AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041870 MtrunA17_Chr7g0265781 97.374 1028 25 1 1 1026 1 1028 0.0 2055
Msa1041870 MtrunA17_Chr1g0179281 54.900 1051 417 21 3 1026 1 1021 0.0 1025
Msa1041870 MtrunA17_Chr6g0452881 37.534 365 175 10 78 402 37 388 8.89e-58 214
Msa1041870 MtrunA17_Chr6g0452881 36.207 174 105 4 847 1016 645 816 2.16e-30 129
Msa1041870 MtrunA17_Chr4g0037071 33.908 174 109 4 847 1016 15 186 2.41e-26 108
Msa1041870 MtrunA17_Chr6g0452891 34.118 170 79 7 853 1013 72 217 4.11e-22 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041870 AT2G36480.2 50.000 458 187 12 3 428 1 448 1.07e-119 390
Msa1041870 AT2G36480.2 40.574 244 134 4 774 1017 716 948 8.35e-47 182
Msa1041870 AT2G36480.1 50.000 458 187 12 3 428 1 448 1.07e-119 390
Msa1041870 AT2G36480.1 40.574 244 134 4 774 1017 716 948 8.35e-47 182
Msa1041870 AT4G04885.1 37.500 400 185 13 21 399 9 364 5.86e-57 212
Msa1041870 AT4G04885.1 38.012 171 90 5 850 1011 625 788 7.01e-32 134
Msa1041870 AT1G66500.1 32.558 172 96 6 850 1012 227 387 4.51e-22 100
Msa1041870 AT5G43620.1 32.386 176 92 6 850 1012 220 381 1.00e-21 99.8

Find 324 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTGCCTTTCTAAATATT+TGG 0.133248 7_1:-79540974 None:intergenic
ACTTCTCGTAATTGATTTAT+TGG 0.142148 7_1:-79543870 None:intergenic
TTGCTGCTGTCCCGTAATTT+TGG 0.160595 7_1:-79543402 None:intergenic
GACAGTATTGTTAAGAATAT+TGG 0.166316 7_1:+79540382 Msa1041870:CDS
AGCTGCTGTTGCTGAGGTTT+TGG 0.194493 7_1:-79543707 None:intergenic
TGTCAAATCTACACATTCTT+TGG 0.195787 7_1:+79545477 Msa1041870:three_prime_UTR
TGGATTCAAGGTATTCTTAT+TGG 0.211269 7_1:-79544131 None:intergenic
CTAATTCTAACACTAAAATT+TGG 0.212454 7_1:-79538954 None:intergenic
CCCTCCTTCGATGCGTAATT+TGG 0.215915 7_1:+79543511 Msa1041870:CDS
ACCTGGCTTCATATTCAATT+TGG 0.235053 7_1:-79543270 None:intergenic
TTTATGCAGCTGATAAATTA+AGG 0.237610 7_1:-79545555 None:intergenic
ACATGTAATCGAAGAATTAT+TGG 0.248282 7_1:+79544456 Msa1041870:CDS
TTCTAGTGTTTCAAATAGTT+TGG 0.249454 7_1:+79541952 Msa1041870:CDS
GAGCTTAAAAGATTTGAAAT+TGG 0.266321 7_1:-79544151 None:intergenic
TCTTAAAACATCTCAACATT+TGG 0.272228 7_1:+79543556 Msa1041870:CDS
TTATTAACCTTTGTTCCAAT+TGG 0.272469 7_1:-79543161 None:intergenic
CCCGACCACATTAATTTCTT+CGG 0.274359 7_1:+79543955 Msa1041870:CDS
CTACTTTCCATCTCGCTATC+TGG 0.283979 7_1:-79544844 None:intergenic
AGTAACTGTCCATCTCAAAT+AGG 0.286697 7_1:+79543902 Msa1041870:CDS
CGTTGCCTTTCTAAATATTT+GGG 0.287620 7_1:-79540973 None:intergenic
CCGACCACATTAATTTCTTC+GGG 0.290620 7_1:+79543956 Msa1041870:CDS
TGCCATTCGTTCCAATGTTC+AGG 0.291207 7_1:+79543616 Msa1041870:CDS
ATCAATATGAATTGGGGATT+AGG 0.292412 7_1:+79538780 Msa1041870:five_prime_UTR
TCAATATGAATTGGGGATTA+GGG 0.294331 7_1:+79538781 Msa1041870:five_prime_UTR
GCCTTCCCTTGCGGTAGTTT+TGG 0.294785 7_1:-79544028 None:intergenic
AGCACCGAAGTCTGTGAATT+TGG 0.302197 7_1:+79542081 Msa1041870:CDS
ATAGTCAAATTAGTAATTAT+CGG 0.306134 7_1:-79539294 None:intergenic
ATTCATTCATCAATATGAAT+TGG 0.311937 7_1:+79538772 Msa1041870:five_prime_UTR
ACAGTATTGTTAAGAATATT+GGG 0.313571 7_1:+79540383 Msa1041870:CDS
GGAGGGTTGCGTATTGTTAC+TGG 0.318530 7_1:-79543494 None:intergenic
GGGTACCCTTGATAAGCTTC+TGG 0.325665 7_1:-79545101 None:intergenic
TTCATTCATCAATATGAATT+GGG 0.326097 7_1:+79538773 Msa1041870:five_prime_UTR
GAGACTGAGAATCACTTCTA+AGG 0.328918 7_1:-79540921 None:intergenic
TTCCAATTGGGTGTGTGATT+TGG 0.329546 7_1:-79543148 None:intergenic
ATTGCGGTGATTGTGGTATT+AGG 0.330585 7_1:+79544494 Msa1041870:CDS
CTTCTCGTAATTGATTTATT+GGG 0.331979 7_1:-79543869 None:intergenic
TGCGATGGGCGATTACTATT+GGG 0.334473 7_1:-79538654 None:intergenic
AATAGGAATGTCCAAAATTA+CGG 0.342563 7_1:+79543391 Msa1041870:CDS
GTCAAATCTACACATTCTTT+GGG 0.350866 7_1:+79545478 Msa1041870:three_prime_UTR
TATTAACCTTTGTTCCAATT+GGG 0.351939 7_1:-79543160 None:intergenic
TAAAGGAGTATTTGATGATA+TGG 0.354621 7_1:+79541665 Msa1041870:CDS
GATGGCCGATGAAGACAATT+TGG 0.356986 7_1:+79542243 Msa1041870:CDS
ACCATTTCTTTGCCCGGATA+AGG 0.361597 7_1:-79542026 None:intergenic
CTTGATGCGGCGGTGGTTGA+GGG 0.366523 7_1:-79539218 None:intergenic
GTTTCAAATAGTTTGGGTTC+AGG 0.366649 7_1:+79541959 Msa1041870:CDS
AAGATTTGAAATTGGATTCA+AGG 0.366649 7_1:-79544143 None:intergenic
ATATTTGTTTCTGCTCCTAA+TGG 0.366883 7_1:+79543302 Msa1041870:CDS
GATAAAGCGAAGGCAGCTTT+TGG 0.368771 7_1:-79540354 None:intergenic
GAATGCTTGGGTAAGCCATT+AGG 0.372033 7_1:-79543317 None:intergenic
ACTAATTTGACTATAATTGC+TGG 0.373637 7_1:+79539303 Msa1041870:CDS
GGTGTTGCAGAGACCTTATC+CGG 0.374381 7_1:+79542013 Msa1041870:CDS
TGAGGAAACGTTCGTGAAGT+TGG 0.376740 7_1:-79539093 None:intergenic
AGCCGAAGAATTTGAATGCT+TGG 0.380657 7_1:-79543330 None:intergenic
CTTAAAACATCTCAACATTT+GGG 0.380724 7_1:+79543557 Msa1041870:CDS
ATTGGAACAAAGGTTAATAA+AGG 0.381415 7_1:+79543164 Msa1041870:CDS
GGGTGCTGCACGTCCATGGC+TGG 0.382360 7_1:+79541740 Msa1041870:CDS
TCTTGATGCGGCGGTGGTTG+AGG 0.387175 7_1:-79539219 None:intergenic
TCTAGTGTTTCAAATAGTTT+GGG 0.389260 7_1:+79541953 Msa1041870:CDS
CAAAATTTGTTTGACTGCTT+AGG 0.389354 7_1:-79545190 None:intergenic
AGCATCATCTGCCTCAATTC+TGG 0.390784 7_1:-79544335 None:intergenic
AGCTGATGCACCGCGATTGT+TGG 0.393455 7_1:-79544092 None:intergenic
ACCCAAGCATTCAAATTCTT+CGG 0.397635 7_1:+79543328 Msa1041870:CDS
TGACAGCAATGCTTTCAGTT+TGG 0.399143 7_1:-79544255 None:intergenic
GCATAATATTATCCGCCGTT+TGG 0.399325 7_1:-79545403 None:intergenic
AAGAAACAACTACCATCATC+TGG 0.401863 7_1:+79543200 Msa1041870:CDS
TCTGCGGCGAAATCGATTGC+TGG 0.405177 7_1:+79539336 Msa1041870:CDS
GTCACTTTGGCTTTGACTAA+AGG 0.406869 7_1:-79543788 None:intergenic
GAGAGGCCAGATCGAGCTTT+GGG 0.416284 7_1:+79541720 Msa1041870:CDS
TCTATGCCGCATACAACAAT+AGG 0.416550 7_1:+79543374 Msa1041870:CDS
ATTTGCATATTTAACACCTA+TGG 0.416585 7_1:+79545351 Msa1041870:three_prime_UTR
ATTCATATTGATGAATGAAT+GGG 0.418307 7_1:-79538769 None:intergenic
AAAACCTCAGCAACAGCAGC+TGG 0.418357 7_1:+79543709 Msa1041870:CDS
ACTGGGACAGCTGAAGAAAC+AGG 0.419209 7_1:-79544304 None:intergenic
AGAGAGGCCAGATCGAGCTT+TGG 0.423688 7_1:+79541719 Msa1041870:CDS
ACAAAAGAAAGAGAACAAAA+TGG 0.424354 7_1:+79544562 Msa1041870:CDS
AATTCATATTGATGAATGAA+TGG 0.425384 7_1:-79538770 None:intergenic
TAAATCAATTACGAGAAGTC+TGG 0.426887 7_1:+79543874 Msa1041870:CDS
CAATTGGGTGTGTGATTTGG+AGG 0.427496 7_1:-79543145 None:intergenic
TAAAACAGACGGGAGTCAAT+TGG 0.428390 7_1:+79544699 Msa1041870:CDS
ATTCATAACTTGTATTGCAT+TGG 0.428430 7_1:+79545065 Msa1041870:exon
CCGAAGAAATTAATGTGGTC+GGG 0.430521 7_1:-79543955 None:intergenic
ACCTTATCCGGGCAAAGAAA+TGG 0.430710 7_1:+79542025 Msa1041870:CDS
TCTCGCTATCTGGATTGTTC+AGG 0.430835 7_1:-79544834 None:intergenic
CTCCAAATCACACACCCAAT+TGG 0.432800 7_1:+79543146 Msa1041870:CDS
TGCATTTCTCGAATGACATC+AGG 0.434562 7_1:-79544430 None:intergenic
GCCGAAGAATTTGAATGCTT+GGG 0.436198 7_1:-79543329 None:intergenic
TTCATATTCAATTTGGCACT+TGG 0.438918 7_1:-79543263 None:intergenic
GGGTTTAAGCCTACTCGGTC+AGG 0.439200 7_1:+79543923 Msa1041870:CDS
GTAACTGTCCATCTCAAATA+GGG 0.440250 7_1:+79543903 Msa1041870:CDS
CGATTGTTGGAGGAAGTAGA+TGG 0.441441 7_1:-79544079 None:intergenic
CGTTGCATACTAAAACTAGA+TGG 0.443364 7_1:+79545131 Msa1041870:three_prime_UTR
ACATCAGATGACTGGATTGC+TGG 0.443441 7_1:+79544616 Msa1041870:CDS
TTTAGTATGCAACGAGAACC+TGG 0.444406 7_1:-79545122 None:intergenic
GGTTCAGGTGTTGGAAGAAC+CGG 0.446940 7_1:+79541974 Msa1041870:CDS
AAGAGCATCGGCGGAGCCTA+TGG 0.447109 7_1:+79541914 Msa1041870:CDS
GCAGTGCAATGTCAAAGAAC+TGG 0.449666 7_1:+79542122 Msa1041870:CDS
CAACGACAACAACCTACCTC+TGG 0.451366 7_1:+79539114 Msa1041870:CDS
CACGTCCATGGCTGGATCCT+AGG 0.451919 7_1:+79541748 Msa1041870:CDS
CTTTGGGTGCTGCACGTCCA+TGG 0.452816 7_1:+79541736 Msa1041870:CDS
GCAGCACCCAAAGCTCGATC+TGG 0.453817 7_1:-79541726 None:intergenic
AGAGTAGGTGAATAATCATT+TGG 0.453893 7_1:-79544004 None:intergenic
GTAGCATAGCGCACAACATT+TGG 0.454690 7_1:-79545621 None:intergenic
CTCAAGTTGTTAGAGACATT+AGG 0.457050 7_1:-79542208 None:intergenic
AATCATTTCACCTACCCTGC+TGG 0.462666 7_1:-79541007 None:intergenic
TCGATTGCTGGTGCTGTTTG+TGG 0.463089 7_1:+79539348 Msa1041870:CDS
TTTGCATATTTAACACCTAT+GGG 0.466087 7_1:+79545352 Msa1041870:three_prime_UTR
AACGTCTTCAGCAGTCCAGC+AGG 0.469296 7_1:+79540992 Msa1041870:CDS
ACCAGCTCTTGATGCGGCGG+TGG 0.470882 7_1:-79539225 None:intergenic
AGAGGAGTTCATGTGGGATG+AGG 0.471007 7_1:+79542159 Msa1041870:CDS
CTTGTATTGCATTGGAGCCA+AGG 0.471717 7_1:+79545073 Msa1041870:three_prime_UTR
AACTTCAATCCCGCGGTCAA+TGG 0.473692 7_1:+79540877 Msa1041870:CDS
ACAGAAATTAGAAATCTCAT+TGG 0.476065 7_1:+79544394 Msa1041870:CDS
ATAAGCTTCTGGCTTAACCT+TGG 0.478038 7_1:-79545090 None:intergenic
GAGTAGAAGAAAGGCTGCGA+TGG 0.479165 7_1:-79538669 None:intergenic
CTCCTGTCCATTCAAGTATG+AGG 0.480383 7_1:+79540788 Msa1041870:CDS
ATCACAAGAGAAGGATATGC+GGG 0.481020 7_1:+79543655 Msa1041870:CDS
AATAGTTTGGGTTCAGGTGT+TGG 0.482447 7_1:+79541965 Msa1041870:CDS
AAACTACCGCAAGGGAAGGC+TGG 0.484966 7_1:+79544031 Msa1041870:CDS
