AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1124940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1124940 MtrunA17_Chr7g0265781 97.374 1028 25 1 1 1026 1 1028 0.0 2055
Msa1124940 MtrunA17_Chr1g0179281 54.900 1051 417 21 3 1026 1 1021 0.0 1025
Msa1124940 MtrunA17_Chr6g0452881 37.534 365 175 10 78 402 37 388 8.89e-58 214
Msa1124940 MtrunA17_Chr6g0452881 36.207 174 105 4 847 1016 645 816 2.16e-30 129
Msa1124940 MtrunA17_Chr4g0037071 33.908 174 109 4 847 1016 15 186 2.41e-26 108
Msa1124940 MtrunA17_Chr6g0452891 34.118 170 79 7 853 1013 72 217 4.11e-22 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1124940 AT2G36480.2 50.000 458 187 12 3 428 1 448 1.07e-119 390
Msa1124940 AT2G36480.2 40.574 244 134 4 774 1017 716 948 8.35e-47 182
Msa1124940 AT2G36480.1 50.000 458 187 12 3 428 1 448 1.07e-119 390
Msa1124940 AT2G36480.1 40.574 244 134 4 774 1017 716 948 8.35e-47 182
Msa1124940 AT4G04885.1 37.500 400 185 13 21 399 9 364 5.86e-57 212
Msa1124940 AT4G04885.1 38.012 171 90 5 850 1011 625 788 7.01e-32 134
Msa1124940 AT1G66500.1 32.558 172 96 6 850 1012 227 387 4.51e-22 100
Msa1124940 AT5G43620.1 32.386 176 92 6 850 1012 220 381 1.00e-21 99.8

Find 321 sgRNAs with CRISPR-Local

Find 566 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTGCCTTTCTAAATATT+TGG 0.133248 7_3:+76200005 None:intergenic
ACTTCTCGTAATTGATTTAT+TGG 0.142148 7_3:+76197109 None:intergenic
TTGCTGCTGTCCCGTAATTT+TGG 0.160595 7_3:+76197577 None:intergenic
GACAGTATTGTTAAGAATAT+TGG 0.166316 7_3:-76200597 Msa1124940:CDS
AGCTGCTGTTGCTGAGGTTT+TGG 0.194493 7_3:+76197272 None:intergenic
TGTCAAATCTACACATTCTT+TGG 0.195787 7_3:-76195496 Msa1124940:three_prime_UTR
TGGATTCAAGGTATTCTTAT+TGG 0.211269 7_3:+76196848 None:intergenic
CTAATTCTAACACTAAAATT+TGG 0.212454 7_3:+76202023 None:intergenic
CCCTCCTTCGATGCGTAATT+TGG 0.215915 7_3:-76197468 Msa1124940:CDS
ACCTGGCTTCATATTCAATT+TGG 0.235053 7_3:+76197709 None:intergenic
TTTATGCAGCTGATAAATTA+AGG 0.237610 7_3:+76195418 None:intergenic
TTTCCTCAAGTACAACAAAA+AGG 0.247972 7_3:+76195763 None:intergenic
ACATGTAATCGAAGAATTAT+TGG 0.248282 7_3:-76196523 Msa1124940:CDS
TTCTAGTGTTTCAAATAGTT+TGG 0.249454 7_3:-76199027 Msa1124940:CDS
GAGCTTAAAAGATTTGAAAT+TGG 0.266321 7_3:+76196828 None:intergenic
TCTTAAAACATCTCAACATT+TGG 0.272228 7_3:-76197423 Msa1124940:CDS
TTATTAACCTTTGTTCCAAT+TGG 0.272469 7_3:+76197818 None:intergenic
CCCGACCACATTAATTTCTT+CGG 0.274359 7_3:-76197024 Msa1124940:CDS
CTACTTTCCATCTCGCTATC+TGG 0.283979 7_3:+76196135 None:intergenic
AGTAACTGTCCATCTCAAAT+AGG 0.286697 7_3:-76197077 Msa1124940:CDS
CGTTGCCTTTCTAAATATTT+GGG 0.287620 7_3:+76200006 None:intergenic
CCGACCACATTAATTTCTTC+GGG 0.290620 7_3:-76197023 Msa1124940:CDS
TGCCATTCGTTCCAATGTTC+AGG 0.291207 7_3:-76197363 Msa1124940:CDS
ATCAATATGAATTGGGGATT+AGG 0.292412 7_3:-76202197 Msa1124940:five_prime_UTR
TCAATATGAATTGGGGATTA+GGG 0.294331 7_3:-76202196 Msa1124940:five_prime_UTR
GCCTTCCCTTGCGGTAGTTT+TGG 0.294785 7_3:+76196951 None:intergenic
AGCACCGAAGTCTGTGAATT+TGG 0.302197 7_3:-76198898 Msa1124940:CDS
ATAGTCAAATTAGTAATTAT+CGG 0.306134 7_3:+76201683 None:intergenic
ATTCATTCATCAATATGAAT+TGG 0.311937 7_3:-76202205 Msa1124940:five_prime_UTR
ACAGTATTGTTAAGAATATT+GGG 0.313571 7_3:-76200596 Msa1124940:CDS
GGAGGGTTGCGTATTGTTAC+TGG 0.318530 7_3:+76197485 None:intergenic
GGGTACCCTTGATAAGCTTC+TGG 0.325665 7_3:+76195878 None:intergenic
TTCATTCATCAATATGAATT+GGG 0.326097 7_3:-76202204 Msa1124940:five_prime_UTR
GAGACTGAGAATCACTTCTA+AGG 0.328918 7_3:+76200058 None:intergenic
TTCCAATTGGGTGTGTGATT+TGG 0.329546 7_3:+76197831 None:intergenic
ATTGCGGTGATTGTGGTATT+AGG 0.330585 7_3:-76196485 Msa1124940:CDS
CTTCTCGTAATTGATTTATT+GGG 0.331979 7_3:+76197110 None:intergenic
TGCGATGGGCGATTACTATT+GGG 0.334473 7_3:+76202340 None:intergenic
AATAGGAATGTCCAAAATTA+CGG 0.342563 7_3:-76197588 Msa1124940:CDS
GTCAAATCTACACATTCTTT+GGG 0.350866 7_3:-76195495 Msa1124940:three_prime_UTR
TATTAACCTTTGTTCCAATT+GGG 0.351939 7_3:+76197819 None:intergenic
TAAAGGAGTATTTGATGATA+TGG 0.354621 7_3:-76199314 Msa1124940:CDS
GATGGCCGATGAAGACAATT+TGG 0.356986 7_3:-76198736 Msa1124940:intron
ACCATTTCTTTGCCCGGATA+AGG 0.361597 7_3:+76198953 None:intergenic
CTTGATGCGGCGGTGGTTGA+GGG 0.366523 7_3:+76201759 None:intergenic
AAGATTTGAAATTGGATTCA+AGG 0.366649 7_3:+76196836 None:intergenic
GTTTCAAATAGTTTGGGTTC+AGG 0.366649 7_3:-76199020 Msa1124940:CDS
ATATTTGTTTCTGCTCCTAA+TGG 0.366883 7_3:-76197677 Msa1124940:CDS
GATAAAGCGAAGGCAGCTTT+TGG 0.368771 7_3:+76200625 None:intergenic
GAATGCTTGGGTAAGCCATT+AGG 0.372033 7_3:+76197662 None:intergenic
ACTAATTTGACTATAATTGC+TGG 0.373637 7_3:-76201674 Msa1124940:CDS
GGTGTTGCAGAGACCTTATC+CGG 0.374381 7_3:-76198966 Msa1124940:CDS
TGAGGAAACGTTCGTGAAGT+TGG 0.376740 7_3:+76201884 None:intergenic
AGCCGAAGAATTTGAATGCT+TGG 0.380657 7_3:+76197649 None:intergenic
CTTAAAACATCTCAACATTT+GGG 0.380724 7_3:-76197422 Msa1124940:CDS
ATTGGAACAAAGGTTAATAA+AGG 0.381415 7_3:-76197815 Msa1124940:CDS
GGGTGCTGCACGTCCATGGC+TGG 0.382360 7_3:-76199239 Msa1124940:CDS
TCTTGATGCGGCGGTGGTTG+AGG 0.387175 7_3:+76201758 None:intergenic
TCTAGTGTTTCAAATAGTTT+GGG 0.389260 7_3:-76199026 Msa1124940:CDS
CAAAATTTGTTTGACTGCTT+AGG 0.389354 7_3:+76195789 None:intergenic
AGCATCATCTGCCTCAATTC+TGG 0.390784 7_3:+76196644 None:intergenic
ACCCAAGCATTCAAATTCTT+CGG 0.397635 7_3:-76197651 Msa1124940:CDS
TGACAGCAATGCTTTCAGTT+TGG 0.399143 7_3:+76196724 None:intergenic
GCATAATATTATCCGCCGTT+TGG 0.399325 7_3:+76195570 None:intergenic
AAGAAACAACTACCATCATC+TGG 0.401863 7_3:-76197779 Msa1124940:CDS
TCTGCGGCGAAATCGATTGC+TGG 0.405177 7_3:-76201641 Msa1124940:CDS
GTCACTTTGGCTTTGACTAA+AGG 0.406869 7_3:+76197191 None:intergenic
GAGAGGCCAGATCGAGCTTT+GGG 0.416284 7_3:-76199259 Msa1124940:CDS
TCTATGCCGCATACAACAAT+AGG 0.416550 7_3:-76197605 Msa1124940:CDS
ATTTGCATATTTAACACCTA+TGG 0.416585 7_3:-76195638 Msa1124940:intron
ATTCATATTGATGAATGAAT+GGG 0.418307 7_3:+76202208 None:intergenic
AAAACCTCAGCAACAGCAGC+TGG 0.418357 7_3:-76197270 Msa1124940:CDS
ACTGGGACAGCTGAAGAAAC+AGG 0.419209 7_3:+76196675 None:intergenic
AGAGAGGCCAGATCGAGCTT+TGG 0.423688 7_3:-76199260 Msa1124940:CDS
ACAAAAGAAAGAGAACAAAA+TGG 0.424354 7_3:-76196417 Msa1124940:CDS
AATTCATATTGATGAATGAA+TGG 0.425384 7_3:+76202207 None:intergenic
TAAATCAATTACGAGAAGTC+TGG 0.426887 7_3:-76197105 Msa1124940:CDS
CAATTGGGTGTGTGATTTGG+AGG 0.427496 7_3:+76197834 None:intergenic
TAAAACAGACGGGAGTCAAT+TGG 0.428390 7_3:-76196280 Msa1124940:CDS
ATTCATAACTTGTATTGCAT+TGG 0.428430 7_3:-76195914 Msa1124940:three_prime_UTR
CCGAAGAAATTAATGTGGTC+GGG 0.430521 7_3:+76197024 None:intergenic
ACCTTATCCGGGCAAAGAAA+TGG 0.430710 7_3:-76198954 Msa1124940:CDS
TCTCGCTATCTGGATTGTTC+AGG 0.430835 7_3:+76196145 None:intergenic
CTCCAAATCACACACCCAAT+TGG 0.432800 7_3:-76197833 Msa1124940:CDS
TGCATTTCTCGAATGACATC+AGG 0.434562 7_3:+76196549 None:intergenic
GCCGAAGAATTTGAATGCTT+GGG 0.436198 7_3:+76197650 None:intergenic
AGCTGATGCACCACGATTGT+TGG 0.437300 7_3:+76196887 None:intergenic
TTCATATTCAATTTGGCACT+TGG 0.438918 7_3:+76197716 None:intergenic
GGGTTTAAGCCTACTCGGTC+AGG 0.439200 7_3:-76197056 Msa1124940:CDS
GTAACTGTCCATCTCAAATA+GGG 0.440250 7_3:-76197076 Msa1124940:CDS
CGTTGCATACTAAAACTAGA+TGG 0.443364 7_3:-76195848 Msa1124940:three_prime_UTR
ACATCAGATGACTGGATTGC+TGG 0.443441 7_3:-76196363 Msa1124940:CDS
TTTAGTATGCAACGAGAACC+TGG 0.444406 7_3:+76195857 None:intergenic
GGTTCAGGTGTTGGAAGAAC+CGG 0.446940 7_3:-76199005 Msa1124940:CDS
AAGAGCATCGGCGGAGCCTA+TGG 0.447109 7_3:-76199065 Msa1124940:CDS
GCAGTGCAATGTCAAAGAAC+TGG 0.449666 7_3:-76198857 Msa1124940:CDS
CAACGACAACAACCTACCTC+TGG 0.451366 7_3:-76201863 Msa1124940:CDS
CACGTCCATGGCTGGATCCT+AGG 0.451919 7_3:-76199231 Msa1124940:CDS
CTTTGGGTGCTGCACGTCCA+TGG 0.452816 7_3:-76199243 Msa1124940:CDS
GCAGCACCCAAAGCTCGATC+TGG 0.453817 7_3:+76199253 None:intergenic
AGAGTAGGTGAATAATCATT+TGG 0.453893 7_3:+76196975 None:intergenic
GTAGCATAGCGCACAACATT+TGG 0.454690 7_3:+76195353 None:intergenic
CGATTGTTGGAGGAAGTAGA+TGG 0.455761 7_3:+76196900 None:intergenic
CTCAAGTTGTTAGAGACATT+AGG 0.457050 7_3:+76198771 None:intergenic
AATCATTTCACCTACCCTGC+TGG 0.462666 7_3:+76199972 None:intergenic
TCGATTGCTGGTGCTGTTTG+TGG 0.463089 7_3:-76201629 Msa1124940:CDS
TTTGCATATTTAACACCTAT+GGG 0.466087 7_3:-76195637 Msa1124940:intron
AACGTCTTCAGCAGTCCAGC+AGG 0.469296 7_3:-76199987 Msa1124940:CDS
GAGAGGTGAAAGAGAAAAGA+GGG 0.469958 7_3:+76202295 None:intergenic
ACCAGCTCTTGATGCGGCGG+TGG 0.470882 7_3:+76201752 None:intergenic
AGAGGAGTTCATGTGGGATG+AGG 0.471007 7_3:-76198820 Msa1124940:CDS
CTTGTATTGCATTGGAGCCA+AGG 0.471717 7_3:-76195906 Msa1124940:three_prime_UTR
AACTTCAATCCCGCGGTCAA+TGG 0.473692 7_3:-76200102 Msa1124940:CDS
ACAGAAATTAGAAATCTCAT+TGG 0.476065 7_3:-76196585 Msa1124940:CDS
ATAAGCTTCTGGCTTAACCT+TGG 0.478038 7_3:+76195889 None:intergenic
GAGTAGAAGAAAGGCTGCGA+TGG 0.479165 7_3:+76202325 None:intergenic
CTCCTGTCCATTCAAGTATG+AGG 0.480383 7_3:-76200191 Msa1124940:CDS
ATCACAAGAGAAGGATATGC+GGG 0.481020 7_3:-76197324 Msa1124940:CDS
