AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1173780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1173780 MtrunA17_Chr8g0349361 88.072 503 25 2 1 469 1 502 0.0 918
Msa1173780 MtrunA17_Chr8g0349361 78.603 458 91 3 513 965 60 515 0.0 757
Msa1173780 MtrunA17_Chr8g0349371 95.806 453 19 0 513 965 46 498 0.0 916
Msa1173780 MtrunA17_Chr8g0349371 69.400 500 100 7 6 469 3 485 0.0 699
Msa1173780 MtrunA17_Chr5g0397701 64.548 409 136 3 554 960 99 500 0.0 572
Msa1173780 MtrunA17_Chr5g0397701 49.012 506 186 10 20 473 6 491 2.66e-161 483
Msa1173780 MtrunA17_Chr6g0471441 58.559 444 170 6 526 962 69 505 0.0 550
Msa1173780 MtrunA17_Chr6g0471441 52.889 450 171 5 59 469 48 495 2.70e-165 493
Msa1173780 MtrunA17_Chr8g0349241 56.250 432 184 5 522 951 60 488 1.54e-175 519
Msa1173780 MtrunA17_Chr8g0349241 53.318 437 165 5 68 467 53 487 5.29e-166 494
Msa1173780 MtrunA17_Chr7g0247251 57.333 375 157 3 558 931 24 396 7.55e-158 470
Msa1173780 MtrunA17_Chr7g0247251 49.873 395 156 4 95 448 3 396 1.49e-139 422
Msa1173780 MtrunA17_Chr7g0247261 52.415 414 185 6 525 931 35 443 1.54e-156 468
Msa1173780 MtrunA17_Chr7g0247261 49.034 414 166 6 76 448 34 443 9.89e-143 433
Msa1173780 MtrunA17_Chr3g0104841 45.528 369 191 6 562 929 106 465 1.37e-111 352
Msa1173780 MtrunA17_Chr3g0104841 44.565 368 164 5 113 446 104 465 2.40e-103 330
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1173780 AT2G45830.4 64.815 432 145 4 533 959 86 515 0.0 594
Msa1173780 AT2G45830.4 57.676 482 152 8 27 467 36 506 0.0 553
Msa1173780 AT2G45830.1 64.815 432 145 4 533 959 86 515 0.0 594
Msa1173780 AT2G45830.1 57.676 482 152 8 27 467 36 506 0.0 553
Msa1173780 AT3G61270.1 63.700 427 152 3 535 960 69 493 0.0 577
Msa1173780 AT3G61270.1 55.328 488 171 5 18 469 9 485 0.0 534
Msa1173780 AT5G23850.1 59.417 446 163 7 529 963 101 539 0.0 563
Msa1173780 AT5G23850.1 57.477 428 131 6 81 463 101 522 1.41e-171 511
Msa1173780 AT2G45830.3 68.351 376 116 3 585 959 1 374 0.0 546
Msa1173780 AT2G45830.3 65.205 365 92 2 138 467 1 365 8.45e-169 498
Msa1173780 AT2G45830.6 68.351 376 116 3 585 959 1 374 0.0 546
Msa1173780 AT2G45830.6 65.205 365 92 2 138 467 1 365 8.45e-169 498
Msa1173780 AT2G45830.2 68.351 376 116 3 585 959 1 374 0.0 546
Msa1173780 AT2G45830.2 65.205 365 92 2 138 467 1 365 8.45e-169 498
Msa1173780 AT2G45830.5 68.351 376 116 3 585 959 1 374 0.0 546
Msa1173780 AT2G45830.5 65.205 365 92 2 138 467 1 365 8.45e-169 498
Msa1173780 AT3G61270.2 66.223 376 125 2 585 960 1 374 5.42e-180 526
Msa1173780 AT3G61270.2 63.388 366 100 1 138 469 1 366 2.69e-162 481
Msa1173780 AT3G48980.2 56.177 429 177 5 544 963 116 542 1.36e-179 532
Msa1173780 AT3G48980.2 55.093 432 151 4 76 464 95 526 6.05e-168 502
Msa1173780 AT3G48980.1 56.177 429 177 5 544 963 110 536 2.07e-179 531
Msa1173780 AT3G48980.1 54.839 434 153 4 76 466 89 522 8.38e-168 501
Msa1173780 AT1G63420.1 59.390 426 162 5 544 959 151 575 2.70e-176 525
Msa1173780 AT1G63420.1 52.278 417 154 5 96 467 150 566 2.42e-144 442
Msa1173780 AT3G61280.1 53.066 424 196 1 542 962 111 534 8.19e-162 486
Msa1173780 AT3G61280.1 45.491 499 219 6 22 467 24 522 2.13e-144 441
Msa1173780 AT2G45840.1 50.317 473 222 6 497 963 54 519 1.34e-160 482
Msa1173780 AT2G45840.1 47.653 426 178 5 82 467 86 506 6.41e-134 413
Msa1173780 AT3G61290.1 52.817 426 197 2 542 963 24 449 3.47e-157 471
Msa1173780 AT3G61290.1 48.941 425 172 5 83 467 17 436 6.26e-135 413
Msa1173780 AT1G63420.2 61.889 307 111 3 544 844 151 457 8.83e-130 400
Msa1173780 AT1G63420.2 60.714 308 115 3 96 397 150 457 1.13e-128 397
Msa1173780 AT1G07220.1 46.701 394 199 7 562 954 115 498 1.67e-122 382
Msa1173780 AT1G07220.1 39.270 466 209 11 40 445 22 473 9.60e-109 346
Msa1173780 AT3G61280.2 47.112 329 157 4 22 333 24 352 1.78e-94 304
Msa1173780 AT3G61280.2 54.959 242 106 1 542 780 111 352 1.01e-88 288

Find 235 sgRNAs with CRISPR-Local

Find 781 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTCATTTATGACTTTA+AGG 0.040113 8_1:+4368681 None:intergenic
CAATAATGCAGGTAGAAATT+TGG 0.165888 8_1:-4367302 Msa1173780:CDS
ATAGAGTACCTTATGCTTAT+TGG 0.187130 8_1:-4368637 Msa1173780:CDS
TTTACTATTTAGATAGTATT+TGG 0.193374 8_1:+4367059 None:intergenic
TATTGTAACTTTAGCCTTCT+TGG 0.194591 8_1:+4379229 None:intergenic
AAACATATCTTAAACTCTTC+TGG 0.202488 8_1:-4379286 Msa1173780:CDS
TACAACACTATTGGCCAATT+AGG 0.204788 8_1:-4376237 Msa1173780:CDS
CTAAAACCATGGAGAGAAAA+AGG 0.213324 8_1:-4370918 Msa1173780:CDS
TTAAAACCATGGAGAGAAAA+AGG 0.219883 8_1:-4378068 Msa1173780:CDS
AAAAGTTCATGTAAAGTTAA+AGG 0.231019 8_1:+4375562 None:intergenic
CATTTACTATTATCCCTAAT+TGG 0.236014 8_1:+4376223 None:intergenic
TCTTTCCAGATTGGTCCTTT+TGG 0.237147 8_1:-4370602 Msa1173780:CDS
TGTTCCCAGATTGGTCCTTT+TGG 0.251598 8_1:-4377752 Msa1173780:CDS
CCCTGGCAAGTTACCTGATT+TGG 0.253051 8_1:-4370742 Msa1173780:CDS
GAAAATCTTGAAGGCTAGTT+TGG 0.275454 8_1:-4374888 Msa1173780:intron
TGGTTCCCTTACAACATTAT+TGG 0.275707 8_1:-4367849 Msa1173780:CDS
TATGATTGCCCAAAGGATTA+AGG 0.282318 8_1:-4374780 Msa1173780:CDS
ATTTAAGAAGAAAATCTTCT+TGG 0.282497 8_1:+4371057 None:intergenic
TCTTAAATTTGCTGTGGATT+GGG 0.287004 8_1:-4376194 Msa1173780:CDS
GAAGAAAATCTTCTTGGTCT+TGG 0.291982 8_1:+4371063 None:intergenic
CCCTGGCAAGTTGCCTGATT+TGG 0.297539 8_1:-4377892 Msa1173780:CDS
TTCCTAGTTGCAGCAACATT+AGG 0.310919 8_1:+4376826 None:intergenic
TCCATCCCCGTCGGAGTTGC+CGG 0.311922 8_1:+4374817 None:intergenic
ATTACTGACATACCTCTTCT+TGG 0.312541 8_1:+4374746 None:intergenic
GTGGAAATTCTTGTTCTTTG+TGG 0.315442 8_1:+4378216 None:intergenic
TTTGTCCCTCATACTTTAGA+TGG 0.317721 8_1:-4370953 Msa1173780:CDS
ACAACACTATTGGCCAATTA+GGG 0.321037 8_1:-4376236 Msa1173780:CDS
AATAATGCAGGTAGAAATTT+GGG 0.322510 8_1:-4367301 Msa1173780:CDS
CTCTTAAATTTGCTGTGGAT+TGG 0.326139 8_1:-4376195 Msa1173780:CDS
CATTTACTATTGTCTCTAAT+AGG 0.329746 8_1:+4367826 None:intergenic
GAAGCTTAACCTTAATCCTT+TGG 0.335051 8_1:+4374771 None:intergenic
TCTTAAATTTGCTGTGGAAT+GGG 0.339721 8_1:-4367797 Msa1173780:CDS
CTTGTCCCTCATACTTTAGA+TGG 0.357728 8_1:-4378103 Msa1173780:CDS
AGATAAGCCTGTTGTTCCTT+TGG 0.358733 8_1:-4370700 Msa1173780:CDS
TCCTAGTTGCAGCAACATTA+GGG 0.365225 8_1:+4376827 None:intergenic
AAATTAGCCTTATGAATAAC+AGG 0.368661 8_1:+4377843 None:intergenic
ATGTAACATTGCATTGTAGA+AGG 0.368839 8_1:+4368579 None:intergenic
AAGCTTAACCTTAATCCTTT+GGG 0.369146 8_1:+4374772 None:intergenic
CTCTTAAATTTGCTGTGGAA+TGG 0.371549 8_1:-4367798 Msa1173780:CDS
AACATATCTTAAACTCTTCT+GGG 0.371728 8_1:-4379285 Msa1173780:CDS
TTAGATATTGTTCAGATCAA+TGG 0.371772 8_1:-4377788 Msa1173780:CDS
ACATGTTGCAAAAGGCAAAA+AGG 0.375767 8_1:-4370884 Msa1173780:CDS
TTTGATAGTTGATAGACATT+TGG 0.376339 8_1:-4367090 Msa1173780:three_prime_UTR
AATAGGCCAATAATGTTGTA+AGG 0.379435 8_1:+4367843 None:intergenic
TAGATATTGTCTTTCCAGAT+TGG 0.382916 8_1:-4370611 Msa1173780:CDS
GGTCTTGGAGTCTGTCTTTG+TGG 0.390236 8_1:+4371078 None:intergenic
CAAGAGATGTGTTTACTTTG+TGG 0.399333 8_1:-4370791 Msa1173780:CDS
CAAGAGATGTGTTTACTTTG+TGG 0.400032 8_1:-4377941 Msa1173780:CDS
TGTCTAGTTGGAGCAACATA+AGG 0.400620 8_1:+4368605 None:intergenic
TTATGTTTGATTGTGAAGAT+AGG 0.400717 8_1:-4377866 Msa1173780:CDS
TGGATATTGTGTTCCCAGAT+TGG 0.404783 8_1:-4377761 Msa1173780:CDS
AAAGGTGGTGGTGAAGCATT+TGG 0.405458 8_1:+4377813 None:intergenic
TTATTAAAGTACATAATTGC+AGG 0.406413 8_1:-4378287 Msa1173780:intron
TCTAAATCTAAAGGATCATA+TGG 0.408752 8_1:+4367351 None:intergenic
AGTTAGTGAGAAATACATTA+TGG 0.416709 8_1:-4376329 Msa1173780:CDS
AAATTTGGGAAGATGAATAT+TGG 0.417589 8_1:-4367287 Msa1173780:CDS
GGTTTCAACAAATCCAACTT+AGG 0.419553 8_1:-4368375 Msa1173780:CDS
CATCCCCAAAAGGACCAATC+TGG 0.419621 8_1:+4377747 None:intergenic
ATGTTACATTAGAAAATGAT+TGG 0.422826 8_1:-4368565 Msa1173780:CDS
TGTAAAGTTAAAGGATCATA+TGG 0.424187 8_1:+4375571 None:intergenic
GGATTTGTTGAAACCTTGAT+TGG 0.424372 8_1:+4368383 None:intergenic
GTTTGACTATTAAGATTTGT+TGG 0.424661 8_1:+4378125 None:intergenic
TGGATCCATTACAACACTAT+TGG 0.426661 8_1:-4376246 Msa1173780:CDS
ATGGATCCATCTAAAGTATG+AGG 0.427483 8_1:+4370947 None:intergenic
ATGGATCCATCTAAAGTATG+AGG 0.427483 8_1:+4378097 None:intergenic
AACTTATCCAAAGGAACAAC+AGG 0.427577 8_1:+4370693 None:intergenic
ATGCTACATCAAAAGATGAT+TGG 0.430911 8_1:-4376786 Msa1173780:CDS
AAAGGAGGCGGTGAAGCATT+TGG 0.431656 8_1:+4370663 None:intergenic
TCCAAATCAGGCAACTTGCC+AGG 0.431840 8_1:+4377891 None:intergenic
GTTCCTTTGGATAAGTTTCA+AGG 0.433005 8_1:-4370687 Msa1173780:CDS
TATCCTTCCACTTGGTCTGT+TGG 0.434188 8_1:+4376878 None:intergenic
AAGAGATGTGTTTACTTTGT+GGG 0.437198 8_1:-4370790 Msa1173780:CDS
AAGAGATGTGTTTACTTTGT+GGG 0.437898 8_1:-4377940 Msa1173780:CDS
ACAGCTCCTTGAGGTATAGT+TGG 0.440110 8_1:+4375706 None:intergenic
ACAGCTCCTCTAGGTATAGT+TGG 0.445298 8_1:+4367492 None:intergenic
TCAAACATAAGTTCCAAATC+AGG 0.446282 8_1:+4377879 None:intergenic
TCCAAATCAGGTAACTTGCC+AGG 0.447409 8_1:+4370741 None:intergenic
ATCCTTAAAGTCATAAATGA+AGG 0.447803 8_1:-4368683 Msa1173780:CDS
GGTTACAAGAAATCAAGCTT+AGG 0.447993 8_1:-4376622 Msa1173780:CDS
ATTAATGACATGTGATGTAA+TGG 0.449605 8_1:-4367451 Msa1173780:CDS
TTTGACTATTAAGATTTGTT+GGG 0.449665 8_1:+4378126 None:intergenic
TCAAACATAAGTTCCAAATC+AGG 0.450342 8_1:+4370729 None:intergenic
TGGTACACAAAGGAAATTCA+TGG 0.455426 8_1:-4375647 Msa1173780:CDS
ACAATGGCATGTGATGTAAT+TGG 0.458295 8_1:-4375667 Msa1173780:CDS
TGATTTCTTGTAACCTTGAG+TGG 0.459596 8_1:+4376630 None:intergenic
AGTACATTGGTCCCCTAAGT+TGG 0.460514 8_1:+4368362 None:intergenic
CTTAAATTTGCTGTGGATTG+GGG 0.462415 8_1:-4376193 Msa1173780:CDS
GAAATTCATGGAGGAGTCAA+TGG 0.462936 8_1:-4375635 Msa1173780:CDS
CCCGTCGGAGTTGCCGGTGG+AGG 0.463613 8_1:+4374823 None:intergenic
ACATGGTTGTTGAGATTTGT+TGG 0.465017 8_1:+4370975 None:intergenic
ATAGAGTACCTTATGCGTAT+TGG 0.465578 8_1:-4376858 Msa1173780:CDS
GTTTCAACAAATCCAACTTA+GGG 0.466088 8_1:-4368374 Msa1173780:CDS
ACCCTTAAAGAGATAAAAGA+AGG 0.466174 8_1:-4376904 Msa1173780:CDS
CCTCCACCGGCAACTCCGAC+GGG 0.467619 8_1:-4374823 Msa1173780:CDS
AAAAGCTAATTCAACAAGAC+AGG 0.470223 8_1:-4375533 Msa1173780:intron
ATCTAACAGGCACAGTCAAT+AGG 0.470737 8_1:-4367618 Msa1173780:intron
GGGAAACAAACATGCTGATA+AGG 0.472868 8_1:-4376173 Msa1173780:intron
GTCTAGTTGGAGCAACATAA+GGG 0.474459 8_1:+4368606 None:intergenic
ATTGGCCAATAGTGTTGTAA+TGG 0.475825 8_1:+4376241 None:intergenic
GTTACAAGAAATCAAGCTTA+GGG 0.476523 8_1:-4376621 Msa1173780:CDS
ATGTAGCATTGCATTTCAAA+AGG 0.477688 8_1:+4376800 None:intergenic
AGGTATAAGATTTATATAGA+AGG 0.477784 8_1:-4376364 Msa1173780:CDS
CATCCCCAAAAGGACCAATC+TGG 0.479726 8_1:+4370597 None:intergenic
AGTCTGTCTTTGTGGATGAA+TGG 0.483457 8_1:+4371086 None:intergenic
