Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172430 | KEH23669.1 | 87.097 | 62 | 8 | 0 | 5 | 66 | 97 | 158 | 1.35e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172430 | sp|P44797|PUR8_HAEIN | 51.613 | 62 | 30 | 0 | 5 | 66 | 40 | 101 | 7.71e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1172430 | Msa1297760 | 0.825442 | 4.678164e-54 | -8.615850e-47 |
| Msa0506110 | Msa1172430 | 0.802519 | 5.399294e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172430 | MtrunA17_Chr7g0258371 | 87.097 | 62 | 8 | 0 | 5 | 66 | 97 | 158 | 2.12e-30 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172430 | AT4G18440.1 | 69.355 | 62 | 19 | 0 | 5 | 66 | 113 | 174 | 3.93e-23 | 90.9 |
| Msa1172430 | AT1G36280.1 | 59.677 | 62 | 25 | 0 | 5 | 66 | 104 | 165 | 8.96e-21 | 84.0 |
| Msa1172430 | AT1G36280.2 | 59.677 | 62 | 25 | 0 | 5 | 66 | 104 | 165 | 9.18e-21 | 84.0 |
Find 8 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGATGTTATAGATTAAA+TGG | 0.332162 | 8_1:-2435375 | Msa1172430:intron |
| TACGAATTAACAGAAATATC+AGG | 0.350563 | 8_1:-2436243 | Msa1172430:intron |
| TTTGAGAGGATTACAAATCA+TGG | 0.434827 | 8_1:-2435229 | Msa1172430:CDS |
| GATGCTAAGTCTTTCTTACA+AGG | 0.477759 | 8_1:-2435298 | Msa1172430:CDS |
| CAAGGTTTGATTGATGACTT+TGG | 0.488506 | 8_1:-2435280 | Msa1172430:CDS |
| CTTTGGTGAAGATGATGTTA+AGG | 0.496123 | 8_1:-2435263 | Msa1172430:CDS |
| TTAGCATCTTCACTAAAAGC+AGG | 0.579728 | 8_1:+2435313 | None:intergenic |
| TGAAATTAGTGAAGTCACTG+AGG | 0.710903 | 8_1:-2435338 | Msa1172430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATTATTTAAATTTTTC+GGG | - | chr8_1:2435389-2435408 | Msa1172430:intron | 10.0% |
| !!! | TTGAATTATTTAAATTTTTC+AGG | - | chr8_1:2435389-2435408 | Msa1172430:intron | 10.0% |
| !! | TTAATTAATGATGTTTATTT+CGG | - | chr8_1:2438640-2438659 | Msa1172430:intron | 10.0% |
| !!! | TATAATTTTATGTCGATTTT+AGG | + | chr8_1:2435457-2435476 | None:intergenic | 15.0% |
| !!! | AATTATTTAAATTTTTCAGG+TGG | - | chr8_1:2435506-2435525 | Msa1172430:intron | 15.0% |
| !!! | ATTATTTAAATTTTTCAGGT+GGG | - | chr8_1:2435507-2435526 | Msa1172430:intron | 15.0% |
| !!! | TCGTTGATTTTTTAATTTTT+CGG | - | chr8_1:2435617-2435636 | Msa1172430:intron | 15.0% |
| !!! | ATATATGTTTAGAGATATTT+TGG | + | chr8_1:2435802-2435821 | None:intergenic | 15.0% |
| !! | TATCTCTAAACATATATATT+TGG | - | chr8_1:2435805-2435824 | Msa1172430:intron | 15.0% |
| !! | TGAATATGATATTTATCATA+AGG | - | chr8_1:2437880-2437899 | Msa1172430:intron | 15.0% |
| !! | ATATATGATATTATATCCAA+TGG | - | chr8_1:2438228-2438247 | Msa1172430:intron | 15.0% |
| !!! | GTTGTTAAAATTTAATTTCT+GGG | + | chr8_1:2440175-2440194 | None:intergenic | 15.0% |
| !!! | GTTGTGAAAATTTAATTTTT+GGG | + | chr8_1:2440287-2440306 | None:intergenic | 15.0% |
| !! | AATATTAATTGAGTGAATTA+GGG | - | chr8_1:2440395-2440414 | Msa1172430:intron | 15.0% |
| !! | TTATGATGTTATAGATTAAA+TGG | - | chr8_1:2440593-2440612 | Msa1172430:intron | 15.0% |
| !! | CATCTATCTTGTAAATTAAT+CGG | - | chr8_1:2435208-2435227 | Msa1172430:CDS | 20.0% |
| !! | ATCTATCTTGTAAATTAATC+GGG | - | chr8_1:2435209-2435228 | Msa1172430:CDS | 20.0% |
| !!! | GACTTTAAACAATTTTTCAA+CGG | + | chr8_1:2435350-2435369 | None:intergenic | 20.0% |
| !!! | AATTATTTAAATTTTTCGGG+TGG | - | chr8_1:2435392-2435411 | Msa1172430:intron | 20.0% |
| !!! | ATTATTTAAATTTTTCGGGT+GGG | - | chr8_1:2435393-2435412 | Msa1172430:intron | 20.0% |
| !!! | GATTTTATACAATTTTGTGT+CGG | + | chr8_1:2435578-2435597 | None:intergenic | 20.0% |
| !!! | CGTTGATTTTTTAATTTTTC+GGG | - | chr8_1:2435618-2435637 | Msa1172430:intron | 20.0% |
| !!! | GTTGATTTTTTAATTTTTCG+GGG | - | chr8_1:2435619-2435638 | Msa1172430:intron | 20.0% |
| !!! | GTAATATAGTTTTACACTTT+TGG | + | chr8_1:2435725-2435744 | None:intergenic | 20.0% |
| !!! | TAAATTATCCAAGGTATTTT+TGG | + | chr8_1:2435913-2435932 | None:intergenic | 20.0% |
| !!! | GTTATTATTATTTTACCGTT+AGG | - | chr8_1:2436293-2436312 | Msa1172430:intron | 20.0% |
| !! | TTTGTAAATGGTTTAGTAAA+TGG | - | chr8_1:2436329-2436348 | Msa1172430:intron | 20.0% |
| !! | TTGTAAATGGTTTAGTAAAT+GGG | - | chr8_1:2436330-2436349 | Msa1172430:intron | 20.0% |
| !!! | ATCATGTAAAACTTGATTTT+CGG | - | chr8_1:2437560-2437579 | Msa1172430:intron | 20.0% |
| !! | AAATGTGGAATATATAAACT+TGG | - | chr8_1:2437587-2437606 | Msa1172430:intron | 20.0% |