AATAGTTTGGGTTCAGGTGT+TGG 0.482447 7_3:-76199014 Msa1124940:CDS
AAACTACCGCAAGGGAAGGC+TGG 0.484966 7_3:-76196948 Msa1124940:CDS
TTGTCTTCATCGGCCATCCA+TGG 0.488246 7_3:+76198741 None:intergenic
ACAAAAGAAAATCAAAGGAG+TGG 0.488685 7_3:+76195516 None:intergenic
CTACGATGTTGTCGTCTGGT+AGG 0.491431 7_3:-76201835 Msa1124940:CDS
CACAACATTTGGTCAAATGT+TGG 0.491776 7_3:+76195364 None:intergenic
TGAATCCCAAATATTTAGAA+AGG 0.497212 7_3:-76200011 Msa1124940:CDS
GAAACAGGAACTGAAGCAAC+TGG 0.498254 7_3:+76196690 None:intergenic
AAACGTTCGTGAAGTTGGAT+TGG 0.499805 7_3:+76201889 None:intergenic
AAGGGACGAGTGGATGTTCA+AGG 0.500865 7_3:-76196178 Msa1124940:CDS
AGATGACTGGATTGCTGGCA+AGG 0.501201 7_3:-76196358 Msa1124940:CDS
AAAGATGCCTCATACTTGAA+TGG 0.503245 7_3:+76200184 None:intergenic
ACAGCAGCTGGGTTCTTCAC+AGG 0.503314 7_3:-76197258 Msa1124940:CDS
ATAGGAATGTCCAAAATTAC+GGG 0.506569 7_3:-76197587 Msa1124940:CDS
CGTATTGTTACTGGCACTGT+TGG 0.506761 7_3:+76197494 None:intergenic
CGGGAGTCAATTGGACACTA+TGG 0.507853 7_3:-76196271 Msa1124940:CDS
GCTGAAACCATTTCTTTGCC+CGG 0.508129 7_3:+76198947 None:intergenic
AAAGAAGTTGCTAAAGATAA+CGG 0.508160 7_3:+76197299 None:intergenic
AACTGAAGCAACTGGTAAAG+AGG 0.508176 7_3:+76196698 None:intergenic
CTAAATATTTGGGATTCACA+TGG 0.508383 7_3:+76200016 None:intergenic
GTTAAGCCAGAAGCTTATCA+AGG 0.511104 7_3:-76195884 Msa1124940:three_prime_UTR
AATCGAGGTTTCTTCGCACC+TGG 0.512088 7_3:+76201935 None:intergenic
GCCAAATTGAATATGAAGCC+AGG 0.515735 7_3:-76197710 Msa1124940:CDS
TCATATTCAATTTGGCACTT+GGG 0.516765 7_3:+76197717 None:intergenic
GGCTTAAACCCTATTTGAGA+TGG 0.516828 7_3:+76197068 None:intergenic
ACCGCCAATGAGCCTACTTC+CGG 0.517406 7_3:+76198986 None:intergenic
ATCATGGGAGTTGCAGAAGC+AGG 0.518761 7_3:-76197741 Msa1124940:CDS
CAAGTTACCAACCTGAACAT+TGG 0.518895 7_3:+76197352 None:intergenic
ATTTGAAGATGTATACTGTC+AGG 0.519071 7_3:-76196202 Msa1124940:CDS
AGTAAAATCTTCCAGAATTG+AGG 0.520874 7_3:-76196655 Msa1124940:CDS
GGAGTATTTGATGATATGGC+TGG 0.521125 7_3:-76199310 Msa1124940:CDS
CAAAAGAAAATCAAAGGAGT+GGG 0.522899 7_3:+76195517 None:intergenic
AGAGAGGTGAAAGAGAAAAG+AGG 0.524383 7_3:+76202294 None:intergenic
GATCGCATCACCGTCTCACT+TGG 0.525025 7_3:+76196753 None:intergenic
GAAATTAATGTGGTCGGGGA+AGG 0.526098 7_3:+76197029 None:intergenic
CCACATCATTGCGGTGATTG+TGG 0.527976 7_3:-76196492 Msa1124940:CDS
AGAACCGGAAGTAGGCTCAT+TGG 0.529221 7_3:-76198990 Msa1124940:CDS
CACACAATACACACAAGCAT+TGG 0.529437 7_3:+76196232 None:intergenic
AACGACAACAACCTACCTCT+GGG 0.529457 7_3:-76201862 Msa1124940:CDS
GCCAAATTACGCATCGAAGG+AGG 0.530494 7_3:+76197467 None:intergenic
ATTGGAACGAATGGCAGGCA+CGG 0.530926 7_3:+76197370 None:intergenic
CCCGAAGAAATTAATGTGGT+CGG 0.531341 7_3:+76197023 None:intergenic
CCACTCTTCACAGATGGAGC+TGG 0.531578 7_3:+76197140 None:intergenic
GCTTACCAAATTGTCTTCAT+CGG 0.532183 7_3:+76198731 None:intergenic
ATTCAAGGTATTCTTATTGG+CGG 0.532457 7_3:+76196851 None:intergenic
ATTTGGATGCACATAGCATA+AGG 0.533715 7_3:-76198881 Msa1124940:CDS
ACTGCTTAGGAAAGCAGCTA+AGG 0.533771 7_3:+76195802 None:intergenic
TTATTGGCGGTATTTGAGCT+CGG 0.534346 7_3:+76196864 None:intergenic
GCGAAAGGTTTGATATCCGC+AGG 0.535645 7_3:-76196798 Msa1124940:CDS
CAAGCATCTAGCATGAATGA+TGG 0.535680 7_3:+76196101 None:intergenic
GGTATGCAACATCAGATGAC+TGG 0.539121 7_3:-76196371 Msa1124940:CDS
ACCACCGCCGCATCAAGAGC+TGG 0.540585 7_3:-76201753 Msa1124940:CDS
ACAGCAGCAATTTGATTCTG+AGG 0.540664 7_3:-76197564 Msa1124940:CDS
AGAAACAACTACCATCATCT+GGG 0.543785 7_3:-76197778 Msa1124940:CDS
TCATTCATCAATATGAATTG+GGG 0.544901 7_3:-76202203 Msa1124940:five_prime_UTR
TTAAGCTCGTTAGTTGCGAA+AGG 0.545105 7_3:-76196813 Msa1124940:CDS
TTCACATGGATGCTATGAGA+TGG 0.547527 7_3:+76200030 None:intergenic
AATAATTCTTCGATTACATG+TGG 0.547916 7_3:+76196525 None:intergenic
TGTCTTCATCGGCCATCCAT+GGG 0.548954 7_3:+76198742 None:intergenic
GGATCGAGAGAGTAGAAGAA+AGG 0.551115 7_3:+76202316 None:intergenic
ATTATATCCATCGTCTCCAT+AGG 0.554348 7_3:+76199049 None:intergenic
CAAGGTCATCTTCATCCAAA+CGG 0.554505 7_3:-76195585 Msa1124940:three_prime_UTR
TGAACATTGGAACGAATGGC+AGG 0.555403 7_3:+76197365 None:intergenic
AATAATCAGCATACTCATAG+AGG 0.555522 7_3:-76199113 Msa1124940:CDS
AGATGTATACTGTCAGGAAA+GGG 0.555729 7_3:-76196196 Msa1124940:CDS
AGTAGAAGAAAGGCTGCGAT+GGG 0.555771 7_3:+76202326 None:intergenic
GACATTCCTATTGTTGTATG+CGG 0.557470 7_3:+76197599 None:intergenic
AAGGTGAAGACTGTTCTGAA+GGG 0.558749 7_3:+76197531 None:intergenic
AACCTGAACATTGGAACGAA+TGG 0.559123 7_3:+76197361 None:intergenic
AAAGGTGAAGACTGTTCTGA+AGG 0.560794 7_3:+76197530 None:intergenic
CAGCAGCAATTTGATTCTGA+GGG 0.562116 7_3:-76197563 Msa1124940:CDS
TATGATGATAATAAAACAGA+CGG 0.562220 7_3:-76196291 Msa1124940:CDS
CCAAATTACGCATCGAAGGA+GGG 0.563230 7_3:+76197468 None:intergenic
ATGATTCCACTCTTCACAGA+TGG 0.563534 7_3:+76197134 None:intergenic
TTGGAACGAATGGCAGGCAC+GGG 0.563880 7_3:+76197371 None:intergenic
TGATGCACCACGATTGTTGG+AGG 0.564054 7_3:+76196890 None:intergenic
TGATTGTAGCATCAAGAAGA+TGG 0.565765 7_3:-76196392 Msa1124940:CDS
TGCCTCATACTTGAATGGAC+AGG 0.566930 7_3:+76200189 None:intergenic
TCCGCTTATTGATTCTTGTG+CGG 0.567413 7_3:+76202088 None:intergenic
GTTGCTACGATGTTGTCGTC+TGG 0.567550 7_3:-76201839 Msa1124940:CDS
CACACACCCAATTGGAACAA+AGG 0.567583 7_3:-76197825 Msa1124940:CDS
TATTGTTAAGAATATTGGGC+GGG 0.568077 7_3:-76200592 Msa1124940:CDS
CCACAATCACCGCAATGATG+TGG 0.571121 7_3:+76196492 None:intergenic
CGAAGAAATTAATGTGGTCG+GGG 0.572323 7_3:+76197025 None:intergenic
ATTCGTTCCAATGTTCAGGT+TGG 0.573224 7_3:-76197359 Msa1124940:CDS
GTCACCAGCTCTTGATGCGG+CGG 0.573740 7_3:+76201749 None:intergenic
CGAGATGGAAAGTAGAAATG+TGG 0.573826 7_3:-76196127 Msa1124940:CDS
GCATCCAAATTCACAGACTT+CGG 0.574943 7_3:+76198894 None:intergenic
TTGTCAGATAACTCAATACT+TGG 0.575179 7_3:-76196081 Msa1124940:CDS
TGAGGCAGATGATGCTGCAA+AGG 0.575199 7_3:-76196637 Msa1124940:CDS
AGACTGAGAATCACTTCTAA+GGG 0.576385 7_3:+76200059 None:intergenic
TCACATGGATGCTATGAGAT+GGG 0.576495 7_3:+76200031 None:intergenic
CTTGCGAAAATCACAAGAGA+AGG 0.578295 7_3:-76197333 Msa1124940:CDS
CACAATCACCGCAATGATGT+GGG 0.578357 7_3:+76196493 None:intergenic
AAAGGAGCTTTAGATTTGAG+TGG 0.579334 7_3:+76197209 None:intergenic
ACCGGAAGTAGGCTCATTGG+CGG 0.579906 7_3:-76198987 Msa1124940:CDS
GAAAGTAGTGATGGTGGCGG+TGG 0.581623 7_3:-76201788 Msa1124940:CDS
AAGCATCTAGCATGAATGAT+GGG 0.581668 7_3:+76196102 None:intergenic
AAGATGTATACTGTCAGGAA+AGG 0.582076 7_3:-76196197 Msa1124940:CDS
GAACCCAGCTGCTGTTGCTG+AGG 0.583698 7_3:+76197266 None:intergenic
GAAGGCTGGAAAGAAGCAAA+AGG 0.584037 7_3:-76196934 Msa1124940:CDS
GGAGAACCTAGTGACGCGGC+GGG 0.584551 7_3:+76196996 None:intergenic
TGGTAGTTGTTTCTTAACAG+TGG 0.585131 7_3:+76197787 None:intergenic
GAGATGGAAAGTAGAAATGT+GGG 0.585552 7_3:-76196126 Msa1124940:CDS
TGTTTGTGGTAACATTCTTG+AGG 0.586608 7_3:-76201615 Msa1124940:intron
GCGATGGGCGATTACTATTG+GGG 0.587332 7_3:+76202341 None:intergenic
ATGTGGGATGAGGTGAACCC+TGG 0.587853 7_3:-76198810 Msa1124940:CDS
AGAACAGTTTAATAGACACT+TGG 0.587882 7_3:-76196451 Msa1124940:CDS
GGCGGAGCCTATGGAGACGA+TGG 0.591159 7_3:-76199056 Msa1124940:CDS
ATTTGACAAAAGAAAATCAA+AGG 0.591890 7_3:+76195511 None:intergenic
GGGACGAGTGGATGTTCAAG+GGG 0.591895 7_3:-76196176 Msa1124940:CDS
GTGTTGGAAGAACCGGAAGT+AGG 0.595103 7_3:-76198998 Msa1124940:CDS
ACAAATATTTCTGAGTGACC+TGG 0.595652 7_3:+76197692 None:intergenic
AATCTACACATTCTTTGGGA+GGG 0.595704 7_3:-76195491 Msa1124940:three_prime_UTR
CATACATGCATGTTAAGCCT+AGG 0.595796 7_3:+76199214 None:intergenic
TCAATTATCTGAAGAGTCTG+AGG 0.595989 7_3:+76200135 None:intergenic
AAATCTACACATTCTTTGGG+AGG 0.596307 7_3:-76195492 Msa1124940:three_prime_UTR
GACTCTTCAGATAATTGAGA+AGG 0.596715 7_3:-76200130 Msa1124940:CDS
CGACCACATTAATTTCTTCG+GGG 0.597538 7_3:-76197022 Msa1124940:CDS
TTCTTTCCAGCCTTCCCTTG+CGG 0.598633 7_3:+76196942 None:intergenic
AAATAGGGTTTAAGCCTACT+CGG 0.599873 7_3:-76197061 Msa1124940:CDS
CCAGCTCCATCTGTGAAGAG+TGG 0.601958 7_3:-76197140 Msa1124940:CDS
GAAGCTGAACCATTGACCGC+GGG 0.604224 7_3:+76200093 None:intergenic
GGTACATTATCAGACAAACC+AGG 0.604517 7_3:+76198792 None:intergenic
TAGGAAAGCAGCTAAGGCAA+TGG 0.605790 7_3:+76195808 None:intergenic
ATTCTGCAATACATACAGAC+AGG 0.606020 7_3:-76200220 Msa1124940:CDS
TTAGATAGATCGAGAGAACC+AGG 0.607166 7_3:-76201953 Msa1124940:CDS
ACAACTTGAGCTCAGACCCA+TGG 0.607186 7_3:-76198758 Msa1124940:CDS
AGGGACGAGTGGATGTTCAA+GGG 0.609571 7_3:-76196177 Msa1124940:CDS
CTCTGCCAAAACTACCGCAA+GGG 0.611035 7_3:-76196956 Msa1124940:CDS
GCCAAAACTACCGCAAGGGA+AGG 0.612070 7_3:-76196952 Msa1124940:CDS
TCTGTTCCTGAAAAGAGCAT+CGG 0.616052 7_3:-76199077 Msa1124940:CDS
ATGATGATAATAAAACAGAC+GGG 0.617056 7_3:-76196290 Msa1124940:CDS
CGGAGGAAGAGGAGTTCATG+TGG 0.617778 7_3:-76198827 Msa1124940:CDS
AAAACATCTCAACATTTGGG+TGG 0.617967 7_3:-76197419 Msa1124940:CDS
AAAGAAAATCAAAGGAGTGG+GGG 0.618293 7_3:+76195519 None:intergenic
GAAGCTTATCAAGGGTACCC+AGG 0.619064 7_3:-76195875 Msa1124940:three_prime_UTR
ACTCTGCCAAAACTACCGCA+AGG 0.619475 7_3:-76196957 Msa1124940:CDS
TCCGCACAAGAATCAATAAG+CGG 0.621141 7_3:-76202089 Msa1124940:five_prime_UTR