TTGTCTTCATCGGCCATCCA+TGG 0.488246 7_1:-79542238 None:intergenic
ACAAAAGAAAATCAAAGGAG+TGG 0.488685 7_1:-79545457 None:intergenic
CTACGATGTTGTCGTCTGGT+AGG 0.491431 7_1:+79539142 Msa1041870:CDS
CACAACATTTGGTCAAATGT+TGG 0.491776 7_1:-79545610 None:intergenic
GAGAGGTGAAAGAGAAAAGA+GGG 0.493399 7_1:-79538699 None:intergenic
TGAATCCCAAATATTTAGAA+AGG 0.497212 7_1:+79540968 Msa1041870:CDS
GAAACAGGAACTGAAGCAAC+TGG 0.498254 7_1:-79544289 None:intergenic
AAACGTTCGTGAAGTTGGAT+TGG 0.499805 7_1:-79539088 None:intergenic
AAGGGACGAGTGGATGTTCA+AGG 0.500865 7_1:+79544801 Msa1041870:CDS
AGATGACTGGATTGCTGGCA+AGG 0.501201 7_1:+79544621 Msa1041870:CDS
AAAGATGCCTCATACTTGAA+TGG 0.503245 7_1:-79540795 None:intergenic
ACAGCAGCTGGGTTCTTCAC+AGG 0.503314 7_1:+79543721 Msa1041870:CDS
ATAGGAATGTCCAAAATTAC+GGG 0.506569 7_1:+79543392 Msa1041870:CDS
CGTATTGTTACTGGCACTGT+TGG 0.506761 7_1:-79543485 None:intergenic
CGGGAGTCAATTGGACACTA+TGG 0.507853 7_1:+79544708 Msa1041870:CDS
GCTGAAACCATTTCTTTGCC+CGG 0.508129 7_1:-79542032 None:intergenic
AAAGAAGTTGCTAAAGATAA+CGG 0.508160 7_1:-79543680 None:intergenic
AACTGAAGCAACTGGTAAAG+AGG 0.508176 7_1:-79544281 None:intergenic
CTAAATATTTGGGATTCACA+TGG 0.508383 7_1:-79540963 None:intergenic
GTTAAGCCAGAAGCTTATCA+AGG 0.511104 7_1:+79545095 Msa1041870:three_prime_UTR
AATCGAGGTTTCTTCGCACC+TGG 0.512088 7_1:-79539042 None:intergenic
GCCAAATTGAATATGAAGCC+AGG 0.515735 7_1:+79543269 Msa1041870:CDS
TCATATTCAATTTGGCACTT+GGG 0.516765 7_1:-79543262 None:intergenic
GGCTTAAACCCTATTTGAGA+TGG 0.516828 7_1:-79543911 None:intergenic
ACCGCCAATGAGCCTACTTC+CGG 0.517406 7_1:-79541993 None:intergenic
ATCATGGGAGTTGCAGAAGC+AGG 0.518761 7_1:+79543238 Msa1041870:CDS
CAAGTTACCAACCTGAACAT+TGG 0.518895 7_1:-79543627 None:intergenic
ATTTGAAGATGTATACTGTC+AGG 0.519071 7_1:+79544777 Msa1041870:CDS
TTTAACACCTATGGGGATAC+CGG 0.519663 7_1:+79545360 Msa1041870:three_prime_UTR
AGTAAAATCTTCCAGAATTG+AGG 0.520874 7_1:+79544324 Msa1041870:CDS
GGAGTATTTGATGATATGGC+TGG 0.521125 7_1:+79541669 Msa1041870:CDS
CAAAAGAAAATCAAAGGAGT+GGG 0.522899 7_1:-79545456 None:intergenic
GATCGCATCACCGTCTCACT+TGG 0.525025 7_1:-79544226 None:intergenic
TGATGCACCGCGATTGTTGG+AGG 0.525881 7_1:-79544089 None:intergenic
GAAATTAATGTGGTCGGGGA+AGG 0.526098 7_1:-79543950 None:intergenic
CCACATCATTGCGGTGATTG+TGG 0.527976 7_1:+79544487 Msa1041870:CDS
AGAACCGGAAGTAGGCTCAT+TGG 0.529221 7_1:+79541989 Msa1041870:CDS
CACACAATACACACAAGCAT+TGG 0.529437 7_1:-79544747 None:intergenic
AACGACAACAACCTACCTCT+GGG 0.529457 7_1:+79539115 Msa1041870:CDS
TGAAGATGACCTTGCTGTAC+CGG 0.530424 7_1:-79545379 None:intergenic
GCCAAATTACGCATCGAAGG+AGG 0.530494 7_1:-79543512 None:intergenic
ATTGGAACGAATGGCAGGCA+CGG 0.530926 7_1:-79543609 None:intergenic
CCCGAAGAAATTAATGTGGT+CGG 0.531341 7_1:-79543956 None:intergenic
CCACTCTTCACAGATGGAGC+TGG 0.531578 7_1:-79543839 None:intergenic
GCTTACCAAATTGTCTTCAT+CGG 0.532183 7_1:-79542248 None:intergenic
ATTCAAGGTATTCTTATTGG+CGG 0.532457 7_1:-79544128 None:intergenic
ATTTGGATGCACATAGCATA+AGG 0.533715 7_1:+79542098 Msa1041870:CDS
ACTGCTTAGGAAAGCAGCTA+AGG 0.533771 7_1:-79545177 None:intergenic
TTATTGGCGGTATTTGAGCT+CGG 0.534346 7_1:-79544115 None:intergenic
GCGAAAGGTTTGATATCCGC+AGG 0.535645 7_1:+79544181 Msa1041870:CDS
CAAGCATCTAGCATGAATGA+TGG 0.535680 7_1:-79544878 None:intergenic
GGTATGCAACATCAGATGAC+TGG 0.539121 7_1:+79544608 Msa1041870:CDS
ACCACCGCCGCATCAAGAGC+TGG 0.540585 7_1:+79539224 Msa1041870:CDS
ACAGCAGCAATTTGATTCTG+AGG 0.540664 7_1:+79543415 Msa1041870:CDS
GGAGAGGTGAAAGAGAAAAG+AGG 0.541777 7_1:-79538700 None:intergenic
AGAAACAACTACCATCATCT+GGG 0.543785 7_1:+79543201 Msa1041870:CDS
TCATTCATCAATATGAATTG+GGG 0.544901 7_1:+79538774 Msa1041870:five_prime_UTR
TTAAGCTCGTTAGTTGCGAA+AGG 0.545105 7_1:+79544166 Msa1041870:CDS
TTCACATGGATGCTATGAGA+TGG 0.547527 7_1:-79540949 None:intergenic
AATAATTCTTCGATTACATG+TGG 0.547916 7_1:-79544454 None:intergenic
TGTCTTCATCGGCCATCCAT+GGG 0.548954 7_1:-79542237 None:intergenic
GGATCGAGAGAGTAGAAGAA+AGG 0.551115 7_1:-79538678 None:intergenic
ATTATATCCATCGTCTCCAT+AGG 0.554348 7_1:-79541930 None:intergenic
CAAGGTCATCTTCATCCAAA+CGG 0.554505 7_1:+79545388 Msa1041870:three_prime_UTR
TGAACATTGGAACGAATGGC+AGG 0.555403 7_1:-79543614 None:intergenic
AATAATCAGCATACTCATAG+AGG 0.555522 7_1:+79541866 Msa1041870:CDS
AGATGTATACTGTCAGGAAA+GGG 0.555729 7_1:+79544783 Msa1041870:CDS
AGTAGAAGAAAGGCTGCGAT+GGG 0.555771 7_1:-79538668 None:intergenic
GACATTCCTATTGTTGTATG+CGG 0.557470 7_1:-79543380 None:intergenic
AAGGTGAAGACTGTTCTGAA+GGG 0.558749 7_1:-79543448 None:intergenic
AACCTGAACATTGGAACGAA+TGG 0.559123 7_1:-79543618 None:intergenic
AAAGGTGAAGACTGTTCTGA+AGG 0.560794 7_1:-79543449 None:intergenic
CAGCAGCAATTTGATTCTGA+GGG 0.562116 7_1:+79543416 Msa1041870:CDS
TATGATGATAATAAAACAGA+CGG 0.562220 7_1:+79544688 Msa1041870:CDS
CCAAATTACGCATCGAAGGA+GGG 0.563230 7_1:-79543511 None:intergenic
ATGATTCCACTCTTCACAGA+TGG 0.563534 7_1:-79543845 None:intergenic
TTGGAACGAATGGCAGGCAC+GGG 0.563880 7_1:-79543608 None:intergenic
TGATTGTAGCATCAAGAAGA+TGG 0.565765 7_1:+79544587 Msa1041870:CDS
TGCCTCATACTTGAATGGAC+AGG 0.566930 7_1:-79540790 None:intergenic
TCCGCTTATTGATTCTTGTG+CGG 0.567413 7_1:-79538889 None:intergenic
GTTGCTACGATGTTGTCGTC+TGG 0.567550 7_1:+79539138 Msa1041870:CDS
CACACACCCAATTGGAACAA+AGG 0.567583 7_1:+79543154 Msa1041870:CDS
TATTGTTAAGAATATTGGGC+GGG 0.568077 7_1:+79540387 Msa1041870:CDS
CCACAATCACCGCAATGATG+TGG 0.571121 7_1:-79544487 None:intergenic
CGAAGAAATTAATGTGGTCG+GGG 0.572323 7_1:-79543954 None:intergenic
ATTCGTTCCAATGTTCAGGT+TGG 0.573224 7_1:+79543620 Msa1041870:CDS
GTCACCAGCTCTTGATGCGG+CGG 0.573740 7_1:-79539228 None:intergenic
CGAGATGGAAAGTAGAAATG+TGG 0.573826 7_1:+79544852 Msa1041870:CDS
GCATCCAAATTCACAGACTT+CGG 0.574943 7_1:-79542085 None:intergenic
TTGTCAGATAACTCAATACT+TGG 0.575179 7_1:+79544898 Msa1041870:CDS
TGAGGCAGATGATGCTGCAA+AGG 0.575199 7_1:+79544342 Msa1041870:CDS
AGACTGAGAATCACTTCTAA+GGG 0.576385 7_1:-79540920 None:intergenic
TCACATGGATGCTATGAGAT+GGG 0.576495 7_1:-79540948 None:intergenic
CTTGCGAAAATCACAAGAGA+AGG 0.578295 7_1:+79543646 Msa1041870:CDS
CACAATCACCGCAATGATGT+GGG 0.578357 7_1:-79544486 None:intergenic
AAAGGAGCTTTAGATTTGAG+TGG 0.579334 7_1:-79543770 None:intergenic
ACCGGAAGTAGGCTCATTGG+CGG 0.579906 7_1:+79541992 Msa1041870:CDS
GAAAGTAGTGATGGTGGCGG+TGG 0.581623 7_1:+79539189 Msa1041870:CDS
AAGCATCTAGCATGAATGAT+GGG 0.581668 7_1:-79544877 None:intergenic
AAGATGTATACTGTCAGGAA+AGG 0.582076 7_1:+79544782 Msa1041870:CDS
GAACCCAGCTGCTGTTGCTG+AGG 0.583698 7_1:-79543713 None:intergenic
GAAGGCTGGAAAGAAGCAAA+AGG 0.584037 7_1:+79544045 Msa1041870:CDS
GGAGAACCTAGTGACGCGGC+GGG 0.584551 7_1:-79543983 None:intergenic
TGGTAGTTGTTTCTTAACAG+TGG 0.585131 7_1:-79543192 None:intergenic
GAGATGGAAAGTAGAAATGT+GGG 0.585552 7_1:+79544853 Msa1041870:CDS
TGTTTGTGGTAACATTCTTG+AGG 0.586608 7_1:+79539362 Msa1041870:CDS
GCGATGGGCGATTACTATTG+GGG 0.587332 7_1:-79538653 None:intergenic
ATGTGGGATGAGGTGAACCC+TGG 0.587853 7_1:+79542169 Msa1041870:CDS
AGAACAGTTTAATAGACACT+TGG 0.587882 7_1:+79544528 Msa1041870:CDS
GGCGGAGCCTATGGAGACGA+TGG 0.591159 7_1:+79541923 Msa1041870:CDS
ATTTGACAAAAGAAAATCAA+AGG 0.591890 7_1:-79545462 None:intergenic
GGGACGAGTGGATGTTCAAG+GGG 0.591895 7_1:+79544803 Msa1041870:CDS
GTGTTGGAAGAACCGGAAGT+AGG 0.595103 7_1:+79541981 Msa1041870:CDS
ACAAATATTTCTGAGTGACC+TGG 0.595652 7_1:-79543287 None:intergenic
AATCTACACATTCTTTGGGA+GGG 0.595704 7_1:+79545482 Msa1041870:three_prime_UTR
CATACATGCATGTTAAGCCT+AGG 0.595796 7_1:-79541765 None:intergenic
TCAATTATCTGAAGAGTCTG+AGG 0.595989 7_1:-79540844 None:intergenic
AAATCTACACATTCTTTGGG+AGG 0.596307 7_1:+79545481 Msa1041870:three_prime_UTR
GACTCTTCAGATAATTGAGA+AGG 0.596715 7_1:+79540849 Msa1041870:CDS
CGACCACATTAATTTCTTCG+GGG 0.597538 7_1:+79543957 Msa1041870:CDS
TTCTTTCCAGCCTTCCCTTG+CGG 0.598633 7_1:-79544037 None:intergenic
AAATAGGGTTTAAGCCTACT+CGG 0.599873 7_1:+79543918 Msa1041870:CDS
CCAGCTCCATCTGTGAAGAG+TGG 0.601958 7_1:+79543839 Msa1041870:CDS
GAAGCTGAACCATTGACCGC+GGG 0.604224 7_1:-79540886 None:intergenic
GGTACATTATCAGACAAACC+AGG 0.604517 7_1:-79542187 None:intergenic
TAGGAAAGCAGCTAAGGCAA+TGG 0.605790 7_1:-79545171 None:intergenic
ATTCTGCAATACATACAGAC+AGG 0.606020 7_1:+79540759 Msa1041870:CDS
TTAGATAGATCGAGAGAACC+AGG 0.607166 7_1:+79539024 Msa1041870:CDS
ACAACTTGAGCTCAGACCCA+TGG 0.607186 7_1:+79542221 Msa1041870:CDS
AGGGACGAGTGGATGTTCAA+GGG 0.609571 7_1:+79544802 Msa1041870:CDS
TGCTGTACCGGTATCCCCAT+AGG 0.609746 7_1:-79545367 None:intergenic
CTCTGCCAAAACTACCGCAA+GGG 0.611035 7_1:+79544023 Msa1041870:CDS
GCCAAAACTACCGCAAGGGA+AGG 0.612070 7_1:+79544027 Msa1041870:CDS
TCTGTTCCTGAAAAGAGCAT+CGG 0.616052 7_1:+79541902 Msa1041870:CDS
ATGATGATAATAAAACAGAC+GGG 0.617056 7_1:+79544689 Msa1041870:CDS
CGGAGGAAGAGGAGTTCATG+TGG 0.617778 7_1:+79542152 Msa1041870:CDS
AAAACATCTCAACATTTGGG+TGG 0.617967 7_1:+79543560 Msa1041870:CDS
