AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1450880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450880 MtrunA17_Chr8g0349371 94.628 484 23 1 451 931 15 498 0.0 962
Msa1450880 MtrunA17_Chr8g0349371 72.531 324 72 4 6 329 3 309 4.01e-162 484
Msa1450880 MtrunA17_Chr8g0349371 71.053 76 20 2 336 409 410 485 1.56e-24 108
Msa1450880 MtrunA17_Chr8g0349361 72.849 523 114 6 428 931 2 515 0.0 784
Msa1450880 MtrunA17_Chr8g0349361 93.921 329 19 1 1 329 1 328 0.0 652
Msa1450880 MtrunA17_Chr8g0349361 89.189 74 8 0 336 409 429 502 1.36e-34 139
Msa1450880 MtrunA17_Chr5g0397701 64.548 409 136 3 520 926 99 500 0.0 573
Msa1450880 MtrunA17_Chr5g0397701 50.309 324 129 7 20 326 6 314 1.36e-99 321
Msa1450880 MtrunA17_Chr5g0397701 46.835 79 36 2 336 413 418 491 8.98e-14 75.1
Msa1450880 MtrunA17_Chr6g0471441 58.559 444 170 6 492 928 69 505 0.0 551
Msa1450880 MtrunA17_Chr6g0471441 56.410 273 112 4 59 326 48 318 7.17e-100 322
Msa1450880 MtrunA17_Chr6g0471441 48.649 74 38 0 336 409 422 495 6.68e-17 85.1
Msa1450880 MtrunA17_Chr8g0349241 56.250 432 184 5 488 917 60 488 1.33e-176 521
Msa1450880 MtrunA17_Chr8g0349241 56.604 265 110 4 68 329 53 315 3.06e-102 328
Msa1450880 MtrunA17_Chr8g0349241 54.167 72 33 0 336 407 416 487 2.14e-17 86.7
Msa1450880 MtrunA17_Chr7g0247251 57.796 372 154 3 527 897 27 396 1.71e-158 471
Msa1450880 MtrunA17_Chr7g0247251 52.066 242 108 3 95 329 3 243 1.04e-84 277
Msa1450880 MtrunA17_Chr7g0247251 54.098 61 28 0 328 388 336 396 6.22e-12 68.6
Msa1450880 MtrunA17_Chr7g0247261 52.415 414 185 6 491 897 35 443 2.99e-157 469
Msa1450880 MtrunA17_Chr7g0247261 51.341 261 116 5 76 329 34 290 1.53e-89 292
Msa1450880 MtrunA17_Chr3g0104841 45.528 369 191 6 528 895 106 465 4.66e-112 352
Msa1450880 MtrunA17_Chr3g0104841 40.753 292 151 6 113 402 104 375 5.04e-65 226
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450880 AT2G45830.4 61.987 463 163 5 468 925 61 515 0.0 598
Msa1450880 AT2G45830.4 57.097 310 115 7 27 329 36 334 5.57e-113 357
Msa1450880 AT2G45830.4 54.167 72 33 0 336 407 435 506 2.21e-16 84.0
Msa1450880 AT2G45830.1 61.987 463 163 5 468 925 61 515 0.0 598
Msa1450880 AT2G45830.1 57.097 310 115 7 27 329 36 334 5.57e-113 357
Msa1450880 AT2G45830.1 54.167 72 33 0 336 407 435 506 2.21e-16 84.0
Msa1450880 AT3G61270.1 63.700 427 152 3 501 926 69 493 0.0 580
Msa1450880 AT3G61270.1 54.140 314 131 4 18 329 9 311 5.96e-108 343