| !! | AATGTGGAATATATAAACTT+GGG | - | chr8_1:2437588-2437607 | Msa1172430:intron | 20.0% |
| !!! | TTATATGATGAAGTTGATAT+TGG | - | chr8_1:2437956-2437975 | Msa1172430:intron | 20.0% |
| !! | AATGCATATATGTTAAGTAA+TGG | - | chr8_1:2438018-2438037 | Msa1172430:intron | 20.0% |
| !! | TTCTACATTTGTTTATGTTA+TGG | - | chr8_1:2439195-2439214 | Msa1172430:intron | 20.0% |
| !!! | TTTATATATGCATGTTGATT+TGG | - | chr8_1:2439330-2439349 | Msa1172430:intron | 20.0% |
| !! | TTTATCGCTTTAATAGAAAT+AGG | - | chr8_1:2439406-2439425 | Msa1172430:intron | 20.0% |
| !! | TTATCGCTTTAATAGAAATA+GGG | - | chr8_1:2439407-2439426 | Msa1172430:intron | 20.0% |
| !!! | AATTTTAACGAATACTAGTT+TGG | + | chr8_1:2439470-2439489 | None:intergenic | 20.0% |
| !!! | GTTAAAATTTTCTGTTGTAT+GGG | - | chr8_1:2439481-2439500 | Msa1172430:intron | 20.0% |
| !! | CAGTTTAATTGTCTTTAATA+TGG | - | chr8_1:2439581-2439600 | Msa1172430:intron | 20.0% |
| !! | AATTGTCTTTAATATGGATT+CGG | - | chr8_1:2439587-2439606 | Msa1172430:intron | 20.0% |
| !!! | ACATAAGATGATTTTGTTAT+CGG | - | chr8_1:2439811-2439830 | Msa1172430:intron | 20.0% |
| !!! | ATTTTGTTTTTGGATTTTGT+AGG | - | chr8_1:2439987-2440006 | Msa1172430:intron | 20.0% |
| !! | TGTACCAATTGTAAATTATT+GGG | + | chr8_1:2440025-2440044 | None:intergenic | 20.0% |
| !! | TTGTACCAATTGTAAATTAT+TGG | + | chr8_1:2440026-2440045 | None:intergenic | 20.0% |
| !!! | GGTTGTTAAAATTTAATTTC+TGG | + | chr8_1:2440176-2440195 | None:intergenic | 20.0% |
| !!! | GGTTGTGAAAATTTAATTTT+TGG | + | chr8_1:2440288-2440307 | None:intergenic | 20.0% |
| !! | GAATATTAATTGAGTGAATT+AGG | - | chr8_1:2440394-2440413 | Msa1172430:intron | 20.0% |
| !! | AAAAGAGTTCTTTAAACAAA+CGG | + | chr8_1:2440544-2440563 | None:intergenic | 20.0% |
| ! | TAAATTAATCGGGATATTCA+AGG | - | chr8_1:2435219-2435238 | Msa1172430:CDS | 25.0% |
| ! | TGTTAATAACTAAGAAATGG+TGG | + | chr8_1:2435282-2435301 | None:intergenic | 25.0% |
| ! | CACTGTTAATAACTAAGAAA+TGG | + | chr8_1:2435285-2435304 | None:intergenic | 25.0% |
| ! | CATTTCTTAGTTATTAACAG+TGG | - | chr8_1:2435283-2435302 | Msa1172430:CDS | 25.0% |
| !! | TTTTCAACGGTTAATTTTAG+TGG | + | chr8_1:2435337-2435356 | None:intergenic | 25.0% |
| !!! | TTTATGTCGATTTTAGGTTT+CGG | + | chr8_1:2435451-2435470 | None:intergenic | 25.0% |
| !!! | ATTTTTTAATTTTTCGGGGT+GGG | - | chr8_1:2435623-2435642 | Msa1172430:intron | 25.0% |
| ! | GCATCAAAATAACATGTAAA+TGG | + | chr8_1:2435678-2435697 | None:intergenic | 25.0% |
| !!! | TTGAGATTCATTTTTATGCA+CGG | + | chr8_1:2435869-2435888 | None:intergenic | 25.0% |
| ! | ATGATATTCCAAAAATACCT+TGG | - | chr8_1:2435902-2435921 | Msa1172430:intron | 25.0% |
| !! | TAACATTGGATGCATTTTAA+TGG | - | chr8_1:2436122-2436141 | Msa1172430:intron | 25.0% |
| !!! | GATGCATTTTAATGGATTTT+AGG | - | chr8_1:2436130-2436149 | Msa1172430:intron | 25.0% |
| !!! | TTAATGGATTTTAGGCAAAA+AGG | - | chr8_1:2436138-2436157 | Msa1172430:intron | 25.0% |
| !!! | TAATGGATTTTAGGCAAAAA+GGG | - | chr8_1:2436139-2436158 | Msa1172430:intron | 25.0% |
| !!! | TTTTGGTCATTTTGTAAGTA+AGG | - | chr8_1:2436164-2436183 | Msa1172430:intron | 25.0% |
| !!! | TTTGGTCATTTTGTAAGTAA+GGG | - | chr8_1:2436165-2436184 | Msa1172430:intron | 25.0% |
| ! | AGGGTAATTTAGTAATTTCA+AGG | - | chr8_1:2436184-2436203 | Msa1172430:intron | 25.0% |
| ! | AATTTAGTAATTTCAAGGTG+AGG | - | chr8_1:2436189-2436208 | Msa1172430:intron | 25.0% |
| ! | TAATAATAACGATCACTTAC+CGG | + | chr8_1:2436283-2436302 | None:intergenic | 25.0% |
| !! | GAGTAGAAACATTTTGTAAA+TGG | - | chr8_1:2436317-2436336 | Msa1172430:intron | 25.0% |
| !! | TCTTGTCTTTAGAGAAAAAT+AGG | - | chr8_1:2436409-2436428 | Msa1172430:intron | 25.0% |
| !!! | TTTCATAAGAATTTTGAGAG+AGG | - | chr8_1:2436443-2436462 | Msa1172430:intron | 25.0% |
| ! | ATTATTGTTCATTGAGGTAA+GGG | - | chr8_1:2436575-2436594 | Msa1172430:intron | 25.0% |
| ! | ATGATTATAAGTTGTGATTG+TGG | - | chr8_1:2436915-2436934 | Msa1172430:intron | 25.0% |
| !! | GAATAAATGAATTGTTGTTG+TGG | - | chr8_1:2437017-2437036 | Msa1172430:intron | 25.0% |
| !!! | CGAAACTTTAATTTTCCAAA+TGG | - | chr8_1:2437399-2437418 | Msa1172430:intron | 25.0% |
| ! | AATACAAGTTTCAAACCATT+TGG | + | chr8_1:2437417-2437436 | None:intergenic | 25.0% |
| !!! | TTTGTGTCGTTTAAGTTTTT+CGG | - | chr8_1:2437435-2437454 | Msa1172430:intron | 25.0% |