AAAGAAAATCAAAGGAGTGG+GGG 0.618293 7_1:-79545454 None:intergenic
GAAGCTTATCAAGGGTACCC+AGG 0.619064 7_1:+79545104 Msa1041870:three_prime_UTR
ACTCTGCCAAAACTACCGCA+AGG 0.619475 7_1:+79544022 Msa1041870:CDS
TCCGCACAAGAATCAATAAG+CGG 0.621141 7_1:+79538888 Msa1041870:five_prime_UTR
AACTACAGTGCCAAGTGAGA+CGG 0.621357 7_1:+79544216 Msa1041870:CDS
AGGTGAAGACTGTTCTGAAG+GGG 0.621418 7_1:-79543447 None:intergenic
AAACCTCAGCAACAGCAGCT+GGG 0.621875 7_1:+79543710 Msa1041870:CDS
TTTAAGCCTACTCGGTCAGG+TGG 0.622249 7_1:+79543926 Msa1041870:CDS
AGAGCTGGTGACTCAGTACA+AGG 0.624110 7_1:+79539239 Msa1041870:CDS
GACTCTGAAAGTAGTGATGG+TGG 0.625930 7_1:+79539183 Msa1041870:CDS
GTTGGAGACTGTTGTCGCAA+AGG 0.627501 7_1:-79543467 None:intergenic
GATGCGGCGGTGGTTGAGGG+TGG 0.627658 7_1:-79539215 None:intergenic
GGGGCATTCATCATTATCAT+GGG 0.628071 7_1:+79543223 Msa1041870:CDS
TGCTGGAGAGAATCTTTCTG+CGG 0.629304 7_1:+79539320 Msa1041870:CDS
AGTTTAATAGACACTTGGAA+TGG 0.631756 7_1:+79544533 Msa1041870:CDS
TTAAGCCAGAAGCTTATCAA+GGG 0.633280 7_1:+79545096 Msa1041870:three_prime_UTR
GTTCCTGAAAAGAGCATCGG+CGG 0.634573 7_1:+79541905 Msa1041870:CDS
TTCATATTGATGAATGAATG+GGG 0.636383 7_1:-79538768 None:intergenic
GTGTTGCAGAGACCTTATCC+GGG 0.636826 7_1:+79542014 Msa1041870:CDS
CTTGAGCTCAGACCCATGGA+TGG 0.637419 7_1:+79542225 Msa1041870:CDS
AAAAGAAAATCAAAGGAGTG+GGG 0.638637 7_1:-79545455 None:intergenic
ATAATTCTTCGATTACATGT+GGG 0.641758 7_1:-79544453 None:intergenic
ATTATCTGAAGAGTCTGAGG+AGG 0.642000 7_1:-79540841 None:intergenic
TCAGCCAAATTACGCATCGA+AGG 0.643348 7_1:-79543515 None:intergenic
AGAGACTCTGAAAGTAGTGA+TGG 0.643593 7_1:+79539180 Msa1041870:CDS
TGTAGCTCATCGATCAATCG+AGG 0.646360 7_1:-79539057 None:intergenic
ATTCAAATTCTTCGGCTGCG+AGG 0.650495 7_1:+79543336 Msa1041870:CDS
ATCGTAGCAACCCCAGAGGT+AGG 0.650618 7_1:-79539126 None:intergenic
TGATTGAGACAAGGCAAGCG+AGG 0.653277 7_1:-79544365 None:intergenic
GAAGGACCACCTGACCGAGT+AGG 0.653335 7_1:-79543932 None:intergenic
GAGGTAGGTTGTTGTCGTTG+AGG 0.655687 7_1:-79539111 None:intergenic
GAAACAACTACCATCATCTG+GGG 0.656842 7_1:+79543202 Msa1041870:CDS
TTAGTATGCAACGAGAACCT+GGG 0.656890 7_1:-79545121 None:intergenic
TTGCATATTTAACACCTATG+GGG 0.659037 7_1:+79545353 Msa1041870:three_prime_UTR
TGTGCTAGTTGATTGAGACA+AGG 0.659929 7_1:-79544374 None:intergenic
GAACAATCCAGATAGCGAGA+TGG 0.661154 7_1:+79544837 Msa1041870:CDS
ACTGTCAGGAAAGGGACGAG+TGG 0.661605 7_1:+79544791 Msa1041870:CDS
AAACAACTACCATCATCTGG+GGG 0.664219 7_1:+79543203 Msa1041870:CDS
GGAGGAAGAGGAGTTCATGT+GGG 0.666115 7_1:+79542153 Msa1041870:CDS
CTGTCTAAGAGATAAAGCGA+AGG 0.669079 7_1:-79540364 None:intergenic
AATCACAAGAGAAGGATATG+CGG 0.670294 7_1:+79543654 Msa1041870:CDS
ATGCAAATGAAGACGCAGAG+AGG 0.671037 7_1:+79541703 Msa1041870:CDS
AGTTGCTGACTCTGTTCCTG+CGG 0.676828 7_1:-79544197 None:intergenic
AGCAGCAATTTGATTCTGAG+GGG 0.679911 7_1:+79543417 Msa1041870:CDS
TCTACTTCCTCCAACAATCG+CGG 0.682019 7_1:+79544082 Msa1041870:CDS
CTTTGCTGTCAGACTACCCG+AGG 0.682806 7_1:+79540423 Msa1041870:CDS
ACGTCTTCAGCAGTCCAGCA+GGG 0.683190 7_1:+79540993 Msa1041870:CDS
GTATTGTTAAGAATATTGGG+CGG 0.684810 7_1:+79540386 Msa1041870:CDS
GTACATTATCAGACAAACCA+GGG 0.685272 7_1:-79542186 None:intergenic
AGAAGCTGAACCATTGACCG+CGG 0.688294 7_1:-79540887 None:intergenic
TTGATCGATGAGCTACAACA+AGG 0.688797 7_1:+79539063 Msa1041870:CDS
TGGAGAACCTAGTGACGCGG+CGG 0.688959 7_1:-79543984 None:intergenic
GATGAACTCCCACATCATTG+CGG 0.690002 7_1:+79544478 Msa1041870:CDS
TGAGTCACCAGCTCTTGATG+CGG 0.698871 7_1:-79539231 None:intergenic
TTAAGCCTAGGATCCAGCCA+TGG 0.699790 7_1:-79541753 None:intergenic
GGAACTCAACTTCAATCCCG+CGG 0.701859 7_1:+79540870 Msa1041870:CDS
AGACCCCGAAGAAATTAATG+TGG 0.705849 7_1:-79543960 None:intergenic
AGATGGAAAGTAGAAATGTG+GGG 0.706843 7_1:+79544854 Msa1041870:CDS
ATGGGGATACCGGTACAGCA+AGG 0.710520 7_1:+79545370 Msa1041870:three_prime_UTR
GGACGAGTGGATGTTCAAGG+GGG 0.711357 7_1:+79544804 Msa1041870:CDS
GGTCATCTTCATCCAAACGG+CGG 0.713284 7_1:+79545391 Msa1041870:three_prime_UTR
CAATGCTTGTGTGTATTGTG+TGG 0.715495 7_1:+79544748 Msa1041870:CDS
TCACAAGAGAAGGATATGCG+GGG 0.724395 7_1:+79543656 Msa1041870:CDS
TCTGAAAGTAGTGATGGTGG+CGG 0.725899 7_1:+79539186 Msa1041870:CDS
ATTTGGAGAACCTAGTGACG+CGG 0.733407 7_1:-79543987 None:intergenic
TGATTCAAAATTGTACAACG+AGG 0.733693 7_1:-79538815 None:intergenic
ACGACAACAACCTACCTCTG+GGG 0.737955 7_1:+79539116 Msa1041870:CDS
AACAACTACCATCATCTGGG+GGG 0.742353 7_1:+79543204 Msa1041870:CDS
CAACATCGTAGCAACCCCAG+AGG 0.765435 7_1:-79539130 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATTTGATGAAAT+TGG + chr7_1:79541078-79541097 Msa1041870:intron 10.0%
!! TTATTAGTAATTTCATTAAT+TGG - chr7_1:79542974-79542993 None:intergenic 10.0%
!!! AAATTTTAGTGTTAGAATTA+GGG + chr7_1:79538956-79538975 Msa1041870:five_prime_UTR 15.0%
!! ATAGTCAAATTAGTAATTAT+CGG - chr7_1:79539297-79539316 None:intergenic 15.0%
!!! ATTGTAATTGATTTTGAATT+TGG + chr7_1:79539450-79539469 Msa1041870:intron 15.0%
!! TTCAAAAAGAATAAATTTCT+AGG + chr7_1:79539770-79539789 Msa1041870:intron 15.0%
!! GAAAAAAGAAAAACATATTT+AGG + chr7_1:79539816-79539835 Msa1041870:intron 15.0%
!!! CATATTTTAGATATCAAAAA+AGG + chr7_1:79541405-79541424 Msa1041870:intron 15.0%
!!! TATAACTTGTCAAATTTTAA+AGG - chr7_1:79541555-79541574 None:intergenic 15.0%
!!! GTTATCATATTTTAATAGAA+TGG + chr7_1:79541831-79541850 Msa1041870:intron 15.0%
!!! TTTTTTAAGTCAACAAAATT+AGG - chr7_1:79542859-79542878 None:intergenic 15.0%
!!! TTGATAACTTTATTTTATGA+TGG + chr7_1:79545317-79545336 Msa1041870:three_prime_UTR 15.0%
!! ATTCATATTGATGAATGAAT+GGG - chr7_1:79538772-79538791 None:intergenic 20.0%
!! AATTCATATTGATGAATGAA+TGG - chr7_1:79538773-79538792 None:intergenic 20.0%
!! ATTCATTCATCAATATGAAT+TGG + chr7_1:79538772-79538791 Msa1041870:five_prime_UTR 20.0%
!! TTCATTCATCAATATGAATT+GGG + chr7_1:79538773-79538792 Msa1041870:five_prime_UTR 20.0%
!! CTAATTCTAACACTAAAATT+TGG - chr7_1:79538957-79538976 None:intergenic 20.0%
!!! CAAATTTTAGTGTTAGAATT+AGG + chr7_1:79538955-79538974 Msa1041870:five_prime_UTR 20.0%
!!! TGTTTTGTTTGTATCATTTA+TGG + chr7_1:79539409-79539428 Msa1041870:intron 20.0%
!!! ATAAATTTCTAGGTTTTATG+CGG + chr7_1:79539780-79539799 Msa1041870:intron 20.0%
!!! TTTTTTGTGTCATTATGAAA+AGG + chr7_1:79539839-79539858 Msa1041870:intron 20.0%
!!! TTTTTGTGTCATTATGAAAA+GGG + chr7_1:79539840-79539859 Msa1041870:intron 20.0%
!! ACGATGAATTAATATTAGAT+AGG + chr7_1:79539883-79539902 Msa1041870:intron 20.0%
!! ACAGTATTGTTAAGAATATT+GGG + chr7_1:79540383-79540402 Msa1041870:CDS 20.0%
!! TGAAATGTTTAGATTTGATT+TGG + chr7_1:79540572-79540591 Msa1041870:intron 20.0%
!!! GTTAGATGATTCATTTTTTA+TGG - chr7_1:79540632-79540651 None:intergenic 20.0%
!! TGAAAAATTCCATTTATTGA+CGG - chr7_1:79540654-79540673 None:intergenic 20.0%
!! TAAAATTAGAAAATACTCGA+AGG - chr7_1:79540688-79540707 None:intergenic 20.0%
!! TTAAGTCTGTAAAGATTATT+AGG - chr7_1:79541336-79541355 None:intergenic 20.0%
!! TTTGTAAATTTCTAACTTGA+AGG - chr7_1:79542404-79542423 None:intergenic 20.0%
!! AATTATGTCTTAGGTTTATT+AGG - chr7_1:79542905-79542924 None:intergenic 20.0%
!! AAATTAGGAAATTATGTCTT+AGG - chr7_1:79542914-79542933 None:intergenic 20.0%
!! CATAATTTCCTAATTTAACT+TGG + chr7_1:79542918-79542937 Msa1041870:intron 20.0%
!! GATAATTATGATTTAGTTAC+AGG - chr7_1:79543005-79543024 None:intergenic 20.0%
!! TATGATGATAATAAAACAGA+CGG + chr7_1:79544688-79544707 Msa1041870:CDS 20.0%
!!! TTAGTCTATTTGAATTTTGA+AGG + chr7_1:79544988-79545007 Msa1041870:intron 20.0%
!! ACAACAAAAAGAAACAAAAA+GGG - chr7_1:79545218-79545237 None:intergenic 20.0%
!! TACAACAAAAAGAAACAAAA+AGG - chr7_1:79545219-79545238 None:intergenic 20.0%
!! ATTTGACAAAAGAAAATCAA+AGG - chr7_1:79545465-79545484 None:intergenic 20.0%
!! ATTAGATTTTATCACTTCAC+TGG - chr7_1:79538627-79538646 None:intergenic 25.0%
! TTCATATTGATGAATGAATG+GGG - chr7_1:79538771-79538790 None:intergenic 25.0%
! TCATTCATCAATATGAATTG+GGG + chr7_1:79538774-79538793 Msa1041870:five_prime_UTR 25.0%
!! GATTCAATTTTTCATGAACA+TGG + chr7_1:79538984-79539003 Msa1041870:exon 25.0%
! ACTAATTTGACTATAATTGC+TGG + chr7_1:79539303-79539322 Msa1041870:CDS 25.0%
! ACAAAACAAGAACAATTTCT+CGG - chr7_1:79539397-79539416 None:intergenic 25.0%
!!! GAAGTTTTATCATGGAAAAA+TGG + chr7_1:79539560-79539579 Msa1041870:intron 25.0%
!! TTCATCCATTTTATAGTTGT+TGG + chr7_1:79539615-79539634 Msa1041870:intron 25.0%
! CATTATGAAAAGGGAAAAAA+AGG + chr7_1:79539849-79539868 Msa1041870:intron 25.0%
!!! TCAGTTTATTTTCTCGAATA+GGG + chr7_1:79540132-79540151 Msa1041870:intron 25.0%
! TTGATGCTAAGTTATAACAT+AGG + chr7_1:79540178-79540197 Msa1041870:intron 25.0%
! TGATGCTAAGTTATAACATA+GGG + chr7_1:79540179-79540198 Msa1041870:intron 25.0%
! ACAAATGTAAACAAGGATTA+AGG - chr7_1:79540233-79540252 None:intergenic 25.0%
!! TAATCCTTGTTTACATTTGT+TGG + chr7_1:79540233-79540252 Msa1041870:intron 25.0%
!! AATCCTTGTTTACATTTGTT+GGG + chr7_1:79540234-79540253 Msa1041870:intron 25.0%
