGTTACA+TGG - chr7_4:59751090-59751109 Msa1167320:CDS 25.0%
!!! TTATACACGCATTTTTAACT+AGG - chr7_4:59751215-59751234 Msa1167320:CDS 25.0%
! CTAAAATGTAAAGGAGTAAT+TGG + chr7_4:59751247-59751266 None:intergenic 25.0%
!! CAATTACTCCTTTACATTTT+AGG - chr7_4:59751245-59751264 Msa1167320:CDS 25.0%
! TGAATCCCAAATATTTAGAA+AGG - chr7_4:59751478-59751497 Msa1167320:CDS 25.0%
! TATGTAATCTGTTGCATTAA+AGG + chr7_4:59751554-59751573 None:intergenic 25.0%
!!! ATTTTTGGCCTACTATATTA+TGG - chr7_4:59751778-59751797 Msa1167320:intron 25.0%
!!! TTTTTGGCCTACTATATTAT+GGG - chr7_4:59751779-59751798 Msa1167320:intron 25.0%
! TTTGTTCATAGTATGACATA+TGG - chr7_4:59751812-59751831 Msa1167320:intron 25.0%
!! TGATAATTTAAAGGCATAGA+GGG + chr7_4:59751986-59752005 None:intergenic 25.0%
!!! GTTGATTCGTGATAATTTAA+AGG + chr7_4:59751995-59752014 None:intergenic 25.0%
!!! TCAAATTTTAAAGGCATAGA+GGG + chr7_4:59752056-59752075 None:intergenic 25.0%
!!! TAAAGGAGTATTTGATGATA+TGG - chr7_4:59752175-59752194 Msa1167320:intron 25.0%
! ACAGATTGAATAGTATAAAG+AGG + chr7_4:59752319-59752338 None:intergenic 25.0%
! TTCTAGTGTTTCAAATAGTT+TGG - chr7_4:59752462-59752481 Msa1167320:intron 25.0%
! TCTAGTGTTTCAAATAGTTT+GGG - chr7_4:59752463-59752482 Msa1167320:intron 25.0%
! GATTTGAAAAACTATGTTTG+AGG + chr7_4:59752567-59752586 None:intergenic 25.0%
! TAATTGGGAAAAAACTGAAT+TGG + chr7_4:59752831-59752850 None:intergenic 25.0%
!! TTTTTCCCAATTATGAAATG+AGG - chr7_4:59752838-59752857 Msa1167320:CDS 25.0%
!!! ATGTCATCATATTTCAAGTT+GGG + chr7_4:59753129-59753148 None:intergenic 25.0%
! AAGTAAATGTCTATCACAAT+AGG - chr7_4:59753201-59753220 Msa1167320:intron 25.0%
! AGTAAATGTCTATCACAATA+GGG - chr7_4:59753202-59753221 Msa1167320:intron 25.0%
!! AGCAACAAAATTTTTGTATC+AGG - chr7_4:59753243-59753262 Msa1167320:intron 25.0%
! ATCTTATGCCAAGTTAAATT+AGG + chr7_4:59753439-59753458 None:intergenic 25.0%
! TATTAACCTTTGTTCCAATT+GGG + chr7_4:59753673-59753692 None:intergenic 25.0%
! TTATTAACCTTTGTTCCAAT+TGG + chr7_4:59753674-59753693 None:intergenic 25.0%
! ATTGGAACAAAGGTTAATAA+AGG - chr7_4:59753674-59753693 Msa1167320:intron 25.0%
! AATAGGAATGTCCAAAATTA+CGG - chr7_4:59753901-59753920 Msa1167320:CDS 25.0%
! TCTTAAAACATCTCAACATT+TGG - chr7_4:59754066-59754085 Msa1167320:intron 25.0%
! CTTAAAACATCTCAACATTT+GGG - chr7_4:59754067-59754086 Msa1167320:intron 25.0%
! AAAGAAGTTGCTAAAGATAA+CGG + chr7_4:59754193-59754212 None:intergenic 25.0%
!! CTTCTCGTAATTGATTTATT+GGG + chr7_4:59754382-59754401 None:intergenic 25.0%
!! ACTTCTCGTAATTGATTTAT+TGG + chr7_4:59754383-59754402 None:intergenic 25.0%
!! AAGATTTGAAATTGGATTCA+AGG + chr7_4:59754656-59754675 None:intergenic 25.0%
!! GAGCTTAAAAGATTTGAAAT+TGG + chr7_4:59754664-59754683 None:intergenic 25.0%
! ACAGAAATTAGAAATCTCAT+TGG - chr7_4:59754904-59754923 Msa1167320:intron 25.0%
! ATAATTCTTCGATTACATGT+GGG + chr7_4:59754966-59754985 None:intergenic 25.0%
! AATAATTCTTCGATTACATG+TGG + chr7_4:59754967-59754986 None:intergenic 25.0%
! ACATGTAATCGAAGAATTAT+TGG - chr7_4:59754966-59754985 Msa1167320:intron 25.0%
! ACAAAAGAAAGAGAACAAAA+TGG - chr7_4:59755072-59755091 Msa1167320:intron 25.0%
! ATGATGATAATAAAACAGAC+GGG - chr7_4:59755199-59755218 Msa1167320:intron 25.0%
! AAGACTCATAGTTAATTGAA+TGG - chr7_4:59755446-59755465 Msa1167320:CDS 25.0%
!!! GTTCAAATTTTTGTACTGAT+TGG - chr7_4:59755524-59755543 Msa1167320:CDS 25.0%
!! ATTCATAACTTGTATTGCAT+TGG - chr7_4:59755575-59755594 Msa1167320:CDS 25.0%
!!! CAATGGTTTTAAATGTGAAA+AGG + chr7_4:59755667-59755686 None:intergenic 25.0%
!!! ACTTTATTTTATGATGGTGA+TGG - chr7_4:59755833-59755852 Msa1167320:five_prime_UTR 25.0%
!!! CTTTATTTTATGATGGTGAT+GGG - chr7_4:59755834-59755853 Msa1167320:five_prime_UTR 25.0%
!!! TTTATTTTATGATGGTGATG+GGG - chr7_4:59755835-59755854 Msa1167320:five_prime_UTR 25.0%
! TTTATGCAGCTGATAAATTA+AGG + chr7_4:59756074-59756093 None:intergenic 25.0%
ATCAATATGAATTGGGGATT+AGG - chr7_4:59749290-59749309 Msa1167320:three_prime_UTR 30.0%
TCAATATGAATTGGGGATTA+GGG - chr7_4:59749291-59749310 Msa1167320:three_prime_UTR 30.0%
TGATTCAAAATTGTACAACG+AGG + chr7_4:59749328-59749347 None:intergenic 30.0%
! TGCTTGTGCTATTGATAAAT+TGG - chr7_4:59750027-59750046 Msa1167320:CDS 30.0%
! GCTTGTGCTATTGATAAATT+GGG - chr7_4:59750028-59750047 Msa1167320:CDS 30.0%
TGAATGCTAGTTAGAAAAGA+AGG - chr7_4:59750093-59750112 Msa1167320:CDS 30.0%
CGTTACCAACAACTATAAAA+TGG + chr7_4:59750133-59750152 None:intergenic 30.0%
TACAAATTCTACAAAAGACC+AGG + chr7_4:59750547-59750566 None:intergenic 30.0%
TTGTAGAATTTGTACGCAAT+AGG - chr7_4:59750553-59750572 Msa1167320:CDS 30.0%
TGTAGAATTTGTACGCAATA+GGG - chr7_4:59750554-59750573 Msa1167320:CDS 30.0%
!! GTCAGTTTATTTTCTCGAAT+AGG - chr7_4:59750641-59750660 Msa1167320:CDS 30.0%
! ATCCTTGTTTACATTTGTTG+GGG - chr7_4:59750745-59750764 Msa1167320:CDS 30.0%
GTATTGTTAAGAATATTGGG+CGG - chr7_4:59750896-59750915 Msa1167320:CDS 30.0%
TATTGTTAAGAATATTGGGC+GGG - chr7_4:59750897-59750916 Msa1167320:CDS 30.0%
TCTATCATCTTTCCTTCTAT+TGG - chr7_4:59750967-59750986 Msa1167320:CDS 30.0%
!!! TTCATTTTTTATGGCAATGC+CGG + chr7_4:59751133-59751152 None:intergenic 30.0%
ATCATCTAACCGTCAATAAA+TGG - chr7_4:59751152-59751171 Msa1167320:CDS 30.0%
GCAGAATACCTAAAATGTAA+AGG + chr7_4:59751256-59751275 None:intergenic 30.0%
! CTAAATATTTGGGATTCACA+TGG + chr7_4:59751476-59751495 None:intergenic 30.0%
CGTTGCCTTTCTAAATATTT+GGG + chr7_4:59751486-59751505 None:intergenic 30.0%
ACGTTGCCTTTCTAAATATT+TGG + chr7_4:59751487-59751506 None:intergenic 30.0%
AATCTGTTGCATTAAAGGAT+TGG + chr7_4:59751549-59751568 None:intergenic 30.0%
GTGTTCCTTGAATAATGAAA+CGG - chr7_4:59751625-59751644 Msa1167320:intron 30.0%