| !! | TCATGTAAAACTTGATTTTC+GGG | - | chr8_1:2437561-2437580 | Msa1172430:intron | 25.0% |
| ! | ATGTGGAATATATAAACTTG+GGG | - | chr8_1:2437589-2437608 | Msa1172430:intron | 25.0% |
| ! | AATCATGTAATCATGAACTT+AGG | + | chr8_1:2437672-2437691 | None:intergenic | 25.0% |
| !!! | TGCTTTGAAAATATCAATGT+TGG | - | chr8_1:2437736-2437755 | Msa1172430:intron | 25.0% |
| ! | TTGAAAATATCAATGTTGGT+CGG | - | chr8_1:2437740-2437759 | Msa1172430:intron | 25.0% |
| ! | CTATTCACGAAAGATTTATA+TGG | + | chr8_1:2437817-2437836 | None:intergenic | 25.0% |
| ! | ATTTCTCACAATCCAAATAA+GGG | + | chr8_1:2437919-2437938 | None:intergenic | 25.0% |
| ! | TTGCATATATGCTAAATGTT+TGG | - | chr8_1:2438055-2438074 | Msa1172430:intron | 25.0% |
| !!! | ACATGTTTATGTTTTGTTGT+TGG | - | chr8_1:2438109-2438128 | Msa1172430:intron | 25.0% |
| !! | TGTTGAATATTGATTGTTAG+TGG | - | chr8_1:2438139-2438158 | Msa1172430:intron | 25.0% |
| !!! | AATTTTGATGGTGATATTGT+CGG | - | chr8_1:2438178-2438197 | Msa1172430:intron | 25.0% |
| ! | AATGCATGTATGCAAATTAA+AGG | - | chr8_1:2438203-2438222 | Msa1172430:intron | 25.0% |
| ! | TTATTGATGTTTGTGGTTAA+TGG | - | chr8_1:2438594-2438613 | Msa1172430:intron | 25.0% |
| !!! | TTGTATTTGTTGAGTTGATT+AGG | - | chr8_1:2438751-2438770 | Msa1172430:intron | 25.0% |
| ! | GATTAGGCTAAATGAAAATA+AGG | - | chr8_1:2438767-2438786 | Msa1172430:intron | 25.0% |
| !! | ATCCTTTCATTGATTGATAT+TGG | - | chr8_1:2438796-2438815 | Msa1172430:intron | 25.0% |
| ! | TACCAATATCAATCAATGAA+AGG | + | chr8_1:2438801-2438820 | None:intergenic | 25.0% |
| ! | AAACAAAACATAAGCATTCA+AGG | + | chr8_1:2438977-2438996 | None:intergenic | 25.0% |
| !!! | GGTTTTTAGAGTCTTATATT+AGG | - | chr8_1:2439145-2439164 | Msa1172430:intron | 25.0% |
| !! | CGTTAAAATTTTCTGTTGTA+TGG | - | chr8_1:2439480-2439499 | Msa1172430:intron | 25.0% |
| ! | ATTATATACTCAACAACATG+TGG | - | chr8_1:2439668-2439687 | Msa1172430:intron | 25.0% |
| ! | TACGAATTAACAGAAATATC+AGG | - | chr8_1:2439725-2439744 | Msa1172430:intron | 25.0% |
| ! | TTATGTCACTGTGTTAAATT+AGG | + | chr8_1:2439797-2439816 | None:intergenic | 25.0% |
| !! | TGCTATATCATTTCAGTTTT+TGG | - | chr8_1:2439956-2439975 | Msa1172430:intron | 25.0% |
| !!! | ATCATTTCAGTTTTTGGTTT+TGG | - | chr8_1:2439962-2439981 | Msa1172430:intron | 25.0% |
| !!! | GGTTTTGGATATTTTGTTTT+TGG | - | chr8_1:2439977-2439996 | Msa1172430:intron | 25.0% |
| ! | TTCACCCAATAATTTACAAT+TGG | - | chr8_1:2440018-2440037 | Msa1172430:intron | 25.0% |
| ! | AATTTACAATTGGTACAATG+TGG | - | chr8_1:2440028-2440047 | Msa1172430:intron | 25.0% |
| ! | ATTTACAATTGGTACAATGT+GGG | - | chr8_1:2440029-2440048 | Msa1172430:intron | 25.0% |
| ! | CAATACAGTATTACTATGTT+TGG | + | chr8_1:2440309-2440328 | None:intergenic | 25.0% |
| ! | TAGCCATATATACAGTATTA+CGG | - | chr8_1:2440431-2440450 | Msa1172430:intron | 25.0% |
| ! | CATATATAGACACAAAAATG+TGG | + | chr8_1:2440495-2440514 | None:intergenic | 25.0% |
| ! | AATCCAAAATCTGTTGAATA+TGG | + | chr8_1:2440520-2440539 | None:intergenic | 25.0% |
| ! | AAAGAGTTCTTTAAACAAAC+GGG | + | chr8_1:2440543-2440562 | None:intergenic | 25.0% |
| ! | AGGAGATTAAAAAATTTGAG+AGG | - | chr8_1:2440725-2440744 | Msa1172430:intron | 25.0% |
| TTCTTAGTTATTAACAGTGG+CGG | - | chr8_1:2435286-2435305 | Msa1172430:CDS | 30.0% | |
| !!! | TACAATTTTGTGTCGGTTTT+AGG | + | chr8_1:2435571-2435590 | None:intergenic | 30.0% |
| !!! | GATTTTTTAATTTTTCGGGG+TGG | - | chr8_1:2435622-2435641 | Msa1172430:intron | 30.0% |
| TGTAAATGGTTAATAACCAG+TGG | + | chr8_1:2435664-2435683 | None:intergenic | 30.0% | |
| ! | AATCATACATGACTTTAAGG+GGG | + | chr8_1:2435939-2435958 | None:intergenic | 30.0% |
| CAATCATACATGACTTTAAG+GGG | + | chr8_1:2435940-2435959 | None:intergenic | 30.0% | |
| GCAATCATACATGACTTTAA+GGG | + | chr8_1:2435941-2435960 | None:intergenic | 30.0% | |
| TAGGTGTAGATTAGGAAATA+GGG | + | chr8_1:2436024-2436043 | None:intergenic | 30.0% | |
| TTACAATGTAGGTGTAGATT+AGG | + | chr8_1:2436032-2436051 | None:intergenic | 30.0% | |
| AAATCAGACTGTTACAATGT+AGG | + | chr8_1:2436043-2436062 | None:intergenic | 30.0% | |
| TGTGCGTGATTATTTAACAT+TGG | - | chr8_1:2436108-2436127 | Msa1172430:intron | 30.0% | |
| ! | TTTAGGCAAAAAGGGAATTT+TGG | - | chr8_1:2436147-2436166 | Msa1172430:intron | 30.0% |
| CTAGCAACTTAGTAGAATAA+TGG | + | chr8_1:2436241-2436260 | None:intergenic | 30.0% | |