Msa1450880 AT3G61270.1 53.425 73 34 0 337 409 413 485 4.60e-15 79.7
Msa1450880 AT5G23850.1 59.417 446 163 7 495 929 101 539 0.0 564
Msa1450880 AT5G23850.1 61.154 260 84 5 81 329 101 354 2.42e-103 332
Msa1450880 AT5G23850.1 55.405 74 33 0 330 403 449 522 8.11e-19 91.7
Msa1450880 AT2G45830.3 68.717 374 114 3 551 923 1 372 0.0 547
Msa1450880 AT2G45830.3 70.984 193 55 1 138 329 1 193 3.56e-94 303
Msa1450880 AT2G45830.3 54.167 72 33 0 336 407 294 365 7.32e-17 84.3
Msa1450880 AT2G45830.6 68.717 374 114 3 551 923 1 372 0.0 547
Msa1450880 AT2G45830.6 70.984 193 55 1 138 329 1 193 3.56e-94 303
Msa1450880 AT2G45830.6 54.167 72 33 0 336 407 294 365 7.32e-17 84.3
Msa1450880 AT2G45830.2 68.717 374 114 3 551 923 1 372 0.0 547
Msa1450880 AT2G45830.2 70.984 193 55 1 138 329 1 193 3.56e-94 303
Msa1450880 AT2G45830.2 54.167 72 33 0 336 407 294 365 7.32e-17 84.3
Msa1450880 AT2G45830.5 68.717 374 114 3 551 923 1 372 0.0 547
Msa1450880 AT2G45830.5 70.984 193 55 1 138 329 1 193 3.56e-94 303
Msa1450880 AT2G45830.5 54.167 72 33 0 336 407 294 365 7.32e-17 84.3
Msa1450880 AT3G61270.2 66.223 376 125 2 551 926 1 374 0.0 528
Msa1450880 AT3G61270.2 68.750 192 60 0 138 329 1 192 1.28e-89 290
Msa1450880 AT3G61270.2 53.425 73 34 0 337 409 294 366 2.12e-15 79.7
Msa1450880 AT3G48980.2 56.177 429 177 5 510 929 116 542 1.68e-180 533
Msa1450880 AT3G48980.2 58.555 263 100 3 76 329 95 357 2.59e-101 327
Msa1450880 AT3G48980.2 52.174 69 33 0 336 404 458 526 1.35e-17 87.8
Msa1450880 AT3G48980.1 56.177 429 177 5 510 929 110 536 1.72e-180 533
Msa1450880 AT3G48980.1 58.555 263 100 3 76 329 89 351 2.34e-101 327
Msa1450880 AT3G48980.1 50.704 71 35 0 336 406 452 522 1.35e-17 87.8
Msa1450880 AT1G63420.1 59.390 426 162 5 510 925 151 575 2.00e-177 526
Msa1450880 AT1G63420.1 57.500 240 96 3 96 329 150 389 6.11e-86 287
Msa1450880 AT1G63420.1 40.260 77 41 1 336 407 490 566 4.21e-11 67.4
Msa1450880 AT3G61280.1 53.066 424 196 1 508 928 111 534 7.56e-163 487
Msa1450880 AT3G61280.1 47.077 325 155 4 22 329 24 348 1.59e-91 301
Msa1450880 AT2G45840.1 51.441 451 207 5 485 929 75 519 2.69e-161 483
Msa1450880 AT2G45840.1 52.174 253 111 3 82 329 86 333 1.28e-83 279
Msa1450880 AT3G61290.1 52.817 426 197 2 508 929 24 449 6.78e-158 471
Msa1450880 AT3G61290.1 54.980 251 104 3 83 329 17 262 1.46e-85 282
Msa1450880 AT1G63420.2 61.889 307 111 3 510 810 151 457 1.79e-130 401
Msa1450880 AT1G63420.2 57.500 240 96 3 96 329 150 389 5.83e-87 286