AACTACAGTGCCAAGTGAGA+CGG 0.621357 7_3:-76196763 Msa1124940:CDS
AGGTGAAGACTGTTCTGAAG+GGG 0.621418 7_3:+76197532 None:intergenic
AAACCTCAGCAACAGCAGCT+GGG 0.621875 7_3:-76197269 Msa1124940:CDS
TTTAAGCCTACTCGGTCAGG+TGG 0.622249 7_3:-76197053 Msa1124940:CDS
AGAGCTGGTGACTCAGTACA+AGG 0.624110 7_3:-76201738 Msa1124940:CDS
GACTCTGAAAGTAGTGATGG+TGG 0.625930 7_3:-76201794 Msa1124940:CDS
GTTGGAGACTGTTGTCGCAA+AGG 0.627501 7_3:+76197512 None:intergenic
GATGCGGCGGTGGTTGAGGG+TGG 0.627658 7_3:+76201762 None:intergenic
GGGGCATTCATCATTATCAT+GGG 0.628071 7_3:-76197756 Msa1124940:CDS
TGCTGGAGAGAATCTTTCTG+CGG 0.629304 7_3:-76201657 Msa1124940:CDS
AGTTTAATAGACACTTGGAA+TGG 0.631756 7_3:-76196446 Msa1124940:CDS
TTAAGCCAGAAGCTTATCAA+GGG 0.633280 7_3:-76195883 Msa1124940:three_prime_UTR
GTTCCTGAAAAGAGCATCGG+CGG 0.634573 7_3:-76199074 Msa1124940:CDS
TTCATATTGATGAATGAATG+GGG 0.636383 7_3:+76202209 None:intergenic
GTGTTGCAGAGACCTTATCC+GGG 0.636826 7_3:-76198965 Msa1124940:CDS
CTTGAGCTCAGACCCATGGA+TGG 0.637419 7_3:-76198754 Msa1124940:CDS
AAAAGAAAATCAAAGGAGTG+GGG 0.638637 7_3:+76195518 None:intergenic
ATAATTCTTCGATTACATGT+GGG 0.641758 7_3:+76196526 None:intergenic
ATTATCTGAAGAGTCTGAGG+AGG 0.642000 7_3:+76200138 None:intergenic
TCAGCCAAATTACGCATCGA+AGG 0.643348 7_3:+76197464 None:intergenic
AGAGACTCTGAAAGTAGTGA+TGG 0.643593 7_3:-76201797 Msa1124940:CDS
TGTAGCTCATCGATCAATCG+AGG 0.646360 7_3:+76201920 None:intergenic
ATTCAAATTCTTCGGCTGCG+AGG 0.650495 7_3:-76197643 Msa1124940:CDS
ATCGTAGCAACCCCAGAGGT+AGG 0.650618 7_3:+76201851 None:intergenic
TGATTGAGACAAGGCAAGCG+AGG 0.653277 7_3:+76196614 None:intergenic
GAAGGACCACCTGACCGAGT+AGG 0.653335 7_3:+76197047 None:intergenic
GAGGTAGGTTGTTGTCGTTG+AGG 0.655687 7_3:+76201866 None:intergenic
GAAACAACTACCATCATCTG+GGG 0.656842 7_3:-76197777 Msa1124940:CDS
TTAGTATGCAACGAGAACCT+GGG 0.656890 7_3:+76195858 None:intergenic
TTGCATATTTAACACCTATG+GGG 0.659037 7_3:-76195636 Msa1124940:intron
TGTGCTAGTTGATTGAGACA+AGG 0.659929 7_3:+76196605 None:intergenic
GAACAATCCAGATAGCGAGA+TGG 0.661154 7_3:-76196142 Msa1124940:CDS
ACTGTCAGGAAAGGGACGAG+TGG 0.661605 7_3:-76196188 Msa1124940:CDS
AAACAACTACCATCATCTGG+GGG 0.664219 7_3:-76197776 Msa1124940:CDS
TCTACTTCCTCCAACAATCG+TGG 0.664631 7_3:-76196897 Msa1124940:CDS
GGAGGAAGAGGAGTTCATGT+GGG 0.666115 7_3:-76198826 Msa1124940:CDS
CTGTCTAAGAGATAAAGCGA+AGG 0.669079 7_3:+76200615 None:intergenic
AATCACAAGAGAAGGATATG+CGG 0.670294 7_3:-76197325 Msa1124940:CDS
ATGCAAATGAAGACGCAGAG+AGG 0.671037 7_3:-76199276 Msa1124940:CDS
AGTTGCTGACTCTGTTCCTG+CGG 0.676828 7_3:+76196782 None:intergenic
AGCAGCAATTTGATTCTGAG+GGG 0.679911 7_3:-76197562 Msa1124940:CDS
CTTTGCTGTCAGACTACCCG+AGG 0.682806 7_3:-76200556 Msa1124940:intron
ACGTCTTCAGCAGTCCAGCA+GGG 0.683190 7_3:-76199986 Msa1124940:intron
GTATTGTTAAGAATATTGGG+CGG 0.684810 7_3:-76200593 Msa1124940:CDS
GTACATTATCAGACAAACCA+GGG 0.685272 7_3:+76198793 None:intergenic
AGAAGCTGAACCATTGACCG+CGG 0.688294 7_3:+76200092 None:intergenic
TTGATCGATGAGCTACAACA+AGG 0.688797 7_3:-76201914 Msa1124940:CDS
TGGAGAACCTAGTGACGCGG+CGG 0.688959 7_3:+76196995 None:intergenic
GATGAACTCCCACATCATTG+CGG 0.690002 7_3:-76196501 Msa1124940:CDS
TGAGTCACCAGCTCTTGATG+CGG 0.698871 7_3:+76201746 None:intergenic
TTAAGCCTAGGATCCAGCCA+TGG 0.699790 7_3:+76199226 None:intergenic
GGAACTCAACTTCAATCCCG+CGG 0.701859 7_3:-76200109 Msa1124940:CDS
AGACCCCGAAGAAATTAATG+TGG 0.705849 7_3:+76197019 None:intergenic
AGATGGAAAGTAGAAATGTG+GGG 0.706843 7_3:-76196125 Msa1124940:CDS
GGACGAGTGGATGTTCAAGG+GGG 0.711357 7_3:-76196175 Msa1124940:CDS
GGTCATCTTCATCCAAACGG+CGG 0.713284 7_3:-76195582 Msa1124940:three_prime_UTR
CAATGCTTGTGTGTATTGTG+TGG 0.715495 7_3:-76196231 Msa1124940:CDS
TCACAAGAGAAGGATATGCG+GGG 0.724395 7_3:-76197323 Msa1124940:CDS
TCTGAAAGTAGTGATGGTGG+CGG 0.725899 7_3:-76201791 Msa1124940:CDS
ATTTGGAGAACCTAGTGACG+CGG 0.733407 7_3:+76196992 None:intergenic
TGATTCAAAATTGTACAACG+AGG 0.733693 7_3:+76202162 None:intergenic
ACGACAACAACCTACCTCTG+GGG 0.737955 7_3:-76201861 Msa1124940:CDS
AACAACTACCATCATCTGGG+GGG 0.742353 7_3:-76197775 Msa1124940:CDS
CAACATCGTAGCAACCCCAG+AGG 0.765435 7_3:+76201847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATTTGATGAAAT+TGG - chr7_3:76197846-76197865 Msa1124940:CDS 10.0%
!! TTATTAGTAATTTCATTAAT+TGG + chr7_3:76199742-76199761 None:intergenic 10.0%
!!! AAATTTTAGTGTTAGAATTA+GGG - chr7_3:76195726-76195745 Msa1124940:three_prime_UTR 15.0%
!! ATAGTCAAATTAGTAATTAT+CGG + chr7_3:76196067-76196086 None:intergenic 15.0%
!!! ATTGTAATTGATTTTGAATT+TGG - chr7_3:76196220-76196239 Msa1124940:CDS 15.0%
!! TTCAAAAAGAATAAATTTCT+AGG - chr7_3:76196540-76196559 Msa1124940:CDS 15.0%
!! GAAAAAAGAAAAACATATTT+AGG - chr7_3:76196586-76196605 Msa1124940:CDS 15.0%
!!! CATATTTTAGATATCAAAAA+AGG - chr7_3:76198173-76198192 Msa1124940:intron 15.0%
!!! TATAACTTGTCAAATTTTAA+AGG + chr7_3:76198323-76198342 None:intergenic 15.0%
!!! GTTATCATATTTTAATAGAA+TGG - chr7_3:76198599-76198618 Msa1124940:intron 15.0%
!!! TTTTTTAAGTCAACAAAATT+AGG + chr7_3:76199627-76199646 None:intergenic 15.0%
!!! TTGATAACTTTATTTTATGA+TGG - chr7_3:76202075-76202094 Msa1124940:five_prime_UTR 15.0%
!! ATTCATATTGATGAATGAAT+GGG + chr7_3:76195542-76195561 None:intergenic 20.0%
!! AATTCATATTGATGAATGAA+TGG + chr7_3:76195543-76195562 None:intergenic 20.0%
!! ATTCATTCATCAATATGAAT+TGG - chr7_3:76195542-76195561 Msa1124940:three_prime_UTR 20.0%
!! TTCATTCATCAATATGAATT+GGG - chr7_3:76195543-76195562 Msa1124940:three_prime_UTR 20.0%
!! CTAATTCTAACACTAAAATT+TGG + chr7_3:76195727-76195746 None:intergenic 20.0%
!!! CAAATTTTAGTGTTAGAATT+AGG - chr7_3:76195725-76195744 Msa1124940:three_prime_UTR 20.0%
!!! TGTTTTGTTTGTATCATTTA+TGG - chr7_3:76196179-76196198 Msa1124940:CDS 20.0%
!!! ATAAATTTCTAGGTTTTATG+CGG - chr7_3:76196550-76196569 Msa1124940:CDS 20.0%
!!! TTTTTTGTGTCATTATGAAA+AGG - chr7_3:76196609-76196628 Msa1124940:CDS 20.0%
!!! TTTTTGTGTCATTATGAAAA+GGG - chr7_3:76196610-76196629 Msa1124940:CDS 20.0%
!! ACGATGAATTAATATTAGAT+AGG - chr7_3:76196653-76196672 Msa1124940:CDS 20.0%
!! ACAGTATTGTTAAGAATATT+GGG - chr7_3:76197151-76197170 Msa1124940:CDS 20.0%
!! TGAAATGTTTAGATTTGATT+TGG - chr7_3:76197340-76197359 Msa1124940:CDS 20.0%
!!! GTTAGATGATTCATTTTTTA+TGG + chr7_3:76197400-76197419 None:intergenic 20.0%
!! TGAAAAATTCCATTTATTGA+CGG + chr7_3:76197422-76197441 None:intergenic 20.0%
!! TAAAATTAGAAAATACTCGA+AGG + chr7_3:76197456-76197475 None:intergenic 20.0%
!! TTAAGTCTGTAAAGATTATT+AGG + chr7_3:76198104-76198123 None:intergenic 20.0%
!! TTTGTAAATTTCTAACTTGA+AGG + chr7_3:76199172-76199191 None:intergenic 20.0%
!! AATTATGTCTTAGGTTTATT+AGG + chr7_3:76199673-76199692 None:intergenic 20.0%
!! AAATTAGGAAATTATGTCTT+AGG + chr7_3:76199682-76199701 None:intergenic 20.0%
!! CATAATTTCCTAATTTAACT+TGG - chr7_3:76199686-76199705 Msa1124940:intron 20.0%
!! GATAATTATGATTTAGTTAC+AGG + chr7_3:76199773-76199792 None:intergenic 20.0%
!! TATGATGATAATAAAACAGA+CGG - chr7_3:76201456-76201475 Msa1124940:intron 20.0%
!!! TTAGTCTATTTGAATTTTGA+AGG - chr7_3:76201756-76201775 Msa1124940:CDS 20.0%
!! ATTTGACAAAAGAAAATCAA+AGG + chr7_3:76202239-76202258 None:intergenic 20.0%
!! ATTAGATTTTATCACTTCAC+TGG + chr7_3:76195380-76195399 None:intergenic 25.0%
! TTCATATTGATGAATGAATG+GGG + chr7_3:76195541-76195560 None:intergenic 25.0%
! TCATTCATCAATATGAATTG+GGG - chr7_3:76195544-76195563 Msa1124940:three_prime_UTR 25.0%
!! GATTCAATTTTTCATGAACA+TGG - chr7_3:76195754-76195773 Msa1124940:three_prime_UTR 25.0%
! ACTAATTTGACTATAATTGC+TGG - chr7_3:76196073-76196092 Msa1124940:CDS 25.0%
! ACAAAACAAGAACAATTTCT+CGG + chr7_3:76196167-76196186 None:intergenic 25.0%
!!! GAAGTTTTATCATGGAAAAA+TGG - chr7_3:76196330-76196349 Msa1124940:CDS 25.0%
!! TTCATCCATTTTATAGTTGT+TGG - chr7_3:76196385-76196404 Msa1124940:CDS 25.0%
! CATTATGAAAAGGGAAAAAA+AGG - chr7_3:76196619-76196638 Msa1124940:CDS 25.0%
!!! TCAGTTTATTTTCTCGAATA+GGG - chr7_3:76196900-76196919 Msa1124940:CDS 25.0%
! TTGATGCTAAGTTATAACAT+AGG - chr7_3:76196946-76196965 Msa1124940:CDS 25.0%
! TGATGCTAAGTTATAACATA+GGG - chr7_3:76196947-76196966 Msa1124940:CDS 25.0%
! ACAAATGTAAACAAGGATTA+AGG + chr7_3:76197001-76197020 None:intergenic 25.0%
!! TAATCCTTGTTTACATTTGT+TGG - chr7_3:76197001-76197020 Msa1124940:CDS 25.0%
!! AATCCTTGTTTACATTTGTT+GGG - chr7_3:76197002-76197021 Msa1124940:CDS 25.0%
!!! TTGTCGATTTGTTATAAGAA+AGG - chr7_3:76197053-76197072 Msa1124940:CDS 25.0%
!!! TGTCGATTTGTTATAAGAAA+GGG - chr7_3:76197054-76197073 Msa1124940:CDS 25.0%
! AATTATGTTAATGACTTTCC+AGG - chr7_3:76197089-76197108 Msa1124940:CDS 25.0%
! GACAGTATTGTTAAGAATAT+TGG - chr7_3:76197150-76197169 Msa1124940:CDS 25.0%
!!! TTAGATTTGATTTGGTTACA+TGG - chr7_3:76197348-76197367 Msa1124940:CDS 25.0%
!!! TTATACACGCATTTTTAACT+AGG - chr7_3:76197473-76197492 Msa1124940:CDS 25.0%
! CTAAAATGTAAAGGAGTAAT+TGG + chr7_3:76197505-76197524 None:intergenic 25.0%
!! CAATTACTCCTTTACATTTT+AGG - chr7_3:76197503-76197522 Msa1124940:CDS 25.0%
! TGAATCCCAAATATTTAGAA+AGG - chr7_3:76197736-76197755 Msa1124940:CDS 25.0%