| ! | AAATGTTTCTACTCACCTAA+CGG | + | chr8_1:2436311-2436330 | None:intergenic | 30.0% |
| ! | AATGGTTTAGTAAATGGGTT+AGG | - | chr8_1:2436335-2436354 | Msa1172430:intron | 30.0% |
| TTAACCATTAACGCCTTAAT+GGG | + | chr8_1:2436361-2436380 | None:intergenic | 30.0% | |
| TATATAGACTCCTCACAATT+GGG | + | chr8_1:2436385-2436404 | None:intergenic | 30.0% | |
| TTATATAGACTCCTCACAAT+TGG | + | chr8_1:2436386-2436405 | None:intergenic | 30.0% | |
| ! | GCTAAATTGAAGTTTTTGCT+AGG | - | chr8_1:2436552-2436571 | Msa1172430:intron | 30.0% |
| GATTATTGTTCATTGAGGTA+AGG | - | chr8_1:2436574-2436593 | Msa1172430:intron | 30.0% | |
| TTATTGTTCATTGAGGTAAG+GGG | - | chr8_1:2436576-2436595 | Msa1172430:intron | 30.0% | |
| ! | ATGTTGTTGTTGAATTGTGA+TGG | - | chr8_1:2436887-2436906 | Msa1172430:intron | 30.0% |
| ATAATCTCATTCCATTGCTT+GGG | - | chr8_1:2436951-2436970 | Msa1172430:intron | 30.0% | |
| CTTAATTTATACCCAAGCAA+TGG | + | chr8_1:2436965-2436984 | None:intergenic | 30.0% | |
| GTTGTTGAATTGTGTTGAAT+TGG | - | chr8_1:2436995-2437014 | Msa1172430:intron | 30.0% | |
| TATTCGTCAAAAATGATCCA+AGG | + | chr8_1:2437144-2437163 | None:intergenic | 30.0% | |
| !! | TTGGATCATTTTTGACGAAT+AGG | - | chr8_1:2437143-2437162 | Msa1172430:intron | 30.0% |
| !! | TGGATCATTTTTGACGAATA+GGG | - | chr8_1:2437144-2437163 | Msa1172430:intron | 30.0% |
| ! | TGTTTTCACTCACTTTACTA+CGG | - | chr8_1:2437358-2437377 | Msa1172430:intron | 30.0% |
| AACAAAAAGGATTACAAGCT+TGG | - | chr8_1:2437484-2437503 | Msa1172430:intron | 30.0% | |
| TCTACAGTTCATATAGACTT+AGG | - | chr8_1:2437507-2437526 | Msa1172430:intron | 30.0% | |
| ! | AATGTTTGATAGTTCGTAAG+TGG | - | chr8_1:2437646-2437665 | Msa1172430:intron | 30.0% |
| CGAAAGATTTATATGGTACT+CGG | + | chr8_1:2437810-2437829 | None:intergenic | 30.0% | |
| ! | GTTGTATTTTCTCCCTTATT+TGG | - | chr8_1:2437904-2437923 | Msa1172430:intron | 30.0% |
| GATTTCTCACAATCCAAATA+AGG | + | chr8_1:2437920-2437939 | None:intergenic | 30.0% | |
| ! | TGCACACATTCTAATTTTGA+TGG | - | chr8_1:2438166-2438185 | Msa1172430:intron | 30.0% |
| GTGTGGTTGAATATATGTAT+TGG | - | chr8_1:2438262-2438281 | Msa1172430:intron | 30.0% | |
| TTATACACATTGGTGAGTTT+GGG | - | chr8_1:2438533-2438552 | Msa1172430:intron | 30.0% | |
| TGTGTACTTATTGATGTTTG+TGG | - | chr8_1:2438587-2438606 | Msa1172430:intron | 30.0% | |
| AGAAAGTCATCATCACTAAA+TGG | + | chr8_1:2438708-2438727 | None:intergenic | 30.0% | |
| TAGGCTAAATGAAAATAAGG+TGG | - | chr8_1:2438770-2438789 | Msa1172430:intron | 30.0% | |
| AGGCTAAATGAAAATAAGGT+GGG | - | chr8_1:2438771-2438790 | Msa1172430:intron | 30.0% | |
| ATAGCATGATGTGTATGAAA+TGG | - | chr8_1:2438884-2438903 | Msa1172430:intron | 30.0% | |
| TAGCATGATGTGTATGAAAT+GGG | - | chr8_1:2438885-2438904 | Msa1172430:intron | 30.0% | |
| TCATGTGATGTTAGTATTCT+AGG | - | chr8_1:2438917-2438936 | Msa1172430:intron | 30.0% | |
| ! | TCTTATATTAGGCTCTGATT+AGG | - | chr8_1:2439156-2439175 | Msa1172430:intron | 30.0% |
| ! | AATTTTCTGTTGTATGGGAA+TGG | - | chr8_1:2439486-2439505 | Msa1172430:intron | 30.0% |
| !!! | TTGTGTTGTTTCGTTCTTTT+AGG | - | chr8_1:2439532-2439551 | Msa1172430:intron | 30.0% |
| GTATATAAACGACTTGAATG+CGG | - | chr8_1:2439883-2439902 | Msa1172430:intron | 30.0% | |
| TGAATGAATTGTGATATCAG+TGG | - | chr8_1:2440082-2440101 | Msa1172430:intron | 30.0% | |
| AAATACAATGTCGTACAATG+TGG | - | chr8_1:2440204-2440223 | Msa1172430:intron | 30.0% | |
| AATACAATGTCGTACAATGT+GGG | - | chr8_1:2440205-2440224 | Msa1172430:intron | 30.0% | |
| TTTGAGAGGATTACAAATCA+TGG | - | chr8_1:2440739-2440758 | Msa1172430:intron | 30.0% | |
| GAAACATCTAAGTCTGTCTT+TGG | + | chr8_1:2435260-2435279 | None:intergenic | 35.0% | |
| GGAGCCAAAAAAAAAGGTTT+GGG | - | chr8_1:2435307-2435326 | Msa1172430:CDS | 35.0% | |
| !!! | TCCACCCAAACCTTTTTTTT+TGG | + | chr8_1:2435314-2435333 | None:intergenic | 35.0% |
| !!! | TTTGTGTCGGTTTTAGGTTT+CGG | + | chr8_1:2435565-2435584 | None:intergenic | 35.0% |
| AAATGGTTAATAACCAGTGG+CGG | + | chr8_1:2435661-2435680 | None:intergenic | 35.0% | |
| AGGGGGAAATAAATTATCCA+AGG | + | chr8_1:2435922-2435941 | None:intergenic | 35.0% | |
| GGCAATCATACATGACTTTA+AGG | + | chr8_1:2435942-2435961 | None:intergenic | 35.0% | |
| AAGTCATGTATGATTGCCAA+TGG | - | chr8_1:2435944-2435963 | Msa1172430:intron | 35.0% | |
| ATTAGGAAATAGGGTATGGA+GGG | + | chr8_1:2436015-2436034 | None:intergenic | 35.0% | |