!!! TTGTCGATTTGTTATAAGAA+AGG + chr7_1:79540285-79540304 Msa1041870:intron 25.0%
!!! TGTCGATTTGTTATAAGAAA+GGG + chr7_1:79540286-79540305 Msa1041870:intron 25.0%
! AATTATGTTAATGACTTTCC+AGG + chr7_1:79540321-79540340 Msa1041870:intron 25.0%
! GACAGTATTGTTAAGAATAT+TGG + chr7_1:79540382-79540401 Msa1041870:CDS 25.0%
!!! TTAGATTTGATTTGGTTACA+TGG + chr7_1:79540580-79540599 Msa1041870:intron 25.0%
!!! TTATACACGCATTTTTAACT+AGG + chr7_1:79540705-79540724 Msa1041870:intron 25.0%
! CTAAAATGTAAAGGAGTAAT+TGG - chr7_1:79540737-79540756 None:intergenic 25.0%
!! CAATTACTCCTTTACATTTT+AGG + chr7_1:79540735-79540754 Msa1041870:intron 25.0%
! TGAATCCCAAATATTTAGAA+AGG + chr7_1:79540968-79540987 Msa1041870:CDS 25.0%
! TATGTAATCTGTTGCATTAA+AGG - chr7_1:79541044-79541063 None:intergenic 25.0%
!!! ATTTTTGGCCTACTATATTA+TGG + chr7_1:79541268-79541287 Msa1041870:intron 25.0%
!!! TTTTTGGCCTACTATATTAT+GGG + chr7_1:79541269-79541288 Msa1041870:intron 25.0%
! TTTGTTCATAGTATGACATA+TGG + chr7_1:79541302-79541321 Msa1041870:intron 25.0%
!! TGATAATTTAAAGGCATAGA+GGG - chr7_1:79541476-79541495 None:intergenic 25.0%
!!! GTTGATTCGTGATAATTTAA+AGG - chr7_1:79541485-79541504 None:intergenic 25.0%
!!! TCAAATTTTAAAGGCATAGA+GGG - chr7_1:79541546-79541565 None:intergenic 25.0%
!!! TAAAGGAGTATTTGATGATA+TGG + chr7_1:79541665-79541684 Msa1041870:CDS 25.0%
! ACAGATTGAATAGTATAAAG+AGG - chr7_1:79541809-79541828 None:intergenic 25.0%
! TTCTAGTGTTTCAAATAGTT+TGG + chr7_1:79541952-79541971 Msa1041870:CDS 25.0%
! TCTAGTGTTTCAAATAGTTT+GGG + chr7_1:79541953-79541972 Msa1041870:CDS 25.0%
! GATTTGAAAAACTATGTTTG+AGG - chr7_1:79542057-79542076 None:intergenic 25.0%
! TAATTGGGAAAAAACTGAAT+TGG - chr7_1:79542321-79542340 None:intergenic 25.0%
!! TTTTTCCCAATTATGAAATG+AGG + chr7_1:79542328-79542347 Msa1041870:intron 25.0%
!!! ATGTCATCATATTTCAAGTT+GGG - chr7_1:79542619-79542638 None:intergenic 25.0%
! AAGTAAATGTCTATCACAAT+AGG + chr7_1:79542691-79542710 Msa1041870:intron 25.0%
! AGTAAATGTCTATCACAATA+GGG + chr7_1:79542692-79542711 Msa1041870:intron 25.0%
!! AGCAACAAAATTTTTGTATC+AGG + chr7_1:79542733-79542752 Msa1041870:intron 25.0%
! ATCTTATGCCAAGTTAAATT+AGG - chr7_1:79542929-79542948 None:intergenic 25.0%
! TATTAACCTTTGTTCCAATT+GGG - chr7_1:79543163-79543182 None:intergenic 25.0%
! TTATTAACCTTTGTTCCAAT+TGG - chr7_1:79543164-79543183 None:intergenic 25.0%
! ATTGGAACAAAGGTTAATAA+AGG + chr7_1:79543164-79543183 Msa1041870:CDS 25.0%
! AATAGGAATGTCCAAAATTA+CGG + chr7_1:79543391-79543410 Msa1041870:CDS 25.0%
! TCTTAAAACATCTCAACATT+TGG + chr7_1:79543556-79543575 Msa1041870:CDS 25.0%
! CTTAAAACATCTCAACATTT+GGG + chr7_1:79543557-79543576 Msa1041870:CDS 25.0%
! AAAGAAGTTGCTAAAGATAA+CGG - chr7_1:79543683-79543702 None:intergenic 25.0%
!! CTTCTCGTAATTGATTTATT+GGG - chr7_1:79543872-79543891 None:intergenic 25.0%
!! ACTTCTCGTAATTGATTTAT+TGG - chr7_1:79543873-79543892 None:intergenic 25.0%
!! AAGATTTGAAATTGGATTCA+AGG - chr7_1:79544146-79544165 None:intergenic 25.0%
!! GAGCTTAAAAGATTTGAAAT+TGG - chr7_1:79544154-79544173 None:intergenic 25.0%
! ACAGAAATTAGAAATCTCAT+TGG + chr7_1:79544394-79544413 Msa1041870:CDS 25.0%
! ATAATTCTTCGATTACATGT+GGG - chr7_1:79544456-79544475 None:intergenic 25.0%
! AATAATTCTTCGATTACATG+TGG - chr7_1:79544457-79544476 None:intergenic 25.0%
! ACATGTAATCGAAGAATTAT+TGG + chr7_1:79544456-79544475 Msa1041870:CDS 25.0%
! ACAAAAGAAAGAGAACAAAA+TGG + chr7_1:79544562-79544581 Msa1041870:CDS 25.0%
! ATGATGATAATAAAACAGAC+GGG + chr7_1:79544689-79544708 Msa1041870:CDS 25.0%
! AAGACTCATAGTTAATTGAA+TGG + chr7_1:79544936-79544955 Msa1041870:intron 25.0%
!!! GTTCAAATTTTTGTACTGAT+TGG + chr7_1:79545014-79545033 Msa1041870:intron 25.0%
!! ATTCATAACTTGTATTGCAT+TGG + chr7_1:79545065-79545084 Msa1041870:exon 25.0%
!!! CAATGGTTTTAAATGTGAAA+AGG - chr7_1:79545157-79545176 None:intergenic 25.0%
!!! ACTTTATTTTATGATGGTGA+TGG + chr7_1:79545323-79545342 Msa1041870:three_prime_UTR 25.0%
!!! CTTTATTTTATGATGGTGAT+GGG + chr7_1:79545324-79545343 Msa1041870:three_prime_UTR 25.0%
!!! TTTATTTTATGATGGTGATG+GGG + chr7_1:79545325-79545344 Msa1041870:three_prime_UTR 25.0%
! ATTTGCATATTTAACACCTA+TGG + chr7_1:79545351-79545370 Msa1041870:three_prime_UTR 25.0%
! TTTGCATATTTAACACCTAT+GGG + chr7_1:79545352-79545371 Msa1041870:three_prime_UTR 25.0%
! TTTATGCAGCTGATAAATTA+AGG - chr7_1:79545558-79545577 None:intergenic 25.0%
ATCAATATGAATTGGGGATT+AGG + chr7_1:79538780-79538799 Msa1041870:five_prime_UTR 30.0%
TCAATATGAATTGGGGATTA+GGG + chr7_1:79538781-79538800 Msa1041870:five_prime_UTR 30.0%
TGATTCAAAATTGTACAACG+AGG - chr7_1:79538818-79538837 None:intergenic 30.0%
! TGCTTGTGCTATTGATAAAT+TGG + chr7_1:79539517-79539536 Msa1041870:intron 30.0%
! GCTTGTGCTATTGATAAATT+GGG + chr7_1:79539518-79539537 Msa1041870:intron 30.0%
TGAATGCTAGTTAGAAAAGA+AGG + chr7_1:79539583-79539602 Msa1041870:intron 30.0%
CGTTACCAACAACTATAAAA+TGG - chr7_1:79539623-79539642 None:intergenic 30.0%
TACAAATTCTACAAAAGACC+AGG - chr7_1:79540037-79540056 None:intergenic 30.0%
TTGTAGAATTTGTACGCAAT+AGG + chr7_1:79540043-79540062 Msa1041870:intron 30.0%
TGTAGAATTTGTACGCAATA+GGG + chr7_1:79540044-79540063 Msa1041870:intron 30.0%
!! GTCAGTTTATTTTCTCGAAT+AGG + chr7_1:79540131-79540150 Msa1041870:intron 30.0%
! ATCCTTGTTTACATTTGTTG+GGG + chr7_1:79540235-79540254 Msa1041870:intron 30.0%
GTATTGTTAAGAATATTGGG+CGG + chr7_1:79540386-79540405 Msa1041870:CDS 30.0%
TATTGTTAAGAATATTGGGC+GGG + chr7_1:79540387-79540406 Msa1041870:CDS 30.0%
TCTATCATCTTTCCTTCTAT+TGG + chr7_1:79540457-79540476 Msa1041870:intron 30.0%
!!! TTCATTTTTTATGGCAATGC+CGG - chr7_1:79540623-79540642 None:intergenic 30.0%
ATCATCTAACCGTCAATAAA+TGG + chr7_1:79540642-79540661 Msa1041870:intron 30.0%
GCAGAATACCTAAAATGTAA+AGG - chr7_1:79540746-79540765 None:intergenic 30.0%
! CTAAATATTTGGGATTCACA+TGG - chr7_1:79540966-79540985 None:intergenic 30.0%
CGTTGCCTTTCTAAATATTT+GGG - chr7_1:79540976-79540995 None:intergenic 30.0%
ACGTTGCCTTTCTAAATATT+TGG - chr7_1:79540977-79540996 None:intergenic 30.0%
AATCTGTTGCATTAAAGGAT+TGG - chr7_1:79541039-79541058 None:intergenic 30.0%
GTGTTCCTTGAATAATGAAA+CGG + chr7_1:79541115-79541134 Msa1041870:intron 30.0%
! CCTACTATATTATGGGTTTT+GGG + chr7_1:79541276-79541295 Msa1041870:intron 30.0%
! CTACTATATTATGGGTTTTG+GGG + chr7_1:79541277-79541296 Msa1041870:intron 30.0%
! GTGATAATTTAAAGGCATAG+AGG - chr7_1:79541477-79541496 None:intergenic 30.0%
!! GTCAAATTTTAAAGGCATAG+AGG - chr7_1:79541547-79541566 None:intergenic 30.0%
AGAATTAAGTACCAGAGATA+GGG - chr7_1:79541613-79541632 None:intergenic 30.0%
AAGAATTAAGTACCAGAGAT+AGG - chr7_1:79541614-79541633 None:intergenic 30.0%
!! TTTTGTTTCATGCAGACTAA+AGG + chr7_1:79541648-79541667 Msa1041870:intron 30.0%
AATAATCAGCATACTCATAG+AGG + chr7_1:79541866-79541885 Msa1041870:CDS 30.0%
GTCAAAGAACTGGAAAAATT+CGG + chr7_1:79542132-79542151 Msa1041870:CDS 30.0%
CTGAATTGGACAAACAAATT+GGG - chr7_1:79542307-79542326 None:intergenic 30.0%
ACTGAATTGGACAAACAAAT+TGG - chr7_1:79542308-79542327 None:intergenic 30.0%
AAGCACCTCATTTCATAATT+GGG - chr7_1:79542336-79542355 None:intergenic 30.0%
! AAAGCACCTCATTTCATAAT+TGG - chr7_1:79542337-79542356 None:intergenic 30.0%
CAAAACAAGGTAGATCAAAT+TGG - chr7_1:79542360-79542379 None:intergenic 30.0%
!!! GATCTACCTTGTTTTGTTTT+TGG + chr7_1:79542364-79542383 Msa1041870:intron 30.0%
CACATTCCAAAAACAAAACA+AGG - chr7_1:79542373-79542392 None:intergenic 30.0%
ATTTCTAACTTGAAGGACAA+GGG - chr7_1:79542397-79542416 None:intergenic 30.0%
AATTTCTAACTTGAAGGACA+AGG - chr7_1:79542398-79542417 None:intergenic 30.0%
ATTGCCATAAAATTACTTGC+AGG - chr7_1:79542439-79542458 None:intergenic 30.0%
! ATTTTTATCAAAACCAGCCA+GGG - chr7_1:79542481-79542500 None:intergenic 30.0%
!! CACAAATGAATTTTCAAGAC+AGG - chr7_1:79542565-79542584 None:intergenic 30.0%
!! TGTCATCATATTTCAAGTTG+GGG - chr7_1:79542618-79542637 None:intergenic 30.0%
! GATGTCATCATATTTCAAGT+TGG - chr7_1:79542620-79542639 None:intergenic 30.0%
AGTAAAGCAAACTAAAGAAG+AGG + chr7_1:79542642-79542661 Msa1041870:intron 30.0%
GTAAAGCAAACTAAAGAAGA+GGG + chr7_1:79542643-79542662 Msa1041870:intron 30.0%
AACATGACAAAATGCTTGAT+CGG + chr7_1:79542667-79542686 Msa1041870:intron 30.0%
TAGGCATATTTATTATCCCA+CGG - chr7_1:79542840-79542859 None:intergenic 30.0%
CTGCATGCAAAAAACAAAAT+TGG - chr7_1:79543111-79543130 None:intergenic 30.0%
!!! CAATTTTGTTTTTTGCATGC+AGG + chr7_1:79543109-79543128 Msa1041870:intron 30.0%
TCATATTCAATTTGGCACTT+GGG - chr7_1:79543265-79543284 None:intergenic 30.0%
TTCATATTCAATTTGGCACT+TGG - chr7_1:79543266-79543285 None:intergenic 30.0%
!! ATATTTGTTTCTGCTCCTAA+TGG + chr7_1:79543302-79543321 Msa1041870:CDS 30.0%
ATAGGAATGTCCAAAATTAC+GGG + chr7_1:79543392-79543411 Msa1041870:CDS 30.0%
!!! TGAGATGTTTTAAGAGATGT+TGG - chr7_1:79543551-79543570 None:intergenic 30.0%
TAAATCAATTACGAGAAGTC+TGG + chr7_1:79543874-79543893 Msa1041870:CDS 30.0%
AGAGTAGGTGAATAATCATT+TGG - chr7_1:79544007-79544026 None:intergenic 30.0%