! TATGTAATCTGTTGCATTAA+AGG + chr7_3:76197812-76197831 None:intergenic 25.0%
!!! ATTTTTGGCCTACTATATTA+TGG - chr7_3:76198036-76198055 Msa1124940:intron 25.0%
!!! TTTTTGGCCTACTATATTAT+GGG - chr7_3:76198037-76198056 Msa1124940:intron 25.0%
! TTTGTTCATAGTATGACATA+TGG - chr7_3:76198070-76198089 Msa1124940:intron 25.0%
!! TGATAATTTAAAGGCATAGA+GGG + chr7_3:76198244-76198263 None:intergenic 25.0%
!!! GTTGATTCGTGATAATTTAA+AGG + chr7_3:76198253-76198272 None:intergenic 25.0%
!!! TCAAATTTTAAAGGCATAGA+GGG + chr7_3:76198314-76198333 None:intergenic 25.0%
!!! TAAAGGAGTATTTGATGATA+TGG - chr7_3:76198433-76198452 Msa1124940:intron 25.0%
! ACAGATTGAATAGTATAAAG+AGG + chr7_3:76198577-76198596 None:intergenic 25.0%
! TTCTAGTGTTTCAAATAGTT+TGG - chr7_3:76198720-76198739 Msa1124940:intron 25.0%
! TCTAGTGTTTCAAATAGTTT+GGG - chr7_3:76198721-76198740 Msa1124940:intron 25.0%
! GATTTGAAAAACTATGTTTG+AGG + chr7_3:76198825-76198844 None:intergenic 25.0%
! TAATTGGGAAAAAACTGAAT+TGG + chr7_3:76199089-76199108 None:intergenic 25.0%
!! TTTTTCCCAATTATGAAATG+AGG - chr7_3:76199096-76199115 Msa1124940:CDS 25.0%
!! GATTGATTCTTCCAATTAAT+CGG + chr7_3:76199364-76199383 None:intergenic 25.0%
!!! ATGTCATCATATTTCAAGTT+GGG + chr7_3:76199387-76199406 None:intergenic 25.0%
! AAGTAAATGTCTATCACAAT+AGG - chr7_3:76199459-76199478 Msa1124940:intron 25.0%
! AGTAAATGTCTATCACAATA+GGG - chr7_3:76199460-76199479 Msa1124940:intron 25.0%
!! AGCAACAAAATTTTTGTATC+AGG - chr7_3:76199501-76199520 Msa1124940:intron 25.0%
! ATCTTATGCCAAGTTAAATT+AGG + chr7_3:76199697-76199716 None:intergenic 25.0%
! TATTAACCTTTGTTCCAATT+GGG + chr7_3:76199931-76199950 None:intergenic 25.0%
! TTATTAACCTTTGTTCCAAT+TGG + chr7_3:76199932-76199951 None:intergenic 25.0%
! ATTGGAACAAAGGTTAATAA+AGG - chr7_3:76199932-76199951 Msa1124940:intron 25.0%
! AATAGGAATGTCCAAAATTA+CGG - chr7_3:76200159-76200178 Msa1124940:CDS 25.0%
! TCTTAAAACATCTCAACATT+TGG - chr7_3:76200324-76200343 Msa1124940:intron 25.0%
! CTTAAAACATCTCAACATTT+GGG - chr7_3:76200325-76200344 Msa1124940:intron 25.0%
! AAAGAAGTTGCTAAAGATAA+CGG + chr7_3:76200451-76200470 None:intergenic 25.0%
!! CTTCTCGTAATTGATTTATT+GGG + chr7_3:76200640-76200659 None:intergenic 25.0%
!! ACTTCTCGTAATTGATTTAT+TGG + chr7_3:76200641-76200660 None:intergenic 25.0%
!! AAGATTTGAAATTGGATTCA+AGG + chr7_3:76200914-76200933 None:intergenic 25.0%
!! GAGCTTAAAAGATTTGAAAT+TGG + chr7_3:76200922-76200941 None:intergenic 25.0%
! ACAGAAATTAGAAATCTCAT+TGG - chr7_3:76201162-76201181 Msa1124940:intron 25.0%
! ATAATTCTTCGATTACATGT+GGG + chr7_3:76201224-76201243 None:intergenic 25.0%
! AATAATTCTTCGATTACATG+TGG + chr7_3:76201225-76201244 None:intergenic 25.0%
! ACATGTAATCGAAGAATTAT+TGG - chr7_3:76201224-76201243 Msa1124940:intron 25.0%
! ACAAAAGAAAGAGAACAAAA+TGG - chr7_3:76201330-76201349 Msa1124940:intron 25.0%
! ATGATGATAATAAAACAGAC+GGG - chr7_3:76201457-76201476 Msa1124940:intron 25.0%
! AAGACTCATAGTTAATTGAA+TGG - chr7_3:76201704-76201723 Msa1124940:CDS 25.0%
!!! GTTCAAATTTTTGTACTGAT+TGG - chr7_3:76201782-76201801 Msa1124940:CDS 25.0%
!! ATTCATAACTTGTATTGCAT+TGG - chr7_3:76201833-76201852 Msa1124940:CDS 25.0%
!!! CAATGGTTTTAAATGTGAAA+AGG + chr7_3:76201925-76201944 None:intergenic 25.0%
!!! ACTTTATTTTATGATGGTGA+TGG - chr7_3:76202081-76202100 Msa1124940:five_prime_UTR 25.0%
!!! CTTTATTTTATGATGGTGAT+GGG - chr7_3:76202082-76202101 Msa1124940:five_prime_UTR 25.0%
!!! TTTATTTTATGATGGTGATG+GGG - chr7_3:76202083-76202102 Msa1124940:five_prime_UTR 25.0%
! ATTTGCATATTTAACACCTA+TGG - chr7_3:76202109-76202128 Msa1124940:five_prime_UTR 25.0%
! TTTGCATATTTAACACCTAT+GGG - chr7_3:76202110-76202129 Msa1124940:five_prime_UTR 25.0%
! TTTATGCAGCTGATAAATTA+AGG + chr7_3:76202332-76202351 None:intergenic 25.0%
ATCAATATGAATTGGGGATT+AGG - chr7_3:76195550-76195569 Msa1124940:three_prime_UTR 30.0%
TCAATATGAATTGGGGATTA+GGG - chr7_3:76195551-76195570 Msa1124940:three_prime_UTR 30.0%
TGATTCAAAATTGTACAACG+AGG + chr7_3:76195588-76195607 None:intergenic 30.0%
! TGCTTGTGCTATTGATAAAT+TGG - chr7_3:76196287-76196306 Msa1124940:CDS 30.0%
! GCTTGTGCTATTGATAAATT+GGG - chr7_3:76196288-76196307 Msa1124940:CDS 30.0%
TGAATGCTAGTTAGAAAAGA+AGG - chr7_3:76196353-76196372 Msa1124940:CDS 30.0%
CGTTACCAACAACTATAAAA+TGG + chr7_3:76196393-76196412 None:intergenic 30.0%
TACAAATTCTACAAAAGACC+AGG + chr7_3:76196807-76196826 None:intergenic 30.0%
TTGTAGAATTTGTACGCAAT+AGG - chr7_3:76196813-76196832 Msa1124940:CDS 30.0%
TGTAGAATTTGTACGCAATA+GGG - chr7_3:76196814-76196833 Msa1124940:CDS 30.0%
!! GTCAGTTTATTTTCTCGAAT+AGG - chr7_3:76196899-76196918 Msa1124940:CDS 30.0%
! ATCCTTGTTTACATTTGTTG+GGG - chr7_3:76197003-76197022 Msa1124940:CDS 30.0%
GTATTGTTAAGAATATTGGG+CGG - chr7_3:76197154-76197173 Msa1124940:CDS 30.0%
TATTGTTAAGAATATTGGGC+GGG - chr7_3:76197155-76197174 Msa1124940:CDS 30.0%
TCTATCATCTTTCCTTCTAT+TGG - chr7_3:76197225-76197244 Msa1124940:CDS 30.0%
!!! TTCATTTTTTATGGCAATGC+CGG + chr7_3:76197391-76197410 None:intergenic 30.0%
ATCATCTAACCGTCAATAAA+TGG - chr7_3:76197410-76197429 Msa1124940:CDS 30.0%
GCAGAATACCTAAAATGTAA+AGG + chr7_3:76197514-76197533 None:intergenic 30.0%
! CTAAATATTTGGGATTCACA+TGG + chr7_3:76197734-76197753 None:intergenic 30.0%
CGTTGCCTTTCTAAATATTT+GGG + chr7_3:76197744-76197763 None:intergenic 30.0%
ACGTTGCCTTTCTAAATATT+TGG + chr7_3:76197745-76197764 None:intergenic 30.0%
GTGTTCCTTGAATAATGAAA+CGG - chr7_3:76197883-76197902 Msa1124940:intron 30.0%
! CCTACTATATTATGGGTTTT+GGG - chr7_3:76198044-76198063 Msa1124940:intron 30.0%
! CTACTATATTATGGGTTTTG+GGG - chr7_3:76198045-76198064 Msa1124940:intron 30.0%
! GTGATAATTTAAAGGCATAG+AGG + chr7_3:76198245-76198264 None:intergenic 30.0%
!! GTCAAATTTTAAAGGCATAG+AGG + chr7_3:76198315-76198334 None:intergenic 30.0%
AGAATTAAGTACCAGAGATA+GGG + chr7_3:76198381-76198400 None:intergenic 30.0%
AAGAATTAAGTACCAGAGAT+AGG + chr7_3:76198382-76198401 None:intergenic 30.0%
!! TTTTGTTTCATGCAGACTAA+AGG - chr7_3:76198416-76198435 Msa1124940:intron 30.0%
AATAATCAGCATACTCATAG+AGG - chr7_3:76198634-76198653 Msa1124940:intron 30.0%
GTCAAAGAACTGGAAAAATT+CGG - chr7_3:76198900-76198919 Msa1124940:CDS 30.0%
CTGAATTGGACAAACAAATT+GGG + chr7_3:76199075-76199094 None:intergenic 30.0%
ACTGAATTGGACAAACAAAT+TGG + chr7_3:76199076-76199095 None:intergenic 30.0%
AAGCACCTCATTTCATAATT+GGG + chr7_3:76199104-76199123 None:intergenic 30.0%
! AAAGCACCTCATTTCATAAT+TGG + chr7_3:76199105-76199124 None:intergenic 30.0%
CAAAACAAGGTAGATCAAAT+TGG + chr7_3:76199128-76199147 None:intergenic 30.0%
!!! GATCTACCTTGTTTTGTTTT+TGG - chr7_3:76199132-76199151 Msa1124940:intron 30.0%
CACATTCCAAAAACAAAACA+AGG + chr7_3:76199141-76199160 None:intergenic 30.0%
ATTTCTAACTTGAAGGACAA+GGG + chr7_3:76199165-76199184 None:intergenic 30.0%
AATTTCTAACTTGAAGGACA+AGG + chr7_3:76199166-76199185 None:intergenic 30.0%
ATTGCCATAAAATTACTTGC+AGG + chr7_3:76199207-76199226 None:intergenic 30.0%
! ATTTTTATCAAAACCAGCCA+GGG + chr7_3:76199249-76199268 None:intergenic 30.0%
!! TGTCATCATATTTCAAGTTG+GGG + chr7_3:76199386-76199405 None:intergenic 30.0%
! GATGTCATCATATTTCAAGT+TGG + chr7_3:76199388-76199407 None:intergenic 30.0%
AGTAAAGCAAACTAAAGAAG+AGG - chr7_3:76199410-76199429 Msa1124940:intron 30.0%
GTAAAGCAAACTAAAGAAGA+GGG - chr7_3:76199411-76199430 Msa1124940:intron 30.0%
AACATGACAAAATGCTTGAT+CGG - chr7_3:76199435-76199454 Msa1124940:intron 30.0%
TAGGCATATTTATTATCCCA+CGG + chr7_3:76199608-76199627 None:intergenic 30.0%
CTGCATGCAAAAAACAAAAT+TGG + chr7_3:76199879-76199898 None:intergenic 30.0%
!!! CAATTTTGTTTTTTGCATGC+AGG - chr7_3:76199877-76199896 Msa1124940:intron 30.0%
TCATATTCAATTTGGCACTT+GGG + chr7_3:76200033-76200052 None:intergenic 30.0%
TTCATATTCAATTTGGCACT+TGG + chr7_3:76200034-76200053 None:intergenic 30.0%
!! ATATTTGTTTCTGCTCCTAA+TGG - chr7_3:76200070-76200089 Msa1124940:CDS 30.0%
ATAGGAATGTCCAAAATTAC+GGG - chr7_3:76200160-76200179 Msa1124940:CDS 30.0%
!!! TGAGATGTTTTAAGAGATGT+TGG + chr7_3:76200319-76200338 None:intergenic 30.0%
TAAATCAATTACGAGAAGTC+TGG - chr7_3:76200642-76200661 Msa1124940:intron 30.0%
AGAGTAGGTGAATAATCATT+TGG + chr7_3:76200775-76200794 None:intergenic 30.0%
! ATTCAAGGTATTCTTATTGG+CGG + chr7_3:76200899-76200918 None:intergenic 30.0%
! TGGATTCAAGGTATTCTTAT+TGG + chr7_3:76200902-76200921 None:intergenic 30.0%
!! CAATTCTGGAAGATTTTACT+GGG + chr7_3:76201092-76201111 None:intergenic 30.0%
!! TCAATTCTGGAAGATTTTAC+TGG + chr7_3:76201093-76201112 None:intergenic 30.0%
AGTAAAATCTTCCAGAATTG+AGG - chr7_3:76201092-76201111 Msa1124940:intron 30.0%
AGAACAGTTTAATAGACACT+TGG - chr7_3:76201296-76201315 Msa1124940:intron 30.0%
AGTTTAATAGACACTTGGAA+TGG - chr7_3:76201301-76201320 Msa1124940:intron 30.0%
ATTTGAAGATGTATACTGTC+AGG - chr7_3:76201545-76201564 Msa1124940:intron 30.0%
TTGTCAGATAACTCAATACT+TGG - chr7_3:76201666-76201685 Msa1124940:CDS 30.0%
! CAAAATTTGTTTGACTGCTT+AGG + chr7_3:76201961-76201980 None:intergenic 30.0%
TTCCTCAAGTACAACAAAAA+GGG + chr7_3:76201986-76202005 None:intergenic 30.0%
TTTCCTCAAGTACAACAAAA+AGG + chr7_3:76201987-76202006 None:intergenic 30.0%