! CCTACTATATTATGGGTTTT+GGG - chr7_4:59751786-59751805 Msa1167320:intron 30.0%
! CTACTATATTATGGGTTTTG+GGG - chr7_4:59751787-59751806 Msa1167320:intron 30.0%
! GTGATAATTTAAAGGCATAG+AGG + chr7_4:59751987-59752006 None:intergenic 30.0%
!! GTCAAATTTTAAAGGCATAG+AGG + chr7_4:59752057-59752076 None:intergenic 30.0%
AGAATTAAGTACCAGAGATA+GGG + chr7_4:59752123-59752142 None:intergenic 30.0%
AAGAATTAAGTACCAGAGAT+AGG + chr7_4:59752124-59752143 None:intergenic 30.0%
!! TTTTGTTTCATGCAGACTAA+AGG - chr7_4:59752158-59752177 Msa1167320:intron 30.0%
AATAATCAGCATACTCATAG+AGG - chr7_4:59752376-59752395 Msa1167320:intron 30.0%
GTCAAAGAACTGGAAAAATT+CGG - chr7_4:59752642-59752661 Msa1167320:CDS 30.0%
CTGAATTGGACAAACAAATT+GGG + chr7_4:59752817-59752836 None:intergenic 30.0%
ACTGAATTGGACAAACAAAT+TGG + chr7_4:59752818-59752837 None:intergenic 30.0%
AAGCACCTCATTTCATAATT+GGG + chr7_4:59752846-59752865 None:intergenic 30.0%
! AAAGCACCTCATTTCATAAT+TGG + chr7_4:59752847-59752866 None:intergenic 30.0%
CAAAACAAGGTAGATCAAAT+TGG + chr7_4:59752870-59752889 None:intergenic 30.0%
!!! GATCTACCTTGTTTTGTTTT+TGG - chr7_4:59752874-59752893 Msa1167320:CDS 30.0%
CACATTCCAAAAACAAAACA+AGG + chr7_4:59752883-59752902 None:intergenic 30.0%
ATTTCTAACTTGAAGGACAA+GGG + chr7_4:59752907-59752926 None:intergenic 30.0%
AATTTCTAACTTGAAGGACA+AGG + chr7_4:59752908-59752927 None:intergenic 30.0%
ATTGCCATAAAATTACTTGC+AGG + chr7_4:59752949-59752968 None:intergenic 30.0%
! ATTTTTATCAAAACCAGCCA+GGG + chr7_4:59752991-59753010 None:intergenic 30.0%
!! CACAAATGAATTTTCAAGAC+AGG + chr7_4:59753075-59753094 None:intergenic 30.0%
!! TGTCATCATATTTCAAGTTG+GGG + chr7_4:59753128-59753147 None:intergenic 30.0%
! GATGTCATCATATTTCAAGT+TGG + chr7_4:59753130-59753149 None:intergenic 30.0%
AGTAAAGCAAACTAAAGAAG+AGG - chr7_4:59753152-59753171 Msa1167320:intron 30.0%
GTAAAGCAAACTAAAGAAGA+GGG - chr7_4:59753153-59753172 Msa1167320:intron 30.0%
AACATGACAAAATGCTTGAT+CGG - chr7_4:59753177-59753196 Msa1167320:intron 30.0%
TAGGCATATTTATTATCCCA+CGG + chr7_4:59753350-59753369 None:intergenic 30.0%
CTGCATGCAAAAAACAAAAT+TGG + chr7_4:59753621-59753640 None:intergenic 30.0%
!!! CAATTTTGTTTTTTGCATGC+AGG - chr7_4:59753619-59753638 Msa1167320:intron 30.0%
TCATATTCAATTTGGCACTT+GGG + chr7_4:59753775-59753794 None:intergenic 30.0%
TTCATATTCAATTTGGCACT+TGG + chr7_4:59753776-59753795 None:intergenic 30.0%
!! ATATTTGTTTCTGCTCCTAA+TGG - chr7_4:59753812-59753831 Msa1167320:CDS 30.0%
ATAGGAATGTCCAAAATTAC+GGG - chr7_4:59753902-59753921 Msa1167320:CDS 30.0%
!!! TGAGATGTTTTAAGAGATGT+TGG + chr7_4:59754061-59754080 None:intergenic 30.0%
TAAATCAATTACGAGAAGTC+TGG - chr7_4:59754384-59754403 Msa1167320:CDS 30.0%
AGAGTAGGTGAATAATCATT+TGG + chr7_4:59754517-59754536 None:intergenic 30.0%
! ATTCAAGGTATTCTTATTGG+CGG + chr7_4:59754641-59754660 None:intergenic 30.0%
! TGGATTCAAGGTATTCTTAT+TGG + chr7_4:59754644-59754663 None:intergenic 30.0%
!! CAATTCTGGAAGATTTTACT+GGG + chr7_4:59754834-59754853 None:intergenic 30.0%
!! TCAATTCTGGAAGATTTTAC+TGG + chr7_4:59754835-59754854 None:intergenic 30.0%
AGTAAAATCTTCCAGAATTG+AGG - chr7_4:59754834-59754853 Msa1167320:intron 30.0%
AGAACAGTTTAATAGACACT+TGG - chr7_4:59755038-59755057 Msa1167320:intron 30.0%
AGTTTAATAGACACTTGGAA+TGG - chr7_4:59755043-59755062 Msa1167320:intron 30.0%
ATTTGAAGATGTATACTGTC+AGG - chr7_4:59755287-59755306 Msa1167320:intron 30.0%
TTGTCAGATAACTCAATACT+TGG - chr7_4:59755408-59755427 Msa1167320:CDS 30.0%
! CAAAATTTGTTTGACTGCTT+AGG + chr7_4:59755703-59755722 None:intergenic 30.0%
!! GTTTCTTTTTGTTGTACTTG+AGG - chr7_4:59755733-59755752 Msa1167320:CDS 30.0%
AAAAGAAAATCAAAGGAGTG+GGG + chr7_4:59755974-59755993 None:intergenic 30.0%
CAAAAGAAAATCAAAGGAGT+GGG + chr7_4:59755975-59755994 None:intergenic 30.0%
ACAAAAGAAAATCAAAGGAG+TGG + chr7_4:59755976-59755995 None:intergenic 30.0%
TGTCAAATCTACACATTCTT+TGG - chr7_4:59755993-59756012 Msa1167320:five_prime_UTR 30.0%
GTCAAATCTACACATTCTTT+GGG - chr7_4:59755994-59756013 Msa1167320:five_prime_UTR 30.0%
TGTTTGTGGTAACATTCTTG+AGG - chr7_4:59749872-59749891 Msa1167320:CDS 35.0%
!! AATTGGGTTAGTGTTGTTCT+CGG - chr7_4:59750044-59750063 Msa1167320:CDS 35.0%
!! TATAGTTGTTGGTAACGTCT+AGG - chr7_4:59750136-59750155 Msa1167320:CDS 35.0%
!!! TTTCTTTTTTCTCGTGTGCA+TGG + chr7_4:59750317-59750336 None:intergenic 35.0%
TGCATTGCAATGATTCTGTT+AGG - chr7_4:59750432-59750451 Msa1167320:CDS 35.0%
AATTGCATATGGACTCCATT+AGG + chr7_4:59750485-59750504 None:intergenic 35.0%
GTCCATATGCAATTTACAAG+TGG - chr7_4:59750491-59750510 Msa1167320:CDS 35.0%
CAATAGGGACTAAGAATCTT+TGG - chr7_4:59750569-59750588 Msa1167320:CDS 35.0%
CAAATCGACAAACAAGCAAT+GGG + chr7_4:59750786-59750805 None:intergenic 35.0%
ACAAATCGACAAACAAGCAA+TGG + chr7_4:59750787-59750806 None:intergenic 35.0%
ATAGATAGATATCTGACCTC+GGG + chr7_4:59750952-59750971 None:intergenic 35.0%
GATAGATAGATATCTGACCT+CGG + chr7_4:59750953-59750972 None:intergenic 35.0%
AAGGAAGTAATGCCAATAGA+AGG + chr7_4:59750982-59751001 None:intergenic 35.0%
! GGATGATAATGCAATAGTTC+CGG - chr7_4:59751111-59751130 Msa1167320:CDS 35.0%
ATTCTGCAATACATACAGAC+AGG - chr7_4:59751269-59751288 Msa1167320:CDS 35.0%
AAAGATGCCTCATACTTGAA+TGG + chr7_4:59751308-59751327 None:intergenic 35.0%
!! TCAAGTATGAGGCATCTTTT+TGG - chr7_4:59751309-59751328 Msa1167320:CDS 35.0%
TCAATTATCTGAAGAGTCTG+AGG + chr7_4:59751357-59751376 None:intergenic 35.0%
GACTCTTCAGATAATTGAGA+AGG - chr7_4:59751359-59751378 Msa1167320:CDS 35.0%
AGACTGAGAATCACTTCTAA+GGG + chr7_4:59751433-59751452 None:intergenic 35.0%
TAACCAAGCTCAAAAGTTGA+TGG + chr7_4:59751671-59751690 None:intergenic 35.0%
! GCGTGAACTGTTCTAATTTT+TGG - chr7_4:59751763-59751782 Msa1167320:intron 35.0%