| GTAGATTAGGAAATAGGGTA+TGG | + | chr8_1:2436019-2436038 | None:intergenic | 35.0% | |
| GTAGGTGTAGATTAGGAAAT+AGG | + | chr8_1:2436025-2436044 | None:intergenic | 35.0% | |
| TGTAGTAATTAGTTGTGAGC+CGG | - | chr8_1:2436261-2436280 | Msa1172430:intron | 35.0% | |
| CTTAACCATTAACGCCTTAA+TGG | + | chr8_1:2436362-2436381 | None:intergenic | 35.0% | |
| CTAGAATCTATAACACCTCT+TGG | + | chr8_1:2436530-2436549 | None:intergenic | 35.0% | |
| !! | CAAGAGGTGTTATAGATTCT+AGG | - | chr8_1:2436528-2436547 | Msa1172430:intron | 35.0% |
| GCTAGGATTATTGTTCATTG+AGG | - | chr8_1:2436569-2436588 | Msa1172430:intron | 35.0% | |
| TATTGTTCATTGAGGTAAGG+GGG | - | chr8_1:2436577-2436596 | Msa1172430:intron | 35.0% | |
| AACATGAGCACGAATTTCAA+CGG | + | chr8_1:2436693-2436712 | None:intergenic | 35.0% | |
| GATAATCTCATTCCATTGCT+TGG | - | chr8_1:2436950-2436969 | Msa1172430:intron | 35.0% | |
| !! | GGATCATTTTTGACGAATAG+GGG | - | chr8_1:2437145-2437164 | Msa1172430:intron | 35.0% |
| ! | GTTTTCACTCACTTTACTAC+GGG | - | chr8_1:2437359-2437378 | Msa1172430:intron | 35.0% |
| CTTTACTACGGGAACATAAT+TGG | - | chr8_1:2437370-2437389 | Msa1172430:intron | 35.0% | |
| ATGAACTCATGCGAACAAAA+AGG | - | chr8_1:2437471-2437490 | Msa1172430:intron | 35.0% | |
| AGTTCATATAGACTTAGGCA+AGG | - | chr8_1:2437512-2437531 | Msa1172430:intron | 35.0% | |
| !!! | TTGATTTTCGGGTGAAAATG+TGG | - | chr8_1:2437572-2437591 | Msa1172430:intron | 35.0% |
| AACACAACTCTACATGGATA+CGG | + | chr8_1:2438438-2438457 | None:intergenic | 35.0% | |
| TATCCATGTAGAGTTGTGTT+TGG | - | chr8_1:2438438-2438457 | Msa1172430:intron | 35.0% | |
| ATCCATGTAGAGTTGTGTTT+GGG | - | chr8_1:2438439-2438458 | Msa1172430:intron | 35.0% | |
| ATGCGTCATATTTGATTGTG+TGG | - | chr8_1:2438492-2438511 | Msa1172430:intron | 35.0% | |
| GTCATATTTGATTGTGTGGT+GGG | - | chr8_1:2438496-2438515 | Msa1172430:intron | 35.0% | |
| ! | CTTTGGTGACTTATACACAT+TGG | - | chr8_1:2438523-2438542 | Msa1172430:intron | 35.0% |
| CTTATACACATTGGTGAGTT+TGG | - | chr8_1:2438532-2438551 | Msa1172430:intron | 35.0% | |
| TATACACATTGGTGAGTTTG+GGG | - | chr8_1:2438534-2438553 | Msa1172430:intron | 35.0% | |
| AGTTTGGGGAATTGTACATT+TGG | - | chr8_1:2438548-2438567 | Msa1172430:intron | 35.0% | |
| CTATGTCGATGACTTAACTA+GGG | - | chr8_1:2438831-2438850 | Msa1172430:intron | 35.0% | |
| AGCATGATGTGTATGAAATG+GGG | - | chr8_1:2438886-2438905 | Msa1172430:intron | 35.0% | |
| TGTGATGTTAGTATTCTAGG+AGG | - | chr8_1:2438920-2438939 | Msa1172430:intron | 35.0% | |
| ! | GTGATGTTAGTATTCTAGGA+GGG | - | chr8_1:2438921-2438940 | Msa1172430:intron | 35.0% |
| !! | TGAGTTGATTGATGATTGCT+TGG | - | chr8_1:2439097-2439116 | Msa1172430:intron | 35.0% |
| ! | ATTGATGATTGCTTGGATAG+CGG | - | chr8_1:2439104-2439123 | Msa1172430:intron | 35.0% |
| CGGGAGATAATATCTGTTAT+CGG | - | chr8_1:2439124-2439143 | Msa1172430:intron | 35.0% | |
| ! | TGGAGATTTTGCTCATATGT+CGG | - | chr8_1:2439215-2439234 | Msa1172430:intron | 35.0% |
| ! | GAATGGTATTGAGTTACCTT+CGG | - | chr8_1:2439503-2439522 | Msa1172430:intron | 35.0% |
| !! | GTTGTTTCGTTCTTTTAGGT+CGG | - | chr8_1:2439536-2439555 | Msa1172430:intron | 35.0% |
| TCTATGCATGAGATCTTTGT+GGG | + | chr8_1:2439640-2439659 | None:intergenic | 35.0% | |
| TTCTATGCATGAGATCTTTG+TGG | + | chr8_1:2439641-2439660 | None:intergenic | 35.0% | |
| TCACTGTGTTAAATTAGGTC+GGG | + | chr8_1:2439792-2439811 | None:intergenic | 35.0% | |
| GTCACTGTGTTAAATTAGGT+CGG | + | chr8_1:2439793-2439812 | None:intergenic | 35.0% | |
| !! | GATGATTTTGTTATCGGACA+TGG | - | chr8_1:2439817-2439836 | Msa1172430:intron | 35.0% |
| TGATATCAGTGGTACAATGT+GGG | - | chr8_1:2440093-2440112 | Msa1172430:intron | 35.0% | |
| GATCGTTTGTTTACCCAATT+CGG | - | chr8_1:2440328-2440347 | Msa1172430:intron | 35.0% | |
| GGACCGTAATACTGTATATA+TGG | + | chr8_1:2440437-2440456 | None:intergenic | 35.0% | |
| ! | GAGCCATATTCAACAGATTT+TGG | - | chr8_1:2440514-2440533 | Msa1172430:intron | 35.0% |
| TGAAATTAGTGAAGTCACTG+AGG | - | chr8_1:2440630-2440649 | Msa1172430:intron | 35.0% | |
| TTAGCATCTTCACTAAAAGC+AGG | + | chr8_1:2440658-2440677 | None:intergenic | 35.0% | |
| GATGCTAAGTCTTTCTTACA+AGG | - | chr8_1:2440670-2440689 | Msa1172430:intron | 35.0% | |
| ! | CAAGGTTTGATTGATGACTT+TGG | - | chr8_1:2440688-2440707 | Msa1172430:intron | 35.0% |
| CTTTGGTGAAGATGATGTTA+AGG | - | chr8_1:2440705-2440724 | Msa1172430:intron | 35.0% | |