TTGCATATTTAACACCTATG+GGG - chr7_3:76202111-76202130 Msa1124940:five_prime_UTR 30.0%
AAAAGAAAATCAAAGGAGTG+GGG + chr7_3:76202232-76202251 None:intergenic 30.0%
CAAAAGAAAATCAAAGGAGT+GGG + chr7_3:76202233-76202252 None:intergenic 30.0%
ACAAAAGAAAATCAAAGGAG+TGG + chr7_3:76202234-76202253 None:intergenic 30.0%
TGTCAAATCTACACATTCTT+TGG - chr7_3:76202251-76202270 Msa1124940:five_prime_UTR 30.0%
GTCAAATCTACACATTCTTT+GGG - chr7_3:76202252-76202271 Msa1124940:five_prime_UTR 30.0%
TGTTTGTGGTAACATTCTTG+AGG - chr7_3:76196132-76196151 Msa1124940:CDS 35.0%
!! AATTGGGTTAGTGTTGTTCT+CGG - chr7_3:76196304-76196323 Msa1124940:CDS 35.0%
!! TATAGTTGTTGGTAACGTCT+AGG - chr7_3:76196396-76196415 Msa1124940:CDS 35.0%
TGCATTGCAATGATTCTGTT+AGG - chr7_3:76196692-76196711 Msa1124940:CDS 35.0%
AATTGCATATGGACTCCATT+AGG + chr7_3:76196745-76196764 None:intergenic 35.0%
GTCCATATGCAATTTACAAG+TGG - chr7_3:76196751-76196770 Msa1124940:CDS 35.0%
CAATAGGGACTAAGAATCTT+TGG - chr7_3:76196829-76196848 Msa1124940:CDS 35.0%
CAAATCGACAAACAAGCAAT+GGG + chr7_3:76197044-76197063 None:intergenic 35.0%
ACAAATCGACAAACAAGCAA+TGG + chr7_3:76197045-76197064 None:intergenic 35.0%
ATAGATAGATATCTGACCTC+GGG + chr7_3:76197210-76197229 None:intergenic 35.0%
GATAGATAGATATCTGACCT+CGG + chr7_3:76197211-76197230 None:intergenic 35.0%
AAGGAAGTAATGCCAATAGA+AGG + chr7_3:76197240-76197259 None:intergenic 35.0%
! GGATGATAATGCAATAGTTC+CGG - chr7_3:76197369-76197388 Msa1124940:CDS 35.0%
ATTCTGCAATACATACAGAC+AGG - chr7_3:76197527-76197546 Msa1124940:CDS 35.0%
AAAGATGCCTCATACTTGAA+TGG + chr7_3:76197566-76197585 None:intergenic 35.0%
!! TCAAGTATGAGGCATCTTTT+TGG - chr7_3:76197567-76197586 Msa1124940:CDS 35.0%
TCAATTATCTGAAGAGTCTG+AGG + chr7_3:76197615-76197634 None:intergenic 35.0%
GACTCTTCAGATAATTGAGA+AGG - chr7_3:76197617-76197636 Msa1124940:CDS 35.0%
AGACTGAGAATCACTTCTAA+GGG + chr7_3:76197691-76197710 None:intergenic 35.0%
TAACCAAGCTCAAAAGTTGA+TGG + chr7_3:76197929-76197948 None:intergenic 35.0%
! GCGTGAACTGTTCTAATTTT+TGG - chr7_3:76198021-76198040 Msa1124940:intron 35.0%
! GCCTACTATATTATGGGTTT+TGG - chr7_3:76198043-76198062 Msa1124940:intron 35.0%
CCCAAAACCCATAATATAGT+AGG + chr7_3:76198047-76198066 None:intergenic 35.0%
AGATATCAAAAAAGGCCTTC+CGG - chr7_3:76198181-76198200 Msa1124940:intron 35.0%
ATTATATCCATCGTCTCCAT+AGG + chr7_3:76198701-76198720 None:intergenic 35.0%
! GTTTCAAATAGTTTGGGTTC+AGG - chr7_3:76198727-76198746 Msa1124940:intron 35.0%
ATTTGGATGCACATAGCATA+AGG - chr7_3:76198866-76198885 Msa1124940:CDS 35.0%
AAAGAACTGGAAAAATTCGG+AGG - chr7_3:76198903-76198922 Msa1124940:CDS 35.0%
GTACATTATCAGACAAACCA+GGG + chr7_3:76198957-76198976 None:intergenic 35.0%
! CTCAAGTTGTTAGAGACATT+AGG + chr7_3:76198979-76198998 None:intergenic 35.0%
GCTTACCAAATTGTCTTCAT+CGG + chr7_3:76199019-76199038 None:intergenic 35.0%
!! TGGTAAGCTTGCTACAATAA+AGG - chr7_3:76199031-76199050 Msa1124940:CDS 35.0%
!! GGTAAGCTTGCTACAATAAA+GGG - chr7_3:76199032-76199051 Msa1124940:CDS 35.0%
! GCATCCTGCAAGTAATTTTA+TGG - chr7_3:76199200-76199219 Msa1124940:intron 35.0%
! CATTTTTATCAAAACCAGCC+AGG + chr7_3:76199250-76199269 None:intergenic 35.0%
!!! AGAAATTGACTTGTCGCTTT+TGG - chr7_3:76199277-76199296 Msa1124940:CDS 35.0%
AAATGTCTATCACAATAGGG+TGG - chr7_3:76199463-76199482 Msa1124940:intron 35.0%
AATGTCTATCACAATAGGGT+GGG - chr7_3:76199464-76199483 Msa1124940:intron 35.0%
!! TGGTAGTTGTTTCTTAACAG+TGG + chr7_3:76199963-76199982 None:intergenic 35.0%
AAGAAACAACTACCATCATC+TGG - chr7_3:76199968-76199987 Msa1124940:intron 35.0%
AGAAACAACTACCATCATCT+GGG - chr7_3:76199969-76199988 Msa1124940:intron 35.0%
ACCTGGCTTCATATTCAATT+TGG + chr7_3:76200041-76200060 None:intergenic 35.0%
! ACAAATATTTCTGAGTGACC+TGG + chr7_3:76200058-76200077 None:intergenic 35.0%
ACCCAAGCATTCAAATTCTT+CGG - chr7_3:76200096-76200115 Msa1124940:CDS 35.0%
GACATTCCTATTGTTGTATG+CGG + chr7_3:76200151-76200170 None:intergenic 35.0%
AAAACATCTCAACATTTGGG+TGG - chr7_3:76200328-76200347 Msa1124940:intron 35.0%
AATCACAAGAGAAGGATATG+CGG - chr7_3:76200422-76200441 Msa1124940:intron 35.0%
!! AAAGGAGCTTTAGATTTGAG+TGG + chr7_3:76200541-76200560 None:intergenic 35.0%
!!! TGACTTTTCTGAAGTCACTT+TGG + chr7_3:76200572-76200591 None:intergenic 35.0%
AGTAACTGTCCATCTCAAAT+AGG - chr7_3:76200670-76200689 Msa1124940:intron 35.0%
GTAACTGTCCATCTCAAATA+GGG - chr7_3:76200671-76200690 Msa1124940:intron 35.0%
AAATAGGGTTTAAGCCTACT+CGG - chr7_3:76200686-76200705 Msa1124940:intron 35.0%
TGATTGTAGCATCAAGAAGA+TGG - chr7_3:76201355-76201374 Msa1124940:intron 35.0%
AAGATGTATACTGTCAGGAA+AGG - chr7_3:76201550-76201569 Msa1124940:intron 35.0%
AGATGTATACTGTCAGGAAA+GGG - chr7_3:76201551-76201570 Msa1124940:intron 35.0%
GAGATGGAAAGTAGAAATGT+GGG - chr7_3:76201621-76201640 Msa1124940:CDS 35.0%
AGATGGAAAGTAGAAATGTG+GGG - chr7_3:76201622-76201641 Msa1124940:CDS 35.0%
AAGCATCTAGCATGAATGAT+GGG + chr7_3:76201648-76201667 None:intergenic 35.0%
TTAAGCCAGAAGCTTATCAA+GGG - chr7_3:76201864-76201883 Msa1124940:CDS 35.0%
CGTTGCATACTAAAACTAGA+TGG - chr7_3:76201899-76201918 Msa1124940:CDS 35.0%
!! TTCCCTTTTTGTTGTACTTG+AGG - chr7_3:76201981-76202000 Msa1124940:CDS 35.0%
AAAGAAAATCAAAGGAGTGG+GGG + chr7_3:76202231-76202250 None:intergenic 35.0%
AAATCTACACATTCTTTGGG+AGG - chr7_3:76202255-76202274 Msa1124940:five_prime_UTR 35.0%
! AATCTACACATTCTTTGGGA+GGG - chr7_3:76202256-76202275 Msa1124940:five_prime_UTR 35.0%
CACAACATTTGGTCAAATGT+TGG + chr7_3:76202386-76202405 None:intergenic 35.0%
GAGAGGTGAAAGAGAAAAGA+GGG + chr7_3:76195455-76195474 None:intergenic 40.0%
AGAGAGGTGAAAGAGAAAAG+AGG + chr7_3:76195456-76195475 None:intergenic 40.0%
! TGCGGATTTTATTGAGAGTG+TGG + chr7_3:76195644-76195663 None:intergenic 40.0%
TCCGCACAAGAATCAATAAG+CGG - chr7_3:76195658-76195677 Msa1124940:three_prime_UTR 40.0%
!! TCCGCTTATTGATTCTTGTG+CGG + chr7_3:76195662-76195681 None:intergenic 40.0%
TTAGATAGATCGAGAGAACC+AGG - chr7_3:76195794-76195813 Msa1124940:three_prime_UTR 40.0%
TTGATCGATGAGCTACAACA+AGG - chr7_3:76195833-76195852 Msa1124940:three_prime_UTR 40.0%
AAACGTTCGTGAAGTTGGAT+TGG + chr7_3:76195861-76195880 None:intergenic 40.0%
! AGAGACTCTGAAAGTAGTGA+TGG - chr7_3:76195950-76195969 Msa1124940:intron 40.0%
!! ATTGGGTTAGTGTTGTTCTC+GGG - chr7_3:76196305-76196324 Msa1124940:CDS 40.0%
!! CTCGGGTAGAAGTTTTATCA+TGG - chr7_3:76196322-76196341 Msa1124940:CDS 40.0%
!!! TAGGTTTTCTGAAACCCACT+TGG - chr7_3:76196415-76196434 Msa1124940:CDS 40.0%
!!! AGGTTTTCTGAAACCCACTT+GGG - chr7_3:76196416-76196435 Msa1124940:CDS 40.0%
!!! TTTCTTTTTTCTCGCGTGCA+TGG + chr7_3:76196577-76196596 None:intergenic 40.0%
CAATGATTCTGTTAGGTACC+AGG - chr7_3:76196699-76196718 Msa1124940:CDS 40.0%
ATTCTGTTAGGTACCAGGTT+TGG - chr7_3:76196704-76196723 Msa1124940:CDS 40.0%
TTCTGTTAGGTACCAGGTTT+GGG - chr7_3:76196705-76196724 Msa1124940:CDS 40.0%
TATGGACTCCATTAGGATAC+CGG + chr7_3:76196738-76196757 None:intergenic 40.0%
CGCCACTTGTAAATTGCATA+TGG + chr7_3:76196756-76196775 None:intergenic 40.0%
! ATAGGGCTGATGTCAACTTT+TGG - chr7_3:76196917-76196936 Msa1124940:CDS 40.0%
TGCCCCAACAAATGTAAACA+AGG + chr7_3:76197008-76197027 None:intergenic 40.0%
CTGTCTAAGAGATAAAGCGA+AGG + chr7_3:76197135-76197154 None:intergenic 40.0%
!!! TGAGGCATCTTTTTGGAACT+TGG - chr7_3:76197574-76197593 Msa1124940:CDS 40.0%
!!! CATCTTTTTGGAACTTGGAG+AGG - chr7_3:76197579-76197598 Msa1124940:CDS 40.0%
ATTATCTGAAGAGTCTGAGG+AGG + chr7_3:76197612-76197631 None:intergenic 40.0%
GAGACTGAGAATCACTTCTA+AGG + chr7_3:76197692-76197711 None:intergenic 40.0%
TCACATGGATGCTATGAGAT+GGG + chr7_3:76197719-76197738 None:intergenic 40.0%
TTCACATGGATGCTATGAGA+TGG + chr7_3:76197720-76197739 None:intergenic 40.0%
CAGCACCGTTTCATTATTCA+AGG + chr7_3:76197891-76197910 None:intergenic 40.0%
CTTGAATAATGAAACGGTGC+TGG - chr7_3:76197889-76197908 Msa1124940:intron 40.0%
! TCGTGATAAGTACTGTGAAC+CGG + chr7_3:76198203-76198222 None:intergenic 40.0%
! GGAGTATTTGATGATATGGC+TGG - chr7_3:76198437-76198456 Msa1124940:intron 40.0%
CATACATGCATGTTAAGCCT+AGG + chr7_3:76198536-76198555 None:intergenic 40.0%
! TCTGTTCCTGAAAAGAGCAT+CGG - chr7_3:76198670-76198689 Msa1124940:intron 40.0%
! AATAGTTTGGGTTCAGGTGT+TGG - chr7_3:76198733-76198752 Msa1124940:intron 40.0%
GCATCCAAATTCACAGACTT+CGG + chr7_3:76198856-76198875 None:intergenic 40.0%
GGTACATTATCAGACAAACC+AGG + chr7_3:76198958-76198977 None:intergenic 40.0%
ATAGGGTGGGAAAGGATAAT+TGG - chr7_3:76199477-76199496 Msa1124940:intron 40.0%
CGTTTCTATGCATCATTCCT+TGG + chr7_3:76199549-76199568 None:intergenic 40.0%
GAGTCATGCATAGATGTGAT+TGG + chr7_3:76199582-76199601 None:intergenic 40.0%
TGGTGTAATTGTAGAGTCCT+GGG + chr7_3:76199722-76199741 None:intergenic 40.0%
TTGGTGTAATTGTAGAGTCC+TGG + chr7_3:76199723-76199742 None:intergenic 40.0%
TTCCAATTGGGTGTGTGATT+TGG + chr7_3:76199919-76199938 None:intergenic 40.0%
GAAACAACTACCATCATCTG+GGG - chr7_3:76199970-76199989 Msa1124940:intron 40.0%
AAACAACTACCATCATCTGG+GGG - chr7_3:76199971-76199990 Msa1124940:intron 40.0%
! GGGGCATTCATCATTATCAT+GGG - chr7_3:76199991-76200010 Msa1124940:CDS 40.0%
GCCAAATTGAATATGAAGCC+AGG - chr7_3:76200037-76200056 Msa1124940:CDS 40.0%