! GCCTACTATATTATGGGTTT+TGG - chr7_4:59751785-59751804 Msa1167320:intron 35.0%
CCCAAAACCCATAATATAGT+AGG + chr7_4:59751789-59751808 None:intergenic 35.0%
AGATATCAAAAAAGGCCTTC+CGG - chr7_4:59751923-59751942 Msa1167320:intron 35.0%
ATTATATCCATCGTCTCCAT+AGG + chr7_4:59752443-59752462 None:intergenic 35.0%
! GTTTCAAATAGTTTGGGTTC+AGG - chr7_4:59752469-59752488 Msa1167320:intron 35.0%
ATTTGGATGCACATAGCATA+AGG - chr7_4:59752608-59752627 Msa1167320:CDS 35.0%
AAAGAACTGGAAAAATTCGG+AGG - chr7_4:59752645-59752664 Msa1167320:CDS 35.0%
GTACATTATCAGACAAACCA+GGG + chr7_4:59752699-59752718 None:intergenic 35.0%
! CTCAAGTTGTTAGAGACATT+AGG + chr7_4:59752721-59752740 None:intergenic 35.0%
GCTTACCAAATTGTCTTCAT+CGG + chr7_4:59752761-59752780 None:intergenic 35.0%
!! TGGTAAGCTTGCTACAATAA+AGG - chr7_4:59752773-59752792 Msa1167320:CDS 35.0%
!! GGTAAGCTTGCTACAATAAA+GGG - chr7_4:59752774-59752793 Msa1167320:CDS 35.0%
! GCATCCTGCAAGTAATTTTA+TGG - chr7_4:59752942-59752961 Msa1167320:intron 35.0%
! CATTTTTATCAAAACCAGCC+AGG + chr7_4:59752992-59753011 None:intergenic 35.0%
!!! AGAAATTGACTTGTCGCTTT+TGG - chr7_4:59753019-59753038 Msa1167320:CDS 35.0%
AAATGTCTATCACAATAGGG+TGG - chr7_4:59753205-59753224 Msa1167320:intron 35.0%
AATGTCTATCACAATAGGGT+GGG - chr7_4:59753206-59753225 Msa1167320:intron 35.0%
!! TGGTAGTTGTTTCTTAACAG+TGG + chr7_4:59753705-59753724 None:intergenic 35.0%
AAGAAACAACTACCATCATC+TGG - chr7_4:59753710-59753729 Msa1167320:intron 35.0%
AGAAACAACTACCATCATCT+GGG - chr7_4:59753711-59753730 Msa1167320:intron 35.0%
ACCTGGCTTCATATTCAATT+TGG + chr7_4:59753783-59753802 None:intergenic 35.0%
! ACAAATATTTCTGAGTGACC+TGG + chr7_4:59753800-59753819 None:intergenic 35.0%
ACCCAAGCATTCAAATTCTT+CGG - chr7_4:59753838-59753857 Msa1167320:CDS 35.0%
GACATTCCTATTGTTGTATG+CGG + chr7_4:59753893-59753912 None:intergenic 35.0%
AAAACATCTCAACATTTGGG+TGG - chr7_4:59754070-59754089 Msa1167320:intron 35.0%
AATCACAAGAGAAGGATATG+CGG - chr7_4:59754164-59754183 Msa1167320:intron 35.0%
!! AAAGGAGCTTTAGATTTGAG+TGG + chr7_4:59754283-59754302 None:intergenic 35.0%
!!! TGACTTTTCTGAAGTCACTT+TGG + chr7_4:59754314-59754333 None:intergenic 35.0%
AGTAACTGTCCATCTCAAAT+AGG - chr7_4:59754412-59754431 Msa1167320:intron 35.0%
GTAACTGTCCATCTCAAATA+GGG - chr7_4:59754413-59754432 Msa1167320:intron 35.0%
AAATAGGGTTTAAGCCTACT+CGG - chr7_4:59754428-59754447 Msa1167320:intron 35.0%
TGATTGTAGCATCAAGAAGA+TGG - chr7_4:59755097-59755116 Msa1167320:intron 35.0%
AAGATGTATACTGTCAGGAA+AGG - chr7_4:59755292-59755311 Msa1167320:intron 35.0%
AGATGTATACTGTCAGGAAA+GGG - chr7_4:59755293-59755312 Msa1167320:intron 35.0%
GAGATGGAAAGTAGAAATGT+GGG - chr7_4:59755363-59755382 Msa1167320:intron 35.0%
AGATGGAAAGTAGAAATGTG+GGG - chr7_4:59755364-59755383 Msa1167320:intron 35.0%
AAGCATCTAGCATGAATGAT+GGG + chr7_4:59755390-59755409 None:intergenic 35.0%
TTAAGCCAGAAGCTTATCAA+GGG - chr7_4:59755606-59755625 Msa1167320:CDS 35.0%
CGTTGCATACTAAAACTAGA+TGG - chr7_4:59755641-59755660 Msa1167320:CDS 35.0%
AAAGAAAATCAAAGGAGTGG+GGG + chr7_4:59755973-59755992 None:intergenic 35.0%
AAATCTACACATTCTTTGGG+AGG - chr7_4:59755997-59756016 Msa1167320:five_prime_UTR 35.0%
! AATCTACACATTCTTTGGGA+GGG - chr7_4:59755998-59756017 Msa1167320:five_prime_UTR 35.0%
CACAACATTTGGTCAAATGT+TGG + chr7_4:59756128-59756147 None:intergenic 35.0%
GAGAGGTGAAAGAGAAAAGA+GGG + chr7_4:59749213-59749232 None:intergenic 40.0%
AAGAAAGAGAGAGAGAGAGA+GGG + chr7_4:59749235-59749254 None:intergenic 40.0%
AAAGAAAGAGAGAGAGAGAG+AGG + chr7_4:59749236-59749255 None:intergenic 40.0%
! TGCGGATTTTATTGAGAGTG+TGG + chr7_4:59749384-59749403 None:intergenic 40.0%
TCCGCACAAGAATCAATAAG+CGG - chr7_4:59749398-59749417 Msa1167320:three_prime_UTR 40.0%
!! TCCGCTTATTGATTCTTGTG+CGG + chr7_4:59749402-59749421 None:intergenic 40.0%
TTAGATAGATCGAGAGAACC+AGG - chr7_4:59749534-59749553 Msa1167320:three_prime_UTR 40.0%
TTGATCGATGAGCTACAACA+AGG - chr7_4:59749573-59749592 Msa1167320:three_prime_UTR 40.0%
AAACGTTCGTGAAGTTGGAT+TGG + chr7_4:59749601-59749620 None:intergenic 40.0%
! AGAGACTCTGAAAGTAGTGA+TGG - chr7_4:59749690-59749709 Msa1167320:intron 40.0%
!! ATTGGGTTAGTGTTGTTCTC+GGG - chr7_4:59750045-59750064 Msa1167320:CDS 40.0%
!! CTCGGGTAGAAGTTTTATCA+TGG - chr7_4:59750062-59750081 Msa1167320:CDS 40.0%
!!! TAGGTTTTCTGAAACCCACT+TGG - chr7_4:59750155-59750174 Msa1167320:CDS 40.0%
!!! AGGTTTTCTGAAACCCACTT+GGG - chr7_4:59750156-59750175 Msa1167320:CDS 40.0%
CAATGATTCTGTTAGGTACC+AGG - chr7_4:59750439-59750458 Msa1167320:CDS 40.0%
ATTCTGTTAGGTACCAGGTT+TGG - chr7_4:59750444-59750463 Msa1167320:CDS 40.0%
TTCTGTTAGGTACCAGGTTT+GGG - chr7_4:59750445-59750464 Msa1167320:CDS 40.0%
TATGGACTCCATTAGGATAC+CGG + chr7_4:59750478-59750497 None:intergenic 40.0%
CGCCACTTGTAAATTGCATA+TGG + chr7_4:59750496-59750515 None:intergenic 40.0%
! ATAGGGCTGATGTCAACTTT+TGG - chr7_4:59750659-59750678 Msa1167320:CDS 40.0%
TGCCCCAACAAATGTAAACA+AGG + chr7_4:59750750-59750769 None:intergenic 40.0%
CTGTCTAAGAGATAAAGCGA+AGG + chr7_4:59750877-59750896 None:intergenic 40.0%
!!! TGAGGCATCTTTTTGGAACT+TGG - chr7_4:59751316-59751335 Msa1167320:CDS 40.0%
!!! CATCTTTTTGGAACTTGGAG+AGG - chr7_4:59751321-59751340 Msa1167320:CDS 40.0%
ATTATCTGAAGAGTCTGAGG+AGG + chr7_4:59751354-59751373 None:intergenic 40.0%
GAGACTGAGAATCACTTCTA+AGG + chr7_4:59751434-59751453 None:intergenic 40.0%
TCACATGGATGCTATGAGAT+GGG + chr7_4:59751461-59751480 None:intergenic 40.0%
TTCACATGGATGCTATGAGA+TGG + chr7_4:59751462-59751481 None:intergenic 40.0%
CAGCACCGTTTCATTATTCA+AGG + chr7_4:59751633-59751652 None:intergenic 40.0%
CTTGAATAATGAAACGGTGC+TGG - chr7_4:59751631-59751650 Msa1167320:intron 40.0%
! TCGTGATAAGTACTGTGAAC+CGG + chr7_4:59751945-59751964 None:intergenic 40.0%