TTTCTTCTTAAATGCATACA+AGG 0.487305 8_1:-4371047 Msa1173780:CDS
AGGGATCACTAGAGAAATGT+TGG 0.487877 8_1:-4378048 Msa1173780:CDS
TGGTAACAAAAGGAGGTTCA+TGG 0.489195 8_1:-4367427 Msa1173780:CDS
ACCGGCAACTCCGACGGGGA+TGG 0.492383 8_1:-4374818 Msa1173780:CDS
CACAAGGAACATGTTGCAAA+AGG 0.493524 8_1:-4370892 Msa1173780:CDS
TTTAAGGTTGTGATTGTGGA+TGG 0.495644 8_1:-4378002 Msa1173780:CDS
AGGTACAAGATATACATAGA+AGG 0.497660 8_1:-4367967 Msa1173780:CDS
AAATGTATGTGGAAAAGTAT+AGG 0.497830 8_1:-4377977 Msa1173780:CDS
GCACAGTCAATAGGAGAGGC+TGG 0.500817 8_1:-4367609 Msa1173780:CDS
GTACCTTATGCTTATTGGAA+GGG 0.503766 8_1:-4368632 Msa1173780:CDS
TACCTTATGCTTATTGGAAG+GGG 0.503930 8_1:-4368631 Msa1173780:CDS
GGACAACGTAGAGGGAATAC+TGG 0.504237 8_1:-4374867 Msa1173780:CDS
AGTTGCCGGTGGAGGCTTCA+CGG 0.506650 8_1:+4374831 None:intergenic
CACCTCTCTTAAATTTGCTG+TGG 0.506812 8_1:-4376200 Msa1173780:CDS
CATGGTTGTTGAGATTTGTT+GGG 0.508593 8_1:+4370976 None:intergenic
TTTATATAGAAGGATGGGCT+TGG 0.509845 8_1:-4376354 Msa1173780:CDS
TTCAAGCTTGTGATTGTGGA+TGG 0.510075 8_1:-4370852 Msa1173780:CDS
TGCTTATGTGGATGGATGAA+AGG 0.511051 8_1:+4378243 None:intergenic
TTCCCCTTCCAATACGCATA+AGG 0.511345 8_1:+4376850 None:intergenic
AGATAGGCCTGTTATTCATA+AGG 0.511562 8_1:-4377850 Msa1173780:CDS
AAAAGCTAATTCAATAATGC+AGG 0.515286 8_1:-4367313 Msa1173780:CDS
TTCCCCTTCCAATAAGCATA+AGG 0.515441 8_1:+4368629 None:intergenic
GCCTCCACCGGCAACTCCGA+CGG 0.516201 8_1:-4374824 Msa1173780:CDS
GAGGTTCATGGAAGAGTCAA+TGG 0.516306 8_1:-4367415 Msa1173780:CDS
CTTAAATTTGCTGTGGAATG+GGG 0.516885 8_1:-4367796 Msa1173780:CDS
AGATGTATGTGGAAAAGTAT+AGG 0.517281 8_1:-4370827 Msa1173780:CDS
TAGGGGACCAATGTACTCAT+AGG 0.518424 8_1:-4368356 Msa1173780:intron
GAGATGTTTCTTCACCAAGA+AGG 0.520532 8_1:-4379243 Msa1173780:CDS
ATAAGATTTATATAGAAGGA+TGG 0.521449 8_1:-4376360 Msa1173780:CDS
ATCCCCAAAAGGACCAATCT+GGG 0.523594 8_1:+4377748 None:intergenic
TCTCCATTGGTGCATCTAAG+TGG 0.528007 8_1:+4378197 None:intergenic
ACAAGATATACATAGAAGGA+TGG 0.528604 8_1:-4367963 Msa1173780:CDS
CAAATTTCCACAGCTCCTCT+AGG 0.531706 8_1:+4367483 None:intergenic
AGTACCTTATGCTTATTGGA+AGG 0.533255 8_1:-4368633 Msa1173780:CDS
GGGCAACAATCACACTCATA+AGG 0.533532 8_1:-4367776 Msa1173780:intron
TTGTTCAGATCAATGGAGCT+TGG 0.533796 8_1:-4377781 Msa1173780:CDS
GTACCTTATGCGTATTGGAA+GGG 0.533965 8_1:-4376853 Msa1173780:CDS
CACCTCTCTTAAATTTGCTG+TGG 0.534214 8_1:-4367803 Msa1173780:CDS
TATGAAAGAGAGTGTTGGAA+GGG 0.535251 8_1:+4379401 None:intergenic
TATACATAGAAGGATGGGCT+TGG 0.537356 8_1:-4367957 Msa1173780:CDS
GAACACTCTCATATACATAC+AGG 0.538416 8_1:-4368543 Msa1173780:intron
TAAGATTTATATAGAAGGAT+GGG 0.538690 8_1:-4376359 Msa1173780:CDS
ACTGACATACCTCTTCTTGG+AGG 0.545373 8_1:+4374749 None:intergenic
TATTAAAGTACATAATTGCA+GGG 0.546277 8_1:-4378286 Msa1173780:intron
TACCTTATGCGTATTGGAAG+GGG 0.549376 8_1:-4376852 Msa1173780:CDS
TAGTACTTACCATCCCCAAA+AGG 0.554356 8_1:+4377737 None:intergenic
TAGGACTTACCATCCCCAAA+AGG 0.555947 8_1:+4370587 None:intergenic
ATATGAAAGAGAGTGTTGGA+AGG 0.556828 8_1:+4379400 None:intergenic
AGTACCTTATGCGTATTGGA+AGG 0.557377 8_1:-4376854 Msa1173780:CDS
GTATATATGAAAGAGAGTGT+TGG 0.559027 8_1:+4379396 None:intergenic
TTAATGACATGTGATGTAAT+GGG 0.559079 8_1:-4367450 Msa1173780:CDS
ACATTTCAAGCTTGTGATTG+TGG 0.560222 8_1:-4370856 Msa1173780:CDS
GGTCCTTGAAACTTATCCAA+AGG 0.560298 8_1:+4370684 None:intergenic
AGAGATGTGTTTACTTTGTG+GGG 0.562043 8_1:-4377939 Msa1173780:CDS
AGAGATGTGTTTACTTTGTG+GGG 0.562176 8_1:-4370789 Msa1173780:CDS
CAAGATATACATAGAAGGAT+GGG 0.562972 8_1:-4367962 Msa1173780:CDS
GGACTTTACATATAATGTCA+TGG 0.570834 8_1:+4367900 None:intergenic
TGGATACAAGAATCCAATCA+AGG 0.571881 8_1:-4368396 Msa1173780:CDS
GTTAAAGGATCATATGGAGG+AGG 0.572145 8_1:+4375577 None:intergenic
AACTATACCTCAAGGAGCTG+TGG 0.573210 8_1:-4375704 Msa1173780:CDS
TTTCCACTTAGATGCACCAA+TGG 0.577671 8_1:-4378200 Msa1173780:CDS
AACTATACCTAGAGGAGCTG+TGG 0.578398 8_1:-4367490 Msa1173780:CDS
CAGAGACAAATATAAAGCCA+TGG 0.587033 8_1:-4368712 Msa1173780:CDS
CAGAGACAAATATAAAGCCA+TGG 0.587033 8_1:-4376933 Msa1173780:CDS
TCCATGAAGATCTAAAACCA+TGG 0.587436 8_1:-4370929 Msa1173780:CDS
TCTAAAGGATCATATGGAGG+AGG 0.587652 8_1:+4367357 None:intergenic
CCAAATCAGGCAACTTGCCA+GGG 0.588415 8_1:+4377892 None:intergenic
GGGTCTAACATATAATGTCA+TGG 0.588604 8_1:+4376297 None:intergenic
ATAGGCCAATAATGTTGTAA+GGG 0.591312 8_1:+4367844 None:intergenic
TAGGGAATCAATGCACCCAT+AGG 0.592624 8_1:-4376603 Msa1173780:intron
GAAGGGAGAGAGAATGAACA+TGG 0.595451 8_1:+4379418 None:intergenic
GACGACCGTGAAGCCTCCAC+CGG 0.595597 8_1:-4374836 Msa1173780:CDS
ATAGCTACCACCACTGTGGT+TGG 0.596622 8_1:-4379209 Msa1173780:CDS
CAATATCTAAACAAAGGTGG+TGG 0.597320 8_1:+4377801 None:intergenic
CCAAATCAGGTAACTTGCCA+GGG 0.599314 8_1:+4370742 None:intergenic
GTTAAGCTTCCTCCAAGAAG+AGG 0.602545 8_1:-4374758 Msa1173780:intron
CATGGAAGAGTCAATGGTGA+AGG 0.603386 8_1:-4367409 Msa1173780:CDS
TATGGAGGAGGAATAGTGCA+TGG 0.604369 8_1:+4367369 None:intergenic
TATGGAGGAGGAATAGTGCA+TGG 0.604369 8_1:+4375589 None:intergenic
ACCCTAATGTTGCTGCAACT+AGG 0.605182 8_1:-4376828 Msa1173780:CDS
CATGGAGGAGTCAATGGTGA+AGG 0.605682 8_1:-4375629 Msa1173780:CDS
TTTAAACCAACTATACCTCA+AGG 0.606630 8_1:-4375712 Msa1173780:CDS
ATCCCCGTCGGAGTTGCCGG+TGG 0.606823 8_1:+4374820 None:intergenic
CGTTGCTTATGATTGCCCAA+AGG 0.606942 8_1:-4374787 Msa1173780:CDS
TCCTTAAAGTCATAAATGAA+GGG 0.609424 8_1:-4368682 Msa1173780:CDS
TATCTTAAACTCTTCTGGGG+TGG 0.610291 8_1:-4379281 Msa1173780:CDS
TCCATGAAGATTTAAAACCA+TGG 0.611046 8_1:-4378079 Msa1173780:CDS
AAGGGAACCAACAGACCAAG+TGG 0.618221 8_1:-4376885 Msa1173780:CDS
ATGTAATGGGTGGTAACAAA+AGG 0.619846 8_1:-4367437 Msa1173780:CDS
TGTGGATGGAAAGATGTATG+TGG 0.621271 8_1:-4370838 Msa1173780:CDS
TGGATCCATCTAAAGTATGA+GGG 0.622254 8_1:+4370948 None:intergenic
TGGATCCATCTAAAGTATGA+GGG 0.622254 8_1:+4378098 None:intergenic
CAATATCTAAACAAAGGAGG+CGG 0.622297 8_1:+4370651 None:intergenic
AAAGTTAAAGGATCATATGG+AGG 0.624764 8_1:+4375574 None:intergenic
ATCACTAGAGAAATGTTGGA+AGG 0.629506 8_1:-4378044 Msa1173780:CDS
TAATGGGTGGTAACAAAAGG+AGG 0.630766 8_1:-4367434 Msa1173780:CDS
TCTGAACAATATCTAAACAA+AGG 0.632316 8_1:+4370645 None:intergenic
TGGTAGCAAATTCATACAAG+AGG 0.633461 8_1:-4367589 Msa1173780:CDS
TCACCTACCTATGAGTACAT+TGG 0.633848 8_1:+4368349 None:intergenic
TTCCACAGCAAATTTAAGAG+AGG 0.634434 8_1:+4367801 None:intergenic
GAACAATATCTAAACAAAGG+TGG 0.635135 8_1:+4377798 None:intergenic
GCTAGTTTGGACAACGTAGA+GGG 0.635978 8_1:-4374875 Msa1173780:CDS
CCCTTAAAGAGATAAAAGAA+GGG 0.639732 8_1:-4376903 Msa1173780:CDS
TGGGATAAAGAATCCACTCA+AGG 0.640081 8_1:-4376643 Msa1173780:CDS
TCTGAACAATATCTAAACAA+AGG 0.640511 8_1:+4377795 None:intergenic
GAACAATATCTAAACAAAGG+AGG 0.640570 8_1:+4370648 None:intergenic
GGCTAGTTTGGACAACGTAG+AGG 0.641045 8_1:-4374876 Msa1173780:CDS
CAATTATTGAGAATGTACCC+TGG 0.642475 8_1:-4370759 Msa1173780:CDS
CAATTATTGAGAATGTACCC+TGG 0.642475 8_1:-4377909 Msa1173780:CDS
GTGATGTAATTGGTACACAA+AGG 0.644655 8_1:-4375657 Msa1173780:CDS
GTGCATGGATTTAAATCACT+AGG 0.647032 8_1:+4375604 None:intergenic
GAACCAACAGACCAAGTGGA+AGG 0.647617 8_1:-4376881 Msa1173780:CDS
CAAAACTCCACAGCTCCTTG+AGG 0.648484 8_1:+4375697 None:intergenic
AGGTACTCTATCCTTCCACT+TGG 0.660422 8_1:+4368649 None:intergenic
AGGTACTCTATCCTTCCACT+TGG 0.660422 8_1:+4376870 None:intergenic
TAAAGTATGAGGGACAAACA+TGG 0.661067 8_1:+4370958 None:intergenic
AGGCTTCACGGTCGTCGTCG+CGG 0.661887 8_1:+4374843 None:intergenic
ATCCACAGCAAATTTAAGAG+AGG 0.664997 8_1:+4376198 None:intergenic
AAACAAACCAACCACAGTGG+TGG 0.666348 8_1:+4379202 None:intergenic
AAATCTAAAGGATCATATGG+AGG 0.667890 8_1:+4367354 None:intergenic
TTTCAACAAATCCAACTTAG+GGG 0.669976 8_1:-4368373 Msa1173780:CDS
ACAGGCACAGTCAATAGGAG+AGG 0.670596 8_1:-4367613 Msa1173780:intron
ATTCAACTCAAACATGAACA+AGG 0.670929 8_1:-4379315 Msa1173780:exon
ACATATCTTAAACTCTTCTG+GGG 0.672048 8_1:-4379284 Msa1173780:CDS
CGAAAGAAATCCATCCCCGT+CGG 0.673085 8_1:+4374808 None:intergenic
CTCCACCGGCAACTCCGACG+GGG 0.681589 8_1:-4374822 Msa1173780:CDS
TTCAAACCAACTATACCTAG+AGG 0.684725 8_1:-4367498 Msa1173780:CDS
TACAATAGCTACCACCACTG+TGG 0.741658 8_1:-4379213 Msa1173780:CDS
ATGACATGTGATGTAATGGG+TGG 0.745292 8_1:-4367447 Msa1173780:CDS
TACACAAAGGAAATTCATGG+AGG 0.749892 8_1:-4375644 Msa1173780:CDS
ACAAAACAAACCAACCACAG+TGG 0.751123 8_1:+4379199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAAAATAAAAATTA+GGG + chr8_1:4377659-4377678 None:intergenic 0.0%
!! TAAATAAATAAATAAAAAAA+AGG + chr8_1:4379302-4379321 None:intergenic 0.0%
!!! TTTATTTATTTTTTTATAAT+AGG - chr8_1:4379318-4379337 Msa1173780:exon 0.0%
!! TAATGCAAAAAAAAAAAAAA+AGG + chr8_1:4370101-4370120 None:intergenic 10.0%
!! TATATATATAATCATAAAGT+AGG + chr8_1:4374544-4374563 None:intergenic 10.0%
!! ATAAATTAAATAGCTAAAAA+GGG + chr8_1:4375139-4375158 None:intergenic 10.0%
!! AATAAATTAAATAGCTAAAA+AGG + chr8_1:4375140-4375159 None:intergenic 10.0%
!!! ATTTTTTTATAGAAAAATGT+TGG - chr8_1:4375341-4375360 Msa1173780:intron 10.0%
!! AACTTTGATAAAAATATATA+GGG + chr8_1:4377428-4377447 None:intergenic 10.0%
!! AAATATTACCATTACATAAA+TGG + chr8_1:4369349-4369368 None:intergenic 15.0%
!! TGACTTTCTTAAATTATTAA+CGG + chr8_1:4370492-4370511 None:intergenic 15.0%
!!! CATGTAATTTTGTAAATTTA+AGG + chr8_1:4371136-4371155 None:intergenic 15.0%
!!! TTTGTTTTTACTCTAATTTT+TGG + chr8_1:4371217-4371236 None:intergenic 15.0%
!!! AATCCAAATAAAAATTTGTT+AGG + chr8_1:4371332-4371351 None:intergenic 15.0%
!! TTTAAAGAATTTGAAGAAAA+TGG - chr8_1:4371903-4371922 Msa1173780:intron 15.0%
!!! AATCAACACAAATATATTTT+CGG - chr8_1:4372466-4372485 Msa1173780:intron 15.0%
!! GTTATTCATATTAAGTTAAA+GGG + chr8_1:4373529-4373548 None:intergenic 15.0%
!! TGTTATTCATATTAAGTTAA+AGG + chr8_1:4373530-4373549 None:intergenic 15.0%
!! AAACAAAAATTGAGTATTAT+TGG + chr8_1:4374511-4374530 None:intergenic 15.0%
!! ATATATACAAAATTAACAAG+TGG - chr8_1:4374557-4374576 Msa1173780:intron 15.0%
!! AAATATATTTGCTTAAATCT+AGG + chr8_1:4374660-4374679 None:intergenic 15.0%
!! ACACTATTATTATATAACAA+TGG - chr8_1:4375027-4375046 Msa1173780:intron 15.0%
!! CACTATTATTATATAACAAT+GGG - chr8_1:4375028-4375047 Msa1173780:intron 15.0%
!!! TAGCTATTTAATTTATTCAA+TGG - chr8_1:4375143-4375162 Msa1173780:intron 15.0%
!!! ATTTCAATATTAGATTTTCT+TGG + chr8_1:4375382-4375401 None:intergenic 15.0%
!! ATTGCAAATTTATATTATTC+AGG - chr8_1:4376411-4376430 Msa1173780:intron 15.0%
!! TTATTCAATGAATCTAAAAA+AGG + chr8_1:4376497-4376516 None:intergenic 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG + chr8_1:4376571-4376590 None:intergenic 15.0%
!! TTAAACTAGGTTATTTAAAA+TGG - chr8_1:4376868-4376887 Msa1173780:CDS 15.0%