! ATTCAAGGTATTCTTATTGG+CGG - chr7_1:79544131-79544150 None:intergenic 30.0%
! TGGATTCAAGGTATTCTTAT+TGG - chr7_1:79544134-79544153 None:intergenic 30.0%
!! CAATTCTGGAAGATTTTACT+GGG - chr7_1:79544324-79544343 None:intergenic 30.0%
!! TCAATTCTGGAAGATTTTAC+TGG - chr7_1:79544325-79544344 None:intergenic 30.0%
AGTAAAATCTTCCAGAATTG+AGG + chr7_1:79544324-79544343 Msa1041870:CDS 30.0%
AGAACAGTTTAATAGACACT+TGG + chr7_1:79544528-79544547 Msa1041870:CDS 30.0%
AGTTTAATAGACACTTGGAA+TGG + chr7_1:79544533-79544552 Msa1041870:CDS 30.0%
ATTTGAAGATGTATACTGTC+AGG + chr7_1:79544777-79544796 Msa1041870:CDS 30.0%
TTGTCAGATAACTCAATACT+TGG + chr7_1:79544898-79544917 Msa1041870:CDS 30.0%
! CAAAATTTGTTTGACTGCTT+AGG - chr7_1:79545193-79545212 None:intergenic 30.0%
!! GTTTCTTTTTGTTGTACTTG+AGG + chr7_1:79545223-79545242 Msa1041870:three_prime_UTR 30.0%
TTGCATATTTAACACCTATG+GGG + chr7_1:79545353-79545372 Msa1041870:three_prime_UTR 30.0%
AAAAGAAAATCAAAGGAGTG+GGG - chr7_1:79545458-79545477 None:intergenic 30.0%
CAAAAGAAAATCAAAGGAGT+GGG - chr7_1:79545459-79545478 None:intergenic 30.0%
ACAAAAGAAAATCAAAGGAG+TGG - chr7_1:79545460-79545479 None:intergenic 30.0%
TGTCAAATCTACACATTCTT+TGG + chr7_1:79545477-79545496 Msa1041870:three_prime_UTR 30.0%
GTCAAATCTACACATTCTTT+GGG + chr7_1:79545478-79545497 Msa1041870:three_prime_UTR 30.0%
TGTTTGTGGTAACATTCTTG+AGG + chr7_1:79539362-79539381 Msa1041870:CDS 35.0%
!! AATTGGGTTAGTGTTGTTCT+CGG + chr7_1:79539534-79539553 Msa1041870:intron 35.0%
!! TATAGTTGTTGGTAACGTCT+AGG + chr7_1:79539626-79539645 Msa1041870:intron 35.0%
!!! TTTCTTTTTTCTCGTGTGCA+TGG - chr7_1:79539807-79539826 None:intergenic 35.0%
TGCATTGCAATGATTCTGTT+AGG + chr7_1:79539922-79539941 Msa1041870:intron 35.0%
AATTGCATATGGACTCCATT+AGG - chr7_1:79539975-79539994 None:intergenic 35.0%
GTCCATATGCAATTTACAAG+TGG + chr7_1:79539981-79540000 Msa1041870:intron 35.0%
CAATAGGGACTAAGAATCTT+TGG + chr7_1:79540059-79540078 Msa1041870:intron 35.0%
CAAATCGACAAACAAGCAAT+GGG - chr7_1:79540276-79540295 None:intergenic 35.0%
ACAAATCGACAAACAAGCAA+TGG - chr7_1:79540277-79540296 None:intergenic 35.0%
ATAGATAGATATCTGACCTC+GGG - chr7_1:79540442-79540461 None:intergenic 35.0%
GATAGATAGATATCTGACCT+CGG - chr7_1:79540443-79540462 None:intergenic 35.0%
AAGGAAGTAATGCCAATAGA+AGG - chr7_1:79540472-79540491 None:intergenic 35.0%
! GGATGATAATGCAATAGTTC+CGG + chr7_1:79540601-79540620 Msa1041870:intron 35.0%
ATTCTGCAATACATACAGAC+AGG + chr7_1:79540759-79540778 Msa1041870:CDS 35.0%
AAAGATGCCTCATACTTGAA+TGG - chr7_1:79540798-79540817 None:intergenic 35.0%
!! TCAAGTATGAGGCATCTTTT+TGG + chr7_1:79540799-79540818 Msa1041870:CDS 35.0%
TCAATTATCTGAAGAGTCTG+AGG - chr7_1:79540847-79540866 None:intergenic 35.0%
GACTCTTCAGATAATTGAGA+AGG + chr7_1:79540849-79540868 Msa1041870:CDS 35.0%
AGACTGAGAATCACTTCTAA+GGG - chr7_1:79540923-79540942 None:intergenic 35.0%
TAACCAAGCTCAAAAGTTGA+TGG - chr7_1:79541161-79541180 None:intergenic 35.0%
! GCGTGAACTGTTCTAATTTT+TGG + chr7_1:79541253-79541272 Msa1041870:intron 35.0%
! GCCTACTATATTATGGGTTT+TGG + chr7_1:79541275-79541294 Msa1041870:intron 35.0%
CCCAAAACCCATAATATAGT+AGG - chr7_1:79541279-79541298 None:intergenic 35.0%
AGATATCAAAAAAGGCCTTC+CGG + chr7_1:79541413-79541432 Msa1041870:intron 35.0%
ATTATATCCATCGTCTCCAT+AGG - chr7_1:79541933-79541952 None:intergenic 35.0%
! GTTTCAAATAGTTTGGGTTC+AGG + chr7_1:79541959-79541978 Msa1041870:CDS 35.0%
ATTTGGATGCACATAGCATA+AGG + chr7_1:79542098-79542117 Msa1041870:CDS 35.0%
AAAGAACTGGAAAAATTCGG+AGG + chr7_1:79542135-79542154 Msa1041870:CDS 35.0%
GTACATTATCAGACAAACCA+GGG - chr7_1:79542189-79542208 None:intergenic 35.0%
! CTCAAGTTGTTAGAGACATT+AGG - chr7_1:79542211-79542230 None:intergenic 35.0%
GCTTACCAAATTGTCTTCAT+CGG - chr7_1:79542251-79542270 None:intergenic 35.0%
!! TGGTAAGCTTGCTACAATAA+AGG + chr7_1:79542263-79542282 Msa1041870:intron 35.0%
!! GGTAAGCTTGCTACAATAAA+GGG + chr7_1:79542264-79542283 Msa1041870:intron 35.0%
! GCATCCTGCAAGTAATTTTA+TGG + chr7_1:79542432-79542451 Msa1041870:intron 35.0%
! CATTTTTATCAAAACCAGCC+AGG - chr7_1:79542482-79542501 None:intergenic 35.0%
!!! AGAAATTGACTTGTCGCTTT+TGG + chr7_1:79542509-79542528 Msa1041870:intron 35.0%
AAATGTCTATCACAATAGGG+TGG + chr7_1:79542695-79542714 Msa1041870:intron 35.0%
AATGTCTATCACAATAGGGT+GGG + chr7_1:79542696-79542715 Msa1041870:intron 35.0%
!! TGGTAGTTGTTTCTTAACAG+TGG - chr7_1:79543195-79543214 None:intergenic 35.0%
AAGAAACAACTACCATCATC+TGG + chr7_1:79543200-79543219 Msa1041870:CDS 35.0%
AGAAACAACTACCATCATCT+GGG + chr7_1:79543201-79543220 Msa1041870:CDS 35.0%
ACCTGGCTTCATATTCAATT+TGG - chr7_1:79543273-79543292 None:intergenic 35.0%
! ACAAATATTTCTGAGTGACC+TGG - chr7_1:79543290-79543309 None:intergenic 35.0%
ACCCAAGCATTCAAATTCTT+CGG + chr7_1:79543328-79543347 Msa1041870:CDS 35.0%
GACATTCCTATTGTTGTATG+CGG - chr7_1:79543383-79543402 None:intergenic 35.0%
AAAACATCTCAACATTTGGG+TGG + chr7_1:79543560-79543579 Msa1041870:CDS 35.0%
AATCACAAGAGAAGGATATG+CGG + chr7_1:79543654-79543673 Msa1041870:CDS 35.0%
!! AAAGGAGCTTTAGATTTGAG+TGG - chr7_1:79543773-79543792 None:intergenic 35.0%
!!! TGACTTTTCTGAAGTCACTT+TGG - chr7_1:79543804-79543823 None:intergenic 35.0%
AGTAACTGTCCATCTCAAAT+AGG + chr7_1:79543902-79543921 Msa1041870:CDS 35.0%
GTAACTGTCCATCTCAAATA+GGG + chr7_1:79543903-79543922 Msa1041870:CDS 35.0%
AAATAGGGTTTAAGCCTACT+CGG + chr7_1:79543918-79543937 Msa1041870:CDS 35.0%
TGATTGTAGCATCAAGAAGA+TGG + chr7_1:79544587-79544606 Msa1041870:CDS 35.0%
AAGATGTATACTGTCAGGAA+AGG + chr7_1:79544782-79544801 Msa1041870:CDS 35.0%
AGATGTATACTGTCAGGAAA+GGG + chr7_1:79544783-79544802 Msa1041870:CDS 35.0%
GAGATGGAAAGTAGAAATGT+GGG + chr7_1:79544853-79544872 Msa1041870:CDS 35.0%
AGATGGAAAGTAGAAATGTG+GGG + chr7_1:79544854-79544873 Msa1041870:CDS 35.0%
AAGCATCTAGCATGAATGAT+GGG - chr7_1:79544880-79544899 None:intergenic 35.0%
TTAAGCCAGAAGCTTATCAA+GGG + chr7_1:79545096-79545115 Msa1041870:three_prime_UTR 35.0%
CGTTGCATACTAAAACTAGA+TGG + chr7_1:79545131-79545150 Msa1041870:three_prime_UTR 35.0%
AAAGAAAATCAAAGGAGTGG+GGG - chr7_1:79545457-79545476 None:intergenic 35.0%
AAATCTACACATTCTTTGGG+AGG + chr7_1:79545481-79545500 Msa1041870:three_prime_UTR 35.0%
! AATCTACACATTCTTTGGGA+GGG + chr7_1:79545482-79545501 Msa1041870:three_prime_UTR 35.0%
CACAACATTTGGTCAAATGT+TGG - chr7_1:79545613-79545632 None:intergenic 35.0%
GAGAGGTGAAAGAGAAAAGA+GGG - chr7_1:79538702-79538721 None:intergenic 40.0%
! TGCGGATTTTATTGAGAGTG+TGG - chr7_1:79538874-79538893 None:intergenic 40.0%
TCCGCACAAGAATCAATAAG+CGG + chr7_1:79538888-79538907 Msa1041870:five_prime_UTR 40.0%
!! TCCGCTTATTGATTCTTGTG+CGG - chr7_1:79538892-79538911 None:intergenic 40.0%
TTAGATAGATCGAGAGAACC+AGG + chr7_1:79539024-79539043 Msa1041870:CDS 40.0%
TTGATCGATGAGCTACAACA+AGG + chr7_1:79539063-79539082 Msa1041870:CDS 40.0%
AAACGTTCGTGAAGTTGGAT+TGG - chr7_1:79539091-79539110 None:intergenic 40.0%
! AGAGACTCTGAAAGTAGTGA+TGG + chr7_1:79539180-79539199 Msa1041870:CDS 40.0%
!! ATTGGGTTAGTGTTGTTCTC+GGG + chr7_1:79539535-79539554 Msa1041870:intron 40.0%
!! CTCGGGTAGAAGTTTTATCA+TGG + chr7_1:79539552-79539571 Msa1041870:intron 40.0%
!!! TAGGTTTTCTGAAACCCACT+TGG + chr7_1:79539645-79539664 Msa1041870:intron 40.0%
!!! AGGTTTTCTGAAACCCACTT+GGG + chr7_1:79539646-79539665 Msa1041870:intron 40.0%
CAATGATTCTGTTAGGTACC+AGG + chr7_1:79539929-79539948 Msa1041870:intron 40.0%
ATTCTGTTAGGTACCAGGTT+TGG + chr7_1:79539934-79539953 Msa1041870:intron 40.0%
TTCTGTTAGGTACCAGGTTT+GGG + chr7_1:79539935-79539954 Msa1041870:intron 40.0%
TATGGACTCCATTAGGATAC+CGG - chr7_1:79539968-79539987 None:intergenic 40.0%
CGCCACTTGTAAATTGCATA+TGG - chr7_1:79539986-79540005 None:intergenic 40.0%
! ATAGGGCTGATGTCAACTTT+TGG + chr7_1:79540149-79540168 Msa1041870:intron 40.0%
TGCCCCAACAAATGTAAACA+AGG - chr7_1:79540240-79540259 None:intergenic 40.0%
CTGTCTAAGAGATAAAGCGA+AGG - chr7_1:79540367-79540386 None:intergenic 40.0%
!!! TGAGGCATCTTTTTGGAACT+TGG + chr7_1:79540806-79540825 Msa1041870:CDS 40.0%
!!! CATCTTTTTGGAACTTGGAG+AGG + chr7_1:79540811-79540830 Msa1041870:CDS 40.0%
ATTATCTGAAGAGTCTGAGG+AGG - chr7_1:79540844-79540863 None:intergenic 40.0%
GAGACTGAGAATCACTTCTA+AGG - chr7_1:79540924-79540943 None:intergenic 40.0%
TCACATGGATGCTATGAGAT+GGG - chr7_1:79540951-79540970 None:intergenic 40.0%
TTCACATGGATGCTATGAGA+TGG - chr7_1:79540952-79540971 None:intergenic 40.0%
CAGCACCGTTTCATTATTCA+AGG - chr7_1:79541123-79541142 None:intergenic 40.0%
CTTGAATAATGAAACGGTGC+TGG + chr7_1:79541121-79541140 Msa1041870:intron 40.0%
! TCGTGATAAGTACTGTGAAC+CGG - chr7_1:79541435-79541454 None:intergenic 40.0%
! GGAGTATTTGATGATATGGC+TGG + chr7_1:79541669-79541688 Msa1041870:CDS 40.0%
CATACATGCATGTTAAGCCT+AGG - chr7_1:79541768-79541787 None:intergenic 40.0%
! TCTGTTCCTGAAAAGAGCAT+CGG + chr7_1:79541902-79541921 Msa1041870:CDS 40.0%
! AATAGTTTGGGTTCAGGTGT+TGG + chr7_1:79541965-79541984 Msa1041870:CDS 40.0%