! GGAGTATTTGATGATATGGC+TGG - chr7_4:59752179-59752198 Msa1167320:intron 40.0%
CATACATGCATGTTAAGCCT+AGG + chr7_4:59752278-59752297 None:intergenic 40.0%
! TCTGTTCCTGAAAAGAGCAT+CGG - chr7_4:59752412-59752431 Msa1167320:intron 40.0%
! AATAGTTTGGGTTCAGGTGT+TGG - chr7_4:59752475-59752494 Msa1167320:intron 40.0%
GCATCCAAATTCACAGACTT+CGG + chr7_4:59752598-59752617 None:intergenic 40.0%
GGTACATTATCAGACAAACC+AGG + chr7_4:59752700-59752719 None:intergenic 40.0%
ATAGGGTGGGAAAGGATAAT+TGG - chr7_4:59753219-59753238 Msa1167320:intron 40.0%
CGTTTCTATGCATCATTCCT+TGG + chr7_4:59753291-59753310 None:intergenic 40.0%
GAGTCATGCATAGATGTGAT+TGG + chr7_4:59753324-59753343 None:intergenic 40.0%
TGGTGTAATTGTAGAGTCCT+GGG + chr7_4:59753464-59753483 None:intergenic 40.0%
TTGGTGTAATTGTAGAGTCC+TGG + chr7_4:59753465-59753484 None:intergenic 40.0%
TTCCAATTGGGTGTGTGATT+TGG + chr7_4:59753661-59753680 None:intergenic 40.0%
GAAACAACTACCATCATCTG+GGG - chr7_4:59753712-59753731 Msa1167320:intron 40.0%
AAACAACTACCATCATCTGG+GGG - chr7_4:59753713-59753732 Msa1167320:intron 40.0%
! GGGGCATTCATCATTATCAT+GGG - chr7_4:59753733-59753752 Msa1167320:intron 40.0%
GCCAAATTGAATATGAAGCC+AGG - chr7_4:59753779-59753798 Msa1167320:CDS 40.0%
GCCGAAGAATTTGAATGCTT+GGG + chr7_4:59753842-59753861 None:intergenic 40.0%
AGCCGAAGAATTTGAATGCT+TGG + chr7_4:59753843-59753862 None:intergenic 40.0%
TCTATGCCGCATACAACAAT+AGG - chr7_4:59753884-59753903 Msa1167320:CDS 40.0%
ACAGCAGCAATTTGATTCTG+AGG - chr7_4:59753925-59753944 Msa1167320:CDS 40.0%
CAGCAGCAATTTGATTCTGA+GGG - chr7_4:59753926-59753945 Msa1167320:CDS 40.0%
AGCAGCAATTTGATTCTGAG+GGG - chr7_4:59753927-59753946 Msa1167320:CDS 40.0%
! AAGGTGAAGACTGTTCTGAA+GGG + chr7_4:59753961-59753980 None:intergenic 40.0%
AAAGGTGAAGACTGTTCTGA+AGG + chr7_4:59753962-59753981 None:intergenic 40.0%
AACCTGAACATTGGAACGAA+TGG + chr7_4:59754131-59754150 None:intergenic 40.0%
ATTCGTTCCAATGTTCAGGT+TGG - chr7_4:59754130-59754149 Msa1167320:intron 40.0%
CAAGTTACCAACCTGAACAT+TGG + chr7_4:59754140-59754159 None:intergenic 40.0%
CTTGCGAAAATCACAAGAGA+AGG - chr7_4:59754156-59754175 Msa1167320:intron 40.0%
ATCACAAGAGAAGGATATGC+GGG - chr7_4:59754165-59754184 Msa1167320:intron 40.0%
!! GTCACTTTGGCTTTGACTAA+AGG + chr7_4:59754301-59754320 None:intergenic 40.0%
ATGATTCCACTCTTCACAGA+TGG + chr7_4:59754358-59754377 None:intergenic 40.0%
GGCTTAAACCCTATTTGAGA+TGG + chr7_4:59754424-59754443 None:intergenic 40.0%
CGAAGAAATTAATGTGGTCG+GGG + chr7_4:59754467-59754486 None:intergenic 40.0%
CCGAAGAAATTAATGTGGTC+GGG + chr7_4:59754468-59754487 None:intergenic 40.0%
CCCGACCACATTAATTTCTT+CGG - chr7_4:59754465-59754484 Msa1167320:intron 40.0%
CCCGAAGAAATTAATGTGGT+CGG + chr7_4:59754469-59754488 None:intergenic 40.0%
CCGACCACATTAATTTCTTC+GGG - chr7_4:59754466-59754485 Msa1167320:intron 40.0%
CGACCACATTAATTTCTTCG+GGG - chr7_4:59754467-59754486 Msa1167320:intron 40.0%
AGACCCCGAAGAAATTAATG+TGG + chr7_4:59754473-59754492 None:intergenic 40.0%
TTATTGGCGGTATTTGAGCT+CGG + chr7_4:59754628-59754647 None:intergenic 40.0%
TTAAGCTCGTTAGTTGCGAA+AGG - chr7_4:59754676-59754695 Msa1167320:intron 40.0%
TGACAGCAATGCTTTCAGTT+TGG + chr7_4:59754768-59754787 None:intergenic 40.0%
AACTGAAGCAACTGGTAAAG+AGG + chr7_4:59754794-59754813 None:intergenic 40.0%
TGTGCTAGTTGATTGAGACA+AGG + chr7_4:59754887-59754906 None:intergenic 40.0%
TGCATTTCTCGAATGACATC+AGG + chr7_4:59754943-59754962 None:intergenic 40.0%
ATTGCGGTGATTGTGGTATT+AGG - chr7_4:59755004-59755023 Msa1167320:intron 40.0%
TAAAACAGACGGGAGTCAAT+TGG - chr7_4:59755209-59755228 Msa1167320:intron 40.0%
CACACAATACACACAAGCAT+TGG + chr7_4:59755260-59755279 None:intergenic 40.0%
CAATGCTTGTGTGTATTGTG+TGG - chr7_4:59755258-59755277 Msa1167320:intron 40.0%
CGAGATGGAAAGTAGAAATG+TGG - chr7_4:59755362-59755381 Msa1167320:intron 40.0%
CAAGCATCTAGCATGAATGA+TGG + chr7_4:59755391-59755410 None:intergenic 40.0%
!! ATAAGCTTCTGGCTTAACCT+TGG + chr7_4:59755603-59755622 None:intergenic 40.0%
GTTAAGCCAGAAGCTTATCA+AGG - chr7_4:59755605-59755624 Msa1167320:CDS 40.0%
TTAGTATGCAACGAGAACCT+GGG + chr7_4:59755634-59755653 None:intergenic 40.0%
TTTAGTATGCAACGAGAACC+TGG + chr7_4:59755635-59755654 None:intergenic 40.0%
!!! ATTTTATGATGGTGATGGGG+CGG - chr7_4:59755838-59755857 Msa1167320:five_prime_UTR 40.0%
CAAGGTCATCTTCATCCAAA+CGG - chr7_4:59755904-59755923 Msa1167320:five_prime_UTR 40.0%
GCATAATATTATCCGCCGTT+TGG + chr7_4:59755922-59755941 None:intergenic 40.0%
TGCGATGGGCGATTACTATT+GGG + chr7_4:59749168-59749187 None:intergenic 45.0%
AGTAGAAGAAAGGCTGCGAT+GGG + chr7_4:59749182-59749201 None:intergenic 45.0%
GGATCGAGAGAGTAGAAGAA+AGG + chr7_4:59749192-59749211 None:intergenic 45.0%
GGAGAGGTGAAAGAGAAAAG+AGG + chr7_4:59749214-59749233 None:intergenic 45.0%
TGTAGCTCATCGATCAATCG+AGG + chr7_4:59749570-59749589 None:intergenic 45.0%
TGAGGAAACGTTCGTGAAGT+TGG + chr7_4:59749606-59749625 None:intergenic 45.0%
AACGACAACAACCTACCTCT+GGG - chr7_4:59749625-59749644 Msa1167320:three_prime_UTR 45.0%
! GACTCTGAAAGTAGTGATGG+TGG - chr7_4:59749693-59749712 Msa1167320:intron 45.0%
!! TCTGAAAGTAGTGATGGTGG+CGG - chr7_4:59749696-59749715 Msa1167320:intron 45.0%
TGCTGGAGAGAATCTTTCTG+CGG - chr7_4:59749830-59749849 Msa1167320:CDS 45.0%
!! TTTCTGAAACCCACTTGGGT+TGG - chr7_4:59750160-59750179 Msa1167320:CDS 45.0%
GAATCAAACCAGAGACCTTG+AGG + chr7_4:59750224-59750243 None:intergenic 45.0%
ATTCTCCCCAGTACCAACTT+GGG - chr7_4:59750240-59750259 Msa1167320:CDS 45.0%
! CTAAACTAGCCTACCCAAGT+TGG + chr7_4:59750256-59750275 None:intergenic 45.0%
ATGGACTCCATTAGGATACC+GGG + chr7_4:59750477-59750496 None:intergenic 45.0%
CAAGTGGCGTTATTGAAACG+TGG - chr7_4:59750507-59750526 Msa1167320:CDS 45.0%