!!! TAAACTAGGTTATTTAAAAT+GGG - chr8_1:4376869-4376888 Msa1173780:CDS 15.0%
!! TAATTAACCCAAATATATAA+TGG + chr8_1:4377133-4377152 None:intergenic 15.0%
!! CAAAACTGTAAATATTTATA+AGG + chr8_1:4377166-4377185 None:intergenic 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG - chr8_1:4377353-4377372 Msa1173780:intron 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG - chr8_1:4377354-4377373 Msa1173780:intron 15.0%
!! CAACTTTGATAAAAATATAT+AGG + chr8_1:4377429-4377448 None:intergenic 15.0%
!!! CTATATATTTTTATCAAAGT+TGG - chr8_1:4377427-4377446 Msa1173780:intron 15.0%
!! ATAAAAATAAAAATTAGGGT+CGG + chr8_1:4377655-4377674 None:intergenic 15.0%
!! TAATATTCTTTACTTAAAAC+AGG - chr8_1:4377787-4377806 Msa1173780:CDS 15.0%
!! AATATTCTTTACTTAAAACA+GGG - chr8_1:4377788-4377807 Msa1173780:CDS 15.0%
!!! TATTTTTTTCCCATTAATTA+TGG - chr8_1:4378003-4378022 Msa1173780:CDS 15.0%
!! TCAAAGTAAAATAAAATCAT+AGG + chr8_1:4378819-4378838 None:intergenic 15.0%
!! AATGTAACAAAAAAATTTCA+TGG + chr8_1:4378863-4378882 None:intergenic 15.0%
!! AAAAATTCTTCTAAATCTAA+AGG + chr8_1:4379184-4379203 None:intergenic 15.0%
!!! TTAGATTTAGAAGAATTTTT+AGG - chr8_1:4379184-4379203 Msa1173780:CDS 15.0%
!!! TAGATTTAGAAGAATTTTTA+GGG - chr8_1:4379185-4379204 Msa1173780:CDS 15.0%
!! TTTACTATTTAGATAGTATT+TGG + chr8_1:4379467-4379486 None:intergenic 15.0%
!! TTAGTATGAAAAATTAGCAA+TGG - chr8_1:4367438-4367457 Msa1173780:CDS 20.0%
!!! AATTTGTCTCTAATTTTGTT+AGG - chr8_1:4367471-4367490 Msa1173780:CDS 20.0%
!!! GCTCAAATAAGTATTTTTTA+AGG - chr8_1:4367650-4367669 Msa1173780:intron 20.0%
!! AAAGTAATTGGATCAAATTT+GGG + chr8_1:4368187-4368206 None:intergenic 20.0%
!! TTATTAAAGTACATAATTGC+AGG - chr8_1:4368236-4368255 Msa1173780:intron 20.0%
!! TATTAAAGTACATAATTGCA+GGG - chr8_1:4368237-4368256 Msa1173780:intron 20.0%
!!! TTTGACTATTAAGATTTGTT+GGG + chr8_1:4368400-4368419 None:intergenic 20.0%
!!! AAAATATTTGCGATGTTTTT+CGG + chr8_1:4368866-4368885 None:intergenic 20.0%
!!! TACGGTTTTTAAAAATATCA+AGG + chr8_1:4368945-4368964 None:intergenic 20.0%
!!! ACTCTCAAATTATTTTATGT+TGG - chr8_1:4369073-4369092 Msa1173780:intron 20.0%
!!! ACATTTTTTGCTTATAAGTT+GGG - chr8_1:4369117-4369136 Msa1173780:intron 20.0%
!! TTGTATGATATAACTATTTG+TGG + chr8_1:4369215-4369234 None:intergenic 20.0%
!!! TTTTTGACAAAAAGTAAAGT+TGG - chr8_1:4369382-4369401 Msa1173780:intron 20.0%
!! TGATATTCTTTACATAAAAC+AGG - chr8_1:4369566-4369585 Msa1173780:intron 20.0%
!! GATATTCTTTACATAAAACA+GGG - chr8_1:4369567-4369586 Msa1173780:intron 20.0%
!! AGAAAAATACTTGTATGTAT+AGG + chr8_1:4369771-4369790 None:intergenic 20.0%
!! TATATATATGTTTGTGTCAT+AGG - chr8_1:4369855-4369874 Msa1173780:intron 20.0%
!! TTGATATTGATATTACCTAT+GGG + chr8_1:4369938-4369957 None:intergenic 20.0%
!! TCATAAAATTTAAACTTTGC+TGG + chr8_1:4370025-4370044 None:intergenic 20.0%
!! AGGTATAAGATTTATATAGA+AGG - chr8_1:4370159-4370178 Msa1173780:intron 20.0%
!! ATAAGATTTATATAGAAGGA+TGG - chr8_1:4370163-4370182 Msa1173780:intron 20.0%
!! TAAGATTTATATAGAAGGAT+GGG - chr8_1:4370164-4370183 Msa1173780:intron 20.0%
!! ATGAAAAAGTCATAGAAATT+GGG + chr8_1:4370249-4370268 None:intergenic 20.0%
!! AAAAGTTCATGTAAAGTTAA+AGG + chr8_1:4370964-4370983 None:intergenic 20.0%
!! AATTAGTATTTACCGAATAA+CGG - chr8_1:4371161-4371180 Msa1173780:intron 20.0%
!!! CAAATAAAAATTTGTTAGGT+TGG + chr8_1:4371328-4371347 None:intergenic 20.0%
!!! CAACCTAACAAATTTTTATT+TGG - chr8_1:4371326-4371345 Msa1173780:intron 20.0%
!! TAACTACTCTAGTAATATAA+AGG + chr8_1:4372513-4372532 None:intergenic 20.0%
!! TTATATTACTAGAGTAGTTA+AGG - chr8_1:4372513-4372532 Msa1173780:intron 20.0%
!!! ACTGAAATTTTCAATGATAA+AGG + chr8_1:4372631-4372650 None:intergenic 20.0%
!! TAGGAATTATAAGAAGTAAA+AGG + chr8_1:4373135-4373154 None:intergenic 20.0%
!! TCTATAAATGAGTAAAATGT+TGG - chr8_1:4373270-4373289 Msa1173780:intron 20.0%
!! ATATGAATAACAAACAATGT+TGG - chr8_1:4373538-4373557 Msa1173780:intron 20.0%
!! TATGAATAACAAACAATGTT+GGG - chr8_1:4373539-4373558 Msa1173780:intron 20.0%
!! AAAGTTGTAAGTAAAATCTT+AGG - chr8_1:4373704-4373723 Msa1173780:intron 20.0%
!! AAGTTGTAAGTAAAATCTTA+GGG - chr8_1:4373705-4373724 Msa1173780:intron 20.0%
!! ATTCATGAATTACAAAGATT+TGG + chr8_1:4374205-4374224 None:intergenic 20.0%
!!! TAATCATAAAGTAGGAATTT+TGG + chr8_1:4374536-4374555 None:intergenic 20.0%
!! AATGTTCACATAATGATAAA+GGG + chr8_1:4375219-4375238 None:intergenic 20.0%
!! AAATGTTCACATAATGATAA+AGG + chr8_1:4375220-4375239 None:intergenic 20.0%
!! TTGTGACATATAATTGATAT+AGG - chr8_1:4375286-4375305 Msa1173780:intron 20.0%
!!! TTTTTAAAGTACATAATTGC+AGG - chr8_1:4375404-4375423 Msa1173780:intron 20.0%
!! ATTTAAGAAGAAAATCTTCT+TGG + chr8_1:4375469-4375488 None:intergenic 20.0%
!! GATAAAAAGAAGTTATGTTT+AGG + chr8_1:4375958-4375977 None:intergenic 20.0%
!! GAAGTAGTATATAAATAGAA+AGG + chr8_1:4375980-4375999 None:intergenic 20.0%
!!! TCTATAAGCTTTTCTATTAT+AGG + chr8_1:4376106-4376125 None:intergenic 20.0%
!! TTATAGAAAATAAGCTTAGA+TGG - chr8_1:4376119-4376138 Msa1173780:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - chr8_1:4376581-4376600 Msa1173780:intron 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG + chr8_1:4376702-4376721 None:intergenic 20.0%
!!! ATAGTACACATTTTTAAACT+AGG - chr8_1:4376855-4376874 Msa1173780:CDS 20.0%
!!! AGACATTGAAAAGTTTTATA+AGG - chr8_1:4376928-4376947 Msa1173780:CDS 20.0%
!! AATAACCACCATTATATATT+TGG - chr8_1:4377122-4377141 Msa1173780:intron 20.0%
!! ATAACCACCATTATATATTT+GGG - chr8_1:4377123-4377142 Msa1173780:intron 20.0%
!!! ACATTTTCTTTAAGCATTTT+AGG - chr8_1:4377230-4377249 Msa1173780:intron 20.0%
!!! CATTTTCTTTAAGCATTTTA+GGG - chr8_1:4377231-4377250 Msa1173780:intron 20.0%
!! ACAAAATTCTGAATATTTGT+AGG - chr8_1:4377384-4377403 Msa1173780:intron 20.0%
!! CAAAATTCTGAATATTTGTA+GGG - chr8_1:4377385-4377404 Msa1173780:intron 20.0%
!! TATAGGGTTAATTAAGTAAA+TGG + chr8_1:4377412-4377431 None:intergenic 20.0%
!! ATGTTACATTAGAAAATGAT+TGG - chr8_1:4377958-4377977 Msa1173780:CDS 20.0%
!! CAAATTCATCCATAATTAAT+GGG + chr8_1:4378015-4378034 None:intergenic 20.0%
!! ACAAATTCATCCATAATTAA+TGG + chr8_1:4378016-4378035 None:intergenic 20.0%
!!! ATTCCTTTGATGTTAATTTT+AGG + chr8_1:4378039-4378058 None:intergenic 20.0%
!! GTTAAGAGTTAGTTATATAT+CGG + chr8_1:4378486-4378505 None:intergenic 20.0%
!! AGTTAGTGAAAAATACATTA+TGG - chr8_1:4378591-4378610 Msa1173780:intron 20.0%
!! TATGAAAAAATCATGGTAAT+TGG + chr8_1:4378647-4378666 None:intergenic 20.0%
!!! GATTTTATTTTACTTTGACT+TGG - chr8_1:4378821-4378840 Msa1173780:intron 20.0%
! AAACATATCTTAAACTCTTC+TGG - chr8_1:4367237-4367256 Msa1173780:three_prime_UTR 25.0%
! AACATATCTTAAACTCTTCT+GGG - chr8_1:4367238-4367257 Msa1173780:three_prime_UTR 25.0%
! AACATATAACACAACTAATG+AGG + chr8_1:4367589-4367608 None:intergenic 25.0%
! TTTATGTATTATCAACACCA+TGG - chr8_1:4367607-4367626 Msa1173780:CDS 25.0%
! TTAAGTCATAAATTGAACCA+AGG + chr8_1:4367694-4367713 None:intergenic 25.0%
! AGTCTCTTTCACTTAAATAT+CGG - chr8_1:4367767-4367786 Msa1173780:intron 25.0%
! CAATAAAAAGAACATGTGTT+GGG + chr8_1:4368003-4368022 None:intergenic 25.0%
! TCAATAAAAAGAACATGTGT+TGG + chr8_1:4368004-4368023 None:intergenic 25.0%
! ATATGTTGTGACATAATTCT+AGG - chr8_1:4368160-4368179 Msa1173780:intron 25.0%
! CAAAGTAATTGGATCAAATT+TGG + chr8_1:4368188-4368207 None:intergenic 25.0%
! TAGTTTCTTGTCAAAGTAAT+TGG + chr8_1:4368199-4368218 None:intergenic 25.0%
! GTTTGACTATTAAGATTTGT+TGG + chr8_1:4368401-4368420 None:intergenic 25.0%
!! AAGAAGAACAGCAAATTTTA+AGG - chr8_1:4368505-4368524 Msa1173780:intron 25.0%
!!! AAATTTTAAGGTTGTGATTG+TGG - chr8_1:4368517-4368536 Msa1173780:intron 25.0%
!! AAATGTATGTGGAAAAGTAT+AGG - chr8_1:4368546-4368565 Msa1173780:CDS 25.0%
! TTATGTTTGATTGTGAAGAT+AGG - chr8_1:4368657-4368676 Msa1173780:CDS 25.0%
!!! AAATTAGCCTTATGAATAAC+AGG + chr8_1:4368683-4368702 None:intergenic 25.0%
!! ATTCATAAGGCTAATTTTCA+AGG - chr8_1:4368686-4368705 Msa1173780:CDS 25.0%
! TCTGAACAATATCTAAACAA+AGG + chr8_1:4368731-4368750 None:intergenic 25.0%
! TTAGATATTGTTCAGATCAA+TGG - chr8_1:4368735-4368754 Msa1173780:intron 25.0%
! ATCTCATTCTACAAATAGAA+AGG + chr8_1:4368830-4368849 None:intergenic 25.0%
! TTCTCAACTACATTGTAAAA+TGG - chr8_1:4368899-4368918 Msa1173780:intron 25.0%
!!! GGTTTTTAAAAATATCAAGG+AGG + chr8_1:4368942-4368961 None:intergenic 25.0%
!!! GATATTTTTAAAAACCGTAC+CGG - chr8_1:4368946-4368965 Msa1173780:intron 25.0%
!!! ATATTTTTAAAAACCGTACC+GGG - chr8_1:4368947-4368966 Msa1173780:intron 25.0%
! TCAAAGAACTGAAACAAAAA+CGG + chr8_1:4368980-4368999 None:intergenic 25.0%
!!! CTCAAATTATTTTATGTTGG+AGG - chr8_1:4369076-4369095 Msa1173780:intron 25.0%
!!! CACATTTTTTGCTTATAAGT+TGG - chr8_1:4369116-4369135 Msa1173780:intron 25.0%
! AACCTAATAAAATGACAACA+TGG + chr8_1:4369176-4369195 None:intergenic 25.0%
! CTTGATATTGATATTACCTA+TGG + chr8_1:4369939-4369958 None:intergenic 25.0%
! AATCATATGTTCTTGTAACT+TGG - chr8_1:4369973-4369992 Msa1173780:intron 25.0%
!! CTTAATTTTATGTGCATTGT+TGG - chr8_1:4370133-4370152 Msa1173780:intron 25.0%
! AGTTAGTGAGAAATACATTA+TGG - chr8_1:4370194-4370213 Msa1173780:intron 25.0%
! GATGAAAAAGTCATAGAAAT+TGG + chr8_1:4370250-4370269 None:intergenic 25.0%
! CATTTACTATTATCCCTAAT+TGG + chr8_1:4370303-4370322 None:intergenic 25.0%
!!! AATAAAGTCATGTTTGTTGT+TGG + chr8_1:4370391-4370410 None:intergenic 25.0%
!! AACATGACTTTATTTGATTG+TGG - chr8_1:4370397-4370416 Msa1173780:intron 25.0%
! ATATCTTACATTCCCTAAAA+TGG - chr8_1:4370669-4370688 Msa1173780:CDS 25.0%
! TGTAAAGTTAAAGGATCATA+TGG + chr8_1:4370955-4370974 None:intergenic 25.0%
! AAATTTGGGAAGATGAATAT+TGG - chr8_1:4371016-4371035 Msa1173780:CDS 25.0%
!! TATTGGCTGAATAAAAAGAA+TGG - chr8_1:4371033-4371052 Msa1173780:CDS 25.0%
! AAAAAGAATGGACAATAGTA+TGG - chr8_1:4371045-4371064 Msa1173780:CDS 25.0%
!! TGTATGATTTTTCCGTTATT+CGG + chr8_1:4371176-4371195 None:intergenic 25.0%
! TAAAATGCTTCTGCATAAAA+AGG + chr8_1:4371296-4371315 None:intergenic 25.0%
! TTTGATAAAATCAAAGCTCA+TGG - chr8_1:4371373-4371392 Msa1173780:intron 25.0%
!!! TTTTGAGAGACTATTTTTTG+TGG - chr8_1:4371449-4371468 Msa1173780:intron 25.0%
! TTTGAAGAAAATGGAATAAG+CGG + chr8_1:4371565-4371584 None:intergenic 25.0%
!! TACACTTGATTTGAAGAAAA+TGG + chr8_1:4371574-4371593 None:intergenic 25.0%
!!! CTCTTTTTCATATATGCAAT+GGG + chr8_1:4371614-4371633 None:intergenic 25.0%
!!! TCTCTTTTTCATATATGCAA+TGG + chr8_1:4371615-4371634 None:intergenic 25.0%
! AAAAAGAGAGAAAATCTTGA+AGG - chr8_1:4371626-4371645 Msa1173780:intron 25.0%
! ATTAAGCAACATTGATGAAT+AGG + chr8_1:4371808-4371827 None:intergenic 25.0%
! AATAAAATTGAGAGAGACAA+AGG - chr8_1:4371836-4371855 Msa1173780:intron 25.0%
!!! TTTTTAGTGACTATGCTTAT+GGG + chr8_1:4371992-4372011 None:intergenic 25.0%