GCATCCAAATTCACAGACTT+CGG - chr7_1:79542088-79542107 None:intergenic 40.0%
GGTACATTATCAGACAAACC+AGG - chr7_1:79542190-79542209 None:intergenic 40.0%
ATAGGGTGGGAAAGGATAAT+TGG + chr7_1:79542709-79542728 Msa1041870:intron 40.0%
CGTTTCTATGCATCATTCCT+TGG - chr7_1:79542781-79542800 None:intergenic 40.0%
GAGTCATGCATAGATGTGAT+TGG - chr7_1:79542814-79542833 None:intergenic 40.0%
TGGTGTAATTGTAGAGTCCT+GGG - chr7_1:79542954-79542973 None:intergenic 40.0%
TTGGTGTAATTGTAGAGTCC+TGG - chr7_1:79542955-79542974 None:intergenic 40.0%
TTCCAATTGGGTGTGTGATT+TGG - chr7_1:79543151-79543170 None:intergenic 40.0%
GAAACAACTACCATCATCTG+GGG + chr7_1:79543202-79543221 Msa1041870:CDS 40.0%
AAACAACTACCATCATCTGG+GGG + chr7_1:79543203-79543222 Msa1041870:CDS 40.0%
! GGGGCATTCATCATTATCAT+GGG + chr7_1:79543223-79543242 Msa1041870:CDS 40.0%
GCCAAATTGAATATGAAGCC+AGG + chr7_1:79543269-79543288 Msa1041870:CDS 40.0%
GCCGAAGAATTTGAATGCTT+GGG - chr7_1:79543332-79543351 None:intergenic 40.0%
AGCCGAAGAATTTGAATGCT+TGG - chr7_1:79543333-79543352 None:intergenic 40.0%
TCTATGCCGCATACAACAAT+AGG + chr7_1:79543374-79543393 Msa1041870:CDS 40.0%
ACAGCAGCAATTTGATTCTG+AGG + chr7_1:79543415-79543434 Msa1041870:CDS 40.0%
CAGCAGCAATTTGATTCTGA+GGG + chr7_1:79543416-79543435 Msa1041870:CDS 40.0%
AGCAGCAATTTGATTCTGAG+GGG + chr7_1:79543417-79543436 Msa1041870:CDS 40.0%
! AAGGTGAAGACTGTTCTGAA+GGG - chr7_1:79543451-79543470 None:intergenic 40.0%
AAAGGTGAAGACTGTTCTGA+AGG - chr7_1:79543452-79543471 None:intergenic 40.0%
AACCTGAACATTGGAACGAA+TGG - chr7_1:79543621-79543640 None:intergenic 40.0%
ATTCGTTCCAATGTTCAGGT+TGG + chr7_1:79543620-79543639 Msa1041870:CDS 40.0%
CAAGTTACCAACCTGAACAT+TGG - chr7_1:79543630-79543649 None:intergenic 40.0%
CTTGCGAAAATCACAAGAGA+AGG + chr7_1:79543646-79543665 Msa1041870:CDS 40.0%
ATCACAAGAGAAGGATATGC+GGG + chr7_1:79543655-79543674 Msa1041870:CDS 40.0%
!! GTCACTTTGGCTTTGACTAA+AGG - chr7_1:79543791-79543810 None:intergenic 40.0%
ATGATTCCACTCTTCACAGA+TGG - chr7_1:79543848-79543867 None:intergenic 40.0%
GGCTTAAACCCTATTTGAGA+TGG - chr7_1:79543914-79543933 None:intergenic 40.0%
CGAAGAAATTAATGTGGTCG+GGG - chr7_1:79543957-79543976 None:intergenic 40.0%
CCGAAGAAATTAATGTGGTC+GGG - chr7_1:79543958-79543977 None:intergenic 40.0%
CCCGACCACATTAATTTCTT+CGG + chr7_1:79543955-79543974 Msa1041870:CDS 40.0%
CCCGAAGAAATTAATGTGGT+CGG - chr7_1:79543959-79543978 None:intergenic 40.0%
CCGACCACATTAATTTCTTC+GGG + chr7_1:79543956-79543975 Msa1041870:CDS 40.0%
CGACCACATTAATTTCTTCG+GGG + chr7_1:79543957-79543976 Msa1041870:CDS 40.0%
AGACCCCGAAGAAATTAATG+TGG - chr7_1:79543963-79543982 None:intergenic 40.0%
TTATTGGCGGTATTTGAGCT+CGG - chr7_1:79544118-79544137 None:intergenic 40.0%
TTAAGCTCGTTAGTTGCGAA+AGG + chr7_1:79544166-79544185 Msa1041870:CDS 40.0%
TGACAGCAATGCTTTCAGTT+TGG - chr7_1:79544258-79544277 None:intergenic 40.0%
AACTGAAGCAACTGGTAAAG+AGG - chr7_1:79544284-79544303 None:intergenic 40.0%
TGTGCTAGTTGATTGAGACA+AGG - chr7_1:79544377-79544396 None:intergenic 40.0%
TGCATTTCTCGAATGACATC+AGG - chr7_1:79544433-79544452 None:intergenic 40.0%
ATTGCGGTGATTGTGGTATT+AGG + chr7_1:79544494-79544513 Msa1041870:CDS 40.0%
TAAAACAGACGGGAGTCAAT+TGG + chr7_1:79544699-79544718 Msa1041870:CDS 40.0%
CACACAATACACACAAGCAT+TGG - chr7_1:79544750-79544769 None:intergenic 40.0%
CAATGCTTGTGTGTATTGTG+TGG + chr7_1:79544748-79544767 Msa1041870:CDS 40.0%
CGAGATGGAAAGTAGAAATG+TGG + chr7_1:79544852-79544871 Msa1041870:CDS 40.0%
CAAGCATCTAGCATGAATGA+TGG - chr7_1:79544881-79544900 None:intergenic 40.0%
!! ATAAGCTTCTGGCTTAACCT+TGG - chr7_1:79545093-79545112 None:intergenic 40.0%
GTTAAGCCAGAAGCTTATCA+AGG + chr7_1:79545095-79545114 Msa1041870:three_prime_UTR 40.0%
TTAGTATGCAACGAGAACCT+GGG - chr7_1:79545124-79545143 None:intergenic 40.0%
TTTAGTATGCAACGAGAACC+TGG - chr7_1:79545125-79545144 None:intergenic 40.0%
!!! ATTTTATGATGGTGATGGGG+CGG + chr7_1:79545328-79545347 Msa1041870:three_prime_UTR 40.0%
TTTAACACCTATGGGGATAC+CGG + chr7_1:79545360-79545379 Msa1041870:three_prime_UTR 40.0%
CAAGGTCATCTTCATCCAAA+CGG + chr7_1:79545388-79545407 Msa1041870:three_prime_UTR 40.0%
GCATAATATTATCCGCCGTT+TGG - chr7_1:79545406-79545425 None:intergenic 40.0%
TGCGATGGGCGATTACTATT+GGG - chr7_1:79538657-79538676 None:intergenic 45.0%
AGTAGAAGAAAGGCTGCGAT+GGG - chr7_1:79538671-79538690 None:intergenic 45.0%
GGATCGAGAGAGTAGAAGAA+AGG - chr7_1:79538681-79538700 None:intergenic 45.0%
GGAGAGGTGAAAGAGAAAAG+AGG - chr7_1:79538703-79538722 None:intergenic 45.0%
AGAGAAGAGAGAGAGAGAGA+GGG - chr7_1:79538724-79538743 None:intergenic 45.0%
AAGAGAAGAGAGAGAGAGAG+AGG - chr7_1:79538725-79538744 None:intergenic 45.0%
TGTAGCTCATCGATCAATCG+AGG - chr7_1:79539060-79539079 None:intergenic 45.0%
TGAGGAAACGTTCGTGAAGT+TGG - chr7_1:79539096-79539115 None:intergenic 45.0%
AACGACAACAACCTACCTCT+GGG + chr7_1:79539115-79539134 Msa1041870:CDS 45.0%
! GACTCTGAAAGTAGTGATGG+TGG + chr7_1:79539183-79539202 Msa1041870:CDS 45.0%
!! TCTGAAAGTAGTGATGGTGG+CGG + chr7_1:79539186-79539205 Msa1041870:CDS 45.0%
TGCTGGAGAGAATCTTTCTG+CGG + chr7_1:79539320-79539339 Msa1041870:CDS 45.0%
!! TTTCTGAAACCCACTTGGGT+TGG + chr7_1:79539650-79539669 Msa1041870:intron 45.0%
GAATCAAACCAGAGACCTTG+AGG - chr7_1:79539714-79539733 None:intergenic 45.0%
ATTCTCCCCAGTACCAACTT+GGG + chr7_1:79539730-79539749 Msa1041870:intron 45.0%
! CTAAACTAGCCTACCCAAGT+TGG - chr7_1:79539746-79539765 None:intergenic 45.0%
ATGGACTCCATTAGGATACC+GGG - chr7_1:79539967-79539986 None:intergenic 45.0%
CAAGTGGCGTTATTGAAACG+TGG + chr7_1:79539997-79540016 Msa1041870:intron 45.0%
TTTGGAAACGTGTGTGTGTG+TGG + chr7_1:79540077-79540096 Msa1041870:intron 45.0%
TTGGAAACGTGTGTGTGTGT+GGG + chr7_1:79540078-79540097 Msa1041870:intron 45.0%
! GATAAAGCGAAGGCAGCTTT+TGG - chr7_1:79540357-79540376 None:intergenic 45.0%
CTCCTGTCCATTCAAGTATG+AGG + chr7_1:79540788-79540807 Msa1041870:CDS 45.0%
TGCCTCATACTTGAATGGAC+AGG - chr7_1:79540793-79540812 None:intergenic 45.0%
AATCATTTCACCTACCCTGC+TGG - chr7_1:79541010-79541029 None:intergenic 45.0%
! CTGCCATCAACTTTTGAGCT+TGG + chr7_1:79541155-79541174 Msa1041870:intron 45.0%
! GATAAGTACTGTGAACCGGA+AGG - chr7_1:79541431-79541450 None:intergenic 45.0%
CCAGAGATAGGGTGTAGAAA+AGG - chr7_1:79541602-79541621 None:intergenic 45.0%
! CCTTTTCTACACCCTATCTC+TGG + chr7_1:79541599-79541618 Msa1041870:intron 45.0%
ATGCAAATGAAGACGCAGAG+AGG + chr7_1:79541703-79541722 Msa1041870:CDS 45.0%
ACCTTATCCGGGCAAAGAAA+TGG + chr7_1:79542025-79542044 Msa1041870:CDS 45.0%
ACCATTTCTTTGCCCGGATA+AGG - chr7_1:79542029-79542048 None:intergenic 45.0%
GCTGAAACCATTTCTTTGCC+CGG - chr7_1:79542035-79542054 None:intergenic 45.0%
! AGCACCGAAGTCTGTGAATT+TGG + chr7_1:79542081-79542100 Msa1041870:CDS 45.0%
GCAGTGCAATGTCAAAGAAC+TGG + chr7_1:79542122-79542141 Msa1041870:CDS 45.0%
CTGGAAAAATTCGGAGGAAG+AGG + chr7_1:79542141-79542160 Msa1041870:CDS 45.0%
GATGGCCGATGAAGACAATT+TGG + chr7_1:79542243-79542262 Msa1041870:CDS 45.0%
TAATCAAGACCCATTCACCC+TGG + chr7_1:79542461-79542480 Msa1041870:intron 45.0%
CTATCACAATAGGGTGGGAA+AGG + chr7_1:79542701-79542720 Msa1041870:intron 45.0%
GTAAGACAGAACTGTGACCA+AGG + chr7_1:79542761-79542780 Msa1041870:intron 45.0%
TCTATGCATGACTCTTTCCG+TGG + chr7_1:79542820-79542839 Msa1041870:intron 45.0%
CTATGCATGACTCTTTCCGT+GGG + chr7_1:79542821-79542840 Msa1041870:intron 45.0%
AACTTGGCATAAGATACCCC+AGG + chr7_1:79542934-79542953 Msa1041870:intron 45.0%
GGTGTAATTGTAGAGTCCTG+GGG - chr7_1:79542953-79542972 None:intergenic 45.0%
! CAATTGGGTGTGTGATTTGG+AGG - chr7_1:79543148-79543167 None:intergenic 45.0%
CTCCAAATCACACACCCAAT+TGG + chr7_1:79543146-79543165 Msa1041870:CDS 45.0%
CACACACCCAATTGGAACAA+AGG + chr7_1:79543154-79543173 Msa1041870:CDS 45.0%
AACAACTACCATCATCTGGG+GGG + chr7_1:79543204-79543223 Msa1041870:CDS 45.0%
!! GGGGGCATTCATCATTATCA+TGG + chr7_1:79543222-79543241 Msa1041870:CDS 45.0%
GAATGCTTGGGTAAGCCATT+AGG - chr7_1:79543320-79543339 None:intergenic 45.0%
ATTCAAATTCTTCGGCTGCG+AGG + chr7_1:79543336-79543355 Msa1041870:CDS 45.0%
! TTGCTGCTGTCCCGTAATTT+TGG - chr7_1:79543405-79543424 None:intergenic 45.0%
!! AGGTGAAGACTGTTCTGAAG+GGG - chr7_1:79543450-79543469 None:intergenic 45.0%
CGTATTGTTACTGGCACTGT+TGG - chr7_1:79543488-79543507 None:intergenic 45.0%
CCAAATTACGCATCGAAGGA+GGG - chr7_1:79543514-79543533 None:intergenic 45.0%
TCAGCCAAATTACGCATCGA+AGG - chr7_1:79543518-79543537 None:intergenic 45.0%
TGAACATTGGAACGAATGGC+AGG - chr7_1:79543617-79543636 None:intergenic 45.0%
TGCCATTCGTTCCAATGTTC+AGG + chr7_1:79543616-79543635 Msa1041870:CDS 45.0%
TCACAAGAGAAGGATATGCG+GGG + chr7_1:79543656-79543675 Msa1041870:CDS 45.0%
GAAATTAATGTGGTCGGGGA+AGG - chr7_1:79543953-79543972 None:intergenic 45.0%
ATTTGGAGAACCTAGTGACG+CGG - chr7_1:79543990-79544009 None:intergenic 45.0%
GAAGGCTGGAAAGAAGCAAA+AGG + chr7_1:79544045-79544064 Msa1041870:CDS 45.0%
CGATTGTTGGAGGAAGTAGA+TGG - chr7_1:79544082-79544101 None:intergenic 45.0%