GCCGAAGAATTTGAATGCTT+GGG + chr7_3:76200100-76200119 None:intergenic 40.0%
AGCCGAAGAATTTGAATGCT+TGG + chr7_3:76200101-76200120 None:intergenic 40.0%
TCTATGCCGCATACAACAAT+AGG - chr7_3:76200142-76200161 Msa1124940:CDS 40.0%
ACAGCAGCAATTTGATTCTG+AGG - chr7_3:76200183-76200202 Msa1124940:CDS 40.0%
CAGCAGCAATTTGATTCTGA+GGG - chr7_3:76200184-76200203 Msa1124940:CDS 40.0%
AGCAGCAATTTGATTCTGAG+GGG - chr7_3:76200185-76200204 Msa1124940:CDS 40.0%
! AAGGTGAAGACTGTTCTGAA+GGG + chr7_3:76200219-76200238 None:intergenic 40.0%
AAAGGTGAAGACTGTTCTGA+AGG + chr7_3:76200220-76200239 None:intergenic 40.0%
AACCTGAACATTGGAACGAA+TGG + chr7_3:76200389-76200408 None:intergenic 40.0%
ATTCGTTCCAATGTTCAGGT+TGG - chr7_3:76200388-76200407 Msa1124940:intron 40.0%
CAAGTTACCAACCTGAACAT+TGG + chr7_3:76200398-76200417 None:intergenic 40.0%
CTTGCGAAAATCACAAGAGA+AGG - chr7_3:76200414-76200433 Msa1124940:intron 40.0%
ATCACAAGAGAAGGATATGC+GGG - chr7_3:76200423-76200442 Msa1124940:intron 40.0%
!! GTCACTTTGGCTTTGACTAA+AGG + chr7_3:76200559-76200578 None:intergenic 40.0%
ATGATTCCACTCTTCACAGA+TGG + chr7_3:76200616-76200635 None:intergenic 40.0%
GGCTTAAACCCTATTTGAGA+TGG + chr7_3:76200682-76200701 None:intergenic 40.0%
CGAAGAAATTAATGTGGTCG+GGG + chr7_3:76200725-76200744 None:intergenic 40.0%
CCGAAGAAATTAATGTGGTC+GGG + chr7_3:76200726-76200745 None:intergenic 40.0%
CCCGACCACATTAATTTCTT+CGG - chr7_3:76200723-76200742 Msa1124940:intron 40.0%
CCCGAAGAAATTAATGTGGT+CGG + chr7_3:76200727-76200746 None:intergenic 40.0%
CCGACCACATTAATTTCTTC+GGG - chr7_3:76200724-76200743 Msa1124940:intron 40.0%
CGACCACATTAATTTCTTCG+GGG - chr7_3:76200725-76200744 Msa1124940:intron 40.0%
AGACCCCGAAGAAATTAATG+TGG + chr7_3:76200731-76200750 None:intergenic 40.0%
TTATTGGCGGTATTTGAGCT+CGG + chr7_3:76200886-76200905 None:intergenic 40.0%
TTAAGCTCGTTAGTTGCGAA+AGG - chr7_3:76200934-76200953 Msa1124940:intron 40.0%
TGACAGCAATGCTTTCAGTT+TGG + chr7_3:76201026-76201045 None:intergenic 40.0%
AACTGAAGCAACTGGTAAAG+AGG + chr7_3:76201052-76201071 None:intergenic 40.0%
TGTGCTAGTTGATTGAGACA+AGG + chr7_3:76201145-76201164 None:intergenic 40.0%
TGCATTTCTCGAATGACATC+AGG + chr7_3:76201201-76201220 None:intergenic 40.0%
ATTGCGGTGATTGTGGTATT+AGG - chr7_3:76201262-76201281 Msa1124940:intron 40.0%
TAAAACAGACGGGAGTCAAT+TGG - chr7_3:76201467-76201486 Msa1124940:intron 40.0%
CACACAATACACACAAGCAT+TGG + chr7_3:76201518-76201537 None:intergenic 40.0%
CAATGCTTGTGTGTATTGTG+TGG - chr7_3:76201516-76201535 Msa1124940:intron 40.0%
CGAGATGGAAAGTAGAAATG+TGG - chr7_3:76201620-76201639 Msa1124940:CDS 40.0%
CAAGCATCTAGCATGAATGA+TGG + chr7_3:76201649-76201668 None:intergenic 40.0%
!! ATAAGCTTCTGGCTTAACCT+TGG + chr7_3:76201861-76201880 None:intergenic 40.0%
GTTAAGCCAGAAGCTTATCA+AGG - chr7_3:76201863-76201882 Msa1124940:CDS 40.0%
TTAGTATGCAACGAGAACCT+GGG + chr7_3:76201892-76201911 None:intergenic 40.0%
TTTAGTATGCAACGAGAACC+TGG + chr7_3:76201893-76201912 None:intergenic 40.0%
!!! ATTTTATGATGGTGATGGGG+CGG - chr7_3:76202086-76202105 Msa1124940:five_prime_UTR 40.0%
TTTAACACCTATGGGGATAC+CGG - chr7_3:76202118-76202137 Msa1124940:five_prime_UTR 40.0%
CAAGGTCATCTTCATCCAAA+CGG - chr7_3:76202162-76202181 Msa1124940:five_prime_UTR 40.0%
GCATAATATTATCCGCCGTT+TGG + chr7_3:76202180-76202199 None:intergenic 40.0%
TGCGATGGGCGATTACTATT+GGG + chr7_3:76195410-76195429 None:intergenic 45.0%
AGTAGAAGAAAGGCTGCGAT+GGG + chr7_3:76195424-76195443 None:intergenic 45.0%
GGATCGAGAGAGTAGAAGAA+AGG + chr7_3:76195434-76195453 None:intergenic 45.0%
TGTAGCTCATCGATCAATCG+AGG + chr7_3:76195830-76195849 None:intergenic 45.0%
TGAGGAAACGTTCGTGAAGT+TGG + chr7_3:76195866-76195885 None:intergenic 45.0%
AACGACAACAACCTACCTCT+GGG - chr7_3:76195885-76195904 Msa1124940:three_prime_UTR 45.0%
! GACTCTGAAAGTAGTGATGG+TGG - chr7_3:76195953-76195972 Msa1124940:intron 45.0%
!! TCTGAAAGTAGTGATGGTGG+CGG - chr7_3:76195956-76195975 Msa1124940:intron 45.0%
TGCTGGAGAGAATCTTTCTG+CGG - chr7_3:76196090-76196109 Msa1124940:CDS 45.0%
!! TTTCTGAAACCCACTTGGGT+TGG - chr7_3:76196420-76196439 Msa1124940:CDS 45.0%
GAATCAAACCAGAGACCTTG+AGG + chr7_3:76196484-76196503 None:intergenic 45.0%
ATTCTCCCCAGTACCAACTT+GGG - chr7_3:76196500-76196519 Msa1124940:CDS 45.0%
! CTAAACTAGCCTACCCAAGT+TGG + chr7_3:76196516-76196535 None:intergenic 45.0%
ATGGACTCCATTAGGATACC+GGG + chr7_3:76196737-76196756 None:intergenic 45.0%
CAAGTGGCGTTATTGAAACG+TGG - chr7_3:76196767-76196786 Msa1124940:CDS 45.0%
! TCTTTGGAAACGTGTGTGTG+TGG - chr7_3:76196845-76196864 Msa1124940:CDS 45.0%
! CTTTGGAAACGTGTGTGTGT+GGG - chr7_3:76196846-76196865 Msa1124940:CDS 45.0%
! GATAAAGCGAAGGCAGCTTT+TGG + chr7_3:76197125-76197144 None:intergenic 45.0%
CTCCTGTCCATTCAAGTATG+AGG - chr7_3:76197556-76197575 Msa1124940:CDS 45.0%
TGCCTCATACTTGAATGGAC+AGG + chr7_3:76197561-76197580 None:intergenic 45.0%
AATCATTTCACCTACCCTGC+TGG + chr7_3:76197778-76197797 None:intergenic 45.0%
! CTGCCATCAACTTTTGAGCT+TGG - chr7_3:76197923-76197942 Msa1124940:intron 45.0%
! GATAAGTACTGTGAACCGGA+AGG + chr7_3:76198199-76198218 None:intergenic 45.0%
CCAGAGATAGGGTGTAGAAA+AGG + chr7_3:76198370-76198389 None:intergenic 45.0%
! CCTTTTCTACACCCTATCTC+TGG - chr7_3:76198367-76198386 Msa1124940:intron 45.0%
ATGCAAATGAAGACGCAGAG+AGG - chr7_3:76198471-76198490 Msa1124940:intron 45.0%
ACCTTATCCGGGCAAAGAAA+TGG - chr7_3:76198793-76198812 Msa1124940:CDS 45.0%
ACCATTTCTTTGCCCGGATA+AGG + chr7_3:76198797-76198816 None:intergenic 45.0%
GCTGAAACCATTTCTTTGCC+CGG + chr7_3:76198803-76198822 None:intergenic 45.0%
! AGCACCGAAGTCTGTGAATT+TGG - chr7_3:76198849-76198868 Msa1124940:CDS 45.0%
GCAGTGCAATGTCAAAGAAC+TGG - chr7_3:76198890-76198909 Msa1124940:CDS 45.0%
CTGGAAAAATTCGGAGGAAG+AGG - chr7_3:76198909-76198928 Msa1124940:CDS 45.0%
GATGGCCGATGAAGACAATT+TGG - chr7_3:76199011-76199030 Msa1124940:CDS 45.0%
TAATCAAGACCCATTCACCC+TGG - chr7_3:76199229-76199248 Msa1124940:CDS 45.0%
CTATCACAATAGGGTGGGAA+AGG - chr7_3:76199469-76199488 Msa1124940:intron 45.0%
GTAAGACAGAACTGTGACCA+AGG - chr7_3:76199529-76199548 Msa1124940:intron 45.0%
TCTATGCATGACTCTTTCCG+TGG - chr7_3:76199588-76199607 Msa1124940:intron 45.0%
CTATGCATGACTCTTTCCGT+GGG - chr7_3:76199589-76199608 Msa1124940:intron 45.0%
AACTTGGCATAAGATACCCC+AGG - chr7_3:76199702-76199721 Msa1124940:intron 45.0%
GGTGTAATTGTAGAGTCCTG+GGG + chr7_3:76199721-76199740 None:intergenic 45.0%
! CAATTGGGTGTGTGATTTGG+AGG + chr7_3:76199916-76199935 None:intergenic 45.0%
CTCCAAATCACACACCCAAT+TGG - chr7_3:76199914-76199933 Msa1124940:intron 45.0%
CACACACCCAATTGGAACAA+AGG - chr7_3:76199922-76199941 Msa1124940:intron 45.0%
AACAACTACCATCATCTGGG+GGG - chr7_3:76199972-76199991 Msa1124940:intron 45.0%
!! GGGGGCATTCATCATTATCA+TGG - chr7_3:76199990-76200009 Msa1124940:CDS 45.0%
GAATGCTTGGGTAAGCCATT+AGG + chr7_3:76200088-76200107 None:intergenic 45.0%
ATTCAAATTCTTCGGCTGCG+AGG - chr7_3:76200104-76200123 Msa1124940:CDS 45.0%
! TTGCTGCTGTCCCGTAATTT+TGG + chr7_3:76200173-76200192 None:intergenic 45.0%
!! AGGTGAAGACTGTTCTGAAG+GGG + chr7_3:76200218-76200237 None:intergenic 45.0%
CGTATTGTTACTGGCACTGT+TGG + chr7_3:76200256-76200275 None:intergenic 45.0%
CCAAATTACGCATCGAAGGA+GGG + chr7_3:76200282-76200301 None:intergenic 45.0%
TCAGCCAAATTACGCATCGA+AGG + chr7_3:76200286-76200305 None:intergenic 45.0%
TGAACATTGGAACGAATGGC+AGG + chr7_3:76200385-76200404 None:intergenic 45.0%
TGCCATTCGTTCCAATGTTC+AGG - chr7_3:76200384-76200403 Msa1124940:intron 45.0%
TCACAAGAGAAGGATATGCG+GGG - chr7_3:76200424-76200443 Msa1124940:intron 45.0%
GAAATTAATGTGGTCGGGGA+AGG + chr7_3:76200721-76200740 None:intergenic 45.0%
ATTTGGAGAACCTAGTGACG+CGG + chr7_3:76200758-76200777 None:intergenic 45.0%
GAAGGCTGGAAAGAAGCAAA+AGG - chr7_3:76200813-76200832 Msa1124940:intron 45.0%
CGATTGTTGGAGGAAGTAGA+TGG + chr7_3:76200850-76200869 None:intergenic 45.0%
TCTACTTCCTCCAACAATCG+TGG - chr7_3:76200850-76200869 Msa1124940:intron 45.0%
AACTACAGTGCCAAGTGAGA+CGG - chr7_3:76200984-76201003 Msa1124940:intron 45.0%
GAAACAGGAACTGAAGCAAC+TGG + chr7_3:76201060-76201079 None:intergenic 45.0%
AGCATCATCTGCCTCAATTC+TGG + chr7_3:76201106-76201125 None:intergenic 45.0%
GATGAACTCCCACATCATTG+CGG - chr7_3:76201246-76201265 Msa1124940:intron 45.0%
CACAATCACCGCAATGATGT+GGG + chr7_3:76201257-76201276 None:intergenic 45.0%
GGTATGCAACATCAGATGAC+TGG - chr7_3:76201376-76201395 Msa1124940:intron 45.0%
ACATCAGATGACTGGATTGC+TGG - chr7_3:76201384-76201403 Msa1124940:intron 45.0%
TCTCGCTATCTGGATTGTTC+AGG + chr7_3:76201605-76201624 None:intergenic 45.0%
GAACAATCCAGATAGCGAGA+TGG - chr7_3:76201605-76201624 Msa1124940:intron 45.0%
CTACTTTCCATCTCGCTATC+TGG + chr7_3:76201615-76201634 None:intergenic 45.0%
ATTGGACCTGCTCTTTATGC+AGG - chr7_3:76201800-76201819 Msa1124940:CDS 45.0%
CATGTTCCTGCATAAAGAGC+AGG + chr7_3:76201809-76201828 None:intergenic 45.0%
CTTGTATTGCATTGGAGCCA+AGG - chr7_3:76201841-76201860 Msa1124940:CDS 45.0%
TAGGAAAGCAGCTAAGGCAA+TGG + chr7_3:76201942-76201961 None:intergenic 45.0%
ACTGCTTAGGAAAGCAGCTA+AGG + chr7_3:76201948-76201967 None:intergenic 45.0%