!!! TTTTTTAGTGACTATGCTTA+TGG + chr8_1:4371993-4372012 None:intergenic 25.0%
! TAGTTCAAATGAAAATGTGA+TGG - chr8_1:4372111-4372130 Msa1173780:intron 25.0%
! TCTAATCACTTGGTAAAAAA+AGG - chr8_1:4372571-4372590 Msa1173780:intron 25.0%
! ATTGAAAATTTCAGTTCTTC+AGG - chr8_1:4372636-4372655 Msa1173780:intron 25.0%
! ATTGAGACAGAAAATTGATA+TGG - chr8_1:4372861-4372880 Msa1173780:intron 25.0%
! TTGAGACAGAAAATTGATAT+GGG - chr8_1:4372862-4372881 Msa1173780:intron 25.0%
! TAGATTTACTTTCTATGGTT+TGG - chr8_1:4373382-4373401 Msa1173780:intron 25.0%
! TAAGAGAAAGTAACAAAGAA+AGG + chr8_1:4373773-4373792 None:intergenic 25.0%
! TATAAAGGAATGAAAGTGAA+TGG + chr8_1:4373826-4373845 None:intergenic 25.0%
!! TGAAAGGAAAGAAAGTATAA+AGG + chr8_1:4373841-4373860 None:intergenic 25.0%
! AGTTTGGTCAATTATGTATT+GGG + chr8_1:4373996-4374015 None:intergenic 25.0%
! GTCAAAAAAAGATTTGGATT+AGG + chr8_1:4374172-4374191 None:intergenic 25.0%
! GAATTACAAAGATTTGGATT+AGG + chr8_1:4374199-4374218 None:intergenic 25.0%
! TTCAAATCAACAATCAAGAT+TGG + chr8_1:4374256-4374275 None:intergenic 25.0%
! GTTGTATAATCTTAAATTGG+CGG + chr8_1:4374330-4374349 None:intergenic 25.0%
! TCGGTTGTATAATCTTAAAT+TGG + chr8_1:4374333-4374352 None:intergenic 25.0%
! ATATTTGCTTAAATCTAGGA+AGG + chr8_1:4374656-4374675 None:intergenic 25.0%
!!! TTTCTATTTTTGAGTATCCT+TGG + chr8_1:4375113-4375132 None:intergenic 25.0%
!!! AAATGCCAATAGTTCTAATT+TGG + chr8_1:4375249-4375268 None:intergenic 25.0%
! GACATATAATTGATATAGGA+AGG - chr8_1:4375290-4375309 Msa1173780:intron 25.0%
! TTTCTTCTTAAATGCATACA+AGG - chr8_1:4375476-4375495 Msa1173780:intron 25.0%
! TCTGAACAATATCTAAACAA+AGG + chr8_1:4368731-4368750 None:intergenic 25.0%
!! ACATAGTTCTATATTTAGAG+AGG + chr8_1:4376002-4376021 None:intergenic 25.0%
! AAAATAAGCTTAGATGGTTT+GGG - chr8_1:4376125-4376144 Msa1173780:intron 25.0%
!! GTTTATCTTATAGTTTTCGT+AGG + chr8_1:4376235-4376254 None:intergenic 25.0%
! AACCATTAGAAATGATTTAG+AGG - chr8_1:4376252-4376271 Msa1173780:CDS 25.0%
!! AAGTCTTATCTCACTAAATA+GGG + chr8_1:4376345-4376364 None:intergenic 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG + chr8_1:4376472-4376491 None:intergenic 25.0%
! CATTGAGTAGTTAATGTATT+TGG + chr8_1:4376546-4376565 None:intergenic 25.0%
! TAAAAAAATATTACTCCCTC+CGG + chr8_1:4376603-4376622 None:intergenic 25.0%
!!! GAAAAGTTTTATAAGGAGAA+AGG - chr8_1:4376935-4376954 Msa1173780:CDS 25.0%
! TTAACCCAAATATATAATGG+TGG + chr8_1:4377130-4377149 None:intergenic 25.0%
!! AAAGATTTCCATCAACATTT+TGG + chr8_1:4377258-4377277 None:intergenic 25.0%
!! AATTTTTCCATCAGCATTTT+TGG + chr8_1:4377289-4377308 None:intergenic 25.0%
!! TGCTGATGGAAAAATTTTAT+AGG - chr8_1:4377293-4377312 Msa1173780:intron 25.0%
!! GCTGATGGAAAAATTTTATA+GGG - chr8_1:4377294-4377313 Msa1173780:intron 25.0%
!! ATGCTGATGGAAAATTTTAT+AGG - chr8_1:4377324-4377343 Msa1173780:intron 25.0%
!! TGCTGATGGAAAATTTTATA+GGG - chr8_1:4377325-4377344 Msa1173780:intron 25.0%
! TTCATCATAACATTTGCTTT+AGG - chr8_1:4377612-4377631 Msa1173780:intron 25.0%
! TTTAGGCATTAAAACATGTT+GGG - chr8_1:4377629-4377648 Msa1173780:intron 25.0%
! AAGTGTAGAATAATAGAAAG+GGG + chr8_1:4377760-4377779 None:intergenic 25.0%
! GAAGTGTAGAATAATAGAAA+GGG + chr8_1:4377761-4377780 None:intergenic 25.0%
!! AGAAGTGTAGAATAATAGAA+AGG + chr8_1:4377762-4377781 None:intergenic 25.0%
!!! ACTTTAAGGATATTTTTCCA+TGG + chr8_1:4377831-4377850 None:intergenic 25.0%
! ATCCTTAAAGTCATAAATGA+AGG - chr8_1:4377840-4377859 Msa1173780:CDS 25.0%
! TCCTTAAAGTCATAAATGAA+GGG - chr8_1:4377841-4377860 Msa1173780:CDS 25.0%
! TGTCCTAAAATTAACATCAA+AGG - chr8_1:4378033-4378052 Msa1173780:CDS 25.0%
!!! ATTGTGTATATTTTGATGAC+AGG - chr8_1:4378102-4378121 Msa1173780:CDS 25.0%
! ACTCTTAACATACACATATA+TGG - chr8_1:4378497-4378516 Msa1173780:intron 25.0%
! CTCTTAACATACACATATAT+GGG - chr8_1:4378498-4378517 Msa1173780:intron 25.0%
! TCTTAACATACACATATATG+GGG - chr8_1:4378499-4378518 Msa1173780:intron 25.0%
!!! TACCATGATTTTTTCATAAG+AGG - chr8_1:4378649-4378668 Msa1173780:intron 25.0%
! CATTTACTATTGTCTCTAAT+AGG + chr8_1:4378700-4378719 None:intergenic 25.0%
! ATTCCCTTAAAATATCTAAC+AGG - chr8_1:4378892-4378911 Msa1173780:intron 25.0%
!! TCACATGTCATTAATTTTTC+AGG + chr8_1:4379067-4379086 None:intergenic 25.0%
! ATTAATGACATGTGATGTAA+TGG - chr8_1:4379072-4379091 Msa1173780:intron 25.0%
! TTAATGACATGTGATGTAAT+GGG - chr8_1:4379073-4379092 Msa1173780:intron 25.0%
! TCTAAATCTAAAGGATCATA+TGG + chr8_1:4379175-4379194 None:intergenic 25.0%
! AAAAGCTAATTCAATAATGC+AGG - chr8_1:4379210-4379229 Msa1173780:CDS 25.0%
! AATAATGCAGGTAGAAATTT+GGG - chr8_1:4379222-4379241 Msa1173780:CDS 25.0%
! AAATTTGGGAAGATGAATAT+TGG - chr8_1:4371016-4371035 Msa1173780:CDS 25.0%
!!! AGTTCCTTTTTTTATCCTAA+AGG - chr8_1:4379368-4379387 Msa1173780:five_prime_UTR 25.0%
!!! TCATCCTTTAGGATAAAAAA+AGG + chr8_1:4379375-4379394 None:intergenic 25.0%
! ATATACACTTATCATCCTTT+AGG + chr8_1:4379386-4379405 None:intergenic 25.0%
!!! TTTGATAGTTGATAGACATT+TGG - chr8_1:4379433-4379452 Msa1173780:five_prime_UTR 25.0%
! GTATATATGAAAGAGAGTGT+TGG + chr8_1:4367130-4367149 None:intergenic 30.0%
!! CTCTAACTTTTGCTATATGA+GGG + chr8_1:4367181-4367200 None:intergenic 30.0%
!! TCTCTAACTTTTGCTATATG+AGG + chr8_1:4367182-4367201 None:intergenic 30.0%
ATTCAACTCAAACATGAACA+AGG - chr8_1:4367208-4367227 Msa1173780:three_prime_UTR 30.0%
ACATATCTTAAACTCTTCTG+GGG - chr8_1:4367239-4367258 Msa1173780:three_prime_UTR 30.0%
! TATTGTAACTTTAGCCTTCT+TGG + chr8_1:4367297-4367316 None:intergenic 30.0%
GAGTGATTCAAAATTCTACT+CGG + chr8_1:4367746-4367765 None:intergenic 30.0%
! TTCAAAATTTGTTCGAGTCA+TGG + chr8_1:4367814-4367833 None:intergenic 30.0%
ACAACACTAAACTAAGTGTT+TGG - chr8_1:4367954-4367973 Msa1173780:CDS 30.0%
TATGACATGATCATTGATCA+AGG + chr8_1:4368103-4368122 None:intergenic 30.0%
TAATGCTAATAGTTACAACG+CGG + chr8_1:4368136-4368155 None:intergenic 30.0%
!!! TGGATGAAAGGTTTTGATTT+GGG + chr8_1:4368271-4368290 None:intergenic 30.0%
!!! ATGGATGAAAGGTTTTGATT+TGG + chr8_1:4368272-4368291 None:intergenic 30.0%
!!! TTTCTCAGTTTTTTCTCCAT+TGG + chr8_1:4368342-4368361 None:intergenic 30.0%
! TTGTTGGGTTATGTTTTGTA+GGG + chr8_1:4368385-4368404 None:intergenic 30.0%
! TTTGTTGGGTTATGTTTTGT+AGG + chr8_1:4368386-4368405 None:intergenic 30.0%
! TCCATGAAGATTTAAAACCA+TGG - chr8_1:4368444-4368463 Msa1173780:intron 30.0%
!!! TCCATGGTTTTAAATCTTCA+TGG + chr8_1:4368448-4368467 None:intergenic 30.0%
TTAAAACCATGGAGAGAAAA+AGG - chr8_1:4368455-4368474 Msa1173780:intron 30.0%
TAAAACCATGGAGAGAAAAA+GGG - chr8_1:4368456-4368475 Msa1173780:intron 30.0%
AAGAGATGTGTTTACTTTGT+GGG - chr8_1:4368583-4368602 Msa1173780:CDS 30.0%
TCAAACATAAGTTCCAAATC+AGG + chr8_1:4368647-4368666 None:intergenic 30.0%
GAACAATATCTAAACAAAGG+TGG + chr8_1:4368728-4368747 None:intergenic 30.0%
TTTCAGTTCTTTGACTCATT+CGG - chr8_1:4368986-4369005 Msa1173780:intron 30.0%
!!! TTTTTTGCTTATAAGTTGGG+AGG - chr8_1:4369120-4369139 Msa1173780:intron 30.0%
!! TTTTTGCTTATAAGTTGGGA+GGG - chr8_1:4369121-4369140 Msa1173780:intron 30.0%
! ACAACATGGCATGATTTTAT+TGG + chr8_1:4369162-4369181 None:intergenic 30.0%
!!! TGCCATGTTGTCATTTTATT+AGG - chr8_1:4369171-4369190 Msa1173780:intron 30.0%
!! ACTTGCACACTATTTTAAAG+AGG + chr8_1:4369244-4369263 None:intergenic 30.0%
TTAAAATAGTGTGCAAGTGA+TGG - chr8_1:4369246-4369265 Msa1173780:intron 30.0%
AATTTGAAAAGATAAGAGCG+TGG + chr8_1:4369312-4369331 None:intergenic 30.0%
!!! TCTTTAAGGGTATTTTTCCA+TGG + chr8_1:4369610-4369629 None:intergenic 30.0%
ACCCTTAAAGAGATAAAAGA+AGG - chr8_1:4369619-4369638 Msa1173780:intron 30.0%
! CCCTTCTTTTATCTCTTTAA+GGG + chr8_1:4369623-4369642 None:intergenic 30.0%
CCCTTAAAGAGATAAAAGAA+GGG - chr8_1:4369620-4369639 Msa1173780:intron 30.0%
! TCCCTTCTTTTATCTCTTTA+AGG + chr8_1:4369624-4369643 None:intergenic 30.0%
ATGTAGCATTGCATTTCAAA+AGG + chr8_1:4369726-4369745 None:intergenic 30.0%
ATGCTACATCAAAAGATGAT+TGG - chr8_1:4369737-4369756 Msa1173780:intron 30.0%
GTTACAAGAAATCAAGCTTA+GGG - chr8_1:4369902-4369921 Msa1173780:intron 30.0%
!!! TTCTATGACTTTTTCATCAG+AGG - chr8_1:4370252-4370271 Msa1173780:intron 30.0%
!! TCTTAAATTTGCTGTGGATT+GGG - chr8_1:4370329-4370348 Msa1173780:intron 30.0%
TTCAGCGTAATTATATGTGT+TGG - chr8_1:4370517-4370536 Msa1173780:intron 30.0%
TTTAAACCAACTATACCTCA+AGG - chr8_1:4370811-4370830 Msa1173780:CDS 30.0%
AAAGTTAAAGGATCATATGG+AGG + chr8_1:4370952-4370971 None:intergenic 30.0%
AAAAGCTAATTCAACAAGAC+AGG - chr8_1:4370990-4371009 Msa1173780:CDS 30.0%
AACAAGACAGGTAGAAATTT+GGG - chr8_1:4371002-4371021 Msa1173780:CDS 30.0%
!!! TGGCTTAGTTGTTACTTTTT+TGG - chr8_1:4371065-4371084 Msa1173780:CDS 30.0%
TTATTGTCACACACATGTAT+CGG + chr8_1:4371260-4371279 None:intergenic 30.0%
AAGCTTAACCTTAATCCTTT+GGG + chr8_1:4371754-4371773 None:intergenic 30.0%
ACAAAGGAAAACAATGACAT+TGG - chr8_1:4371852-4371871 Msa1173780:intron 30.0%
CTTTAAATCAAGTGCAACAA+TGG + chr8_1:4371890-4371909 None:intergenic 30.0%
TTTGAAGAAAATGGAAGAAG+TGG - chr8_1:4371912-4371931 Msa1173780:intron 30.0%
! TTTTAGTGACTATGCTTATG+GGG + chr8_1:4371991-4372010 None:intergenic 30.0%
!!! ACTCAAATTGCTTTTTGAAG+AGG + chr8_1:4372088-4372107 None:intergenic 30.0%
TTGCTAAAACAGGGTAATTA+AGG - chr8_1:4372134-4372153 Msa1173780:intron 30.0%
AAACAGGGTAATTAAGGTTT+AGG - chr8_1:4372140-4372159 Msa1173780:intron 30.0%
! TCTATTGACTAAGTATACGT+TGG - chr8_1:4372226-4372245 Msa1173780:intron 30.0%
AGTAGTTAAGGAACATACAA+CGG - chr8_1:4372525-4372544 Msa1173780:intron 30.0%
TTGATTGAGTCTTAGCAATA+TGG - chr8_1:4372692-4372711 Msa1173780:intron 30.0%
ATTCTTGATGCTAATGATGA+TGG + chr8_1:4372723-4372742 None:intergenic 30.0%
ATCATTAGCATCAAGAATGT+CGG - chr8_1:4372725-4372744 Msa1173780:intron 30.0%
!! AATGTTTTTAAAGGCTCCTT+AGG + chr8_1:4372762-4372781 None:intergenic 30.0%
! AAGGAGCCTTTAAAAACATT+AGG - chr8_1:4372762-4372781 Msa1173780:intron 30.0%
!! GGCATTCCTAATGTTTTTAA+AGG + chr8_1:4372771-4372790 None:intergenic 30.0%
ATTAGGAATGCCAATATCAA+TGG - chr8_1:4372779-4372798 Msa1173780:intron 30.0%
TGAGACAGAAAATTGATATG+GGG - chr8_1:4372863-4372882 Msa1173780:intron 30.0%
!! CTAATTGTGTAGGTATTGAT+TGG + chr8_1:4373110-4373129 None:intergenic 30.0%
!! GTAAAAGGTACTAATTGTGT+AGG + chr8_1:4373120-4373139 None:intergenic 30.0%
TTAGCCATGACAAAAATACT+AGG + chr8_1:4373159-4373178 None:intergenic 30.0%
!! TTAGGTTATGTTTGGTTCTA+GGG - chr8_1:4373327-4373346 Msa1173780:intron 30.0%
GTGGATAGATTTACTTTCTA+TGG - chr8_1:4373377-4373396 Msa1173780:intron 30.0%
! AGAGGAAATAATCTTTTTGC+TGG - chr8_1:4373421-4373440 Msa1173780:intron 30.0%
! GAGGAAATAATCTTTTTGCT+GGG - chr8_1:4373422-4373441 Msa1173780:intron 30.0%
! GAAAGGATTTTGTAGTTGTT+TGG + chr8_1:4373798-4373817 None:intergenic 30.0%