Msa1450880 AT1G07220.1 46.701 394 199 7 528 920 115 498 4.03e-123 383
Msa1450880 AT1G07220.1 39.432 317 152 9 40 329 22 325 5.52e-71 244
Msa1450880 AT3G61280.2 46.914 324 155 4 22 328 24 347 1.62e-93 301
Msa1450880 AT3G61280.2 54.959 242 106 1 508 746 111 352 2.64e-89 290

Find 222 sgRNAs with CRISPR-Local

Find 784 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTCATTTATGACTTTA+AGG 0.040113 tig0033134:-16564 Msa1450880:intergenic
GCAAGTAACTTTAGCTTTCT+TGG 0.142798 tig0033134:-13616 Msa1450880:intergenic
CAATAATGCAGGTAGAAATT+TGG 0.165888 tig0033134:+17943 Msa1450880:CDS
ATAGAGTACCTTATGCTTAT+TGG 0.187130 tig0033134:+16608 Msa1450880:CDS
TTTACTATTTAGATAGTATT+TGG 0.193374 tig0033134:-18186 Msa1450880:intergenic
TATTGTAACTTTAGCCTTCT+TGG 0.194591 tig0033134:-5785 Msa1450880:intergenic
AAACATATCTTAAACTCTTC+TGG 0.202488 tig0033134:+5728 Msa1450880:CDS
CTAAAACCATGGAGAGAAAA+AGG 0.213324 tig0033134:+14327 Msa1450880:CDS
TTAAAACCATGGAGAGAAAA+AGG 0.219883 tig0033134:+7162 Msa1450880:CDS
AAAAGTTCATGTAAAGTTAA+AGG 0.231019 tig0033134:-9720 Msa1450880:intergenic
TCTTTCCAGATTGGTCCTTT+TGG 0.237147 tig0033134:+14643 Msa1450880:CDS
TGTTCCCAGATTGGTCCTTT+TGG 0.251598 tig0033134:+7478 Msa1450880:CDS
CCCTGGCAAGTTACCTGATT+TGG 0.253051 tig0033134:+14503 Msa1450880:CDS
GAAAATCTTGAAGGCTAGTT+TGG 0.275454 tig0033134:+10394 Msa1450880:intron
TGGTTCCCTTACAACATTAT+TGG 0.275707 tig0033134:+17396 Msa1450880:CDS
ATTTAAGAAGAAAATCTTCT+TGG 0.282497 tig0033134:-14188 Msa1450880:intergenic
GAAGAAAATCTTCTTGGTCT+TGG 0.291982 tig0033134:-14182 Msa1450880:intergenic
CCCTGGCAAGTTGCCTGATT+TGG 0.297539 tig0033134:+7338 Msa1450880:CDS
TTATGATTGCCCAAGGATTA+AGG 0.302779 tig0033134:+10501 Msa1450880:CDS
TTCCTAGTTGCAGCAACATT+AGG 0.310919 tig0033134:-8402 Msa1450880:intergenic
CAACAATGCACATAAAATTA+AGG 0.311652 tig0033134:-8920 Msa1450880:intergenic
TCCATCCCCGTCGGAGTTGC+CGG 0.311922 tig0033134:-10465 Msa1450880:intergenic
ATTACTGACATACCTCTTCT+TGG 0.312541 tig0033134:-10535 Msa1450880:intergenic
GTGGAAATTCTTGTTCTTTG+TGG 0.315442 tig0033134:-7014 Msa1450880:intergenic
TTTGTCCCTCATACTTTAGA+TGG 0.317721 tig0033134:+14292 Msa1450880:CDS
AATAATGCAGGTAGAAATTT+GGG 0.322510 tig0033134:+17944 Msa1450880:CDS
CATTTACTATTGTCTCTAAT+AGG 0.329746 tig0033134:-17419 Msa1450880:intergenic
TCTTAAATTTGCTGTGGAAT+GGG 0.339721 tig0033134:+17448 Msa1450880:CDS
CTTGTCCCTCATACTTTAGA+TGG 0.357728 tig0033134:+7127 Msa1450880:CDS