TTTGGAAACGTGTGTGTGTG+TGG - chr7_4:59750587-59750606 Msa1167320:CDS 45.0%
TTGGAAACGTGTGTGTGTGT+GGG - chr7_4:59750588-59750607 Msa1167320:CDS 45.0%
! GATAAAGCGAAGGCAGCTTT+TGG + chr7_4:59750867-59750886 None:intergenic 45.0%
CTCCTGTCCATTCAAGTATG+AGG - chr7_4:59751298-59751317 Msa1167320:CDS 45.0%
TGCCTCATACTTGAATGGAC+AGG + chr7_4:59751303-59751322 None:intergenic 45.0%
AATCATTTCACCTACCCTGC+TGG + chr7_4:59751520-59751539 None:intergenic 45.0%
! CTGCCATCAACTTTTGAGCT+TGG - chr7_4:59751665-59751684 Msa1167320:intron 45.0%
! GATAAGTACTGTGAACCGGA+AGG + chr7_4:59751941-59751960 None:intergenic 45.0%
CCAGAGATAGGGTGTAGAAA+AGG + chr7_4:59752112-59752131 None:intergenic 45.0%
! CCTTTTCTACACCCTATCTC+TGG - chr7_4:59752109-59752128 Msa1167320:intron 45.0%
ATGCAAATGAAGACGCAGAG+AGG - chr7_4:59752213-59752232 Msa1167320:intron 45.0%
ACCTTATCCGGGCAAAGAAA+TGG - chr7_4:59752535-59752554 Msa1167320:CDS 45.0%
ACCATTTCTTTGCCCGGATA+AGG + chr7_4:59752539-59752558 None:intergenic 45.0%
GCTGAAACCATTTCTTTGCC+CGG + chr7_4:59752545-59752564 None:intergenic 45.0%
! AGCACCGAAGTCTGTGAATT+TGG - chr7_4:59752591-59752610 Msa1167320:CDS 45.0%
GCAGTGCAATGTCAAAGAAC+TGG - chr7_4:59752632-59752651 Msa1167320:CDS 45.0%
CTGGAAAAATTCGGAGGAAG+AGG - chr7_4:59752651-59752670 Msa1167320:CDS 45.0%
GATGGCCGATGAAGACAATT+TGG - chr7_4:59752753-59752772 Msa1167320:CDS 45.0%
TAATCAAGACCCATTCACCC+TGG - chr7_4:59752971-59752990 Msa1167320:intron 45.0%
CTATCACAATAGGGTGGGAA+AGG - chr7_4:59753211-59753230 Msa1167320:intron 45.0%
GTAAGACAGAACTGTGACCA+AGG - chr7_4:59753271-59753290 Msa1167320:intron 45.0%
TCTATGCATGACTCTTTCCG+TGG - chr7_4:59753330-59753349 Msa1167320:intron 45.0%
CTATGCATGACTCTTTCCGT+GGG - chr7_4:59753331-59753350 Msa1167320:intron 45.0%
AACTTGGCATAAGATACCCC+AGG - chr7_4:59753444-59753463 Msa1167320:intron 45.0%
GGTGTAATTGTAGAGTCCTG+GGG + chr7_4:59753463-59753482 None:intergenic 45.0%
! CAATTGGGTGTGTGATTTGG+AGG + chr7_4:59753658-59753677 None:intergenic 45.0%
CTCCAAATCACACACCCAAT+TGG - chr7_4:59753656-59753675 Msa1167320:intron 45.0%
CACACACCCAATTGGAACAA+AGG - chr7_4:59753664-59753683 Msa1167320:intron 45.0%
AACAACTACCATCATCTGGG+GGG - chr7_4:59753714-59753733 Msa1167320:intron 45.0%
!! GGGGGCATTCATCATTATCA+TGG - chr7_4:59753732-59753751 Msa1167320:intron 45.0%
GAATGCTTGGGTAAGCCATT+AGG + chr7_4:59753830-59753849 None:intergenic 45.0%
ATTCAAATTCTTCGGCTGCG+AGG - chr7_4:59753846-59753865 Msa1167320:CDS 45.0%
! TTGCTGCTGTCCCGTAATTT+TGG + chr7_4:59753915-59753934 None:intergenic 45.0%
!! AGGTGAAGACTGTTCTGAAG+GGG + chr7_4:59753960-59753979 None:intergenic 45.0%
CGTATTGTTACTGGCACTGT+TGG + chr7_4:59753998-59754017 None:intergenic 45.0%
CCAAATTACGCATCGAAGGA+GGG + chr7_4:59754024-59754043 None:intergenic 45.0%
TCAGCCAAATTACGCATCGA+AGG + chr7_4:59754028-59754047 None:intergenic 45.0%
TGAACATTGGAACGAATGGC+AGG + chr7_4:59754127-59754146 None:intergenic 45.0%
TGCCATTCGTTCCAATGTTC+AGG - chr7_4:59754126-59754145 Msa1167320:intron 45.0%
TCACAAGAGAAGGATATGCG+GGG - chr7_4:59754166-59754185 Msa1167320:intron 45.0%
GAAATTAATGTGGTCGGGGA+AGG + chr7_4:59754463-59754482 None:intergenic 45.0%
ATTTGGAGAACCTAGTGACG+CGG + chr7_4:59754500-59754519 None:intergenic 45.0%
GAAGGCTGGAAAGAAGCAAA+AGG - chr7_4:59754555-59754574 Msa1167320:intron 45.0%
CGATTGTTGGAGGAAGTAGA+TGG + chr7_4:59754592-59754611 None:intergenic 45.0%
TCTACTTCCTCCAACAATCG+CGG - chr7_4:59754592-59754611 Msa1167320:intron 45.0%
AACTACAGTGCCAAGTGAGA+CGG - chr7_4:59754726-59754745 Msa1167320:intron 45.0%
GAAACAGGAACTGAAGCAAC+TGG + chr7_4:59754802-59754821 None:intergenic 45.0%
AGCATCATCTGCCTCAATTC+TGG + chr7_4:59754848-59754867 None:intergenic 45.0%
GATGAACTCCCACATCATTG+CGG - chr7_4:59754988-59755007 Msa1167320:intron 45.0%
CACAATCACCGCAATGATGT+GGG + chr7_4:59754999-59755018 None:intergenic 45.0%
GGTATGCAACATCAGATGAC+TGG - chr7_4:59755118-59755137 Msa1167320:intron 45.0%
ACATCAGATGACTGGATTGC+TGG - chr7_4:59755126-59755145 Msa1167320:intron 45.0%
TCTCGCTATCTGGATTGTTC+AGG + chr7_4:59755347-59755366 None:intergenic 45.0%
GAACAATCCAGATAGCGAGA+TGG - chr7_4:59755347-59755366 Msa1167320:intron 45.0%
CTACTTTCCATCTCGCTATC+TGG + chr7_4:59755357-59755376 None:intergenic 45.0%
ATTGGACCTGCTCTTTATGC+AGG - chr7_4:59755542-59755561 Msa1167320:CDS 45.0%
CATGTTCCTGCATAAAGAGC+AGG + chr7_4:59755551-59755570 None:intergenic 45.0%
CTTGTATTGCATTGGAGCCA+AGG - chr7_4:59755583-59755602 Msa1167320:CDS 45.0%
TAGGAAAGCAGCTAAGGCAA+TGG + chr7_4:59755684-59755703 None:intergenic 45.0%
ACTGCTTAGGAAAGCAGCTA+AGG + chr7_4:59755690-59755709 None:intergenic 45.0%
TTTGACACCTATGGGGATAC+CGG - chr7_4:59755862-59755881 Msa1167320:five_prime_UTR 45.0%
GTAGCATAGCGCACAACATT+TGG + chr7_4:59756139-59756158 None:intergenic 45.0%
!! TATTATTATAATCAAATAAA+AGG + chr7_4:59751001-59751020 None:intergenic 5.0%
GCGATGGGCGATTACTATTG+GGG + chr7_4:59749167-59749186 None:intergenic 50.0%
CTGCGATGGGCGATTACTAT+TGG + chr7_4:59749169-59749188 None:intergenic 50.0%
GAGTAGAAGAAAGGCTGCGA+TGG + chr7_4:59749183-59749202 None:intergenic 50.0%
AATCGAGGTTTCTTCGCACC+TGG + chr7_4:59749555-59749574 None:intergenic 50.0%
GAGGTAGGTTGTTGTCGTTG+AGG + chr7_4:59749624-59749643 None:intergenic 50.0%
CAACGACAACAACCTACCTC+TGG - chr7_4:59749624-59749643 Msa1167320:three_prime_UTR 50.0%
ACGACAACAACCTACCTCTG+GGG - chr7_4:59749626-59749645 Msa1167320:three_prime_UTR 50.0%
GTTGCTACGATGTTGTCGTC+TGG - chr7_4:59749648-59749667 Msa1167320:three_prime_UTR 50.0%
CTACGATGTTGTCGTCTGGT+AGG - chr7_4:59749652-59749671 Msa1167320:three_prime_UTR 50.0%
TGAGTCACCAGCTCTTGATG+CGG + chr7_4:59749744-59749763 None:intergenic 50.0%