TGTTTGGATCACAAAAGAAA+GGG + chr8_1:4373877-4373896 None:intergenic 30.0%
GTTTGGTCAATTATGTATTG+GGG + chr8_1:4373995-4374014 None:intergenic 30.0%
CAGTTTGGTCAATTATGTAT+TGG + chr8_1:4373997-4374016 None:intergenic 30.0%
GAAATGCAAATCGTAAATGA+TGG + chr8_1:4374042-4374061 None:intergenic 30.0%
GGTTCTGTCAAAAAAAGATT+TGG + chr8_1:4374178-4374197 None:intergenic 30.0%
TCGCTTCATAAAATTGTGTT+CGG + chr8_1:4374296-4374315 None:intergenic 30.0%
! CACAATTTTATGAAGCGAAA+CGG - chr8_1:4374298-4374317 Msa1173780:intron 30.0%
! ATAATCTTAAATTGGCGGAT+GGG + chr8_1:4374325-4374344 None:intergenic 30.0%
TATAATCTTAAATTGGCGGA+TGG + chr8_1:4374326-4374345 None:intergenic 30.0%
AGAAATGGACATTCAATACA+AGG + chr8_1:4374424-4374443 None:intergenic 30.0%
TCTGTCATTGTATTAACCAA+GGG + chr8_1:4374450-4374469 None:intergenic 30.0%
TGAGTATTATTGGATGCTTA+TGG + chr8_1:4374501-4374520 None:intergenic 30.0%
TTTAAACATGAAACATGACG+TGG - chr8_1:4374677-4374696 Msa1173780:intron 30.0%
CTATGGATGTACAATGAATA+TGG + chr8_1:4374704-4374723 None:intergenic 30.0%
ACATGAGAAACTCAAAAACT+TGG + chr8_1:4374737-4374756 None:intergenic 30.0%
! ACATATCTGAAACACTTCTA+TGG - chr8_1:4374804-4374823 Msa1173780:CDS 30.0%
AATTATGTTAAGCATGACCA+AGG - chr8_1:4375093-4375112 Msa1173780:intron 30.0%
TGACACCAAATTAGAACTAT+TGG - chr8_1:4375241-4375260 Msa1173780:intron 30.0%
! TTGTTGGGTTATGTTTTGTA+GGG + chr8_1:4368385-4368404 None:intergenic 30.0%
! TTTGTTGGGTTATGTTTTGT+AGG + chr8_1:4368386-4368405 None:intergenic 30.0%
TAAAACCATGGAGAGAAAAA+GGG - chr8_1:4368456-4368475 Msa1173780:intron 30.0%
! AGATGTATGTGGAAAAGTAT+AGG - chr8_1:4375696-4375715 Msa1173780:CDS 30.0%
AAGAGATGTGTTTACTTTGT+GGG - chr8_1:4368583-4368602 Msa1173780:CDS 30.0%
TCAAACATAAGTTCCAAATC+AGG + chr8_1:4368647-4368666 None:intergenic 30.0%
GAACAATATCTAAACAAAGG+AGG + chr8_1:4368728-4368747 None:intergenic 30.0%
TAGATATTGTCTTTCCAGAT+TGG - chr8_1:4375912-4375931 Msa1173780:intron 30.0%
ACTATGTTTAAATGTTGCGT+TGG - chr8_1:4376015-4376034 Msa1173780:intron 30.0%
AGACTAGACGAAATAGAATT+AGG - chr8_1:4376048-4376067 Msa1173780:intron 30.0%
GAAAATAAGCTTAGATGGTT+TGG - chr8_1:4376124-4376143 Msa1173780:intron 30.0%
GACCTCTAAATCATTTCTAA+TGG + chr8_1:4376257-4376276 None:intergenic 30.0%
! CAAGTCTTATCTCACTAAAT+AGG + chr8_1:4376346-4376365 None:intergenic 30.0%
CTATTTAGTGAGATAAGACT+TGG - chr8_1:4376344-4376363 Msa1173780:CDS 30.0%
CTACTCAATGAACCTAAAAA+AGG - chr8_1:4376556-4376575 Msa1173780:intron 30.0%
CTAGGTCATATATTAAGAGA+CGG + chr8_1:4376661-4376680 None:intergenic 30.0%
! CTAGGTTATTTAAAATGGGA+CGG - chr8_1:4376873-4376892 Msa1173780:CDS 30.0%
!! TTTTATAAGGAGAAAGGTAC+TGG - chr8_1:4376941-4376960 Msa1173780:intron 30.0%
!! TTTTAAGGGAGAACTAACTA+GGG + chr8_1:4377086-4377105 None:intergenic 30.0%
!! TTTTTAAGGGAGAACTAACT+AGG + chr8_1:4377087-4377106 None:intergenic 30.0%
!! ATTTTTATCAAAGTTGGCCT+TGG - chr8_1:4377433-4377452 Msa1173780:intron 30.0%
!!! TTTTTATCAAAGTTGGCCTT+GGG - chr8_1:4377434-4377453 Msa1173780:intron 30.0%
! GATGTTCTAGTTAGAGATTT+AGG - chr8_1:4377461-4377480 Msa1173780:intron 30.0%
CTTTAGGCATTAAAACATGT+TGG - chr8_1:4377628-4377647 Msa1173780:intron 30.0%
AGTGTAGAATAATAGAAAGG+GGG + chr8_1:4377759-4377778 None:intergenic 30.0%
TCCCTTCATTTATGACTTTA+AGG + chr8_1:4377845-4377864 None:intergenic 30.0%
! ATAGAGTACCTTATGCTTAT+TGG - chr8_1:4377886-4377905 Msa1173780:CDS 30.0%
ATGTAACATTGCATTGTAGA+AGG + chr8_1:4377947-4377966 None:intergenic 30.0%
GTTTCAACAAATCCAACTTA+GGG - chr8_1:4378149-4378168 Msa1173780:CDS 30.0%
TTTCAACAAATCCAACTTAG+GGG - chr8_1:4378150-4378169 Msa1173780:CDS 30.0%
GCAAAAATATCTTGAGTGAA+AGG - chr8_1:4378198-4378217 Msa1173780:CDS 30.0%
CTTAACATACACATATATGG+GGG - chr8_1:4378500-4378519 Msa1173780:intron 30.0%
AGGTACAAGATATACATAGA+AGG - chr8_1:4378556-4378575 Msa1173780:intron 30.0%
ACAAGATATACATAGAAGGA+TGG - chr8_1:4378560-4378579 Msa1173780:intron 30.0%
CAAGATATACATAGAAGGAT+GGG - chr8_1:4378561-4378580 Msa1173780:intron 30.0%
GGACTTTACATATAATGTCA+TGG + chr8_1:4378626-4378645 None:intergenic 30.0%
TGCCTCTTATGAAAAAATCA+TGG + chr8_1:4378654-4378673 None:intergenic 30.0%
!!! TGATTTTTTCATAAGAGGCA+TGG - chr8_1:4378654-4378673 Msa1173780:intron 30.0%
ATAGGCCAATAATGTTGTAA+GGG + chr8_1:4378682-4378701 None:intergenic 30.0%
AATAGGCCAATAATGTTGTA+AGG + chr8_1:4378683-4378702 None:intergenic 30.0%
!! TCTTAAATTTGCTGTGGAAT+GGG - chr8_1:4378726-4378745 Msa1173780:intron 30.0%
!! GTGCCTGTTAGATATTTTAA+GGG + chr8_1:4378898-4378917 None:intergenic 30.0%
! TGTGCCTGTTAGATATTTTA+AGG + chr8_1:4378899-4378918 None:intergenic 30.0%
AAATCTAAAGGATCATATGG+AGG + chr8_1:4379172-4379191 None:intergenic 30.0%
CAATAATGCAGGTAGAAATT+TGG - chr8_1:4379221-4379240 Msa1173780:CDS 30.0%
ATATTGGCAGAGTAAAAACA+AGG - chr8_1:4379252-4379271 Msa1173780:CDS 30.0%
TATTGGCAGAGTAAAAACAA+GGG - chr8_1:4379253-4379272 Msa1173780:CDS 30.0%
!!! TTGCTCTAAGATTTTATGAC+AGG - chr8_1:4379410-4379429 Msa1173780:five_prime_UTR 30.0%
!! TATGAAAGAGAGTGTTGGAA+GGG + chr8_1:4367125-4367144 None:intergenic 35.0%
!! ATATGAAAGAGAGTGTTGGA+AGG + chr8_1:4367126-4367145 None:intergenic 35.0%
TGCTGCAAAATCACAAAAAG+TGG + chr8_1:4367357-4367376 None:intergenic 35.0%
! CTTTTTGTGATTTTGCAGCA+TGG - chr8_1:4367357-4367376 Msa1173780:CDS 35.0%
! AAATTGAACCAAGGTGTTCT+TGG + chr8_1:4367685-4367704 None:intergenic 35.0%
CAATATCTCCTACACAAGAT+GGG + chr8_1:4367916-4367935 None:intergenic 35.0%
ACAATATCTCCTACACAAGA+TGG + chr8_1:4367917-4367936 None:intergenic 35.0%
!!! TGAAAGGTTTTGATTTGGGA+TGG + chr8_1:4368267-4368286 None:intergenic 35.0%
! CTTTGTGGTTTTTGCTTATG+TGG + chr8_1:4368295-4368314 None:intergenic 35.0%
GTGGAAATTCTTGTTCTTTG+TGG + chr8_1:4368310-4368329 None:intergenic 35.0%
! TGGATCCATCTAAAGTATGA+GGG + chr8_1:4368428-4368447 None:intergenic 35.0%
! ATGGATCCATCTAAAGTATG+AGG + chr8_1:4368429-4368448 None:intergenic 35.0%
ATCACTAGAGAAATGTTGGA+AGG - chr8_1:4368479-4368498 Msa1173780:intron 35.0%
! TTTAAGGTTGTGATTGTGGA+TGG - chr8_1:4368521-4368540 Msa1173780:intron 35.0%
TGTGGATGGAAAAATGTATG+TGG - chr8_1:4368535-4368554 Msa1173780:intron 35.0%
CAAGAGATGTGTTTACTTTG+TGG - chr8_1:4368582-4368601 Msa1173780:CDS 35.0%
AGAGATGTGTTTACTTTGTG+GGG - chr8_1:4368584-4368603 Msa1173780:CDS 35.0%
CAATTATTGAGAATGTACCC+TGG - chr8_1:4368614-4368633 Msa1173780:CDS 35.0%
AGATAGGCCTGTTATTCATA+AGG - chr8_1:4368673-4368692 Msa1173780:CDS 35.0%
CAATATCTAAACAAAGGTGG+TGG + chr8_1:4368725-4368744 None:intergenic 35.0%
! AACAAAAACGGAGTTTTTCC+CGG + chr8_1:4368968-4368987 None:intergenic 35.0%
!! TTTTATGTTGGAGGTGCAAA+AGG - chr8_1:4369085-4369104 Msa1173780:intron 35.0%
GTAGCTAGCCATTTATGTAA+TGG - chr8_1:4369338-4369357 Msa1173780:intron 35.0%
CAGAGACAAATATAAAGCCA+TGG - chr8_1:4369590-4369609 Msa1173780:intron 35.0%
! ATAGAGTACCTTATGCGTAT+TGG - chr8_1:4369665-4369684 Msa1173780:intron 35.0%
TTCCTTGCAATTCACATAGA+AGG - chr8_1:4369815-4369834 Msa1173780:intron 35.0%
TTCCTTCTATGTGAATTGCA+AGG + chr8_1:4369820-4369839 None:intergenic 35.0%
ATATGTTTGTGTCATAGGAC+TGG - chr8_1:4369860-4369879 Msa1173780:intron 35.0%
TATGTTTGTGTCATAGGACT+GGG - chr8_1:4369861-4369880 Msa1173780:intron 35.0%
TGATTTCTTGTAACCTTGAG+TGG + chr8_1:4369896-4369915 None:intergenic 35.0%
GGTTACAAGAAATCAAGCTT+AGG - chr8_1:4369901-4369920 Msa1173780:intron 35.0%
!! TGTAACTTGGACTTTTGAGA+TGG - chr8_1:4369986-4370005 Msa1173780:intron 35.0%
TTTATGTGCATTGTTGGAAC+AGG - chr8_1:4370139-4370158 Msa1173780:intron 35.0%
! TTTATATAGAAGGATGGGCT+TGG - chr8_1:4370169-4370188 Msa1173780:intron 35.0%
GGGTCTAACATATAATGTCA+TGG + chr8_1:4370229-4370248 None:intergenic 35.0%
TGGATCCATTACAACACTAT+TGG - chr8_1:4370277-4370296 Msa1173780:intron 35.0%
ATTGGCCAATAGTGTTGTAA+TGG + chr8_1:4370285-4370304 None:intergenic 35.0%
TACAACACTATTGGCCAATT+AGG - chr8_1:4370286-4370305 Msa1173780:intron 35.0%
ACAACACTATTGGCCAATTA+GGG - chr8_1:4370287-4370306 Msa1173780:intron 35.0%
ATCCACAGCAAATTTAAGAG+AGG + chr8_1:4370328-4370347 None:intergenic 35.0%
!! CTCTTAAATTTGCTGTGGAT+TGG - chr8_1:4370328-4370347 Msa1173780:intron 35.0%
!! CTTAAATTTGCTGTGGATTG+GGG - chr8_1:4370330-4370349 Msa1173780:intron 35.0%
ATTCCCTAAAATGGCATATC+AGG - chr8_1:4370678-4370697 Msa1173780:CDS 35.0%
TGCTAGCAAATTCATACAAG+AGG - chr8_1:4370720-4370739 Msa1173780:CDS 35.0%
ACAATGGCATGTGATGTAAT+TGG - chr8_1:4370856-4370875 Msa1173780:CDS 35.0%
GTGATGTAATTGGTACACAA+AGG - chr8_1:4370866-4370885 Msa1173780:CDS 35.0%
TGGTACACAAAGGAAATTCA+TGG - chr8_1:4370876-4370895 Msa1173780:CDS 35.0%
TACACAAAGGAAATTCATGG+AGG - chr8_1:4370879-4370898 Msa1173780:CDS 35.0%
GTGCATGGATTTAAATCACT+AGG + chr8_1:4370922-4370941 None:intergenic 35.0%
CAACAAGACAGGTAGAAATT+TGG - chr8_1:4371001-4371020 Msa1173780:CDS 35.0%
GCATAAAAAGGAGTGGATAT+GGG + chr8_1:4371284-4371303 None:intergenic 35.0%
TGCATAAAAAGGAGTGGATA+TGG + chr8_1:4371285-4371304 None:intergenic 35.0%
CTTCAAATCAAGTGTAGCAT+TGG - chr8_1:4371578-4371597 Msa1173780:intron 35.0%
! GAAAATCTTGAAGGCTAGTT+TGG - chr8_1:4371635-4371654 Msa1173780:intron 35.0%
TATGATTGCCCAAAGGATTA+AGG - chr8_1:4371743-4371762 Msa1173780:intron 35.0%
GAAGCTTAACCTTAATCCTT+TGG + chr8_1:4371755-4371774 None:intergenic 35.0%
ATTACTGACATACCTCTTCT+TGG + chr8_1:4371780-4371799 None:intergenic 35.0%
AATGTGATGGTTGCTAAAAC+AGG - chr8_1:4372124-4372143 Msa1173780:intron 35.0%
ATGTGATGGTTGCTAAAACA+GGG - chr8_1:4372125-4372144 Msa1173780:intron 35.0%
CTCTCAACTAATGGAATGTT+AGG - chr8_1:4372171-4372190 Msa1173780:intron 35.0%
TCAAAGAACATGGCATACAA+TGG + chr8_1:4372384-4372403 None:intergenic 35.0%
TTCCTACTAGTCAAAGAACA+TGG + chr8_1:4372394-4372413 None:intergenic 35.0%
TTACCAAGTGATTAGAACTG+AGG + chr8_1:4372567-4372586 None:intergenic 35.0%
TAAAGGTTGTATTGTCCTAC+CGG + chr8_1:4372614-4372633 None:intergenic 35.0%
ATCATTACTCTTGGAGCTTT+AGG + chr8_1:4372843-4372862 None:intergenic 35.0%
TCTGTCTCAATCATTACTCT+TGG + chr8_1:4372852-4372871 None:intergenic 35.0%
TAGCAACGTCTTTCATATCT+TGG + chr8_1:4373044-4373063 None:intergenic 35.0%
CATGACAAAAATACTAGGCT+AGG + chr8_1:4373154-4373173 None:intergenic 35.0%
!! CTAGCCTAGTATTTTTGTCA+TGG - chr8_1:4373152-4373171 Msa1173780:intron 35.0%
! ATTTTTGTCATGGCTAACCA+TGG - chr8_1:4373162-4373181 Msa1173780:intron 35.0%
! TTTTTGTCATGGCTAACCAT+GGG - chr8_1:4373163-4373182 Msa1173780:intron 35.0%
!! CTTAGACTTGAAGAGTATCA+TGG + chr8_1:4373219-4373238 None:intergenic 35.0%
CTAGAACCAAACATAACCTA+AGG + chr8_1:4373328-4373347 None:intergenic 35.0%
!! CTTAGGTTATGTTTGGTTCT+AGG - chr8_1:4373326-4373345 Msa1173780:intron 35.0%
! TTCTAGGGAAAGATTGAAAG+TGG - chr8_1:4373342-4373361 Msa1173780:intron 35.0%
TCTAGGGAAAGATTGAAAGT+GGG - chr8_1:4373343-4373362 Msa1173780:intron 35.0%