AGATAAGCCTGTTGTTCCTT+TGG 0.358733 tig0033134:+14545 Msa1450880:CDS
TCCTAGTTGCAGCAACATTA+GGG 0.365225 tig0033134:-8401 Msa1450880:intergenic
AAATTAGCCTTATGAATAAC+AGG 0.368661 tig0033134:-7387 Msa1450880:intergenic
ATGTAACATTGCATTGTAGA+AGG 0.368839 tig0033134:-16666 Msa1450880:intergenic
CTCTTAAATTTGCTGTGGAA+TGG 0.371549 tig0033134:+17447 Msa1450880:CDS
AACATATCTTAAACTCTTCT+GGG 0.371728 tig0033134:+5729 Msa1450880:CDS
TTAGATATTGTTCAGATCAA+TGG 0.371772 tig0033134:+7442 Msa1450880:CDS
ACATGTTGCAAAAGGCAAAA+AGG 0.375767 tig0033134:+14361 Msa1450880:CDS
TTTGATAGTTGATAGACATT+TGG 0.376339 tig0033134:+18155 Msa1450880:three_prime_UTR
AATAGGCCAATAATGTTGTA+AGG 0.379435 tig0033134:-17402 Msa1450880:intergenic
TAGATATTGTCTTTCCAGAT+TGG 0.382916 tig0033134:+14634 Msa1450880:CDS
GGTCTTGGAGTCTGTCTTTG+TGG 0.390236 tig0033134:-14167 Msa1450880:intergenic
CAAGAGATGTGTTTACTTTG+TGG 0.399333 tig0033134:+14454 Msa1450880:CDS
CAAGAGATGTGTTTACTTTG+TGG 0.400032 tig0033134:+7289 Msa1450880:CDS
TGTCTAGTTGGAGCAACATA+AGG 0.400620 tig0033134:-16640 Msa1450880:intergenic
TTATGTTTGATTGTGAAGAT+AGG 0.400717 tig0033134:+7364 Msa1450880:CDS
TGGATATTGTGTTCCCAGAT+TGG 0.404783 tig0033134:+7469 Msa1450880:CDS
AAAGGTGGTGGTGAAGCATT+TGG 0.405458 tig0033134:-7417 Msa1450880:intergenic
TTATTAAAGTACATAATTGC+AGG 0.406413 tig0033134:+6943 Msa1450880:intron
TCTAAATCTAAAGGATCATA+TGG 0.408752 tig0033134:-17894 Msa1450880:intergenic
TTTATGTGCATTGTTGGAAC+AGG 0.416789 tig0033134:+8927 Msa1450880:CDS
AAATTTGGGAAGATGAATAT+TGG 0.417589 tig0033134:+17958 Msa1450880:CDS
GGTTTCAACAAATCCAACTT+AGG 0.419553 tig0033134:+16870 Msa1450880:CDS
CATCCCCAAAAGGACCAATC+TGG 0.419621 tig0033134:-7483 Msa1450880:intergenic
ATGTTACATTAGAAAATGAT+TGG 0.422826 tig0033134:+16680 Msa1450880:CDS
TGTAAAGTTAAAGGATCATA+TGG 0.424187 tig0033134:-9711 Msa1450880:intergenic
GGATTTGTTGAAACCTTGAT+TGG 0.424372 tig0033134:-16862 Msa1450880:intergenic
GTTTGACTATTAAGATTTGT+TGG 0.424661 tig0033134:-7105 Msa1450880:intergenic
ATGGATCCATCTAAAGTATG+AGG 0.427483 tig0033134:-14298 Msa1450880:intergenic
ATGGATCCATCTAAAGTATG+AGG 0.427483 tig0033134:-7133 Msa1450880:intergenic
AACTTATCCAAAGGAACAAC+AGG 0.427577 tig0033134:-14552 Msa1450880:intergenic
ATGCTACATCAAAAGATGAT+TGG 0.430911 tig0033134:+8442 Msa1450880:CDS
AAAGGAGGCGGTGAAGCATT+TGG 0.431656 tig0033134:-14582 Msa1450880:intergenic
TCCAAATCAGGCAACTTGCC+AGG 0.431840 tig0033134:-7339 Msa1450880:intergenic