| ACATCTAAGTCTGTCTTTGG+AGG | + | chr8_1:2435257-2435276 | None:intergenic | 40.0% | |
| CGGAGCCAAAAAAAAAGGTT+TGG | - | chr8_1:2435306-2435325 | Msa1172430:CDS | 40.0% | |
| GCCAAAAAAAAAGGTTTGGG+TGG | - | chr8_1:2435310-2435329 | Msa1172430:CDS | 40.0% | |
| ACATTAGGCAACAATGCCAT+TGG | + | chr8_1:2435963-2435982 | None:intergenic | 40.0% | |
| TTGTTGCCTAATGTCACAAG+AGG | - | chr8_1:2435969-2435988 | Msa1172430:intron | 40.0% | |
| TGTTGCCTAATGTCACAAGA+GGG | - | chr8_1:2435970-2435989 | Msa1172430:intron | 40.0% | |
| GATTAGGAAATAGGGTATGG+AGG | + | chr8_1:2436016-2436035 | None:intergenic | 40.0% | |
| !! | TAAATGGGTTAGGCCCATTA+AGG | - | chr8_1:2436345-2436364 | Msa1172430:intron | 40.0% |
| AATGGTTAAGCCCAATTGTG+AGG | - | chr8_1:2436372-2436391 | Msa1172430:intron | 40.0% | |
| GTTCAAGAGAAGGAGCAAAA+GGG | - | chr8_1:2436480-2436499 | Msa1172430:intron | 40.0% | |
| AAGGAGCAAAAGGGTTAGAA+GGG | - | chr8_1:2436489-2436508 | Msa1172430:intron | 40.0% | |
| AGAAAGCTTGAAGAACCAAG+AGG | - | chr8_1:2436512-2436531 | Msa1172430:intron | 40.0% | |
| TATTCGATGTGTTAGAGCCT+CGG | - | chr8_1:2437112-2437131 | Msa1172430:intron | 40.0% | |
| ! | GGGTTTTCTCATACGAACTT+AGG | - | chr8_1:2437609-2437628 | Msa1172430:intron | 40.0% |
| GATACGGATTTCGTCGAAAA+TGG | - | chr8_1:2437774-2437793 | Msa1172430:intron | 40.0% | |
| CACACATTCACAAACACCAT+TGG | + | chr8_1:2438247-2438266 | None:intergenic | 40.0% | |
| CAATGGTGTTTGTGAATGTG+TGG | - | chr8_1:2438245-2438264 | Msa1172430:intron | 40.0% | |
| GAAGACTTTGTCGTAGTTGA+TGG | - | chr8_1:2438410-2438429 | Msa1172430:intron | 40.0% | |
| TTGGGCGCATTACATACATT+TGG | - | chr8_1:2438457-2438476 | Msa1172430:intron | 40.0% | |
| CGTCATATTTGATTGTGTGG+TGG | - | chr8_1:2438495-2438514 | Msa1172430:intron | 40.0% | |
| CCTAGTTAAGTCATCGACAT+AGG | + | chr8_1:2438833-2438852 | None:intergenic | 40.0% | |
| CCTATGTCGATGACTTAACT+AGG | - | chr8_1:2438830-2438849 | Msa1172430:intron | 40.0% | |
| GCATGATGTGTATGAAATGG+GGG | - | chr8_1:2438887-2438906 | Msa1172430:intron | 40.0% | |
| ! | TGTTAGTATTCTAGGAGGGA+TGG | - | chr8_1:2438925-2438944 | Msa1172430:intron | 40.0% |
| ! | GTTAGTATTCTAGGAGGGAT+GGG | - | chr8_1:2438926-2438945 | Msa1172430:intron | 40.0% |
| CATTCATACAAACAGGTAGG+CGG | + | chr8_1:2439044-2439063 | None:intergenic | 40.0% | |
| GCCTACCTGTTTGTATGAAT+GGG | - | chr8_1:2439043-2439062 | Msa1172430:intron | 40.0% | |
| ACCCATTCATACAAACAGGT+AGG | + | chr8_1:2439047-2439066 | None:intergenic | 40.0% | |
| GTCTACCCATTCATACAAAC+AGG | + | chr8_1:2439051-2439070 | None:intergenic | 40.0% | |
| !!! | GTGCAGGATTAGTTTGCTTT+TGG | - | chr8_1:2439074-2439093 | Msa1172430:intron | 40.0% |
| ! | TTGATGATTGCTTGGATAGC+GGG | - | chr8_1:2439105-2439124 | Msa1172430:intron | 40.0% |
| ! | GGAGATTTTGCTCATATGTC+GGG | - | chr8_1:2439216-2439235 | Msa1172430:intron | 40.0% |
| ! | TTTGCTCATATGTCGGGTTT+TGG | - | chr8_1:2439222-2439241 | Msa1172430:intron | 40.0% |
| ! | AGAAATAGGGCGTTACAAGT+TGG | - | chr8_1:2439420-2439439 | Msa1172430:intron | 40.0% |
| !! | AACAACACAACAAGTACCGA+AGG | + | chr8_1:2439522-2439541 | None:intergenic | 40.0% |
| TTGCATTGCAGGTGAAAGAT+TGG | - | chr8_1:2439756-2439775 | Msa1172430:intron | 40.0% | |
| ATAGAGAGACTTTGCTCGTT+GGG | - | chr8_1:2439844-2439863 | Msa1172430:intron | 40.0% | |
| !! | GTCAACCCAGTTTAAGTTGT+GGG | + | chr8_1:2439918-2439937 | None:intergenic | 40.0% |
| !! | TGTCAACCCAGTTTAAGTTG+TGG | + | chr8_1:2439919-2439938 | None:intergenic | 40.0% |
| GTGATATCAGTGGTACAATG+TGG | - | chr8_1:2440092-2440111 | Msa1172430:intron | 40.0% | |
| TAGGCACAATTGACCGAATT+GGG | + | chr8_1:2440344-2440363 | None:intergenic | 40.0% | |
| TAGATACTCTATAGTCGCAG+AGG | + | chr8_1:2440367-2440386 | None:intergenic | 40.0% | |
| TAGACACAAAAATGTGGCGA+GGG | + | chr8_1:2440489-2440508 | None:intergenic | 40.0% | |
| ATAGACACAAAAATGTGGCG+AGG | + | chr8_1:2440490-2440509 | None:intergenic | 40.0% | |
| ! | AGTGGCGGAGCCAAAAAAAA+AGG | - | chr8_1:2435301-2435320 | Msa1172430:CDS | 45.0% |
| ATTCCCGCAAAGTGGTGTAA+TGG | + | chr8_1:2435419-2435438 | None:intergenic | 45.0% | |
| TACACCACTTTGCGGGAATT+TGG | - | chr8_1:2435420-2435439 | Msa1172430:intron | 45.0% | |
| TGATCCAAATTCCCGCAAAG+TGG | + | chr8_1:2435427-2435446 | None:intergenic | 45.0% | |