GAAAGTGAATGGAAAGTGAA+AGG + chr8_1:4373815-4373834 None:intergenic 35.0%
GTGTTTGGATCACAAAAGAA+AGG + chr8_1:4373878-4373897 None:intergenic 35.0%
! AAACACACCCTTAAGGTTTT+GGG - chr8_1:4373892-4373911 Msa1173780:intron 35.0%
AATGAGGACAATAATGCTCT+AGG + chr8_1:4373948-4373967 None:intergenic 35.0%
GATCATTTGTTTACGCAGTT+TGG + chr8_1:4374012-4374031 None:intergenic 35.0%
TGAATTCTAGATCATATGCG+TGG - chr8_1:4374138-4374157 Msa1173780:intron 35.0%
! TAATCTTAAATTGGCGGATG+GGG + chr8_1:4374324-4374343 None:intergenic 35.0%
TCAATACAAGGACAGATTTG+TGG + chr8_1:4374412-4374431 None:intergenic 35.0%
ATTAACCAAGGGTTGAGAAA+TGG + chr8_1:4374439-4374458 None:intergenic 35.0%
CTCTGTCATTGTATTAACCA+AGG + chr8_1:4374451-4374470 None:intergenic 35.0%
!! TCAAGTTGAATCCTCCTATA+AGG + chr8_1:4374772-4374791 None:intergenic 35.0%
! TATCTGAAACACTTCTATGG+CGG - chr8_1:4374807-4374826 Msa1173780:CDS 35.0%
!! GCAAGTAACTTTAGCTTTCT+TGG + chr8_1:4374862-4374881 None:intergenic 35.0%
AGCTAAAGTTACTTGCTTAG+TGG - chr8_1:4374866-4374885 Msa1173780:CDS 35.0%
GAAGAAAATCTTCTTGGTCT+TGG + chr8_1:4375463-4375482 None:intergenic 35.0%
! CATGGTTGTTGAGATTTGTT+GGG + chr8_1:4375550-4375569 None:intergenic 35.0%
ACATGGTTGTTGAGATTTGT+TGG + chr8_1:4375551-4375570 None:intergenic 35.0%
TAAAGTATGAGGGACAAACA+TGG + chr8_1:4375568-4375587 None:intergenic 35.0%
TTTGTCCCTCATACTTTAGA+TGG - chr8_1:4375570-4375589 Msa1173780:CDS 35.0%
! TGGATCCATCTAAAGTATGA+GGG + chr8_1:4368428-4368447 None:intergenic 35.0%
! ATGGATCCATCTAAAGTATG+AGG + chr8_1:4368429-4368448 None:intergenic 35.0%
! TCCATGAAGATCTAAAACCA+TGG - chr8_1:4375594-4375613 Msa1173780:CDS 35.0%
!!! TCCATGGTTTTAGATCTTCA+TGG + chr8_1:4375598-4375617 None:intergenic 35.0%
CTAAAACCATGGAGAGAAAA+AGG - chr8_1:4375605-4375624 Msa1173780:CDS 35.0%
ACATGTTGCAAAAGGCAAAA+AGG - chr8_1:4375639-4375658 Msa1173780:CDS 35.0%
ACATTTCAAGCTTGTGATTG+TGG - chr8_1:4375667-4375686 Msa1173780:CDS 35.0%
CAAGAGATGTGTTTACTTTG+TGG - chr8_1:4368582-4368601 Msa1173780:CDS 35.0%
AGAGATGTGTTTACTTTGTG+GGG - chr8_1:4368584-4368603 Msa1173780:CDS 35.0%
CAATTATTGAGAATGTACCC+TGG - chr8_1:4368614-4368633 Msa1173780:CDS 35.0%
AACTTATCCAAAGGAACAAC+AGG + chr8_1:4375833-4375852 None:intergenic 35.0%
GTTCCTTTGGATAAGTTTCA+AGG - chr8_1:4375836-4375855 Msa1173780:intron 35.0%
CAATATCTAAACAAAGGAGG+CGG + chr8_1:4375875-4375894 None:intergenic 35.0%
ATGCACCATTAAAGAGATAG+TGG - chr8_1:4376072-4376091 Msa1173780:intron 35.0%
TGCACCATTAAAGAGATAGT+GGG - chr8_1:4376073-4376092 Msa1173780:intron 35.0%
CGTAAGAAAAGTAGATCAGA+TGG - chr8_1:4376177-4376196 Msa1173780:CDS 35.0%
AAGAAAAGTAGATCAGATGG+AGG - chr8_1:4376180-4376199 Msa1173780:CDS 35.0%
TGATTTAGAGGTCAATGAGT+TGG - chr8_1:4376264-4376283 Msa1173780:CDS 35.0%
CTTATCTCACTAAATAGGGT+TGG + chr8_1:4376341-4376360 None:intergenic 35.0%
! TTCTTATATTTGAGACCGGA+GGG + chr8_1:4376585-4376604 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + chr8_1:4376584-4376603 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr8_1:4376584-4376603 Msa1173780:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr8_1:4376585-4376604 Msa1173780:intron 35.0%
GTCATATATTAAGAGACGGA+GGG + chr8_1:4376657-4376676 None:intergenic 35.0%
! GTTATTTAAAATGGGACGGA+GGG - chr8_1:4376877-4376896 Msa1173780:CDS 35.0%
TTCTCCCTTAAAAAAGCTCT+AGG - chr8_1:4377093-4377112 Msa1173780:intron 35.0%
!!! TCCACCTAGAGCTTTTTTAA+GGG + chr8_1:4377100-4377119 None:intergenic 35.0%
!!! ATCCACCTAGAGCTTTTTTA+AGG + chr8_1:4377101-4377120 None:intergenic 35.0%
TTTAGGGACCAAAATGTTGA+TGG - chr8_1:4377247-4377266 Msa1173780:intron 35.0%
! TGTTGATGGAAATCTTTGAC+AGG - chr8_1:4377261-4377280 Msa1173780:intron 35.0%
! GTTGATGGAAATCTTTGACA+GGG - chr8_1:4377262-4377281 Msa1173780:intron 35.0%
ATAGGGACTAAAAATGCTGA+TGG - chr8_1:4377311-4377330 Msa1173780:intron 35.0%
CAGAGACAAATATAAAGCCA+TGG - chr8_1:4369590-4369609 Msa1173780:intron 35.0%
AGTACCTTATGCTTATTGGA+AGG - chr8_1:4377890-4377909 Msa1173780:CDS 35.0%
GTACCTTATGCTTATTGGAA+GGG - chr8_1:4377891-4377910 Msa1173780:CDS 35.0%
TACCTTATGCTTATTGGAAG+GGG - chr8_1:4377892-4377911 Msa1173780:CDS 35.0%
!! TGTAGAAGGTTTTGTCTAGT+TGG + chr8_1:4377933-4377952 None:intergenic 35.0%
GAACACTCTCATATACATAC+AGG - chr8_1:4377980-4377999 Msa1173780:CDS 35.0%
!!! GTATATTTTGATGACAGGAC+TGG - chr8_1:4378107-4378126 Msa1173780:CDS 35.0%
TGGATACAAGAATCCAATCA+AGG - chr8_1:4378127-4378146 Msa1173780:CDS 35.0%
!! GGATTTGTTGAAACCTTGAT+TGG + chr8_1:4378143-4378162 None:intergenic 35.0%
GGTTTCAACAAATCCAACTT+AGG - chr8_1:4378148-4378167 Msa1173780:CDS 35.0%
! TTTTAACATGCGCGTCAAAT+TGG + chr8_1:4378415-4378434 None:intergenic 35.0%
!!! ATTTGGTTTTGACATGTCAC+AGG - chr8_1:4378536-4378555 Msa1173780:intron 35.0%
TGGTTCCCTTACAACATTAT+TGG - chr8_1:4378674-4378693 Msa1173780:intron 35.0%
TTCCACAGCAAATTTAAGAG+AGG + chr8_1:4378725-4378744 None:intergenic 35.0%
!! CTCTTAAATTTGCTGTGGAA+TGG - chr8_1:4378725-4378744 Msa1173780:intron 35.0%
!! CTTAAATTTGCTGTGGAATG+GGG - chr8_1:4378727-4378746 Msa1173780:intron 35.0%
TCTTGCTCATTTGAAGAATG+TGG + chr8_1:4378792-4378811 None:intergenic 35.0%
TGGTAGCAAATTCATACAAG+AGG - chr8_1:4378934-4378953 Msa1173780:intron 35.0%
TTCAAACCAACTATACCTAG+AGG - chr8_1:4379025-4379044 Msa1173780:intron 35.0%
!! ATGTAATGGGTGGTAACAAA+AGG - chr8_1:4379086-4379105 Msa1173780:intron 35.0%
! TATCTTAAACTCTTCTGGGG+TGG - chr8_1:4367242-4367261 Msa1173780:three_prime_UTR 40.0%
GAGATGTTTCTTCACCAAGA+AGG - chr8_1:4367280-4367299 Msa1173780:CDS 40.0%
ACAAAACAAACCAACCACAG+TGG + chr8_1:4367327-4367346 None:intergenic 40.0%
ACCATGGTAGAAAAATCACG+TGG - chr8_1:4367623-4367642 Msa1173780:intron 40.0%
! ACCACGTGATTTTTCTACCA+TGG + chr8_1:4367627-4367646 None:intergenic 40.0%
GGATGTTGAAGCATAGGATT+AGG + chr8_1:4367982-4368001 None:intergenic 40.0%
TGCTTATGTGGATGGATGAA+AGG + chr8_1:4368283-4368302 None:intergenic 40.0%
! GTGGTTTTTGCTTATGTGGA+TGG + chr8_1:4368291-4368310 None:intergenic 40.0%
TTTCCACTTAGATGCACCAA+TGG - chr8_1:4368323-4368342 Msa1173780:intron 40.0%
! TGTTTTGTAGGGTAGTCTCT+TGG + chr8_1:4368374-4368393 None:intergenic 40.0%
CTTGTCCCTCATACTTTAGA+TGG - chr8_1:4368420-4368439 Msa1173780:intron 40.0%
AGGGATCACTAGAGAAATGT+TGG - chr8_1:4368475-4368494 Msa1173780:intron 40.0%
TTGTTCAGATCAATGGAGCT+TGG - chr8_1:4368742-4368761 Msa1173780:intron 40.0%
TGGATATTGTGTTCCCAGAT+TGG - chr8_1:4368762-4368781 Msa1173780:intron 40.0%
TAGTACTTACCATCCCCAAA+AGG + chr8_1:4368789-4368808 None:intergenic 40.0%
GCTCTTGAGATGGGTAAATA+CGG + chr8_1:4369032-4369051 None:intergenic 40.0%
AAATAGTGTGCAAGTGATGG+TGG - chr8_1:4369249-4369268 Msa1173780:intron 40.0%
! AAAGATAAGAGCGTGGAACT+TGG + chr8_1:4369305-4369324 None:intergenic 40.0%
AGTACCTTATGCGTATTGGA+AGG - chr8_1:4369669-4369688 Msa1173780:intron 40.0%
GTACCTTATGCGTATTGGAA+GGG - chr8_1:4369670-4369689 Msa1173780:intron 40.0%
TACCTTATGCGTATTGGAAG+GGG - chr8_1:4369671-4369690 Msa1173780:intron 40.0%
TCCTAGTTGCAGCAACATTA+GGG + chr8_1:4369699-4369718 None:intergenic 40.0%
TTCCTAGTTGCAGCAACATT+AGG + chr8_1:4369700-4369719 None:intergenic 40.0%
TGGGATAAAGAATCCACTCA+AGG - chr8_1:4369880-4369899 Msa1173780:intron 40.0%
!!! TGACTTTTTCATCAGAGGCA+TGG - chr8_1:4370257-4370276 Msa1173780:intron 40.0%
!! CACCTCTCTTAAATTTGCTG+TGG - chr8_1:4370323-4370342 Msa1173780:intron 40.0%
GGGAAACAAACATGCTGATA+AGG - chr8_1:4370350-4370369 Msa1173780:intron 40.0%
CTAGCTATGAAGCACGAATA+CGG - chr8_1:4370425-4370444 Msa1173780:intron 40.0%
TATGAAACACAGACACTCCT+CGG + chr8_1:4370600-4370619 None:intergenic 40.0%
!!! GTGCCTGATATGCCATTTTA+GGG + chr8_1:4370684-4370703 None:intergenic 40.0%
!!! TGTGCCTGATATGCCATTTT+AGG + chr8_1:4370685-4370704 None:intergenic 40.0%
CATATCAGGCACAAGCAATA+GGG - chr8_1:4370692-4370711 Msa1173780:CDS 40.0%
ATATCAGGCACAAGCAATAG+GGG - chr8_1:4370693-4370712 Msa1173780:CDS 40.0%
! GGAGTTTTGCTCAGAAACAA+TGG - chr8_1:4370840-4370859 Msa1173780:CDS 40.0%
GAAATTCATGGAGGAGTCAA+TGG - chr8_1:4370888-4370907 Msa1173780:CDS 40.0%
GTTAAAGGATCATATGGAGG+AGG + chr8_1:4370949-4370968 None:intergenic 40.0%
TGCTTCTGCATAAAAAGGAG+TGG + chr8_1:4371291-4371310 None:intergenic 40.0%
GGGTAATTAAGGTTTAGGCT+AGG - chr8_1:4372145-4372164 Msa1173780:intron 40.0%
GCTAGGAATCTCTCAACTAA+TGG - chr8_1:4372162-4372181 Msa1173780:intron 40.0%
ACTAATGGAATGTTAGGCGA+AGG - chr8_1:4372177-4372196 Msa1173780:intron 40.0%
!! CTAAGTATACGTTGGTCTTG+AGG - chr8_1:4372234-4372253 Msa1173780:intron 40.0%
TGCCATGTTCTTTGACTAGT+AGG - chr8_1:4372389-4372408 Msa1173780:intron 40.0%
AGTTAAGGAACATACAACGG+AGG - chr8_1:4372528-4372547 Msa1173780:intron 40.0%
CAAGTGATTAGAACTGAGGA+AGG + chr8_1:4372563-4372582 None:intergenic 40.0%
! CTTCCTCAGTTCTAATCACT+TGG - chr8_1:4372561-4372580 Msa1173780:intron 40.0%
GGAATCATAGTTGACACATC+CGG - chr8_1:4372592-4372611 Msa1173780:intron 40.0%
TCAGGTCAAGACTATGTTTG+TGG - chr8_1:4372654-4372673 Msa1173780:intron 40.0%
AAGGCTCCTTAGGTAATTGT+TGG + chr8_1:4372752-4372771 None:intergenic 40.0%
CTAAGAGGAGCCATTGATAT+TGG + chr8_1:4372792-4372811 None:intergenic 40.0%
! GCTTTAGGTGGATCAACTAA+TGG + chr8_1:4372828-4372847 None:intergenic 40.0%
!! ATTACTCTTGGAGCTTTAGG+TGG + chr8_1:4372840-4372859 None:intergenic 40.0%
TAAGCCCAAGGTTCATAATG+AGG - chr8_1:4372933-4372952 Msa1173780:intron 40.0%
TGAGCCTCATTATGAACCTT+GGG + chr8_1:4372940-4372959 None:intergenic 40.0%
TTGAGCCTCATTATGAACCT+TGG + chr8_1:4372941-4372960 None:intergenic 40.0%
TCAACAAGTCGAAAAGTTGG+CGG - chr8_1:4372957-4372976 Msa1173780:intron 40.0%
GTCACCATAATATGCTTGTC+TGG + chr8_1:4372983-4373002 None:intergenic 40.0%
! TGGTTACTTTGAACTCCTTG+TGG + chr8_1:4373024-4373043 None:intergenic 40.0%
AAGTCAGTCGATCATTGCAT+CGG - chr8_1:4373068-4373087 Msa1173780:intron 40.0%
! TTTTGTCATGGCTAACCATG+GGG - chr8_1:4373164-4373183 Msa1173780:intron 40.0%
ACTCATATACCTAGTGCCTT+AGG - chr8_1:4373309-4373328 Msa1173780:intron 40.0%
! CAAACATAACCTAAGGCACT+AGG + chr8_1:4373321-4373340 None:intergenic 40.0%
CTAGTGCCTTAGGTTATGTT+TGG - chr8_1:4373319-4373338 Msa1173780:intron 40.0%
AAAGTGGGAAAGAAAGTGAG+TGG - chr8_1:4373358-4373377 Msa1173780:intron 40.0%
! CAAAACCTTAAGGGTGTGTT+TGG + chr8_1:4373893-4373912 None:intergenic 40.0%
! CAAACACACCCTTAAGGTTT+TGG - chr8_1:4373891-4373910 Msa1173780:intron 40.0%
! AACACACCCTTAAGGTTTTG+GGG - chr8_1:4373893-4373912 Msa1173780:intron 40.0%
TATGTATTGGGGAGCAGTAA+GGG + chr8_1:4373984-4374003 None:intergenic 40.0%
TTATGTATTGGGGAGCAGTA+AGG + chr8_1:4373985-4374004 None:intergenic 40.0%
ATACAACCGAGATCTATCAC+TGG - chr8_1:4374343-4374362 Msa1173780:intron 40.0%
TACAACCGAGATCTATCACT+GGG - chr8_1:4374344-4374363 Msa1173780:intron 40.0%