TTAACACCTATGGGGATACC+GGG - chr7_3:76202119-76202138 Msa1124940:five_prime_UTR 45.0%
GTAGCATAGCGCACAACATT+TGG + chr7_3:76202397-76202416 None:intergenic 45.0%
!! TATTATTATAATCAAATAAA+AGG + chr7_3:76197259-76197278 None:intergenic 5.0%
GCGATGGGCGATTACTATTG+GGG + chr7_3:76195409-76195428 None:intergenic 50.0%
CTGCGATGGGCGATTACTAT+TGG + chr7_3:76195411-76195430 None:intergenic 50.0%
GAGTAGAAGAAAGGCTGCGA+TGG + chr7_3:76195425-76195444 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr7_3:76195470-76195489 None:intergenic 50.0%
AATCGAGGTTTCTTCGCACC+TGG + chr7_3:76195815-76195834 None:intergenic 50.0%
GAGGTAGGTTGTTGTCGTTG+AGG + chr7_3:76195884-76195903 None:intergenic 50.0%
CAACGACAACAACCTACCTC+TGG - chr7_3:76195884-76195903 Msa1124940:three_prime_UTR 50.0%
ACGACAACAACCTACCTCTG+GGG - chr7_3:76195886-76195905 Msa1124940:three_prime_UTR 50.0%
GTTGCTACGATGTTGTCGTC+TGG - chr7_3:76195908-76195927 Msa1124940:three_prime_UTR 50.0%
CTACGATGTTGTCGTCTGGT+AGG - chr7_3:76195912-76195931 Msa1124940:three_prime_UTR 50.0%
TGAGTCACCAGCTCTTGATG+CGG + chr7_3:76196004-76196023 None:intergenic 50.0%
AGAGCTGGTGACTCAGTACA+AGG - chr7_3:76196009-76196028 Msa1124940:intron 50.0%
!! TCGATTGCTGGTGCTGTTTG+TGG - chr7_3:76196118-76196137 Msa1124940:CDS 50.0%
ATCATCAGGCCAACCCAAGT+GGG + chr7_3:76196432-76196451 None:intergenic 50.0%
!! TTGGGTTGGCCTGATGATGT+TGG - chr7_3:76196434-76196453 Msa1124940:CDS 50.0%
! TTGGCCTGATGATGTTGGCT+TGG - chr7_3:76196439-76196458 Msa1124940:CDS 50.0%
!! TGGCCTGATGATGTTGGCTT+GGG - chr7_3:76196440-76196459 Msa1124940:CDS 50.0%
!! ATGATGTTGGCTTGGGACCT+TGG - chr7_3:76196447-76196466 Msa1124940:CDS 50.0%
! TTGAGGAGGAGCACAATCCA+AGG + chr7_3:76196467-76196486 None:intergenic 50.0%
TTGGATTGTGCTCCTCCTCA+AGG - chr7_3:76196466-76196485 Msa1124940:CDS 50.0%
TCAAACCAGAGACCTTGAGG+AGG + chr7_3:76196481-76196500 None:intergenic 50.0%
GATTCTCCCCAGTACCAACT+TGG - chr7_3:76196499-76196518 Msa1124940:CDS 50.0%
!! AGCCTACCCAAGTTGGTACT+GGG + chr7_3:76196509-76196528 None:intergenic 50.0%
!! TAGCCTACCCAAGTTGGTAC+TGG + chr7_3:76196510-76196529 None:intergenic 50.0%
TAGGTACCAGGTTTGGGTAC+TGG - chr7_3:76196711-76196730 Msa1124940:CDS 50.0%
GTGGTGCTCTATCATTCTCC+TGG - chr7_3:76196786-76196805 Msa1124940:CDS 50.0%
GGTGTTCGTGTGTATGACGT+GGG - chr7_3:76196867-76196886 Msa1124940:CDS 50.0%
GTGTTCGTGTGTATGACGTG+GGG - chr7_3:76196868-76196887 Msa1124940:CDS 50.0%
! GCTTTTGGTCACTTGGAACC+TGG + chr7_3:76197110-76197129 None:intergenic 50.0%
! GAAGGCAGCTTTTGGTCACT+TGG + chr7_3:76197117-76197136 None:intergenic 50.0%
GGAACTCAACTTCAATCCCG+CGG - chr7_3:76197638-76197657 Msa1124940:CDS 50.0%
AACTTCAATCCCGCGGTCAA+TGG - chr7_3:76197645-76197664 Msa1124940:CDS 50.0%
AGAAGCTGAACCATTGACCG+CGG + chr7_3:76197658-76197677 None:intergenic 50.0%
TTAAGCCTAGGATCCAGCCA+TGG + chr7_3:76198524-76198543 None:intergenic 50.0%
!! GTTCCTGAAAAGAGCATCGG+CGG - chr7_3:76198673-76198692 Msa1124940:intron 50.0%
!! GGTTCAGGTGTTGGAAGAAC+CGG - chr7_3:76198742-76198761 Msa1124940:CDS 50.0%
GTGTTGGAAGAACCGGAAGT+AGG - chr7_3:76198749-76198768 Msa1124940:CDS 50.0%
AGAACCGGAAGTAGGCTCAT+TGG - chr7_3:76198757-76198776 Msa1124940:CDS 50.0%
! GGTGTTGCAGAGACCTTATC+CGG - chr7_3:76198781-76198800 Msa1124940:CDS 50.0%
GTGTTGCAGAGACCTTATCC+GGG - chr7_3:76198782-76198801 Msa1124940:CDS 50.0%
GGAGGAAGAGGAGTTCATGT+GGG - chr7_3:76198921-76198940 Msa1124940:CDS 50.0%
AGAGGAGTTCATGTGGGATG+AGG - chr7_3:76198927-76198946 Msa1124940:CDS 50.0%
ACAACTTGAGCTCAGACCCA+TGG - chr7_3:76198989-76199008 Msa1124940:CDS 50.0%
TGTCTTCATCGGCCATCCAT+GGG + chr7_3:76199008-76199027 None:intergenic 50.0%
TTGTCTTCATCGGCCATCCA+TGG + chr7_3:76199009-76199028 None:intergenic 50.0%
CAAAACCAGCCAGGGTGAAT+GGG + chr7_3:76199241-76199260 None:intergenic 50.0%
TCAAAACCAGCCAGGGTGAA+TGG + chr7_3:76199242-76199261 None:intergenic 50.0%
ATCATGGGAGTTGCAGAAGC+AGG - chr7_3:76200006-76200025 Msa1124940:CDS 50.0%
GTTGGAGACTGTTGTCGCAA+AGG + chr7_3:76200238-76200257 None:intergenic 50.0%
GGAGGGTTGCGTATTGTTAC+TGG + chr7_3:76200265-76200284 None:intergenic 50.0%
CCCTCCTTCGATGCGTAATT+TGG - chr7_3:76200279-76200298 Msa1124940:intron 50.0%
GCCAAATTACGCATCGAAGG+AGG + chr7_3:76200283-76200302 None:intergenic 50.0%
ATTGGAACGAATGGCAGGCA+CGG + chr7_3:76200380-76200399 None:intergenic 50.0%
! AGCTGCTGTTGCTGAGGTTT+TGG + chr7_3:76200478-76200497 None:intergenic 50.0%
AAAACCTCAGCAACAGCAGC+TGG - chr7_3:76200477-76200496 Msa1124940:intron 50.0%
AAACCTCAGCAACAGCAGCT+GGG - chr7_3:76200478-76200497 Msa1124940:intron 50.0%
TTTAAGCCTACTCGGTCAGG+TGG - chr7_3:76200694-76200713 Msa1124940:intron 50.0%
!!! TGCGGTAGTTTTGGCAGAGT+AGG + chr7_3:76200790-76200809 None:intergenic 50.0%
ACTCTGCCAAAACTACCGCA+AGG - chr7_3:76200790-76200809 Msa1124940:intron 50.0%
CTCTGCCAAAACTACCGCAA+GGG - chr7_3:76200791-76200810 Msa1124940:intron 50.0%
TTCTTTCCAGCCTTCCCTTG+CGG + chr7_3:76200808-76200827 None:intergenic 50.0%
TGATGCACCACGATTGTTGG+AGG + chr7_3:76200860-76200879 None:intergenic 50.0%
AGCTGATGCACCACGATTGT+TGG + chr7_3:76200863-76200882 None:intergenic 50.0%
GCGAAAGGTTTGATATCCGC+AGG - chr7_3:76200949-76200968 Msa1124940:intron 50.0%
!! AGTTGCTGACTCTGTTCCTG+CGG + chr7_3:76200968-76200987 None:intergenic 50.0%
ACTGGGACAGCTGAAGAAAC+AGG + chr7_3:76201075-76201094 None:intergenic 50.0%
TGAGGCAGATGATGCTGCAA+AGG - chr7_3:76201110-76201129 Msa1124940:intron 50.0%
TGATTGAGACAAGGCAAGCG+AGG + chr7_3:76201136-76201155 None:intergenic 50.0%
CCACAATCACCGCAATGATG+TGG + chr7_3:76201258-76201277 None:intergenic 50.0%
CCACATCATTGCGGTGATTG+TGG - chr7_3:76201255-76201274 Msa1124940:intron 50.0%
AGATGACTGGATTGCTGGCA+AGG - chr7_3:76201389-76201408 Msa1124940:intron 50.0%
CGGGAGTCAATTGGACACTA+TGG - chr7_3:76201476-76201495 Msa1124940:intron 50.0%
AAGGGACGAGTGGATGTTCA+AGG - chr7_3:76201569-76201588 Msa1124940:intron 50.0%
AGGGACGAGTGGATGTTCAA+GGG - chr7_3:76201570-76201589 Msa1124940:intron 50.0%
GGGTACCCTTGATAAGCTTC+TGG + chr7_3:76201872-76201891 None:intergenic 50.0%
!! GAAGCTTATCAAGGGTACCC+AGG - chr7_3:76201872-76201891 Msa1124940:CDS 50.0%
TAACACCTATGGGGATACCG+GGG - chr7_3:76202120-76202139 Msa1124940:five_prime_UTR 50.0%
GGTCATCTTCATCCAAACGG+CGG - chr7_3:76202165-76202184 Msa1124940:five_prime_UTR 50.0%
ATCGTAGCAACCCCAGAGGT+AGG + chr7_3:76195899-76195918 None:intergenic 55.0%
CAACATCGTAGCAACCCCAG+AGG + chr7_3:76195903-76195922 None:intergenic 55.0%
!! GAAAGTAGTGATGGTGGCGG+TGG - chr7_3:76195959-76195978 Msa1124940:intron 55.0%
TCTGCGGCGAAATCGATTGC+TGG - chr7_3:76196106-76196125 Msa1124940:CDS 55.0%
CATCATCAGGCCAACCCAAG+TGG + chr7_3:76196433-76196452 None:intergenic 55.0%
GGTCCCAAGCCAACATCATC+AGG + chr7_3:76196446-76196465 None:intergenic 55.0%
TCCCCAGTACCAACTTGGGT+AGG - chr7_3:76196504-76196523 Msa1124940:CDS 55.0%
!! GCCTACCCAAGTTGGTACTG+GGG + chr7_3:76196508-76196527 None:intergenic 55.0%
! GTACTGGCCCGGTATCCTAA+TGG - chr7_3:76196727-76196746 Msa1124940:CDS 55.0%
GGGTGTTCGTGTGTATGACG+TGG - chr7_3:76196866-76196885 Msa1124940:CDS 55.0%
! CTTTGCTGTCAGACTACCCG+AGG - chr7_3:76197191-76197210 Msa1124940:CDS 55.0%
GAAGCTGAACCATTGACCGC+GGG + chr7_3:76197657-76197676 None:intergenic 55.0%
AACGTCTTCAGCAGTCCAGC+AGG - chr7_3:76197760-76197779 Msa1124940:CDS 55.0%
ACGTCTTCAGCAGTCCAGCA+GGG - chr7_3:76197761-76197780 Msa1124940:CDS 55.0%
AGAGAGGCCAGATCGAGCTT+TGG - chr7_3:76198487-76198506 Msa1124940:intron 55.0%
GAGAGGCCAGATCGAGCTTT+GGG - chr7_3:76198488-76198507 Msa1124940:intron 55.0%
ACCGGAAGTAGGCTCATTGG+CGG - chr7_3:76198760-76198779 Msa1124940:CDS 55.0%
ACCGCCAATGAGCCTACTTC+CGG + chr7_3:76198764-76198783 None:intergenic 55.0%
CGGAGGAAGAGGAGTTCATG+TGG - chr7_3:76198920-76198939 Msa1124940:CDS 55.0%
ATGTGGGATGAGGTGAACCC+TGG - chr7_3:76198937-76198956 Msa1124940:CDS 55.0%
CTTGAGCTCAGACCCATGGA+TGG - chr7_3:76198993-76199012 Msa1124940:CDS 55.0%
GATGAATGCCCCCCAGATGA+TGG + chr7_3:76199983-76200002 None:intergenic 55.0%
TTGGAACGAATGGCAGGCAC+GGG + chr7_3:76200379-76200398 None:intergenic 55.0%
ACAGCAGCTGGGTTCTTCAC+AGG - chr7_3:76200489-76200508 Msa1124940:intron 55.0%
CCACTCTTCACAGATGGAGC+TGG + chr7_3:76200610-76200629 None:intergenic 55.0%
CCAGCTCCATCTGTGAAGAG+TGG - chr7_3:76200607-76200626 Msa1124940:CDS 55.0%
GGGTTTAAGCCTACTCGGTC+AGG - chr7_3:76200691-76200710 Msa1124940:intron 55.0%
GCCAAAACTACCGCAAGGGA+AGG - chr7_3:76200795-76200814 Msa1124940:intron 55.0%
! GCCTTCCCTTGCGGTAGTTT+TGG + chr7_3:76200799-76200818 None:intergenic 55.0%
AAACTACCGCAAGGGAAGGC+TGG - chr7_3:76200799-76200818 Msa1124940:intron 55.0%
GATCGCATCACCGTCTCACT+TGG + chr7_3:76200997-76201016 None:intergenic 55.0%
ACTGTCAGGAAAGGGACGAG+TGG - chr7_3:76201559-76201578 Msa1124940:intron 55.0%
GGGACGAGTGGATGTTCAAG+GGG - chr7_3:76201571-76201590 Msa1124940:intron 55.0%
GGACGAGTGGATGTTCAAGG+GGG - chr7_3:76201572-76201591 Msa1124940:intron 55.0%
AACACCTATGGGGATACCGG+GGG - chr7_3:76202121-76202140 Msa1124940:five_prime_UTR 55.0%
CTTGATGCGGCGGTGGTTGA+GGG + chr7_3:76195991-76196010 None:intergenic 60.0%
TCTTGATGCGGCGGTGGTTG+AGG + chr7_3:76195992-76196011 None:intergenic 60.0%
GTCACCAGCTCTTGATGCGG+CGG + chr7_3:76196001-76196020 None:intergenic 60.0%