AGAGCTGGTGACTCAGTACA+AGG - chr7_4:59749749-59749768 Msa1167320:intron 50.0%
!! TCGATTGCTGGTGCTGTTTG+TGG - chr7_4:59749858-59749877 Msa1167320:CDS 50.0%
ATCATCAGGCCAACCCAAGT+GGG + chr7_4:59750172-59750191 None:intergenic 50.0%
!! TTGGGTTGGCCTGATGATGT+TGG - chr7_4:59750174-59750193 Msa1167320:CDS 50.0%
! TTGGCCTGATGATGTTGGCT+TGG - chr7_4:59750179-59750198 Msa1167320:CDS 50.0%
!! TGGCCTGATGATGTTGGCTT+GGG - chr7_4:59750180-59750199 Msa1167320:CDS 50.0%
!! ATGATGTTGGCTTGGGACCT+TGG - chr7_4:59750187-59750206 Msa1167320:CDS 50.0%
! TTGAGGAGGAGCACAATCCA+AGG + chr7_4:59750207-59750226 None:intergenic 50.0%
TTGGATTGTGCTCCTCCTCA+AGG - chr7_4:59750206-59750225 Msa1167320:CDS 50.0%
TCAAACCAGAGACCTTGAGG+AGG + chr7_4:59750221-59750240 None:intergenic 50.0%
GATTCTCCCCAGTACCAACT+TGG - chr7_4:59750239-59750258 Msa1167320:CDS 50.0%
!! AGCCTACCCAAGTTGGTACT+GGG + chr7_4:59750249-59750268 None:intergenic 50.0%
!! TAGCCTACCCAAGTTGGTAC+TGG + chr7_4:59750250-59750269 None:intergenic 50.0%
TAGGTACCAGGTTTGGGTAC+TGG - chr7_4:59750451-59750470 Msa1167320:CDS 50.0%
GTGGTGCTCTATCATTCTCC+TGG - chr7_4:59750526-59750545 Msa1167320:CDS 50.0%
GGTGTTCGTGTGTATGACGT+GGG - chr7_4:59750609-59750628 Msa1167320:CDS 50.0%
GTGTTCGTGTGTATGACGTG+GGG - chr7_4:59750610-59750629 Msa1167320:CDS 50.0%
! GCTTTTGGTCACTTGGAACC+TGG + chr7_4:59750852-59750871 None:intergenic 50.0%
! GAAGGCAGCTTTTGGTCACT+TGG + chr7_4:59750859-59750878 None:intergenic 50.0%
GGAACTCAACTTCAATCCCG+CGG - chr7_4:59751380-59751399 Msa1167320:CDS 50.0%
AACTTCAATCCCGCGGTCAA+TGG - chr7_4:59751387-59751406 Msa1167320:CDS 50.0%
AGAAGCTGAACCATTGACCG+CGG + chr7_4:59751400-59751419 None:intergenic 50.0%
TTAAGCCTAGGATCCAGCCA+TGG + chr7_4:59752266-59752285 None:intergenic 50.0%
!! GTTCCTGAAAAGAGCATCGG+CGG - chr7_4:59752415-59752434 Msa1167320:intron 50.0%
!! GGTTCAGGTGTTGGAAGAAC+CGG - chr7_4:59752484-59752503 Msa1167320:intron 50.0%
GTGTTGGAAGAACCGGAAGT+AGG - chr7_4:59752491-59752510 Msa1167320:intron 50.0%
AGAACCGGAAGTAGGCTCAT+TGG - chr7_4:59752499-59752518 Msa1167320:CDS 50.0%
! GGTGTTGCAGAGACCTTATC+CGG - chr7_4:59752523-59752542 Msa1167320:CDS 50.0%
GTGTTGCAGAGACCTTATCC+GGG - chr7_4:59752524-59752543 Msa1167320:CDS 50.0%
GGAGGAAGAGGAGTTCATGT+GGG - chr7_4:59752663-59752682 Msa1167320:CDS 50.0%
AGAGGAGTTCATGTGGGATG+AGG - chr7_4:59752669-59752688 Msa1167320:CDS 50.0%
ACAACTTGAGCTCAGACCCA+TGG - chr7_4:59752731-59752750 Msa1167320:CDS 50.0%
TGTCTTCATCGGCCATCCAT+GGG + chr7_4:59752750-59752769 None:intergenic 50.0%
TTGTCTTCATCGGCCATCCA+TGG + chr7_4:59752751-59752770 None:intergenic 50.0%
CAAAACCAGCCAGGGTGAAT+GGG + chr7_4:59752983-59753002 None:intergenic 50.0%
TCAAAACCAGCCAGGGTGAA+TGG + chr7_4:59752984-59753003 None:intergenic 50.0%
ATCATGGGAGTTGCAGAAGC+AGG - chr7_4:59753748-59753767 Msa1167320:CDS 50.0%
GTTGGAGACTGTTGTCGCAA+AGG + chr7_4:59753980-59753999 None:intergenic 50.0%
GGAGGGTTGCGTATTGTTAC+TGG + chr7_4:59754007-59754026 None:intergenic 50.0%
CCCTCCTTCGATGCGTAATT+TGG - chr7_4:59754021-59754040 Msa1167320:intron 50.0%
GCCAAATTACGCATCGAAGG+AGG + chr7_4:59754025-59754044 None:intergenic 50.0%
ATTGGAACGAATGGCAGGCA+CGG + chr7_4:59754122-59754141 None:intergenic 50.0%
! AGCTGCTGTTGCTGAGGTTT+TGG + chr7_4:59754220-59754239 None:intergenic 50.0%
AAAACCTCAGCAACAGCAGC+TGG - chr7_4:59754219-59754238 Msa1167320:intron 50.0%
AAACCTCAGCAACAGCAGCT+GGG - chr7_4:59754220-59754239 Msa1167320:intron 50.0%
TTTAAGCCTACTCGGTCAGG+TGG - chr7_4:59754436-59754455 Msa1167320:intron 50.0%
!!! TGCGGTAGTTTTGGCAGAGT+AGG + chr7_4:59754532-59754551 None:intergenic 50.0%
ACTCTGCCAAAACTACCGCA+AGG - chr7_4:59754532-59754551 Msa1167320:intron 50.0%
CTCTGCCAAAACTACCGCAA+GGG - chr7_4:59754533-59754552 Msa1167320:intron 50.0%
TTCTTTCCAGCCTTCCCTTG+CGG + chr7_4:59754550-59754569 None:intergenic 50.0%
GCGAAAGGTTTGATATCCGC+AGG - chr7_4:59754691-59754710 Msa1167320:intron 50.0%
!! AGTTGCTGACTCTGTTCCTG+CGG + chr7_4:59754710-59754729 None:intergenic 50.0%
ACTGGGACAGCTGAAGAAAC+AGG + chr7_4:59754817-59754836 None:intergenic 50.0%
TGAGGCAGATGATGCTGCAA+AGG - chr7_4:59754852-59754871 Msa1167320:intron 50.0%
TGATTGAGACAAGGCAAGCG+AGG + chr7_4:59754878-59754897 None:intergenic 50.0%
CCACAATCACCGCAATGATG+TGG + chr7_4:59755000-59755019 None:intergenic 50.0%
CCACATCATTGCGGTGATTG+TGG - chr7_4:59754997-59755016 Msa1167320:intron 50.0%
AGATGACTGGATTGCTGGCA+AGG - chr7_4:59755131-59755150 Msa1167320:intron 50.0%
CGGGAGTCAATTGGACACTA+TGG - chr7_4:59755218-59755237 Msa1167320:intron 50.0%
AAGGGACGAGTGGATGTTCA+AGG - chr7_4:59755311-59755330 Msa1167320:intron 50.0%
AGGGACGAGTGGATGTTCAA+GGG - chr7_4:59755312-59755331 Msa1167320:intron 50.0%
GGGTACCCTTGATAAGCTTC+TGG + chr7_4:59755614-59755633 None:intergenic 50.0%
!! GAAGCTTATCAAGGGTACCC+AGG - chr7_4:59755614-59755633 Msa1167320:CDS 50.0%
TTGACACCTATGGGGATACC+GGG - chr7_4:59755863-59755882 Msa1167320:five_prime_UTR 50.0%
GGTCATCTTCATCCAAACGG+CGG - chr7_4:59755907-59755926 Msa1167320:five_prime_UTR 50.0%
AGAGAGAGAGAGAGAGGGAG+AGG + chr7_4:59749230-59749249 None:intergenic 55.0%
ATCGTAGCAACCCCAGAGGT+AGG + chr7_4:59749639-59749658 None:intergenic 55.0%
CAACATCGTAGCAACCCCAG+AGG + chr7_4:59749643-59749662 None:intergenic 55.0%
!! GAAAGTAGTGATGGTGGCGG+TGG - chr7_4:59749699-59749718 Msa1167320:intron 55.0%
TCTGCGGCGAAATCGATTGC+TGG - chr7_4:59749846-59749865 Msa1167320:CDS 55.0%
CATCATCAGGCCAACCCAAG+TGG + chr7_4:59750173-59750192 None:intergenic 55.0%
GGTCCCAAGCCAACATCATC+AGG + chr7_4:59750186-59750205 None:intergenic 55.0%
TCCCCAGTACCAACTTGGGT+AGG - chr7_4:59750244-59750263 Msa1167320:CDS 55.0%
!! GCCTACCCAAGTTGGTACTG+GGG + chr7_4:59750248-59750267 None:intergenic 55.0%