AATGTCCATTTCTCAACCCT+TGG - chr8_1:4374431-4374450 Msa1173780:intron 40.0%
TTGTTGATGTGATCTACAGC+TGG + chr8_1:4374584-4374603 None:intergenic 40.0%
AACTCAAAAACTTGGAGCAG+AGG + chr8_1:4374729-4374748 None:intergenic 40.0%
GTCTGCAACAAGTTCCTTAT+AGG - chr8_1:4374755-4374774 Msa1173780:intron 40.0%
TGCAACAAGTTCCTTATAGG+AGG - chr8_1:4374758-4374777 Msa1173780:intron 40.0%
!! CTTTTTGTGCTTTTGCTGTC+TGG - chr8_1:4374892-4374911 Msa1173780:intron 40.0%
! GGAAGGAGCTAGTCTAATAT+TGG - chr8_1:4375307-4375326 Msa1173780:intron 40.0%
AGTCTGTCTTTGTGGATGAA+TGG + chr8_1:4375440-4375459 None:intergenic 40.0%
! TGTTTTGTAGGGTAGTCTCT+TGG + chr8_1:4368374-4368393 None:intergenic 40.0%
CACAAGGAACATGTTGCAAA+AGG - chr8_1:4375631-4375650 Msa1173780:CDS 40.0%
TTCAAGCTTGTGATTGTGGA+TGG - chr8_1:4375671-4375690 Msa1173780:CDS 40.0%
TGTGGATGGAAAGATGTATG+TGG - chr8_1:4375685-4375704 Msa1173780:CDS 40.0%
AGATAAGCCTGTTGTTCCTT+TGG - chr8_1:4375823-4375842 Msa1173780:intron 40.0%
GGTCCTTGAAACTTATCCAA+AGG + chr8_1:4375842-4375861 None:intergenic 40.0%
!! TCTTTCCAGATTGGTCCTTT+TGG - chr8_1:4375921-4375940 Msa1173780:intron 40.0%
!! CTTTCCAGATTGGTCCTTTT+GGG - chr8_1:4375922-4375941 Msa1173780:intron 40.0%
!! TTTCCAGATTGGTCCTTTTG+GGG - chr8_1:4375923-4375942 Msa1173780:intron 40.0%
TAAATGTTGCGTTGGATGAG+TGG - chr8_1:4376023-4376042 Msa1173780:intron 40.0%
GCACCATTAAAGAGATAGTG+GGG - chr8_1:4376074-4376093 Msa1173780:intron 40.0%
! CACCATTAAAGAGATAGTGG+GGG - chr8_1:4376075-4376094 Msa1173780:intron 40.0%
TACCCCCACTATCTCTTTAA+TGG + chr8_1:4376080-4376099 None:intergenic 40.0%
GGTCATATATTAAGAGACGG+AGG + chr8_1:4376658-4376677 None:intergenic 40.0%
! GGTTATTTAAAATGGGACGG+AGG - chr8_1:4376876-4376895 Msa1173780:CDS 40.0%
!! TATAAGGAGAAAGGTACTGG+TGG - chr8_1:4376944-4376963 Msa1173780:intron 40.0%
!!! GTACTGGTGGTCTTTTTTAG+AGG - chr8_1:4376957-4376976 Msa1173780:intron 40.0%
ATCAAGACCTGCATTTGTCA+AGG + chr8_1:4376998-4377017 None:intergenic 40.0%
!! TCCCTTAAAAAAGCTCTAGG+TGG - chr8_1:4377096-4377115 Msa1173780:intron 40.0%
AAGGGAACAAAAAGACCAAG+TGG - chr8_1:4377859-4377878 Msa1173780:CDS 40.0%
GAACAAAAAGACCAAGTGGA+AGG - chr8_1:4377863-4377882 Msa1173780:CDS 40.0%
TTCCCCTTCCAATAAGCATA+AGG + chr8_1:4377897-4377916 None:intergenic 40.0%
GTCTAGTTGGAGCAACATAA+GGG + chr8_1:4377920-4377939 None:intergenic 40.0%
TGTCTAGTTGGAGCAACATA+AGG + chr8_1:4377921-4377940 None:intergenic 40.0%
TCACCTACCTATGAGTACAT+TGG + chr8_1:4378177-4378196 None:intergenic 40.0%
GGGGCATAGAATGATACATT+TGG - chr8_1:4378519-4378538 Msa1173780:intron 40.0%
! TATACATAGAAGGATGGGCT+TGG - chr8_1:4378566-4378585 Msa1173780:intron 40.0%
!! CACCTCTCTTAAATTTGCTG+TGG - chr8_1:4370323-4370342 Msa1173780:intron 40.0%
ATCTAACAGGCACAGTCAAT+AGG - chr8_1:4378905-4378924 Msa1173780:intron 40.0%
! ATGACATGTGATGTAATGGG+TGG - chr8_1:4379076-4379095 Msa1173780:intron 40.0%
! TAATGGGTGGTAACAAAAGG+AGG - chr8_1:4379089-4379108 Msa1173780:intron 40.0%
TGGTAACAAAAGGAGGTTCA+TGG - chr8_1:4379096-4379115 Msa1173780:intron 40.0%
TCTAAAGGATCATATGGAGG+AGG + chr8_1:4379169-4379188 None:intergenic 40.0%
GAAGGGAGAGAGAATGAACA+TGG + chr8_1:4367108-4367127 None:intergenic 45.0%
TACAATAGCTACCACCACTG+TGG - chr8_1:4367310-4367329 Msa1173780:CDS 45.0%
AAACAAACCAACCACAGTGG+TGG + chr8_1:4367324-4367343 None:intergenic 45.0%
TTTGTGCACCCATCTTGTGT+AGG - chr8_1:4367905-4367924 Msa1173780:CDS 45.0%
GTGTTGGGATGTTGAAGCAT+AGG + chr8_1:4367988-4368007 None:intergenic 45.0%
TCTCCATTGGTGCATCTAAG+TGG + chr8_1:4368329-4368348 None:intergenic 45.0%
! GTGATCCCTTTTTCTCTCCA+TGG + chr8_1:4368464-4368483 None:intergenic 45.0%
! AAAGGTGGTGGTGAAGCATT+TGG + chr8_1:4368713-4368732 None:intergenic 45.0%
!! TGTTCCCAGATTGGTCCTTT+TGG - chr8_1:4368771-4368790 Msa1173780:intron 45.0%
!! GTTCCCAGATTGGTCCTTTT+GGG - chr8_1:4368772-4368791 Msa1173780:intron 45.0%
!! TTCCCAGATTGGTCCTTTTG+GGG - chr8_1:4368773-4368792 Msa1173780:intron 45.0%
ATCCCCAAAAGGACCAATCT+GGG + chr8_1:4368778-4368797 None:intergenic 45.0%
! AAACGGAGTTTTTCCCGGTA+CGG + chr8_1:4368963-4368982 None:intergenic 45.0%
! TACCCATCTCAAGAGCATGT+TGG - chr8_1:4369036-4369055 Msa1173780:intron 45.0%
CTCCAACATGCTCTTGAGAT+GGG + chr8_1:4369041-4369060 None:intergenic 45.0%
! TGCTTATAAGTTGGGAGGGA+TGG - chr8_1:4369125-4369144 Msa1173780:intron 45.0%
TATCCTTCCACTTGGTCTGT+TGG + chr8_1:4369648-4369667 None:intergenic 45.0%
AGGTACTCTATCCTTCCACT+TGG + chr8_1:4369656-4369675 None:intergenic 45.0%
TTCCCCTTCCAATACGCATA+AGG + chr8_1:4369676-4369695 None:intergenic 45.0%
ACCCTAATGTTGCTGCAACT+AGG - chr8_1:4369695-4369714 Msa1173780:intron 45.0%
TAGGGAATCAATGCACCCAT+AGG - chr8_1:4369920-4369939 Msa1173780:intron 45.0%
CATGAACACCAGACATGACA+CGG - chr8_1:4370449-4370468 Msa1173780:intron 45.0%
GCATATCAGGCACAAGCAAT+AGG - chr8_1:4370691-4370710 Msa1173780:CDS 45.0%
ACAGCTCCTTGAGGTATAGT+TGG + chr8_1:4370820-4370839 None:intergenic 45.0%
AACTATACCTCAAGGAGCTG+TGG - chr8_1:4370819-4370838 Msa1173780:CDS 45.0%
TATGGAGGAGGAATAGTGCA+TGG + chr8_1:4370937-4370956 None:intergenic 45.0%
! GCTAGTTTGGACAACGTAGA+GGG - chr8_1:4371648-4371667 Msa1173780:intron 45.0%
CGTTGCTTATGATTGCCCAA+AGG - chr8_1:4371736-4371755 Msa1173780:intron 45.0%
GTTAAGCTTCCTCCAAGAAG+AGG - chr8_1:4371765-4371784 Msa1173780:intron 45.0%
ACTGACATACCTCTTCTTGG+AGG + chr8_1:4371777-4371796 None:intergenic 45.0%
GTGCATGAGAGGGAGAAAAT+TGG - chr8_1:4371934-4371953 Msa1173780:intron 45.0%
GAGAAAATTGGCGAGAGAGA+GGG - chr8_1:4371946-4371965 Msa1173780:intron 45.0%
AACGCAAAGAGCGATGAGAA+AGG - chr8_1:4372325-4372344 Msa1173780:intron 45.0%
! GAGAAAGGAAGCATGCTCAT+AGG - chr8_1:4372340-4372359 Msa1173780:intron 45.0%
CATAGGAGAGTTGCACACTA+AGG - chr8_1:4372357-4372376 Msa1173780:intron 45.0%
TCATAGTTGACACATCCGGT+AGG - chr8_1:4372596-4372615 Msa1173780:intron 45.0%
GTCGGACCAACAATTACCTA+AGG - chr8_1:4372743-4372762 Msa1173780:intron 45.0%
TGCTGACATTGTTAAGCCCA+AGG - chr8_1:4372921-4372940 Msa1173780:intron 45.0%
GGCTCAACAAGTCGAAAAGT+TGG - chr8_1:4372954-4372973 Msa1173780:intron 45.0%
TTCATGACCAACACACCACA+AGG - chr8_1:4373006-4373025 Msa1173780:intron 45.0%
TTGAACTCCTTGTGGTGTGT+TGG + chr8_1:4373016-4373035 None:intergenic 45.0%
TTTGTCATGGCTAACCATGG+GGG - chr8_1:4373165-4373184 Msa1173780:intron 45.0%
TATGTCTCATTCACGCCACT+AGG + chr8_1:4373193-4373212 None:intergenic 45.0%
! GGTTTGGAACTACTGCAAAG+AGG - chr8_1:4373398-4373417 Msa1173780:intron 45.0%
! TGCGGAAAGGTTTTGCTTGT+AGG + chr8_1:4373449-4373468 None:intergenic 45.0%
AAAACCTTTCCGCACTGGAT+TGG - chr8_1:4373455-4373474 Msa1173780:intron 45.0%
! CTTTTCCATCCAATCCAGTG+CGG + chr8_1:4373467-4373486 None:intergenic 45.0%
GGATCACAAAAGAAAGGGAG+AGG + chr8_1:4373872-4373891 None:intergenic 45.0%
GTGATCCAAACACACCCTTA+AGG - chr8_1:4373885-4373904 Msa1173780:intron 45.0%
!! ACACACCCTTAAGGTTTTGG+GGG - chr8_1:4373894-4373913 Msa1173780:intron 45.0%
ATCTCCCCCCAAAACCTTAA+GGG + chr8_1:4373902-4373921 None:intergenic 45.0%
AATCTCCCCCCAAAACCTTA+AGG + chr8_1:4373903-4373922 None:intergenic 45.0%
!!! TAAGGTTTTGGGGGGAGATT+CGG - chr8_1:4373903-4373922 Msa1173780:intron 45.0%
TAGATCATATGCGTGGTCAC+AGG - chr8_1:4374145-4374164 Msa1173780:intron 45.0%
! ATCTTGCTCGAGAAGCATGA+GGG - chr8_1:4374471-4374490 Msa1173780:intron 45.0%
AACTTGGAGCAGAGGAACTA+TGG + chr8_1:4374721-4374740 None:intergenic 45.0%
! GTGATCCCTTTTTCTCTCCA+TGG + chr8_1:4368464-4368483 None:intergenic 45.0%
GGAGAGAAAAAGGGATCACA+AGG - chr8_1:4375615-4375634 Msa1173780:CDS 45.0%
! CCAAATCAGGTAACTTGCCA+GGG + chr8_1:4375784-4375803 None:intergenic 45.0%
! TCCAAATCAGGTAACTTGCC+AGG + chr8_1:4375785-4375804 None:intergenic 45.0%
TAGGACTTACCATCCCCAAA+AGG + chr8_1:4375939-4375958 None:intergenic 45.0%
TGCTTCTATCATACTCCCTC+CGG - chr8_1:4376450-4376469 Msa1173780:intron 45.0%
CATATGTGCGAGAGTCAACT+AGG + chr8_1:4376679-4376698 None:intergenic 45.0%
ATTTGTCAAGGTGGGATGTG+TGG + chr8_1:4376986-4377005 None:intergenic 45.0%
AGACCTGCATTTGTCAAGGT+GGG + chr8_1:4376994-4377013 None:intergenic 45.0%
AAGACCTGCATTTGTCAAGG+TGG + chr8_1:4376995-4377014 None:intergenic 45.0%
TGCAGGTCTTGATCAAATGC+AGG - chr8_1:4377005-4377024 Msa1173780:intron 45.0%
ACAGGGACCAAAAATGCTGA+TGG - chr8_1:4377279-4377298 Msa1173780:intron 45.0%
AACTAGAACATCACGACCCA+AGG + chr8_1:4377453-4377472 None:intergenic 45.0%
AGGTACTCTATCCTTCCACT+TGG + chr8_1:4369656-4369675 None:intergenic 45.0%
AGTACATTGGTCCCCTAAGT+TGG + chr8_1:4378164-4378183 None:intergenic 45.0%
TAGGGGACCAATGTACTCAT+AGG - chr8_1:4378167-4378186 Msa1173780:CDS 45.0%
GGACCAATGTACTCATAGGT+AGG - chr8_1:4378171-4378190 Msa1173780:CDS 45.0%
TAACATGCGCGTCAAATTGG+AGG + chr8_1:4378412-4378431 None:intergenic 45.0%
GGGCAACAATCACACTCATA+AGG - chr8_1:4378747-4378766 Msa1173780:intron 45.0%
ACAGCTCCTCTAGGTATAGT+TGG + chr8_1:4379034-4379053 None:intergenic 45.0%
AACTATACCTAGAGGAGCTG+TGG - chr8_1:4379033-4379052 Msa1173780:intron 45.0%
CAAATTTCCACAGCTCCTCT+AGG + chr8_1:4379043-4379062 None:intergenic 45.0%
GAGGTTCATGGAAGAGTCAA+TGG - chr8_1:4379108-4379127 Msa1173780:intron 45.0%
CATGGAAGAGTCAATGGTGA+AGG - chr8_1:4379114-4379133 Msa1173780:intron 45.0%
TATGGAGGAGGAATAGTGCA+TGG + chr8_1:4370937-4370956 None:intergenic 45.0%
!!! ATATTAATTTTTCTTATAAT+TGG - chr8_1:4376382-4376401 Msa1173780:intron 5.0%
!!! ATTTTTTATTTAAAATTTTG+AGG + chr8_1:4377487-4377506 None:intergenic 5.0%
!! CATAAATAAAAATAAAAATT+AGG + chr8_1:4377660-4377679 None:intergenic 5.0%
ATAGCTACCACCACTGTGGT+TGG - chr8_1:4367314-4367333 Msa1173780:CDS 50.0%
CGAATCGACCAAGAACACCT+TGG - chr8_1:4367674-4367693 Msa1173780:intron 50.0%
CCAAATCAGGCAACTTGCCA+GGG + chr8_1:4368634-4368653 None:intergenic 50.0%
TCCAAATCAGGCAACTTGCC+AGG + chr8_1:4368635-4368654 None:intergenic 50.0%
CATCCCCAAAAGGACCAATC+TGG + chr8_1:4368779-4368798 None:intergenic 50.0%
!! CAGATTGGTCCTTTTGGGGA+TGG - chr8_1:4368777-4368796 Msa1173780:intron 50.0%
CCTCCAACATGCTCTTGAGA+TGG + chr8_1:4369042-4369061 None:intergenic 50.0%
! CCATCTCAAGAGCATGTTGG+AGG - chr8_1:4369039-4369058 Msa1173780:intron 50.0%
AAGGGAACCAACAGACCAAG+TGG - chr8_1:4369638-4369657 Msa1173780:intron 50.0%
GAACCAACAGACCAAGTGGA+AGG - chr8_1:4369642-4369661 Msa1173780:intron 50.0%
!! GTGTTGGTGTCGTGTTGTGT+CGG - chr8_1:4370533-4370552 Msa1173780:intron 50.0%
ACACGACACATGTCCGACAT+GGG - chr8_1:4370562-4370581 Msa1173780:intron 50.0%
GATTAGACGTGTCCCCATGT+CGG + chr8_1:4370578-4370597 None:intergenic 50.0%
CAAAACTCCACAGCTCCTTG+AGG + chr8_1:4370829-4370848 None:intergenic 50.0%
CATGGAGGAGTCAATGGTGA+AGG - chr8_1:4370894-4370913 Msa1173780:CDS 50.0%
!! GGCTAGTTTGGACAACGTAG+AGG - chr8_1:4371647-4371666 Msa1173780:intron 50.0%
GGACAACGTAGAGGGAATAC+TGG - chr8_1:4371656-4371675 Msa1173780:intron 50.0%