GTGCTCCTCCTCAAGGTCTC+TGG - chr7_3:76196473-76196492 Msa1124940:CDS 60.0%
!! ACCAGGTTTGGGTACTGGCC+CGG - chr7_3:76196716-76196735 Msa1124940:CDS 60.0%
CTTCAGCAGTCCAGCAGGGT+AGG - chr7_3:76197765-76197784 Msa1124940:CDS 60.0%
GCAGCACCCAAAGCTCGATC+TGG + chr7_3:76198497-76198516 None:intergenic 60.0%
! CTTTGGGTGCTGCACGTCCA+TGG - chr7_3:76198504-76198523 Msa1124940:intron 60.0%
CACGTCCATGGCTGGATCCT+AGG - chr7_3:76198516-76198535 Msa1124940:intron 60.0%
! GCTCCGCCGATGCTCTTTTC+AGG + chr7_3:76198679-76198698 None:intergenic 60.0%
!! AAGAGCATCGGCGGAGCCTA+TGG - chr7_3:76198682-76198701 Msa1124940:intron 60.0%
CAAGACCCATTCACCCTGGC+TGG - chr7_3:76199233-76199252 Msa1124940:CDS 60.0%
GAACCCAGCTGCTGTTGCTG+AGG + chr7_3:76200484-76200503 None:intergenic 60.0%
GAAGGACCACCTGACCGAGT+AGG + chr7_3:76200703-76200722 None:intergenic 60.0%
TGGAGAACCTAGTGACGCGG+CGG + chr7_3:76200755-76200774 None:intergenic 60.0%
ACACCTATGGGGATACCGGG+GGG - chr7_3:76202122-76202141 Msa1124940:five_prime_UTR 60.0%
ACCACCGCCGCATCAAGAGC+TGG - chr7_3:76195994-76196013 Msa1124940:intron 65.0%
ACCAGCTCTTGATGCGGCGG+TGG + chr7_3:76195998-76196017 None:intergenic 65.0%
ACCGGGCCAGTACCCAAACC+TGG + chr7_3:76196720-76196739 None:intergenic 65.0%
GGCGGAGCCTATGGAGACGA+TGG - chr7_3:76198691-76198710 Msa1124940:intron 65.0%
GGAGAACCTAGTGACGCGGC+GGG + chr7_3:76200754-76200773 None:intergenic 65.0%
CACCTATGGGGATACCGGGG+GGG - chr7_3:76202123-76202142 Msa1124940:five_prime_UTR 65.0%
ACCTATGGGGATACCGGGGG+GGG - chr7_3:76202124-76202143 Msa1124940:five_prime_UTR 65.0%
GATGCGGCGGTGGTTGAGGG+TGG + chr7_3:76195988-76196007 None:intergenic 70.0%
! GGGTGCTGCACGTCCATGGC+TGG - chr7_3:76198508-76198527 Msa1124940:intron 70.0%
CCTATGGGGATACCGGGGGG+GGG - chr7_3:76202125-76202144 Msa1124940:five_prime_UTR 70.0%
CTATGGGGATACCGGGGGGG+GGG - chr7_3:76202126-76202145 Msa1124940:five_prime_UTR 70.0%
TATGGGGATACCGGGGGGGG+GGG - chr7_3:76202127-76202146 Msa1124940:five_prime_UTR 70.0%
GGGTCTCCCGCCGCGTCACT+AGG - chr7_3:76200745-76200764 Msa1124940:intron 75.0%
CCCCCCCCCGGTATCCCCAT+AGG + chr7_3:76202128-76202147 None:intergenic 75.0%
ATGGGGATACCGGGGGGGGG+GGG - chr7_3:76202128-76202147 Msa1124940:five_prime_UTR 75.0%
! GGGGGGGGGGGTACACAGCA+AGG - chr7_3:76202144-76202163 Msa1124940:five_prime_UTR 75.0%
! TGGGGATACCGGGGGGGGGG+GGG - chr7_3:76202129-76202148 Msa1124940:five_prime_UTR 80.0%
! GGGGATACCGGGGGGGGGGG+GGG - chr7_3:76202130-76202149 Msa1124940:five_prime_UTR 85.0%
! GGGATACCGGGGGGGGGGGG+GGG - chr7_3:76202131-76202150 Msa1124940:five_prime_UTR 85.0%
! GGATACCGGGGGGGGGGGGG+GGG - chr7_3:76202132-76202151 Msa1124940:five_prime_UTR 85.0%
! GTGTACCCCCCCCCCCCCCC+CGG + chr7_3:76202140-76202159 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 76195351 76202418 76195351 ID=Msa1124940;Name=Msa1124940
chr7_3 mRNA 76195351 76202418 76195351 ID=Msa1124940-mRNA-1;Parent=Msa1124940;Name=Msa1124940-mRNA-1;_AED=0.02;_eAED=0.02;_QI=416|1|1|1|0.85|0.75|8|565|1026
chr7_3 exon 76195351 76195618 76195351 ID=Msa1124940-mRNA-1:exon:20718;Parent=Msa1124940-mRNA-1
chr7_3 exon 76195639 76195947 76195639 ID=Msa1124940-mRNA-1:exon:20717;Parent=Msa1124940-mRNA-1
chr7_3 exon 76196068 76197870 76196068 ID=Msa1124940-mRNA-1:exon:20716;Parent=Msa1124940-mRNA-1
chr7_3 exon 76198737 76199135 76198737 ID=Msa1124940-mRNA-1:exon:20715;Parent=Msa1124940-mRNA-1
chr7_3 exon 76199219 76199338 76199219 ID=Msa1124940-mRNA-1:exon:20714;Parent=Msa1124940-mRNA-1
chr7_3 exon 76199987 76200244 76199987 ID=Msa1124940-mRNA-1:exon:20713;Parent=Msa1124940-mRNA-1
chr7_3 exon 76200557 76200658 76200557 ID=Msa1124940-mRNA-1:exon:20712;Parent=Msa1124940-mRNA-1
chr7_3 exon 76201616 76202418 76201616 ID=Msa1124940-mRNA-1:exon:20711;Parent=Msa1124940-mRNA-1
chr7_3 five_prime_UTR 76202003 76202418 76202003 ID=Msa1124940-mRNA-1:five_prime_utr;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76201616 76202002 76201616 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76200557 76200658 76200557 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76199987 76200244 76199987 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76199219 76199338 76199219 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76198737 76199135 76198737 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76196068 76197870 76196068 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 CDS 76195936 76195947 76195936 ID=Msa1124940-mRNA-1:cds;Parent=Msa1124940-mRNA-1
chr7_3 three_prime_UTR 76195639 76195935 76195639 ID=Msa1124940-mRNA-1:three_prime_utr;Parent=Msa1124940-mRNA-1
chr7_3 three_prime_UTR 76195351 76195618 76195351 ID=Msa1124940-mRNA-1:three_prime_utr;Parent=Msa1124940-mRNA-1
Gene Sequence

>Msa1124940

ATGAACATGGAAAATTCTCGTAGATCTTTAGATAGATCGAGAGAACCAGGTGCGAAGAAACCTCGATTGATCGATGAGCTACAACAAGGTTCCAATCCAACTTCACGAACGTTTCCTCAACGACAACAACCTACCTCTGGGGTTGCTACGATGTTGTCGTCTGGTAGGTTTCGAATGAATGATAGAGACTCTGAAAGTAGTGATGGTGGCGGTGGTTACCACCCTCAACCACCGCCGCATCAAGAGCTGGTGACTCAGTACAAGGCTGCTCTTGCTGAGCTTACTTTTAACTCGAAACCGATAATTACTAATTTGACTATAATTGCTGGAGAGAATCTTTCTGCGGCGAAATCGATTGCTGGTGCTGTTTGTGGTAACATTCTTGAGGTTCCAAGTGACCAAAAGCTGCCTTCGCTTTATCTCTTAGACAGTATTGTTAAGAATATTGGGCGGGATTACATAAAATACTTTGCTGTCAGACTACCCGAGGTATTCTGCAATACATACAGACAGGTTGATACTCCTGTCCATTCAAGTATGAGGCATCTTTTTGGAACTTGGAGAGGAGTCTTTCCTCCTCAGACTCTTCAGATAATTGAGAAGGAACTCAACTTCAATCCCGCGGTCAATGGTTCAGCTTCTGCATCTGCTACCCTTAGAAGTGATTCTCAGTCTCAACGCCCATCTCATAGCATCCATGTGAATCCCAAATATTTAGAAAGGCAACGTCTTCAGCAGTCCAGCAGGACTAAAGGAGTATTTGATGATATGGCTGGAGTTATTTCAAATGCAAATGAAGACGCAGAGAGGCCAGATCGAGCTTTGGGTGCTGCACGTCCATGGCTGGATCCTAGGCTTAACATGCATAATAATCAGCATACTCATAGAGGTGCACTTAATGACTCTGTTCCTGAAAAGAGCATCGGCGGAGCCTATGGAGACGATGGATATAATTCTAGTGTTTCAAATAGTTTGGGTTCAGGTGTTGGAAGAACCGGAAGTAGGCTCATTGGCGGTGTTGCAGAGACCTTATCCGGGCAAAGAAATGGTTTCAGCCTCAAACATAGTTTTTCAAATCATGAAGCACCGAAGTCTGTGAATTTGGATGCACATAGCATAAGGAGCAGTGCAATGTCAAAGAACTGGAAAAATTCGGAGGAAGAGGAGTTCATGTGGGATGAGGTGAACCCTGGTTTGTCTGATAATGTACCTAATGTCTCTAACAACTTGAGCTCAGACCCATGGATGGCCGATGAAGACAATTTGGAAAGTGAAGATCACCTCCAAATCACACACCCAATTGGAACAAAGGTTAATAAAGGAATATCCACTGTTAAGAAACAACTACCATCATCTGGGGGGCATTCATCATTATCATGGGAGTTGCAGAAGCAGGTCCCAAGTGCCAAATTGAATATGAAGCCAGGTCACTCAGAAATATTTGTTTCTGCTCCTAATGGCTTACCCAAGCATTCAAATTCTTCGGCTGCGAGGATAAGAAATCAGTCTTCTATGCCGCATACAACAATAGGAATGTCCAAAATTACGGGACAGCAGCAATTTGATTCTGAGGGGACAGAGTCCCCTTCAGAACAGTCTTCACCTTTGCGACAACAGTCTCCAACAGTGCCAGTAACAATACGCAACCCTCCTTCGATGCGTAATTTGGCTGAGCAAGATTGTCCAACATCTCTTAAAACATCTCAACATTTGGGTGGTCTGCAAAGACAATATATTAGAGATCCCGTGCCTGCCATTCGTTCCAATGTTCAGGTTGGTAACTTGCGAAAATCACAAGAGAAGGATATGCGGGGTCCGTTATCTTTAGCAACTTCTTTTCAGCCAAAACCTCAGCAACAGCAGCTGGGTTCTTCACAGGCTGAAGTTACTCTTAAAGCTAAGCAGCCACTCAAATCTAAAGCTCCTTTAGTCAAAGCCAAAGTGACTTCAGAAAAGTCAACTACAAAGTGTCTTCCAGCTCCATCTGTGAAGAGTGGAATCATTCCCAATAAATCAATTACGAGAAGTCTGGATGCAAGTAACTGTCCATCTCAAATAGGGTTTAAGCCTACTCGGTCAGGTGGTCCTTCCCCGACCACATTAATTTCTTCGGGGTCTCCCGCCGCGTCACTAGGTTCTCCAAATGATTATTCACCTACTCTGCCAAAACTACCGCAAGGGAAGGCTGGAAAGAAGCAAAAGGATTCTACTCAACCATCTACTTCCTCCAACAATCGTGGTGCATCAGCTCCGAGCTCAAATACCGCCAATAAGAATACCTTGAATCCAATTTCAAATCTTTTAAGCTCGTTAGTTGCGAAAGGTTTGATATCCGCAGGAACAGAGTCAGCAACTACAGTGCCAAGTGAGACGGTGATGCGATCGAAAGACCAAACTGAAAGCATTGCTGTCAGTTCCTCTTTACCAGTTGCTTCAGTTCCTGTTTCTTCAGCTGTCCCAGTAAAATCTTCCAGAATTGAGGCAGATGATGCTGCAAAGGCCTCGCTTGCCTTGTCTCAATCAACTAGCACAGAAATTAGAAATCTCATTGGCTTTGATTTCAAACCTGATGTCATTCGAGAAATGCACCCACATGTAATCGAAGAATTATTGGATGAACTCCCACATCATTGCGGTGATTGTGGTATTAGGCTTAAACAACAAGAACAGTTTAATAGACACTTGGAATGGCATGCTACAAAAGAAAGAGAACAAAATGGTCTGATTGTAGCATCAAGAAGATGGTATGCAACATCAGATGACTGGATTGCTGGCAAGGCAGAATGTCTGTCTGAGTCTGAGTTTACTGATTCTGTAGATGAATATGATGATAATAAAACAGACGGGAGTCAATTGGACACTATGGTTGTAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTATACTGTCAGGAAAGGGACGAGTGGATGTTCAAGGGGGCTGTATACCTGAACAATCCAGATAGCGAGATGGAAAGTAGAAATGTGGGGCCCATCATTCATGCTAGATGCTTGTCAGATAACTCAATACTTGGTGTGACTAATACAGAACATGATTGA
Protein sequence

>Msa1124940

MNMENSRRSLDRSREPGAKKPRLIDELQQGSNPTSRTFPQRQQPTSGVATMLSSGRFRMNDRDSESSDGGGGYHPQPPPHQELVTQYKAALAELTFNSKPIITNLTIIAGENLSAAKSIAGAVCGNILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCNTYRQVDTPVHSSMRHLFGTWRGVFPPQTLQIIEKELNFNPAVNGSASASATLRSDSQSQRPSHSIHVNPKYLERQRLQQSSRTKGVFDDMAGVISNANEDAERPDRALGAARPWLDPRLNMHNNQHTHRGALNDSVPEKSIGGAYGDDGYNSSVSNSLGSGVGRTGSRLIGGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHSIRSSAMSKNWKNSEEEEFMWDEVNPGLSDNVPNVSNNLSSDPWMADEDNLESEDHLQITHPIGTKVNKGISTVKKQLPSSGGHSSLSWELQKQVPSAKLNMKPGHSEIFVSAPNGLPKHSNSSAARIRNQSSMPHTTIGMSKITGQQQFDSEGTESPSEQSSPLRQQSPTVPVTIRNPPSMRNLAEQDCPTSLKTSQHLGGLQRQYIRDPVPAIRSNVQVGNLRKSQEKDMRGPLSLATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCLPAPSVKSGIIPNKSITRSLDASNCPSQIGFKPTRSGGPSPTTLISSGSPAASLGSPNDYSPTLPKLPQGKAGKKQKDSTQPSTSSNNRGASAPSSNTANKNTLNPISNLLSSLVAKGLISAGTESATTVPSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEADDAAKASLALSQSTSTEIRNLIGFDFKPDVIREMHPHVIEELLDELPHHCGDCGIRLKQQEQFNRHLEWHATKEREQNGLIVASRRWYATSDDWIAGKAECLSESEFTDSVDEYDDNKTDGSQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGAVYLNNPDSEMESRNVGPIIHARCLSDNSILGVTNTEHD*