| ! | TACGCTACTTTGCGGGAATT+TGG | - | chr8_1:2435534-2435553 | Msa1172430:intron | 45.0% |
| CTCATCCCTCTTGTGACATT+AGG | + | chr8_1:2435978-2435997 | None:intergenic | 45.0% | |
| AATGTCACAAGAGGGATGAG+AGG | - | chr8_1:2435978-2435997 | Msa1172430:intron | 45.0% | |
| ! | TAGGCCCATTAAGGCGTTAA+TGG | - | chr8_1:2436354-2436373 | Msa1172430:intron | 45.0% |
| GGTTCAAGAGAAGGAGCAAA+AGG | - | chr8_1:2436479-2436498 | Msa1172430:intron | 45.0% | |
| GAAGGAGCAAAAGGGTTAGA+AGG | - | chr8_1:2436488-2436507 | Msa1172430:intron | 45.0% | |
| AGGTAAGGGGGTAAGATTTC+AGG | - | chr8_1:2436589-2436608 | Msa1172430:intron | 45.0% | |
| GAGCACGAATTTCAACGGTT+GGG | + | chr8_1:2436688-2436707 | None:intergenic | 45.0% | |
| TGAGCACGAATTTCAACGGT+TGG | + | chr8_1:2436689-2436708 | None:intergenic | 45.0% | |
| ATTCGATGTGTTAGAGCCTC+GGG | - | chr8_1:2437113-2437132 | Msa1172430:intron | 45.0% | |
| ! | ATGCTTGTTGCTCCGTGTTT+GGG | - | chr8_1:2437279-2437298 | Msa1172430:intron | 45.0% |
| ACACCTTCAAACAGTCGCAA+CGG | + | chr8_1:2437330-2437349 | None:intergenic | 45.0% | |
| AGACTTAGGCAAGGCATGTA+AGG | - | chr8_1:2437521-2437540 | Msa1172430:intron | 45.0% | |
| TTAGGCAAGGCATGTAAGGA+TGG | - | chr8_1:2437525-2437544 | Msa1172430:intron | 45.0% | |
| !! | GTCGGTTTTGCCACTTGATA+CGG | - | chr8_1:2437758-2437777 | Msa1172430:intron | 45.0% |
| TCGACGAAATCCGTATCAAG+TGG | + | chr8_1:2437771-2437790 | None:intergenic | 45.0% | |
| !! | ATTGTGTGGTGGGTGAACTT+TGG | - | chr8_1:2438506-2438525 | Msa1172430:intron | 45.0% |
| CGCCTACCTGTTTGTATGAA+TGG | - | chr8_1:2439042-2439061 | Msa1172430:intron | 45.0% | |
| AGTTTGGACAAGACTGACCA+CGG | + | chr8_1:2439454-2439473 | None:intergenic | 45.0% | |
| !! | AGGTTTTGTCGTTGCATTGC+AGG | - | chr8_1:2439745-2439764 | Msa1172430:intron | 45.0% |
| CAGGTGAAAGATTGGTACAG+TGG | - | chr8_1:2439764-2439783 | Msa1172430:intron | 45.0% | |
| CATAGAGAGACTTTGCTCGT+TGG | - | chr8_1:2439843-2439862 | Msa1172430:intron | 45.0% | |
| CTCGTTGGGATAGAATGAGA+CGG | - | chr8_1:2439858-2439877 | Msa1172430:intron | 45.0% | |
| TTCGTGCCCACAACTTAAAC+TGG | - | chr8_1:2439909-2439928 | Msa1172430:intron | 45.0% | |
| TCGTGCCCACAACTTAAACT+GGG | - | chr8_1:2439910-2439929 | Msa1172430:intron | 45.0% | |
| GTAGGCACAATTGACCGAAT+TGG | + | chr8_1:2440345-2440364 | None:intergenic | 45.0% | |
| TACTCTATAGTCGCAGAGGT+AGG | + | chr8_1:2440363-2440382 | None:intergenic | 45.0% | |
| TCAGGGACATTGTTCTAGTC+TGG | + | chr8_1:2440458-2440477 | None:intergenic | 45.0% | |
| TGGCGAGGGATATTGTTTCA+GGG | + | chr8_1:2440475-2440494 | None:intergenic | 45.0% | |
| !! | AATTTAAATAATTCAATTAT+AGG | + | chr8_1:2435385-2435404 | None:intergenic | 5.0% |
| !!! | ATTGAATTATTTAAATTTTT+CGG | - | chr8_1:2435388-2435407 | Msa1172430:intron | 5.0% |
| !! | AATTTAAATAATTCAATTAT+AGG | + | chr8_1:2435385-2435404 | None:intergenic | 5.0% |
| !! | TATATAAATTAATTTCAATT+AGG | + | chr8_1:2435700-2435719 | None:intergenic | 5.0% |
| TGGGCCATTACACCACTTTG+CGG | - | chr8_1:2435412-2435431 | Msa1172430:intron | 50.0% | |
| ATTCCCGCAAAGTAGCGTAG+TGG | + | chr8_1:2435533-2435552 | None:intergenic | 50.0% | |
| TAGGGTATGGAGGGCTAGAA+TGG | + | chr8_1:2436006-2436025 | None:intergenic | 50.0% | |
| TGAGAGAGGTAGAGAGAGAG+AGG | - | chr8_1:2436457-2436476 | Msa1172430:intron | 50.0% | |
| GAGAGAGGTAGAGAGAGAGA+GGG | - | chr8_1:2436458-2436477 | Msa1172430:intron | 50.0% | |
| GAGAGAGAGGGTTCAAGAGA+AGG | - | chr8_1:2436470-2436489 | Msa1172430:intron | 50.0% | |
| ! | CATGCTTGTTGCTCCGTGTT+TGG | - | chr8_1:2437278-2437297 | Msa1172430:intron | 50.0% |
| CGCCCAAACACAACTCTACA+TGG | + | chr8_1:2438444-2438463 | None:intergenic | 50.0% | |
| GATGTGAAGCTAACCCTCAG+TGG | - | chr8_1:2439012-2439031 | Msa1172430:intron | 50.0% | |
| TAGGCGGTCAAAACCACTGA+GGG | + | chr8_1:2439028-2439047 | None:intergenic | 50.0% | |
| TGAATGGGTAGACGAAGTGC+AGG | - | chr8_1:2439058-2439077 | Msa1172430:intron | 50.0% | |
| !! | ACAAGTTGGTATCAGAGCCG+TGG | - | chr8_1:2439434-2439453 | Msa1172430:intron | 50.0% |
| !! | TTAGGTCGGTTTGAGCGTAG+TGG | - | chr8_1:2439550-2439569 | Msa1172430:intron | 50.0% |
| !! | TAGGTCGGTTTGAGCGTAGT+GGG | - | chr8_1:2439551-2439570 | Msa1172430:intron | 50.0% |
| GTGGCGAGGGATATTGTTTC+AGG | + | chr8_1:2440476-2440495 | None:intergenic | 50.0% | |
| GGGCCATTACACCACTTTGC+GGG | - | chr8_1:2435413-2435432 | Msa1172430:intron | 55.0% | |