TCTACTTCCTCCAACAATCG+CGG + chr7_1:79544082-79544101 Msa1041870:CDS 45.0%
AACTACAGTGCCAAGTGAGA+CGG + chr7_1:79544216-79544235 Msa1041870:CDS 45.0%
GAAACAGGAACTGAAGCAAC+TGG - chr7_1:79544292-79544311 None:intergenic 45.0%
AGCATCATCTGCCTCAATTC+TGG - chr7_1:79544338-79544357 None:intergenic 45.0%
GATGAACTCCCACATCATTG+CGG + chr7_1:79544478-79544497 Msa1041870:CDS 45.0%
CACAATCACCGCAATGATGT+GGG - chr7_1:79544489-79544508 None:intergenic 45.0%
GGTATGCAACATCAGATGAC+TGG + chr7_1:79544608-79544627 Msa1041870:CDS 45.0%
ACATCAGATGACTGGATTGC+TGG + chr7_1:79544616-79544635 Msa1041870:CDS 45.0%
TCTCGCTATCTGGATTGTTC+AGG - chr7_1:79544837-79544856 None:intergenic 45.0%
GAACAATCCAGATAGCGAGA+TGG + chr7_1:79544837-79544856 Msa1041870:CDS 45.0%
CTACTTTCCATCTCGCTATC+TGG - chr7_1:79544847-79544866 None:intergenic 45.0%
ATTGGACCTGCTCTTTATGC+AGG + chr7_1:79545032-79545051 Msa1041870:intron 45.0%
CATGTTCCTGCATAAAGAGC+AGG - chr7_1:79545041-79545060 None:intergenic 45.0%
CTTGTATTGCATTGGAGCCA+AGG + chr7_1:79545073-79545092 Msa1041870:three_prime_UTR 45.0%
TAGGAAAGCAGCTAAGGCAA+TGG - chr7_1:79545174-79545193 None:intergenic 45.0%
ACTGCTTAGGAAAGCAGCTA+AGG - chr7_1:79545180-79545199 None:intergenic 45.0%
! TGAAGATGACCTTGCTGTAC+CGG - chr7_1:79545382-79545401 None:intergenic 45.0%
GTAGCATAGCGCACAACATT+TGG - chr7_1:79545624-79545643 None:intergenic 45.0%
!! TATTATTATAATCAAATAAA+AGG - chr7_1:79540491-79540510 None:intergenic 5.0%
GCGATGGGCGATTACTATTG+GGG - chr7_1:79538656-79538675 None:intergenic 50.0%
CTGCGATGGGCGATTACTAT+TGG - chr7_1:79538658-79538677 None:intergenic 50.0%
GAGTAGAAGAAAGGCTGCGA+TGG - chr7_1:79538672-79538691 None:intergenic 50.0%
AATCGAGGTTTCTTCGCACC+TGG - chr7_1:79539045-79539064 None:intergenic 50.0%
GAGGTAGGTTGTTGTCGTTG+AGG - chr7_1:79539114-79539133 None:intergenic 50.0%
CAACGACAACAACCTACCTC+TGG + chr7_1:79539114-79539133 Msa1041870:CDS 50.0%
ACGACAACAACCTACCTCTG+GGG + chr7_1:79539116-79539135 Msa1041870:CDS 50.0%
GTTGCTACGATGTTGTCGTC+TGG + chr7_1:79539138-79539157 Msa1041870:CDS 50.0%
CTACGATGTTGTCGTCTGGT+AGG + chr7_1:79539142-79539161 Msa1041870:CDS 50.0%
TGAGTCACCAGCTCTTGATG+CGG - chr7_1:79539234-79539253 None:intergenic 50.0%
AGAGCTGGTGACTCAGTACA+AGG + chr7_1:79539239-79539258 Msa1041870:CDS 50.0%
!! TCGATTGCTGGTGCTGTTTG+TGG + chr7_1:79539348-79539367 Msa1041870:CDS 50.0%
ATCATCAGGCCAACCCAAGT+GGG - chr7_1:79539662-79539681 None:intergenic 50.0%
!! TTGGGTTGGCCTGATGATGT+TGG + chr7_1:79539664-79539683 Msa1041870:intron 50.0%
! TTGGCCTGATGATGTTGGCT+TGG + chr7_1:79539669-79539688 Msa1041870:intron 50.0%
!! TGGCCTGATGATGTTGGCTT+GGG + chr7_1:79539670-79539689 Msa1041870:intron 50.0%
!! ATGATGTTGGCTTGGGACCT+TGG + chr7_1:79539677-79539696 Msa1041870:intron 50.0%
! TTGAGGAGGAGCACAATCCA+AGG - chr7_1:79539697-79539716 None:intergenic 50.0%
TTGGATTGTGCTCCTCCTCA+AGG + chr7_1:79539696-79539715 Msa1041870:intron 50.0%
TCAAACCAGAGACCTTGAGG+AGG - chr7_1:79539711-79539730 None:intergenic 50.0%
GATTCTCCCCAGTACCAACT+TGG + chr7_1:79539729-79539748 Msa1041870:intron 50.0%
!! AGCCTACCCAAGTTGGTACT+GGG - chr7_1:79539739-79539758 None:intergenic 50.0%
!! TAGCCTACCCAAGTTGGTAC+TGG - chr7_1:79539740-79539759 None:intergenic 50.0%
TAGGTACCAGGTTTGGGTAC+TGG + chr7_1:79539941-79539960 Msa1041870:intron 50.0%
GTGGTGCTCTATCATTCTCC+TGG + chr7_1:79540016-79540035 Msa1041870:intron 50.0%
GGTGTTCGTGTGTATGACGT+GGG + chr7_1:79540099-79540118 Msa1041870:intron 50.0%
GTGTTCGTGTGTATGACGTG+GGG + chr7_1:79540100-79540119 Msa1041870:intron 50.0%
! GCTTTTGGTCACTTGGAACC+TGG - chr7_1:79540342-79540361 None:intergenic 50.0%
! GAAGGCAGCTTTTGGTCACT+TGG - chr7_1:79540349-79540368 None:intergenic 50.0%
GGAACTCAACTTCAATCCCG+CGG + chr7_1:79540870-79540889 Msa1041870:CDS 50.0%
AACTTCAATCCCGCGGTCAA+TGG + chr7_1:79540877-79540896 Msa1041870:CDS 50.0%
AGAAGCTGAACCATTGACCG+CGG - chr7_1:79540890-79540909 None:intergenic 50.0%
TTAAGCCTAGGATCCAGCCA+TGG - chr7_1:79541756-79541775 None:intergenic 50.0%
!! GTTCCTGAAAAGAGCATCGG+CGG + chr7_1:79541905-79541924 Msa1041870:CDS 50.0%
!! GGTTCAGGTGTTGGAAGAAC+CGG + chr7_1:79541974-79541993 Msa1041870:CDS 50.0%
GTGTTGGAAGAACCGGAAGT+AGG + chr7_1:79541981-79542000 Msa1041870:CDS 50.0%
AGAACCGGAAGTAGGCTCAT+TGG + chr7_1:79541989-79542008 Msa1041870:CDS 50.0%
! GGTGTTGCAGAGACCTTATC+CGG + chr7_1:79542013-79542032 Msa1041870:CDS 50.0%
GTGTTGCAGAGACCTTATCC+GGG + chr7_1:79542014-79542033 Msa1041870:CDS 50.0%
GGAGGAAGAGGAGTTCATGT+GGG + chr7_1:79542153-79542172 Msa1041870:CDS 50.0%
AGAGGAGTTCATGTGGGATG+AGG + chr7_1:79542159-79542178 Msa1041870:CDS 50.0%
ACAACTTGAGCTCAGACCCA+TGG + chr7_1:79542221-79542240 Msa1041870:CDS 50.0%
TGTCTTCATCGGCCATCCAT+GGG - chr7_1:79542240-79542259 None:intergenic 50.0%
TTGTCTTCATCGGCCATCCA+TGG - chr7_1:79542241-79542260 None:intergenic 50.0%
CAAAACCAGCCAGGGTGAAT+GGG - chr7_1:79542473-79542492 None:intergenic 50.0%
TCAAAACCAGCCAGGGTGAA+TGG - chr7_1:79542474-79542493 None:intergenic 50.0%
ATCATGGGAGTTGCAGAAGC+AGG + chr7_1:79543238-79543257 Msa1041870:CDS 50.0%
GTTGGAGACTGTTGTCGCAA+AGG - chr7_1:79543470-79543489 None:intergenic 50.0%
GGAGGGTTGCGTATTGTTAC+TGG - chr7_1:79543497-79543516 None:intergenic 50.0%
CCCTCCTTCGATGCGTAATT+TGG + chr7_1:79543511-79543530 Msa1041870:CDS 50.0%
GCCAAATTACGCATCGAAGG+AGG - chr7_1:79543515-79543534 None:intergenic 50.0%
ATTGGAACGAATGGCAGGCA+CGG - chr7_1:79543612-79543631 None:intergenic 50.0%
! AGCTGCTGTTGCTGAGGTTT+TGG - chr7_1:79543710-79543729 None:intergenic 50.0%
AAAACCTCAGCAACAGCAGC+TGG + chr7_1:79543709-79543728 Msa1041870:CDS 50.0%
AAACCTCAGCAACAGCAGCT+GGG + chr7_1:79543710-79543729 Msa1041870:CDS 50.0%
TTTAAGCCTACTCGGTCAGG+TGG + chr7_1:79543926-79543945 Msa1041870:CDS 50.0%
!!! TGCGGTAGTTTTGGCAGAGT+AGG - chr7_1:79544022-79544041 None:intergenic 50.0%
ACTCTGCCAAAACTACCGCA+AGG + chr7_1:79544022-79544041 Msa1041870:CDS 50.0%
CTCTGCCAAAACTACCGCAA+GGG + chr7_1:79544023-79544042 Msa1041870:CDS 50.0%
TTCTTTCCAGCCTTCCCTTG+CGG - chr7_1:79544040-79544059 None:intergenic 50.0%
GCGAAAGGTTTGATATCCGC+AGG + chr7_1:79544181-79544200 Msa1041870:CDS 50.0%
!! AGTTGCTGACTCTGTTCCTG+CGG - chr7_1:79544200-79544219 None:intergenic 50.0%
ACTGGGACAGCTGAAGAAAC+AGG - chr7_1:79544307-79544326 None:intergenic 50.0%
TGAGGCAGATGATGCTGCAA+AGG + chr7_1:79544342-79544361 Msa1041870:CDS 50.0%
TGATTGAGACAAGGCAAGCG+AGG - chr7_1:79544368-79544387 None:intergenic 50.0%
CCACAATCACCGCAATGATG+TGG - chr7_1:79544490-79544509 None:intergenic 50.0%
CCACATCATTGCGGTGATTG+TGG + chr7_1:79544487-79544506 Msa1041870:CDS 50.0%
AGATGACTGGATTGCTGGCA+AGG + chr7_1:79544621-79544640 Msa1041870:CDS 50.0%
CGGGAGTCAATTGGACACTA+TGG + chr7_1:79544708-79544727 Msa1041870:CDS 50.0%
AAGGGACGAGTGGATGTTCA+AGG + chr7_1:79544801-79544820 Msa1041870:CDS 50.0%
AGGGACGAGTGGATGTTCAA+GGG + chr7_1:79544802-79544821 Msa1041870:CDS 50.0%
GGGTACCCTTGATAAGCTTC+TGG - chr7_1:79545104-79545123 None:intergenic 50.0%
!! GAAGCTTATCAAGGGTACCC+AGG + chr7_1:79545104-79545123 Msa1041870:three_prime_UTR 50.0%
GGTCATCTTCATCCAAACGG+CGG + chr7_1:79545391-79545410 Msa1041870:three_prime_UTR 50.0%
AGAGAGAGAGAGAGAGGGAG+AGG - chr7_1:79538719-79538738 None:intergenic 55.0%
ATCGTAGCAACCCCAGAGGT+AGG - chr7_1:79539129-79539148 None:intergenic 55.0%
CAACATCGTAGCAACCCCAG+AGG - chr7_1:79539133-79539152 None:intergenic 55.0%
!! GAAAGTAGTGATGGTGGCGG+TGG + chr7_1:79539189-79539208 Msa1041870:CDS 55.0%
TCTGCGGCGAAATCGATTGC+TGG + chr7_1:79539336-79539355 Msa1041870:CDS 55.0%
CATCATCAGGCCAACCCAAG+TGG - chr7_1:79539663-79539682 None:intergenic 55.0%
GGTCCCAAGCCAACATCATC+AGG - chr7_1:79539676-79539695 None:intergenic 55.0%
TCCCCAGTACCAACTTGGGT+AGG + chr7_1:79539734-79539753 Msa1041870:intron 55.0%
!! GCCTACCCAAGTTGGTACTG+GGG - chr7_1:79539738-79539757 None:intergenic 55.0%
! GTACTGGCCCGGTATCCTAA+TGG + chr7_1:79539957-79539976 Msa1041870:intron 55.0%
GGGTGTTCGTGTGTATGACG+TGG + chr7_1:79540098-79540117 Msa1041870:intron 55.0%
! CTTTGCTGTCAGACTACCCG+AGG + chr7_1:79540423-79540442 Msa1041870:CDS 55.0%
GAAGCTGAACCATTGACCGC+GGG - chr7_1:79540889-79540908 None:intergenic 55.0%
AACGTCTTCAGCAGTCCAGC+AGG + chr7_1:79540992-79541011 Msa1041870:CDS 55.0%
ACGTCTTCAGCAGTCCAGCA+GGG + chr7_1:79540993-79541012 Msa1041870:CDS 55.0%
AGAGAGGCCAGATCGAGCTT+TGG + chr7_1:79541719-79541738 Msa1041870:CDS 55.0%
GAGAGGCCAGATCGAGCTTT+GGG + chr7_1:79541720-79541739 Msa1041870:CDS 55.0%
ACCGGAAGTAGGCTCATTGG+CGG + chr7_1:79541992-79542011 Msa1041870:CDS 55.0%
ACCGCCAATGAGCCTACTTC+CGG - chr7_1:79541996-79542015 None:intergenic 55.0%
CGGAGGAAGAGGAGTTCATG+TGG + chr7_1:79542152-79542171 Msa1041870:CDS 55.0%
ATGTGGGATGAGGTGAACCC+TGG + chr7_1:79542169-79542188 Msa1041870:CDS 55.0%
CTTGAGCTCAGACCCATGGA+TGG + chr7_1:79542225-79542244 Msa1041870:CDS 55.0%
GATGAATGCCCCCCAGATGA+TGG - chr7_1:79543215-79543234 None:intergenic 55.0%
TTGGAACGAATGGCAGGCAC+GGG - chr7_1:79543611-79543630 None:intergenic 55.0%
ACAGCAGCTGGGTTCTTCAC+AGG + chr7_1:79543721-79543740 Msa1041870:CDS 55.0%