CGAAAGAAATCCATCCCCGT+CGG + chr8_1:4371718-4371737 None:intergenic 50.0%
TGGAAGAAGTGGTGCATGAG+AGG - chr8_1:4371923-4371942 Msa1173780:intron 50.0%
GGAAGAAGTGGTGCATGAGA+GGG - chr8_1:4371924-4371943 Msa1173780:intron 50.0%
GGAGAAAATTGGCGAGAGAG+AGG - chr8_1:4371945-4371964 Msa1173780:intron 50.0%
GGAATGTTAGGCGAAGGCTA+AGG - chr8_1:4372183-4372202 Msa1173780:intron 50.0%
! GGCTCCTCTTAGTGTTTCTG+AGG - chr8_1:4372800-4372819 Msa1173780:intron 50.0%
GGTGCCTCAGAAACACTAAG+AGG + chr8_1:4372807-4372826 None:intergenic 50.0%
GCGGCCAGACAAGCATATTA+TGG - chr8_1:4372976-4372995 Msa1173780:intron 50.0%
GGAACTACTGCAAAGAGGAG+AGG - chr8_1:4373403-4373422 Msa1173780:intron 50.0%
CAAGCAAAACCTTTCCGCAC+TGG - chr8_1:4373450-4373469 Msa1173780:intron 50.0%
GGGAGAGGAGAGTAAGTGAA+AGG + chr8_1:4373857-4373876 None:intergenic 50.0%
!!! CACACCCTTAAGGTTTTGGG+GGG - chr8_1:4373895-4373914 Msa1173780:intron 50.0%
! TCTAGGACTACAAGAGAGCG+AGG + chr8_1:4373931-4373950 None:intergenic 50.0%
CAGCACCCAGTGATAGATCT+CGG + chr8_1:4374352-4374371 None:intergenic 50.0%
! GATCTTGCTCGAGAAGCATG+AGG - chr8_1:4374470-4374489 Msa1173780:intron 50.0%
! TCTTGCTCGAGAAGCATGAG+GGG - chr8_1:4374472-4374491 Msa1173780:intron 50.0%
GGTCTTGGAGTCTGTCTTTG+TGG + chr8_1:4375448-4375467 None:intergenic 50.0%
CCCTGGCAAGTTACCTGATT+TGG - chr8_1:4375781-4375800 Msa1173780:intron 50.0%
! AAAGGAGGCGGTGAAGCATT+TGG + chr8_1:4375863-4375882 None:intergenic 50.0%
CATCCCCAAAAGGACCAATC+TGG + chr8_1:4368779-4368798 None:intergenic 50.0%
!! CAGATTGGTCCTTTTGGGGA+TGG - chr8_1:4368777-4368796 Msa1173780:intron 50.0%
AGATCAGATGGAGGAGAGTC+AGG - chr8_1:4376189-4376208 Msa1173780:CDS 50.0%
CATCCCACCTTGACAAATGC+AGG - chr8_1:4376988-4377007 Msa1173780:intron 50.0%
ACAGGCACAGTCAATAGGAG+AGG - chr8_1:4378910-4378929 Msa1173780:intron 50.0%
CCCTGGCAAGTTGCCTGATT+TGG - chr8_1:4368631-4368650 Msa1173780:CDS 55.0%
GTCAGTGTCCGTGTCATGTC+TGG + chr8_1:4370460-4370479 None:intergenic 55.0%
TGTCGGACATGTGTCGTGTC+CGG + chr8_1:4370561-4370580 None:intergenic 55.0%
GACACGACACATGTCCGACA+TGG - chr8_1:4370561-4370580 Msa1173780:intron 55.0%
CACGACACATGTCCGACATG+GGG - chr8_1:4370563-4370582 Msa1173780:intron 55.0%
ATGGGGACACGTCTAATCCG+AGG - chr8_1:4370580-4370599 Msa1173780:intron 55.0%
TCAGGCACAAGCAATAGGGG+AGG - chr8_1:4370696-4370715 Msa1173780:CDS 55.0%
! CAGTCGATCATTGCATCGGC+AGG - chr8_1:4373072-4373091 Msa1173780:intron 55.0%
!! CTAACCATGGGGGTACCTAG+TGG - chr8_1:4373175-4373194 Msa1173780:intron 55.0%
CCATCCAATCCAGTGCGGAA+AGG + chr8_1:4373462-4373481 None:intergenic 55.0%
! CCTTTCCGCACTGGATTGGA+TGG - chr8_1:4373459-4373478 Msa1173780:intron 55.0%
GGGTCACGGGAGAAACAATG+AGG + chr8_1:4373964-4373983 None:intergenic 55.0%
TTGGGGAGCAGTAAGGGTCA+CGG + chr8_1:4373978-4373997 None:intergenic 55.0%
GCACAGTCAATAGGAGAGGC+TGG - chr8_1:4378914-4378933 Msa1173780:intron 55.0%
! GTGTCGTGTTGTGTCGGTGC+CGG - chr8_1:4370539-4370558 Msa1173780:intron 60.0%
AGTTGCCGGTGGAGGCTTCA+CGG + chr8_1:4371695-4371714 None:intergenic 60.0%
TGGGGAGCAGTAAGGGTCAC+GGG + chr8_1:4373977-4373996 None:intergenic 60.0%
AGGCTTCACGGTCGTCGTCG+CGG + chr8_1:4371683-4371702 None:intergenic 65.0%
GACGACCGTGAAGCCTCCAC+CGG - chr8_1:4371687-4371706 Msa1173780:intron 65.0%
TCCATCCCCGTCGGAGTTGC+CGG + chr8_1:4371709-4371728 None:intergenic 65.0%
CACGCCACTAGGTACCCCCA+TGG + chr8_1:4373182-4373201 None:intergenic 65.0%
GCCTCCACCGGCAACTCCGA+CGG - chr8_1:4371699-4371718 Msa1173780:intron 70.0%
CCTCCACCGGCAACTCCGAC+GGG - chr8_1:4371700-4371719 Msa1173780:intron 70.0%
CTCCACCGGCAACTCCGACG+GGG - chr8_1:4371701-4371720 Msa1173780:intron 70.0%
ATCCCCGTCGGAGTTGCCGG+TGG + chr8_1:4371706-4371725 None:intergenic 70.0%
ACCGGCAACTCCGACGGGGA+TGG - chr8_1:4371705-4371724 Msa1173780:intron 70.0%
CCCGTCGGAGTTGCCGGTGG+AGG + chr8_1:4371703-4371722 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 4367049 4379496 4367049 ID=Msa1173780;Name=Msa1173780
chr8_1 mRNA 4367049 4379496 4367049 ID=Msa1173780-mRNA-1;Parent=Msa1173780;Name=Msa1173780-mRNA-1;_AED=0.14;_eAED=0.14;_QI=172|0.75|0.76|0.92|0.91|0.84|13|187|965
chr8_1 exon 4367049 4367152 4367049 ID=Msa1173780-mRNA-1:exon:1557;Parent=Msa1173780-mRNA-1
chr8_1 exon 4367180 4367631 4367180 ID=Msa1173780-mRNA-1:exon:1556;Parent=Msa1173780-mRNA-1
chr8_1 exon 4367777 4367987 4367777 ID=Msa1173780-mRNA-1:exon:1555;Parent=Msa1173780-mRNA-1
chr8_1 exon 4368357 4368421 4368357 ID=Msa1173780-mRNA-1:exon:1554;Parent=Msa1173780-mRNA-1
chr8_1 exon 4368544 4368736 4368544 ID=Msa1173780-mRNA-1:exon:1553;Parent=Msa1173780-mRNA-1
chr8_1 exon 4370597 4371119 4370597 ID=Msa1173780-mRNA-1:exon:1552;Parent=Msa1173780-mRNA-1
chr8_1 exon 4374759 4374897 4374759 ID=Msa1173780-mRNA-1:exon:1551;Parent=Msa1173780-mRNA-1
chr8_1 exon 4375534 4375743 4375534 ID=Msa1173780-mRNA-1:exon:1550;Parent=Msa1173780-mRNA-1
chr8_1 exon 4376174 4376384 4376174 ID=Msa1173780-mRNA-1:exon:1549;Parent=Msa1173780-mRNA-1
chr8_1 exon 4376604 4376668 4376604 ID=Msa1173780-mRNA-1:exon:1548;Parent=Msa1173780-mRNA-1
chr8_1 exon 4376765 4376957 4376765 ID=Msa1173780-mRNA-1:exon:1547;Parent=Msa1173780-mRNA-1
chr8_1 exon 4377747 4378300 4377747 ID=Msa1173780-mRNA-1:exon:1546;Parent=Msa1173780-mRNA-1
chr8_1 exon 4379160 4379496 4379160 ID=Msa1173780-mRNA-1:exon:1545;Parent=Msa1173780-mRNA-1
chr8_1 five_prime_UTR 4379325 4379496 4379325 ID=Msa1173780-mRNA-1:five_prime_utr;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4379160 4379324 4379160 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4377747 4378300 4377747 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4376765 4376957 4376765 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4376604 4376668 4376604 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4376174 4376384 4376174 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4375534 4375743 4375534 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4374759 4374897 4374759 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4370597 4371119 4370597 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4368544 4368736 4368544 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4368357 4368421 4368357 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4367777 4367987 4367777 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 CDS 4367263 4367631 4367263 ID=Msa1173780-mRNA-1:cds;Parent=Msa1173780-mRNA-1
chr8_1 three_prime_UTR 4367180 4367262 4367180 ID=Msa1173780-mRNA-1:three_prime_utr;Parent=Msa1173780-mRNA-1
chr8_1 three_prime_UTR 4367049 4367152 4367049 ID=Msa1173780-mRNA-1:three_prime_utr;Parent=Msa1173780-mRNA-1
Gene Sequence

>Msa1173780

ATGAACAAGGACAATGAAACATATCTTAAACTCTTCTGGGGTGGTTCTAATCGTCATAAGAGATGTTTCTTCACCAAGAAGGCTAAAGTTACAATAGCTACCACCACTGTGGTTGGTTTGTTTTGTTTAGTAGCCACTTTTTGTGATTTTGCAGCATGGAATACTTACATAATTGCAGGGAATTCCATCCCAAATCAAAACCTTTCATCCATCCACATAAGCAAAAACCACAAAGAACAAGAATTTCCACTTAGATGCACCAATGGAGAAAAAACTGAGAAACAAACATGTCCAAGAGACTACCCTACAAAACATAACCCAACAAATCTTAATAGTCAAACTTGTCCCTCATACTTTAGATGGATCCATGAAGATTTAAAACCATGGAGAGAAAAAGGGATCACTAGAGAAATGTTGGAAGGAGCAAGAAGAACAGCAAATTTTAAGGTTGTGATTGTGGATGGAAAAATGTATGTGGAAAAGTATAGGAAGTCAATTCAAACAAGAGATGTGTTTACTTTGTGGGGCATTTTGCAATTATTGAGAATGTACCCTGGCAAGTTGCCTGATTTGGAACTTATGTTTGATTGTGAAGATAGGCCTGTTATTCATAAGGCTAATTTTCAAGGTCCAAATGCTTCACCACCACCTTTGTTTAGATATTGTTCAGATCAATGGAGCTTGGATATTGTGTTCCCAGATTGGTCCTTTTGGGGATGGGCAGAGACAAATATAAAGCCATGGAAAAATACCCTTAAAGAGATAAAAGAAGGGAACCAACAGACCAAGTGGAAGGATAGAGTACCTTATGCGTATTGGAAGGGGAACCCTAATGTTGCTGCAACTAGGAAAAACCTTTTGAAATGCAATGCTACATCAAAAGATGATTGGAACACTCGCCTATACATACAAGACTGGGATAAAGAATCCACTCAAGGTTACAAGAAATCAAGCTTAGGGAATCAATGCACCCATAGGTATAAGATTTATATAGAAGGATGGGCTTGGTCAGTTAGTGAGAAATACATTATGGCATGTGATTCCATGACATTATATGTTAGACCCAATTTCTATGACTTTTTCATCAGAGGCATGGATCCATTACAACACTATTGGCCAATTAGGGATAATAGTAAATGCACCTCTCTTAAATTTGCTGTGGATTGGGGAAACAAACATGCTGATAAGCTTTTGAAATTTAAACCAACTATACCTCAAGGAGCTGTGGAGTTTTGCTCAGAAACAATGGCATGTGATGTAATTGGTACACAAAGGAAATTCATGGAGGAGTCAATGGTGAAGGTTCCTAGTGATTTAAATCCATGCACTATTCCTCCTCCATATGATCCTTTAACTTTACATGAACTTTTAGAGAGAAAAGCTAATTCAACAAGACAGGCTAGTTTGGACAACGTAGAGGGAATACTGGACCGCGACGACGACCGTGAAGCCTCCACCGGCAACTCCGACGGGGATGGATTTCTTTCGTTGCTTATGATTGCCCAAAGGATTAAGGTTAAGCTTCCTCCAAGAAGAGGTGTTTCAATTCCATTCATCCACAAAGACAGACTCCAAGACCAAGAAGATTTTCTTCTTAAATGCATACAAGGAAAATCTTTCAAACAAAAATGTCCAAGAGACTACCCTACAAAACATAACCCAACAAATCTCAACAACCATGTTTGTCCCTCATACTTTAGATGGATCCATGAAGATCTAAAACCATGGAGAGAAAAAGGGATCACAAGGAACATGTTGCAAAAGGCAAAAAGGACAGCACATTTCAAGCTTGTGATTGTGGATGGAAAGATGTATGTGGAAAAGTATAGGAAGTCAATTCAAACAAGAGATGTGTTTACTTTGTGGGGTATTTTGCAATTATTGAGAATGTACCCTGGCAAGTTACCTGATTTGGAACTTATGTTTGATTGTGAAGATAAGCCTGTTGTTCCTTTGGATAAGTTTCAAGGACCAAATGCTTCACCGCCTCCTTTGTTTAGATATTGTTCAGATCAATTGAGCTTAGATATTGTCTTTCCAGATTGGTCCTTTTGGGGATGGGCAGAGACAAATATAAAGCCATGGAAAAATATCCTTAAAGTCATAAATGAAGGGAACAAAAAGACCAAGTGGAAGGATAGAGTACCTTATGCTTATTGGAAGGGGAACCCTTATGTTGCTCCAACTAGACAAAACCTTCTACAATGCAATGTTACATTAGAAAATGATTGGAACACTCTCATATACATACAGGACTGGATACAAGAATCCAATCAAGGTTTCAACAAATCCAACTTAGGGGACCAATGTACTCATAGGTACAAGATATACATAGAAGGATGGGCTTGGTCAGTTAGTGAAAAATACATTATGGCTTGTGATTCCATGACATTATATGTAAAGTCCAATTACCATGATTTTTTCATAAGAGGCATGGTTCCCTTACAACATTATTGGCCTATTAGAGACAATAGTAAATGCACCTCTCTTAAATTTGCTGTGGAATGGGGCAACAATCACACTCATAAGGCACAGTCAATAGGAGAGGCTGGTAGCAAATTCATACAAGAGGACTTAGACATGAAAAATGTATACAATTACATGTTTCATCTACTAAATGAATATGCAAAGCTTTTGAAGTTCAAACCAACTATACCTAGAGGAGCTGTGGAAATTTGTCCTGAAAAATTAATGACATGTGATGTAATGGGTGGTAACAAAAGGAGGTTCATGGAAGAGTCAATGGTGAAGGTTGCTAGTGATTCAAATCCATGCACTATTCCTCCTCCATATGATCCTTTAGATTTAGAAGAATTTTTAGGGAGAAAAGCTAATTCAATAATGCAGGTAGAAATTTGGGAAGATGAATATTGGCAGAGTAAAAACAAGGGACAATAA
Protein sequence

>Msa1173780

MNKDNETYLKLFWGGSNRHKRCFFTKKAKVTIATTTVVGLFCLVATFCDFAAWNTYIIAGNSIPNQNLSSIHISKNHKEQEFPLRCTNGEKTEKQTCPRDYPTKHNPTNLNSQTCPSYFRWIHEDLKPWREKGITREMLEGARRTANFKVVIVDGKMYVEKYRKSIQTRDVFTLWGILQLLRMYPGKLPDLELMFDCEDRPVIHKANFQGPNASPPPLFRYCSDQWSLDIVFPDWSFWGWAETNIKPWKNTLKEIKEGNQQTKWKDRVPYAYWKGNPNVAATRKNLLKCNATSKDDWNTRLYIQDWDKESTQGYKKSSLGNQCTHRYKIYIEGWAWSVSEKYIMACDSMTLYVRPNFYDFFIRGMDPLQHYWPIRDNSKCTSLKFAVDWGNKHADKLLKFKPTIPQGAVEFCSETMACDVIGTQRKFMEESMVKVPSDLNPCTIPPPYDPLTLHELLERKANSTRQASLDNVEGILDRDDDREASTGNSDGDGFLSLLMIAQRIKVKLPPRRGVSIPFIHKDRLQDQEDFLLKCIQGKSFKQKCPRDYPTKHNPTNLNNHVCPSYFRWIHEDLKPWREKGITRNMLQKAKRTAHFKLVIVDGKMYVEKYRKSIQTRDVFTLWGILQLLRMYPGKLPDLELMFDCEDKPVVPLDKFQGPNASPPPLFRYCSDQLSLDIVFPDWSFWGWAETNIKPWKNILKVINEGNKKTKWKDRVPYAYWKGNPYVAPTRQNLLQCNVTLENDWNTLIYIQDWIQESNQGFNKSNLGDQCTHRYKIYIEGWAWSVSEKYIMACDSMTLYVKSNYHDFFIRGMVPLQHYWPIRDNSKCTSLKFAVEWGNNHTHKAQSIGEAGSKFIQEDLDMKNVYNYMFHLLNEYAKLLKFKPTIPRGAVEICPEKLMTCDVMGGNKRRFMEESMVKVASDSNPCTIPPPYDPLDLEEFLGRKANSIMQVEIWEDEYWQSKNKGQ*