GTTCCTTTGGATAAGTTTCA+AGG 0.433005 tig0033134:+14558 Msa1450880:CDS
TATCCTTCCACTTGGTCTGT+TGG 0.434188 tig0033134:-8350 Msa1450880:intergenic
GGAAGCTTAACCTTAATCCT+TGG 0.436821 tig0033134:-10511 Msa1450880:intergenic
AAGAGATGTGTTTACTTTGT+GGG 0.437198 tig0033134:+14455 Msa1450880:CDS
AAGAGATGTGTTTACTTTGT+GGG 0.437898 tig0033134:+7290 Msa1450880:CDS
ACAGCTCCTTGAGGTATAGT+TGG 0.440110 tig0033134:-9576 Msa1450880:intergenic
AGCTAAAGTTACTTGCTTAG+TGG 0.442735 tig0033134:+13623 Msa1450880:CDS
ACAGCTCCTCTAGGTATAGT+TGG 0.445298 tig0033134:-17753 Msa1450880:intergenic
TCAAACATAAGTTCCAAATC+AGG 0.446282 tig0033134:-7351 Msa1450880:intergenic
TCCAAATCAGGTAACTTGCC+AGG 0.447409 tig0033134:-14504 Msa1450880:intergenic
ATCCTTAAAGTCATAAATGA+AGG 0.447803 tig0033134:+16562 Msa1450880:CDS
GGTTACAAGAAATCAAGCTT+AGG 0.447993 tig0033134:+8599 Msa1450880:CDS
ATTAATGACATGTGATGTAA+TGG 0.449605 tig0033134:+17794 Msa1450880:CDS
TTTGACTATTAAGATTTGTT+GGG 0.449665 tig0033134:-7104 Msa1450880:intergenic
TCAAACATAAGTTCCAAATC+AGG 0.450342 tig0033134:-14516 Msa1450880:intergenic
TGGTACACAAAGGAAATTCA+TGG 0.455426 tig0033134:+9635 Msa1450880:CDS
ACAATGGCATGTGATGTAAT+TGG 0.458295 tig0033134:+9615 Msa1450880:CDS
TGATTTCTTGTAACCTTGAG+TGG 0.459596 tig0033134:-8591 Msa1450880:intergenic
AGTACATTGGTCCCCTAAGT+TGG 0.460514 tig0033134:-16883 Msa1450880:intergenic
GAAATTCATGGAGGAGTCAA+TGG 0.462936 tig0033134:+9647 Msa1450880:CDS
CCCGTCGGAGTTGCCGGTGG+AGG 0.463613 tig0033134:-10459 Msa1450880:intergenic
ACATGGTTGTTGAGATTTGT+TGG 0.465017 tig0033134:-14270 Msa1450880:intergenic
ATAGAGTACCTTATGCGTAT+TGG 0.465578 tig0033134:+8370 Msa1450880:CDS
GTTTCAACAAATCCAACTTA+GGG 0.466088 tig0033134:+16871 Msa1450880:CDS
ACCCTTAAAGAGATAAAAGA+AGG 0.466174 tig0033134:+8324 Msa1450880:CDS
CCTCCACCGGCAACTCCGAC+GGG 0.467619 tig0033134:+10459 Msa1450880:CDS
AAAAGCTAATTCAACAAGAC+AGG 0.470223 tig0033134:+9749 Msa1450880:CDS
ATCTAACAGGCACAGTCAAT+AGG 0.470737 tig0033134:+17627 Msa1450880:intron
GTCTAGTTGGAGCAACATAA+GGG 0.474459 tig0033134:-16639 Msa1450880:intergenic
GTTACAAGAAATCAAGCTTA+GGG 0.476523 tig0033134:+8600 Msa1450880:CDS
GAAGCTTAACCTTAATCCTT+GGG 0.476613 tig0033134:-10510 Msa1450880:intergenic
ATGTAGCATTGCATTTCAAA+AGG 0.477688 tig0033134:-8428 Msa1450880:intergenic
CATCCCCAAAAGGACCAATC+TGG 0.479726 tig0033134:-14648 Msa1450880:intergenic
AGTCTGTCTTTGTGGATGAA+TGG 0.483457 tig0033134:-14159 Msa1450880:intergenic