CCACTCTTCACAGATGGAGC+TGG - chr7_1:79543842-79543861 None:intergenic 55.0%
CCAGCTCCATCTGTGAAGAG+TGG + chr7_1:79543839-79543858 Msa1041870:CDS 55.0%
GGGTTTAAGCCTACTCGGTC+AGG + chr7_1:79543923-79543942 Msa1041870:CDS 55.0%
GCCAAAACTACCGCAAGGGA+AGG + chr7_1:79544027-79544046 Msa1041870:CDS 55.0%
! GCCTTCCCTTGCGGTAGTTT+TGG - chr7_1:79544031-79544050 None:intergenic 55.0%
AAACTACCGCAAGGGAAGGC+TGG + chr7_1:79544031-79544050 Msa1041870:CDS 55.0%
TGATGCACCGCGATTGTTGG+AGG - chr7_1:79544092-79544111 None:intergenic 55.0%
AGCTGATGCACCGCGATTGT+TGG - chr7_1:79544095-79544114 None:intergenic 55.0%
GATCGCATCACCGTCTCACT+TGG - chr7_1:79544229-79544248 None:intergenic 55.0%
ACTGTCAGGAAAGGGACGAG+TGG + chr7_1:79544791-79544810 Msa1041870:CDS 55.0%
GGGACGAGTGGATGTTCAAG+GGG + chr7_1:79544803-79544822 Msa1041870:CDS 55.0%
GGACGAGTGGATGTTCAAGG+GGG + chr7_1:79544804-79544823 Msa1041870:CDS 55.0%
! TGCTGTACCGGTATCCCCAT+AGG - chr7_1:79545370-79545389 None:intergenic 55.0%
ATGGGGATACCGGTACAGCA+AGG + chr7_1:79545370-79545389 Msa1041870:three_prime_UTR 55.0%
CTTGATGCGGCGGTGGTTGA+GGG - chr7_1:79539221-79539240 None:intergenic 60.0%
TCTTGATGCGGCGGTGGTTG+AGG - chr7_1:79539222-79539241 None:intergenic 60.0%
GTCACCAGCTCTTGATGCGG+CGG - chr7_1:79539231-79539250 None:intergenic 60.0%
GTGCTCCTCCTCAAGGTCTC+TGG + chr7_1:79539703-79539722 Msa1041870:intron 60.0%
!! ACCAGGTTTGGGTACTGGCC+CGG + chr7_1:79539946-79539965 Msa1041870:intron 60.0%
CTTCAGCAGTCCAGCAGGGT+AGG + chr7_1:79540997-79541016 Msa1041870:intron 60.0%
GCAGCACCCAAAGCTCGATC+TGG - chr7_1:79541729-79541748 None:intergenic 60.0%
! CTTTGGGTGCTGCACGTCCA+TGG + chr7_1:79541736-79541755 Msa1041870:CDS 60.0%
CACGTCCATGGCTGGATCCT+AGG + chr7_1:79541748-79541767 Msa1041870:CDS 60.0%
! GCTCCGCCGATGCTCTTTTC+AGG - chr7_1:79541911-79541930 None:intergenic 60.0%
!! AAGAGCATCGGCGGAGCCTA+TGG + chr7_1:79541914-79541933 Msa1041870:CDS 60.0%
CAAGACCCATTCACCCTGGC+TGG + chr7_1:79542465-79542484 Msa1041870:intron 60.0%
GAACCCAGCTGCTGTTGCTG+AGG - chr7_1:79543716-79543735 None:intergenic 60.0%
GAAGGACCACCTGACCGAGT+AGG - chr7_1:79543935-79543954 None:intergenic 60.0%
TGGAGAACCTAGTGACGCGG+CGG - chr7_1:79543987-79544006 None:intergenic 60.0%
ACCACCGCCGCATCAAGAGC+TGG + chr7_1:79539224-79539243 Msa1041870:CDS 65.0%
ACCAGCTCTTGATGCGGCGG+TGG - chr7_1:79539228-79539247 None:intergenic 65.0%
ACCGGGCCAGTACCCAAACC+TGG - chr7_1:79539950-79539969 None:intergenic 65.0%
GGCGGAGCCTATGGAGACGA+TGG + chr7_1:79541923-79541942 Msa1041870:CDS 65.0%
GGAGAACCTAGTGACGCGGC+GGG - chr7_1:79543986-79544005 None:intergenic 65.0%
GATGCGGCGGTGGTTGAGGG+TGG - chr7_1:79539218-79539237 None:intergenic 70.0%
! GGGTGCTGCACGTCCATGGC+TGG + chr7_1:79541740-79541759 Msa1041870:CDS 70.0%
GGGTCTCCCGCCGCGTCACT+AGG + chr7_1:79543977-79543996 Msa1041870:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 79538598 79545645 79538598 ID=Msa1041870;Name=Msa1041870
chr7_1 mRNA 79538598 79545645 79538598 ID=Msa1041870-mRNA-1;Parent=Msa1041870;Name=Msa1041870-mRNA-1;_AED=0.02;_eAED=0.02;_QI=399|1|1|1|0.83|1|7|580|1026
chr7_1 exon 79538598 79539383 79538598 ID=Msa1041870-mRNA-1:exon:21466;Parent=Msa1041870-mRNA-1
chr7_1 exon 79540343 79540444 79540343 ID=Msa1041870-mRNA-1:exon:21467;Parent=Msa1041870-mRNA-1
chr7_1 exon 79540757 79541014 79540757 ID=Msa1041870-mRNA-1:exon:21468;Parent=Msa1041870-mRNA-1
chr7_1 exon 79541663 79541782 79541663 ID=Msa1041870-mRNA-1:exon:21469;Parent=Msa1041870-mRNA-1
chr7_1 exon 79541866 79542264 79541866 ID=Msa1041870-mRNA-1:exon:21470;Parent=Msa1041870-mRNA-1
chr7_1 exon 79543131 79544933 79543131 ID=Msa1041870-mRNA-1:exon:21471;Parent=Msa1041870-mRNA-1
chr7_1 exon 79545054 79545645 79545054 ID=Msa1041870-mRNA-1:exon:21472;Parent=Msa1041870-mRNA-1
chr7_1 five_prime_UTR 79538598 79538996 79538598 ID=Msa1041870-mRNA-1:five_prime_utr;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79538997 79539383 79538997 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79540343 79540444 79540343 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79540757 79541014 79540757 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79541663 79541782 79541663 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79541866 79542264 79541866 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79543131 79544933 79543131 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 CDS 79545054 79545065 79545054 ID=Msa1041870-mRNA-1:cds;Parent=Msa1041870-mRNA-1
chr7_1 three_prime_UTR 79545066 79545645 79545066 ID=Msa1041870-mRNA-1:three_prime_utr;Parent=Msa1041870-mRNA-1
Gene Sequence

>Msa1041870

ATGAACATGGAAAATTCTCGTAGATCTTTAGATAGATCGAGAGAACCAGGTGCGAAGAAACCTCGATTGATCGATGAGCTACAACAAGGTTCCAATCCAACTTCACGAACGTTTCCTCAACGACAACAACCTACCTCTGGGGTTGCTACGATGTTGTCGTCTGGTAGGTTTCGAATGAATGATAGAGACTCTGAAAGTAGTGATGGTGGCGGTGGTTACCACCCTCAACCACCGCCGCATCAAGAGCTGGTGACTCAGTACAAGGCTGCTCTTGCTGAGCTTACTTTTAACTCGAAACCGATAATTACTAATTTGACTATAATTGCTGGAGAGAATCTTTCTGCGGCGAAATCGATTGCTGGTGCTGTTTGTGGTAACATTCTTGAGGTTCCAAGTGACCAAAAGCTGCCTTCGCTTTATCTCTTAGACAGTATTGTTAAGAATATTGGGCGGGATTACATAAAATACTTTGCTGTCAGACTACCCGAGGTATTCTGCAATACATACAGACAGGTTGATACTCCTGTCCATTCAAGTATGAGGCATCTTTTTGGAACTTGGAGAGGAGTCTTTCCTCCTCAGACTCTTCAGATAATTGAGAAGGAACTCAACTTCAATCCCGCGGTCAATGGTTCAGCTTCTGCATCTGCTACCCTTAGAAGTGATTCTCAGTCTCAACGCCCATCTCATAGCATCCATGTGAATCCCAAATATTTAGAAAGGCAACGTCTTCAGCAGTCCAGCAGGACTAAAGGAGTATTTGATGATATGGCTGGAGTTATTTCAAATGCAAATGAAGACGCAGAGAGGCCAGATCGAGCTTTGGGTGCTGCACGTCCATGGCTGGATCCTAGGCTTAACATGCATAATAATCAGCATACTCATAGAGGTGCACTTAATGACTCTGTTCCTGAAAAGAGCATCGGCGGAGCCTATGGAGACGATGGATATAATTCTAGTGTTTCAAATAGTTTGGGTTCAGGTGTTGGAAGAACCGGAAGTAGGCTCATTGGCGGTGTTGCAGAGACCTTATCCGGGCAAAGAAATGGTTTCAGCCTCAAACATAGTTTTTCAAATCATGAAGCACCGAAGTCTGTGAATTTGGATGCACATAGCATAAGGAGCAGTGCAATGTCAAAGAACTGGAAAAATTCGGAGGAAGAGGAGTTCATGTGGGATGAGGTGAACCCTGGTTTGTCTGATAATGTACCTAATGTCTCTAACAACTTGAGCTCAGACCCATGGATGGCCGATGAAGACAATTTGGAAAGTGAAGATCACCTCCAAATCACACACCCAATTGGAACAAAGGTTAATAAAGGAATATCCACTGTTAAGAAACAACTACCATCATCTGGGGGGCATTCATCATTATCATGGGAGTTGCAGAAGCAGGTCCCAAGTGCCAAATTGAATATGAAGCCAGGTCACTCAGAAATATTTGTTTCTGCTCCTAATGGCTTACCCAAGCATTCAAATTCTTCGGCTGCGAGGATAAGAAATCAGTCTTCTATGCCGCATACAACAATAGGAATGTCCAAAATTACGGGACAGCAGCAATTTGATTCTGAGGGGACAGAGTCCCCTTCAGAACAGTCTTCACCTTTGCGACAACAGTCTCCAACAGTGCCAGTAACAATACGCAACCCTCCTTCGATGCGTAATTTGGCTGAGCAAGATTGTCCAACATCTCTTAAAACATCTCAACATTTGGGTGGTCTGCAAAGACAATATATTAGAGATCCCGTGCCTGCCATTCGTTCCAATGTTCAGGTTGGTAACTTGCGAAAATCACAAGAGAAGGATATGCGGGGTCCGTTATCTTTAGCAACTTCTTTTCAGCCAAAACCTCAGCAACAGCAGCTGGGTTCTTCACAGGCTGAAGTTACTCTTAAAGCTAAGCAGCCACTCAAATCTAAAGCTCCTTTAGTCAAAGCCAAAGTGACTTCAGAAAAGTCAACTACAAAGTGTCTTCCAGCTCCATCTGTGAAGAGTGGAATCATTCCCAATAAATCAATTACGAGAAGTCTGGATGCAAGTAACTGTCCATCTCAAATAGGGTTTAAGCCTACTCGGTCAGGTGGTCCTTCCCCGACCACATTAATTTCTTCGGGGTCTCCCGCCGCGTCACTAGGTTCTCCAAATGATTATTCACCTACTCTGCCAAAACTACCGCAAGGGAAGGCTGGAAAGAAGCAAAAGGATTCTACTCAACCATCTACTTCCTCCAACAATCGCGGTGCATCAGCTCCGAGCTCAAATACCGCCAATAAGAATACCTTGAATCCAATTTCAAATCTTTTAAGCTCGTTAGTTGCGAAAGGTTTGATATCCGCAGGAACAGAGTCAGCAACTACAGTGCCAAGTGAGACGGTGATGCGATCGAAAGACCAAACTGAAAGCATTGCTGTCAGTTCCTCTTTACCAGTTGCTTCAGTTCCTGTTTCTTCAGCTGTCCCAGTAAAATCTTCCAGAATTGAGGCAGATGATGCTGCAAAGGCCTCGCTTGCCTTGTCTCAATCAACTAGCACAGAAATTAGAAATCTCATTGGCTTTGATTTCAAACCTGATGTCATTCGAGAAATGCACCCACATGTAATCGAAGAATTATTGGATGAACTCCCACATCATTGCGGTGATTGTGGTATTAGGCTTAAACAACAAGAACAGTTTAATAGACACTTGGAATGGCATGCTACAAAAGAAAGAGAACAAAATGGTCTGATTGTAGCATCAAGAAGATGGTATGCAACATCAGATGACTGGATTGCTGGCAAGGCAGAATGTCTGTCTGAGTCTGAGTTTACTGATTCTGTAGATGAATATGATGATAATAAAACAGACGGGAGTCAATTGGACACTATGGTTGTAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTATACTGTCAGGAAAGGGACGAGTGGATGTTCAAGGGGGCTGTATACCTGAACAATCCAGATAGCGAGATGGAAAGTAGAAATGTGGGGCCCATCATTCATGCTAGATGCTTGTCAGATAACTCAATACTTGGTGTGACTAATACAGAACATGATTGA
Protein sequence

>Msa1041870

MNMENSRRSLDRSREPGAKKPRLIDELQQGSNPTSRTFPQRQQPTSGVATMLSSGRFRMNDRDSESSDGGGGYHPQPPPHQELVTQYKAALAELTFNSKPIITNLTIIAGENLSAAKSIAGAVCGNILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCNTYRQVDTPVHSSMRHLFGTWRGVFPPQTLQIIEKELNFNPAVNGSASASATLRSDSQSQRPSHSIHVNPKYLERQRLQQSSRTKGVFDDMAGVISNANEDAERPDRALGAARPWLDPRLNMHNNQHTHRGALNDSVPEKSIGGAYGDDGYNSSVSNSLGSGVGRTGSRLIGGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHSIRSSAMSKNWKNSEEEEFMWDEVNPGLSDNVPNVSNNLSSDPWMADEDNLESEDHLQITHPIGTKVNKGISTVKKQLPSSGGHSSLSWELQKQVPSAKLNMKPGHSEIFVSAPNGLPKHSNSSAARIRNQSSMPHTTIGMSKITGQQQFDSEGTESPSEQSSPLRQQSPTVPVTIRNPPSMRNLAEQDCPTSLKTSQHLGGLQRQYIRDPVPAIRSNVQVGNLRKSQEKDMRGPLSLATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCLPAPSVKSGIIPNKSITRSLDASNCPSQIGFKPTRSGGPSPTTLISSGSPAASLGSPNDYSPTLPKLPQGKAGKKQKDSTQPSTSSNNRGASAPSSNTANKNTLNPISNLLSSLVAKGLISAGTESATTVPSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEADDAAKASLALSQSTSTEIRNLIGFDFKPDVIREMHPHVIEELLDELPHHCGDCGIRLKQQEQFNRHLEWHATKEREQNGLIVASRRWYATSDDWIAGKAECLSESEFTDSVDEYDDNKTDGSQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGAVYLNNPDSEMESRNVGPIIHARCLSDNSILGVTNTEHD*