! GTACTGGCCCGGTATCCTAA+TGG - chr7_4:59750467-59750486 Msa1167320:CDS 55.0%
GGGTGTTCGTGTGTATGACG+TGG - chr7_4:59750608-59750627 Msa1167320:CDS 55.0%
! CTTTGCTGTCAGACTACCCG+AGG - chr7_4:59750933-59750952 Msa1167320:CDS 55.0%
GAAGCTGAACCATTGACCGC+GGG + chr7_4:59751399-59751418 None:intergenic 55.0%
AACGTCTTCAGCAGTCCAGC+AGG - chr7_4:59751502-59751521 Msa1167320:CDS 55.0%
ACGTCTTCAGCAGTCCAGCA+GGG - chr7_4:59751503-59751522 Msa1167320:CDS 55.0%
AGAGAGGCCAGATCGAGCTT+TGG - chr7_4:59752229-59752248 Msa1167320:intron 55.0%
GAGAGGCCAGATCGAGCTTT+GGG - chr7_4:59752230-59752249 Msa1167320:intron 55.0%
ACCGGAAGTAGGCTCATTGG+CGG - chr7_4:59752502-59752521 Msa1167320:CDS 55.0%
ACCGCCAATGAGCCTACTTC+CGG + chr7_4:59752506-59752525 None:intergenic 55.0%
CGGAGGAAGAGGAGTTCATG+TGG - chr7_4:59752662-59752681 Msa1167320:CDS 55.0%
ATGTGGGATGAGGTGAACCC+TGG - chr7_4:59752679-59752698 Msa1167320:CDS 55.0%
CTTGAGCTCAGACCCATGGA+TGG - chr7_4:59752735-59752754 Msa1167320:CDS 55.0%
GATGAATGCCCCCCAGATGA+TGG + chr7_4:59753725-59753744 None:intergenic 55.0%
TTGGAACGAATGGCAGGCAC+GGG + chr7_4:59754121-59754140 None:intergenic 55.0%
ACAGCAGCTGGGTTCTTCAC+AGG - chr7_4:59754231-59754250 Msa1167320:intron 55.0%
CCACTCTTCACAGATGGAGC+TGG + chr7_4:59754352-59754371 None:intergenic 55.0%
CCAGCTCCATCTGTGAAGAG+TGG - chr7_4:59754349-59754368 Msa1167320:CDS 55.0%
GGGTTTAAGCCTACTCGGTC+AGG - chr7_4:59754433-59754452 Msa1167320:intron 55.0%
GCCAAAACTACCGCAAGGGA+AGG - chr7_4:59754537-59754556 Msa1167320:intron 55.0%
! GCCTTCCCTTGCGGTAGTTT+TGG + chr7_4:59754541-59754560 None:intergenic 55.0%
AAACTACCGCAAGGGAAGGC+TGG - chr7_4:59754541-59754560 Msa1167320:intron 55.0%
TGATGCACCGCGATTGTTGG+AGG + chr7_4:59754602-59754621 None:intergenic 55.0%
AGCTGATGCACCGCGATTGT+TGG + chr7_4:59754605-59754624 None:intergenic 55.0%
GATCGCATCACCGTCTCACT+TGG + chr7_4:59754739-59754758 None:intergenic 55.0%
ACTGTCAGGAAAGGGACGAG+TGG - chr7_4:59755301-59755320 Msa1167320:intron 55.0%
GGGACGAGTGGATGTTCAAG+GGG - chr7_4:59755313-59755332 Msa1167320:intron 55.0%
GGACGAGTGGATGTTCAAGG+GGG - chr7_4:59755314-59755333 Msa1167320:intron 55.0%
! TGGGGCGGATTTGACACCTA+TGG - chr7_4:59755853-59755872 Msa1167320:five_prime_UTR 55.0%
! GGGGCGGATTTGACACCTAT+GGG - chr7_4:59755854-59755873 Msa1167320:five_prime_UTR 55.0%
! GGGCGGATTTGACACCTATG+GGG - chr7_4:59755855-59755874 Msa1167320:five_prime_UTR 55.0%
TGACACCTATGGGGATACCG+GGG - chr7_4:59755864-59755883 Msa1167320:five_prime_UTR 55.0%
CTTGATGCGGCGGTGGTTGA+GGG + chr7_4:59749731-59749750 None:intergenic 60.0%
TCTTGATGCGGCGGTGGTTG+AGG + chr7_4:59749732-59749751 None:intergenic 60.0%
GTCACCAGCTCTTGATGCGG+CGG + chr7_4:59749741-59749760 None:intergenic 60.0%
GTGCTCCTCCTCAAGGTCTC+TGG - chr7_4:59750213-59750232 Msa1167320:CDS 60.0%
!! ACCAGGTTTGGGTACTGGCC+CGG - chr7_4:59750456-59750475 Msa1167320:CDS 60.0%
CTTCAGCAGTCCAGCAGGGT+AGG - chr7_4:59751507-59751526 Msa1167320:CDS 60.0%
GCAGCACCCAAAGCTCGATC+TGG + chr7_4:59752239-59752258 None:intergenic 60.0%
! CTTTGGGTGCTGCACGTCCA+TGG - chr7_4:59752246-59752265 Msa1167320:intron 60.0%
CACGTCCATGGCTGGATCCT+AGG - chr7_4:59752258-59752277 Msa1167320:intron 60.0%
! GCTCCGCCGATGCTCTTTTC+AGG + chr7_4:59752421-59752440 None:intergenic 60.0%
!! AAGAGCATCGGCGGAGCCTA+TGG - chr7_4:59752424-59752443 Msa1167320:intron 60.0%
CAAGACCCATTCACCCTGGC+TGG - chr7_4:59752975-59752994 Msa1167320:intron 60.0%
GAACCCAGCTGCTGTTGCTG+AGG + chr7_4:59754226-59754245 None:intergenic 60.0%
GAAGGACCACCTGACCGAGT+AGG + chr7_4:59754445-59754464 None:intergenic 60.0%
TGGAGAACCTAGTGACGCGG+CGG + chr7_4:59754497-59754516 None:intergenic 60.0%
GACACCTATGGGGATACCGG+GGG - chr7_4:59755865-59755884 Msa1167320:five_prime_UTR 60.0%
ACACCTATGGGGATACCGGG+GGG - chr7_4:59755866-59755885 Msa1167320:five_prime_UTR 60.0%
ACCACCGCCGCATCAAGAGC+TGG - chr7_4:59749734-59749753 Msa1167320:intron 65.0%
ACCAGCTCTTGATGCGGCGG+TGG + chr7_4:59749738-59749757 None:intergenic 65.0%
ACCGGGCCAGTACCCAAACC+TGG + chr7_4:59750460-59750479 None:intergenic 65.0%
GGCGGAGCCTATGGAGACGA+TGG - chr7_4:59752433-59752452 Msa1167320:intron 65.0%
GGAGAACCTAGTGACGCGGC+GGG + chr7_4:59754496-59754515 None:intergenic 65.0%
CACCTATGGGGATACCGGGG+GGG - chr7_4:59755867-59755886 Msa1167320:five_prime_UTR 65.0%
ACCTATGGGGATACCGGGGG+GGG - chr7_4:59755868-59755887 Msa1167320:five_prime_UTR 65.0%
GATGCGGCGGTGGTTGAGGG+TGG + chr7_4:59749728-59749747 None:intergenic 70.0%
! GGGTGCTGCACGTCCATGGC+TGG - chr7_4:59752250-59752269 Msa1167320:intron 70.0%
CCTATGGGGATACCGGGGGG+GGG - chr7_4:59755869-59755888 Msa1167320:five_prime_UTR 70.0%
CTATGGGGATACCGGGGGGG+GGG - chr7_4:59755870-59755889 Msa1167320:five_prime_UTR 70.0%
TATGGGGATACCGGGGGGGG+GGG - chr7_4:59755871-59755890 Msa1167320:five_prime_UTR 70.0%
GGGGGGGGGGTAACACAGCA+AGG - chr7_4:59755886-59755905 Msa1167320:five_prime_UTR 70.0%
GGGTCTCCCGCCGCGTCACT+AGG - chr7_4:59754487-59754506 Msa1167320:intron 75.0%
CCCCCCCCCGGTATCCCCAT+AGG + chr7_4:59755872-59755891 None:intergenic 75.0%
ATGGGGATACCGGGGGGGGG+GGG - chr7_4:59755872-59755891 Msa1167320:five_prime_UTR 75.0%
CTGTGTTACCCCCCCCCCCC+CGG + chr7_4:59755884-59755903 None:intergenic 75.0%
! TGGGGATACCGGGGGGGGGG+GGG - chr7_4:59755873-59755892 Msa1167320:five_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59749109 59756160 59749109 ID=Msa1167320;Name=Msa1167320
chr7_4 mRNA 59749109 59756160 59749109 ID=Msa1167320-mRNA-1;Parent=Msa1167320;Name=Msa1167320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=398|1|1|1|1|1|7|585|1026
chr7_4 exon 59749109 59749705 59749109 ID=Msa1167320-mRNA-1:exon:18554;Parent=Msa1167320-mRNA-1
chr7_4 exon 59749826 59751628 59749826 ID=Msa1167320-mRNA-1:exon:18553;Parent=Msa1167320-mRNA-1