TTTCTTCTTAAATGCATACA+AGG 0.487305 tig0033134:+14198 Msa1450880:CDS
AGGGATCACTAGAGAAATGT+TGG 0.487877 tig0033134:+7182 Msa1450880:CDS
TGGTAACAAAAGGAGGTTCA+TGG 0.489195 tig0033134:+17818 Msa1450880:CDS
ACCGGCAACTCCGACGGGGA+TGG 0.492383 tig0033134:+10464 Msa1450880:CDS
CACAAGGAACATGTTGCAAA+AGG 0.493524 tig0033134:+14353 Msa1450880:CDS
TTTAAGGTTGTGATTGTGGA+TGG 0.495644 tig0033134:+7228 Msa1450880:CDS
AGGTACAAGATATACATAGA+AGG 0.497660 tig0033134:+17278 Msa1450880:intron
AAATGTATGTGGAAAAGTAT+AGG 0.497830 tig0033134:+7253 Msa1450880:CDS
GCACAGTCAATAGGAGAGGC+TGG 0.500817 tig0033134:+17636 Msa1450880:CDS
GTACCTTATGCTTATTGGAA+GGG 0.503766 tig0033134:+16613 Msa1450880:CDS
TACCTTATGCTTATTGGAAG+GGG 0.503930 tig0033134:+16614 Msa1450880:CDS
GGACAACGTAGAGGGAATAC+TGG 0.504237 tig0033134:+10415 Msa1450880:CDS
AGTTGCCGGTGGAGGCTTCA+CGG 0.506650 tig0033134:-10451 Msa1450880:intergenic
CATGGTTGTTGAGATTTGTT+GGG 0.508593 tig0033134:-14269 Msa1450880:intergenic
TTCAAGCTTGTGATTGTGGA+TGG 0.510075 tig0033134:+14393 Msa1450880:CDS
TGCTTATGTGGATGGATGAA+AGG 0.511051 tig0033134:-6987 Msa1450880:intergenic
TTCCCCTTCCAATACGCATA+AGG 0.511345 tig0033134:-8378 Msa1450880:intergenic
AGATAGGCCTGTTATTCATA+AGG 0.511562 tig0033134:+7380 Msa1450880:CDS
AAAAGCTAATTCAATAATGC+AGG 0.515286 tig0033134:+17932 Msa1450880:CDS
TTCCCCTTCCAATAAGCATA+AGG 0.515441 tig0033134:-16616 Msa1450880:intergenic
GCCTCCACCGGCAACTCCGA+CGG 0.516201 tig0033134:+10458 Msa1450880:CDS
GAGGTTCATGGAAGAGTCAA+TGG 0.516306 tig0033134:+17830 Msa1450880:CDS
CTTAAATTTGCTGTGGAATG+GGG 0.516885 tig0033134:+17449 Msa1450880:CDS
AGATGTATGTGGAAAAGTAT+AGG 0.517281 tig0033134:+14418 Msa1450880:CDS
TAGGGGACCAATGTACTCAT+AGG 0.518424 tig0033134:+16889 Msa1450880:CDS
GAGATGTTTCTTCACCAAGA+AGG 0.520532 tig0033134:+5771 Msa1450880:CDS
ATCCCCAAAAGGACCAATCT+GGG 0.523594 tig0033134:-7482 Msa1450880:intergenic
TCTCCATTGGTGCATCTAAG+TGG 0.528007 tig0033134:-7033 Msa1450880:intergenic
ACAAGATATACATAGAAGGA+TGG 0.528604 tig0033134:+17282 Msa1450880:CDS
CAAATTTCCACAGCTCCTCT+AGG 0.531706 tig0033134:-17762 Msa1450880:intergenic
AGTACCTTATGCTTATTGGA+AGG 0.533255 tig0033134:+16612 Msa1450880:CDS
GGGCAACAATCACACTCATA+AGG 0.533532 tig0033134:+17469 Msa1450880:CDS
TTGTTCAGATCAATGGAGCT+TGG 0.533796 tig0033134:+7449 Msa1450880:CDS
GTACCTTATGCGTATTGGAA+GGG 0.533965 tig0033134:+8375 Msa1450880:CDS
CACCTCTCTTAAATTTGCTG+TGG 0.534214 tig0033134:+17442 Msa1450880:CDS