| ! | TGGGCCACTACGCTACTTTG+CGG | - | chr8_1:2435526-2435545 | Msa1172430:intron | 55.0% |
| !!! | TTTTTCGGGGTGGGCCATGA+AGG | - | chr8_1:2435632-2435651 | Msa1172430:intron | 55.0% |
| !! | TTTTCGGGGTGGGCCATGAA+GGG | - | chr8_1:2435633-2435652 | Msa1172430:intron | 55.0% |
| ATGATCCAAGGCACAACCCG+AGG | + | chr8_1:2437132-2437151 | None:intergenic | 55.0% | |
| ! | ATTTTGCAGCGTTGCGCCTG+AGG | - | chr8_1:2437176-2437195 | Msa1172430:intron | 55.0% |
| !! | AACGCTGGCTCTCTGTGAGT+GGG | + | chr8_1:2437217-2437236 | None:intergenic | 55.0% |
| ACTCACAGAGAGCCAGCGTT+GGG | - | chr8_1:2437217-2437236 | Msa1172430:intron | 55.0% | |
| TTGCTCCGTGTTTGGGTGCT+TGG | - | chr8_1:2437286-2437305 | Msa1172430:intron | 55.0% | |
| TGCTCCGTGTTTGGGTGCTT+GGG | - | chr8_1:2437287-2437306 | Msa1172430:intron | 55.0% | |
| TGCTTGGGGGCAGTCGTATA+GGG | - | chr8_1:2437302-2437321 | Msa1172430:intron | 55.0% | |
| GGTCCGTTGCGACTGTTTGA+AGG | - | chr8_1:2437324-2437343 | Msa1172430:intron | 55.0% | |
| GTAGGCGGTCAAAACCACTG+AGG | + | chr8_1:2439029-2439048 | None:intergenic | 55.0% | |
| !! | AGGTCGGTTTGAGCGTAGTG+GGG | - | chr8_1:2439552-2439571 | Msa1172430:intron | 55.0% |
| ! | GGGCCACTACGCTACTTTGC+GGG | - | chr8_1:2435527-2435546 | Msa1172430:intron | 60.0% |
| ! | TAGAGCCTCGGGTTGTGCCT+TGG | - | chr8_1:2437124-2437143 | Msa1172430:intron | 60.0% |
| !! | CAACGCTGGCTCTCTGTGAG+TGG | + | chr8_1:2437218-2437237 | None:intergenic | 60.0% |
| CACTCACAGAGAGCCAGCGT+TGG | - | chr8_1:2437216-2437235 | Msa1172430:intron | 60.0% | |
| ! | AGGAGTATAGCGCCCAACGC+TGG | + | chr8_1:2437232-2437251 | None:intergenic | 60.0% |
| ! | AGCGTTGGGCGCTATACTCC+TGG | - | chr8_1:2437231-2437250 | Msa1172430:intron | 60.0% |
| GCTCCGTGTTTGGGTGCTTG+GGG | - | chr8_1:2437288-2437307 | Msa1172430:intron | 60.0% | |
| CTCCGTGTTTGGGTGCTTGG+GGG | - | chr8_1:2437289-2437308 | Msa1172430:intron | 60.0% | |
| TGCCCCCAAGCACCCAAACA+CGG | + | chr8_1:2437294-2437313 | None:intergenic | 60.0% | |
| GTGCTTGGGGGCAGTCGTAT+AGG | - | chr8_1:2437301-2437320 | Msa1172430:intron | 60.0% | |
| GCTTGGGGGCAGTCGTATAG+GGG | - | chr8_1:2437303-2437322 | Msa1172430:intron | 60.0% | |
| !! | GGTCGGTTTGAGCGTAGTGG+GGG | - | chr8_1:2439553-2439572 | Msa1172430:intron | 60.0% |
| ! | ACCAGTGGCGGAGCCCTTCA+TGG | + | chr8_1:2435649-2435668 | None:intergenic | 65.0% |
| TGCAGCGTTGCGCCTGAGGT+AGG | - | chr8_1:2437180-2437199 | Msa1172430:intron | 65.0% | |
| GCAGCGTTGCGCCTGAGGTA+GGG | - | chr8_1:2437181-2437200 | Msa1172430:intron | 65.0% | |
| CAGCGTTGCGCCTGAGGTAG+GGG | - | chr8_1:2437182-2437201 | Msa1172430:intron | 65.0% | |
| GCCATGAAGGGCTCCGCCAC+TGG | - | chr8_1:2435645-2435664 | Msa1172430:intron | 70.0% | |
| !! | GCGCCTGAGGTAGGGGTGCT+AGG | - | chr8_1:2437189-2437208 | Msa1172430:intron | 70.0% |
| GCGCCTAGCACCCCTACCTC+AGG | + | chr8_1:2437195-2437214 | None:intergenic | 70.0% | |
| GGCGCTATACTCCTGGCGCC+AGG | - | chr8_1:2437238-2437257 | Msa1172430:intron | 70.0% | |
| ! | GTTGCCCTGTCCAGAGCGCC+TGG | + | chr8_1:2437259-2437278 | None:intergenic | 70.0% |
| ACTCCTGGCGCCAGGCGCTC+TGG | - | chr8_1:2437246-2437265 | Msa1172430:intron | 75.0% | |
| ! | TGTCCAGAGCGCCTGGCGCC+AGG | + | chr8_1:2437252-2437271 | None:intergenic | 75.0% |
| ! | TGGCGCCAGGCGCTCTGGAC+AGG | - | chr8_1:2437251-2437270 | Msa1172430:intron | 75.0% |
| ! | GGCGCCAGGCGCTCTGGACA+GGG | - | chr8_1:2437252-2437271 | Msa1172430:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 2435198 | 2440792 | 2435198 | ID=Msa1172430;Name=Msa1172430 |
| chr8_1 | mRNA | 2435198 | 2440792 | 2435198 | ID=Msa1172430-mRNA-1;Parent=Msa1172430;Name=Msa1172430-mRNA-1;_AED=0.50;_eAED=0.50;_QI=0|0|0|0.33|1|1|3|0|66 |
| chr8_1 | exon | 2440787 | 2440792 | 2440787 | ID=Msa1172430-mRNA-1:exon:949;Parent=Msa1172430-mRNA-1 |
| chr8_1 | exon | 2436244 | 2436252 | 2436244 | ID=Msa1172430-mRNA-1:exon:948;Parent=Msa1172430-mRNA-1 |
| chr8_1 | exon | 2435198 | 2435383 | 2435198 | ID=Msa1172430-mRNA-1:exon:947;Parent=Msa1172430-mRNA-1 |
| chr8_1 | CDS | 2440787 | 2440792 | 2440787 | ID=Msa1172430-mRNA-1:cds;Parent=Msa1172430-mRNA-1 |
| chr8_1 | CDS | 2436244 | 2436252 | 2436244 | ID=Msa1172430-mRNA-1:cds;Parent=Msa1172430-mRNA-1 |
| chr8_1 | CDS | 2435198 | 2435383 | 2435198 | ID=Msa1172430-mRNA-1:cds;Parent=Msa1172430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