chr7_4 exon 59752495 59752893 59752495 ID=Msa1167320-mRNA-1:exon:18552;Parent=Msa1167320-mRNA-1
chr7_4 exon 59752977 59753096 59752977 ID=Msa1167320-mRNA-1:exon:18551;Parent=Msa1167320-mRNA-1
chr7_4 exon 59753745 59754002 59753745 ID=Msa1167320-mRNA-1:exon:18550;Parent=Msa1167320-mRNA-1
chr7_4 exon 59754315 59754416 59754315 ID=Msa1167320-mRNA-1:exon:18549;Parent=Msa1167320-mRNA-1
chr7_4 exon 59755376 59756160 59755376 ID=Msa1167320-mRNA-1:exon:18548;Parent=Msa1167320-mRNA-1
chr7_4 five_prime_UTR 59755763 59756160 59755763 ID=Msa1167320-mRNA-1:five_prime_utr;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59755376 59755762 59755376 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59754315 59754416 59754315 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59753745 59754002 59753745 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59752977 59753096 59752977 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59752495 59752893 59752495 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59749826 59751628 59749826 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 CDS 59749694 59749705 59749694 ID=Msa1167320-mRNA-1:cds;Parent=Msa1167320-mRNA-1
chr7_4 three_prime_UTR 59749109 59749693 59749109 ID=Msa1167320-mRNA-1:three_prime_utr;Parent=Msa1167320-mRNA-1
Gene Sequence

>Msa1167320

ATGAACATGGAAAATTCTCGTAGATCTTTAGATAGATCGAGAGAACCAGGTGCGAAGAAACCTCGATTGATCGATGAGCTACAACAAGGTTCCAATCCAACTTCACGAACGTTTCCTCAACGACAACAACCTACCTCTGGGGTTGCTACGATGTTGTCGTCTGGTAGGTTTCGAATGAATGATAGAGACTCTGAAAGTAGTGATGGTGGCGGTGGTTACCACCCTCAACCACCGCCGCATCAAGAGCTGGTGACTCAGTACAAGGCTGCTCTTGCTGAGCTTACTTTTAACTCGAAACCGATAATTACTAATTTGACTATAATTGCTGGAGAGAATCTTTCTGCGGCGAAATCGATTGCTGGTGCTGTTTGTGGTAACATTCTTGAGGTTCCAAGTGACCAAAAGCTGCCTTCGCTTTATCTCTTAGACAGTATTGTTAAGAATATTGGGCGGGATTACATAAAATACTTTGCTGTCAGACTACCCGAGGTATTCTGCAATACATACAGACAGGTTGATACTCCTGTCCATTCAAGTATGAGGCATCTTTTTGGAACTTGGAGAGGAGTCTTTCCTCCTCAGACTCTTCAGATAATTGAGAAGGAACTCAACTTCAATCCCGCGGTCAATGGTTCAGCTTCTGCATCTGCTACCCTTAGAAGTGATTCTCAGTCTCAACGCCCATCTCATAGCATCCATGTGAATCCCAAATATTTAGAAAGGCAACGTCTTCAGCAGTCCAGCAGGACTAAAGGAGTATTTGATGATATGGCTGGAGTTATTTCAAATGCAAATGAAGACGCAGAGAGGCCAGATCGAGCTTTGGGTGCTGCACGTCCATGGCTGGATCCTAGGCTTAACATGCATAATAATCAGCATACTCATAGAGGTGCACTTAATGACTCTGTTCCTGAAAAGAGCATCGGCGGAGCCTATGGAGACGATGGATATAATTCTAGTGTTTCAAATAGTTTGGGTTCAGGTGTTGGAAGAACCGGAAGTAGGCTCATTGGCGGTGTTGCAGAGACCTTATCCGGGCAAAGAAATGGTTTCAGCCTCAAACATAGTTTTTCAAATCATGAAGCACCGAAGTCTGTGAATTTGGATGCACATAGCATAAGGAGCAGTGCAATGTCAAAGAACTGGAAAAATTCGGAGGAAGAGGAGTTCATGTGGGATGAGGTGAACCCTGGTTTGTCTGATAATGTACCTAATGTCTCTAACAACTTGAGCTCAGACCCATGGATGGCCGATGAAGACAATTTGGAAAGTGAAGATCACCTCCAAATCACACACCCAATTGGAACAAAGGTTAATAAAGGAATATCCACTGTTAAGAAACAACTACCATCATCTGGGGGGCATTCATCATTATCATGGGAGTTGCAGAAGCAGGTCCCAAGTGCCAAATTGAATATGAAGCCAGGTCACTCAGAAATATTTGTTTCTGCTCCTAATGGCTTACCCAAGCATTCAAATTCTTCGGCTGCGAGGATAAGAAATCAGTCTTCTATGCCGCATACAACAATAGGAATGTCCAAAATTACGGGACAGCAGCAATTTGATTCTGAGGGGACAGAGTCCCCTTCAGAACAGTCTTCACCTTTGCGACAACAGTCTCCAACAGTGCCAGTAACAATACGCAACCCTCCTTCGATGCGTAATTTGGCTGAGCAAGATTGTCCAACATCTCTTAAAACATCTCAACATTTGGGTGGTCTGCAAAGACAATATATTAGAGATCCCGTGCCTGCCATTCGTTCCAATGTTCAGGTTGGTAACTTGCGAAAATCACAAGAGAAGGATATGCGGGGTCCGTTATCTTTAGCAACTTCTTTTCAGCCAAAACCTCAGCAACAGCAGCTGGGTTCTTCACAGGCTGAAGTTACTCTTAAAGCTAAGCAGCCACTCAAATCTAAAGCTCCTTTAGTCAAAGCCAAAGTGACTTCAGAAAAGTCAACTACAAAGTGTCTTCCAGCTCCATCTGTGAAGAGTGGAATCATTCCCAATAAATCAATTACGAGAAGTCTGGATGCAAGTAACTGTCCATCTCAAATAGGGTTTAAGCCTACTCGGTCAGGTGGTCCTTCCCCGACCACATTAATTTCTTCGGGGTCTCCCGCCGCGTCACTAGGTTCTCCAAATGATTATTCACCTACTCTGCCAAAACTACCGCAAGGGAAGGCTGGAAAGAAGCAAAAGGATTCTACTCAACCATCTACTTCCTCCAACAATCGCGGTGCATCAGCTCCGAGCTCAAATACCGCCAATAAGAATACCTTGAATCCAATTTCAAATCTTTTAAGCTCGTTAGTTGCGAAAGGTTTGATATCCGCAGGAACAGAGTCAGCAACTACAGTGCCAAGTGAGACGGTGATGCGATCGAAAGACCAAACTGAAAGCATTGCTGTCAGTTCCTCTTTACCAGTTGCTTCAGTTCCTGTTTCTTCAGCTGTCCCAGTAAAATCTTCCAGAATTGAGGCAGATGATGCTGCAAAGGCCTCGCTTGCCTTGTCTCAATCAACTAGCACAGAAATTAGAAATCTCATTGGCTTTGATTTCAAACCTGATGTCATTCGAGAAATGCACCCACATGTAATCGAAGAATTATTGGATGAACTCCCACATCATTGCGGTGATTGTGGTATTAGGCTTAAACAACAAGAACAGTTTAATAGACACTTGGAATGGCATGCTACAAAAGAAAGAGAACAAAATGGTCTGATTGTAGCATCAAGAAGATGGTATGCAACATCAGATGACTGGATTGCTGGCAAGGCAGAATGTCTGTCTGAGTCTGAGTTTACTGATTCTGTAGATGAATATGATGATAATAAAACAGACGGGAGTCAATTGGACACTATGGTTGTAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTATACTGTCAGGAAAGGGACGAGTGGATGTTCAAGGGGGCTGTATACCTGAACAATCCAGATAGCGAGATGGAAAGTAGAAATGTGGGGCCCATCATTCATGCTAGATGCTTGTCAGATAACTCAATACTTGGTGTGACTAATACAGAACATGATTGA
Protein sequence

>Msa1167320

MNMENSRRSLDRSREPGAKKPRLIDELQQGSNPTSRTFPQRQQPTSGVATMLSSGRFRMNDRDSESSDGGGGYHPQPPPHQELVTQYKAALAELTFNSKPIITNLTIIAGENLSAAKSIAGAVCGNILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCNTYRQVDTPVHSSMRHLFGTWRGVFPPQTLQIIEKELNFNPAVNGSASASATLRSDSQSQRPSHSIHVNPKYLERQRLQQSSRTKGVFDDMAGVISNANEDAERPDRALGAARPWLDPRLNMHNNQHTHRGALNDSVPEKSIGGAYGDDGYNSSVSNSLGSGVGRTGSRLIGGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHSIRSSAMSKNWKNSEEEEFMWDEVNPGLSDNVPNVSNNLSSDPWMADEDNLESEDHLQITHPIGTKVNKGISTVKKQLPSSGGHSSLSWELQKQVPSAKLNMKPGHSEIFVSAPNGLPKHSNSSAARIRNQSSMPHTTIGMSKITGQQQFDSEGTESPSEQSSPLRQQSPTVPVTIRNPPSMRNLAEQDCPTSLKTSQHLGGLQRQYIRDPVPAIRSNVQVGNLRKSQEKDMRGPLSLATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCLPAPSVKSGIIPNKSITRSLDASNCPSQIGFKPTRSGGPSPTTLISSGSPAASLGSPNDYSPTLPKLPQGKAGKKQKDSTQPSTSSNNRGASAPSSNTANKNTLNPISNLLSSLVAKGLISAGTESATTVPSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEADDAAKASLALSQSTSTEIRNLIGFDFKPDVIREMHPHVIEELLDELPHHCGDCGIRLKQQEQFNRHLEWHATKEREQNGLIVASRRWYATSDDWIAGKAECLSESEFTDSVDEYDDNKTDGSQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGAVYLNNPDSEMESRNVGPIIHARCLSDNSILGVTNTEHD*