TATGAAAGAGAGTGTTGGAA+GGG 0.535251 tig0033134:-5613 Msa1450880:intergenic
TATACATAGAAGGATGGGCT+TGG 0.537356 tig0033134:+17288 Msa1450880:CDS
GAACACTCTCATATACATAC+AGG 0.538416 tig0033134:+16702 Msa1450880:CDS
ACTGACATACCTCTTCTTGG+AGG 0.545373 tig0033134:-10532 Msa1450880:intergenic
TATTAAAGTACATAATTGCA+GGG 0.546277 tig0033134:+6944 Msa1450880:intron
TACCTTATGCGTATTGGAAG+GGG 0.549376 tig0033134:+8376 Msa1450880:CDS
TAGTACTTACCATCCCCAAA+AGG 0.554356 tig0033134:-7493 Msa1450880:intergenic
TAGGACTTACCATCCCCAAA+AGG 0.555947 tig0033134:-14658 Msa1450880:intergenic
ATATGAAAGAGAGTGTTGGA+AGG 0.556828 tig0033134:-5614 Msa1450880:intergenic
TCGTTGCTTATGATTGCCCA+AGG 0.556892 tig0033134:+10494 Msa1450880:CDS
AGTACCTTATGCGTATTGGA+AGG 0.557377 tig0033134:+8374 Msa1450880:CDS
GTATATATGAAAGAGAGTGT+TGG 0.559027 tig0033134:-5618 Msa1450880:intergenic
TTAATGACATGTGATGTAAT+GGG 0.559079 tig0033134:+17795 Msa1450880:CDS
ACATTTCAAGCTTGTGATTG+TGG 0.560222 tig0033134:+14389 Msa1450880:CDS
GGTCCTTGAAACTTATCCAA+AGG 0.560298 tig0033134:-14561 Msa1450880:intergenic
AGAGATGTGTTTACTTTGTG+GGG 0.562043 tig0033134:+7291 Msa1450880:CDS
AGAGATGTGTTTACTTTGTG+GGG 0.562176 tig0033134:+14456 Msa1450880:CDS
CAAGATATACATAGAAGGAT+GGG 0.562972 tig0033134:+17283 Msa1450880:CDS
GGACTTTACATATAATGTCA+TGG 0.570834 tig0033134:-17345 Msa1450880:intergenic
TGGATACAAGAATCCAATCA+AGG 0.571881 tig0033134:+16849 Msa1450880:CDS
GTTAAAGGATCATATGGAGG+AGG 0.572145 tig0033134:-9705 Msa1450880:intergenic
AACTATACCTCAAGGAGCTG+TGG 0.573210 tig0033134:+9578 Msa1450880:CDS
TTTCCACTTAGATGCACCAA+TGG 0.577671 tig0033134:+7030 Msa1450880:CDS
AACTATACCTAGAGGAGCTG+TGG 0.578398 tig0033134:+17755 Msa1450880:CDS
CAGAGACAAATATAAAGCCA+TGG 0.587033 tig0033134:+16533 Msa1450880:CDS
CAGAGACAAATATAAAGCCA+TGG 0.587033 tig0033134:+8295 Msa1450880:CDS
TCCATGAAGATCTAAAACCA+TGG 0.587436 tig0033134:+14316 Msa1450880:CDS
TCTAAAGGATCATATGGAGG+AGG 0.587652 tig0033134:-17888 Msa1450880:intergenic
CCAAATCAGGCAACTTGCCA+GGG 0.588415 tig0033134:-7338 Msa1450880:intergenic
ATAGGCCAATAATGTTGTAA+GGG 0.591312 tig0033134:-17401 Msa1450880:intergenic
TAGGGAATCAATGCACCCAT+AGG 0.592624 tig0033134:+8618 Msa1450880:CDS
GAAGGGAGAGAGAATGAACA+TGG 0.595451 tig0033134:-5596 Msa1450880:intergenic
GACGACCGTGAAGCCTCCAC+CGG 0.595597 tig0033134:+10446 Msa1450880:CDS
ATAGCTACCACCACTGTGGT+TGG 0.596622 tig0033134:+5805 Msa1450880:CDS
CAATATCTAAACAAAGGTGG+TGG 0.597320 tig0033134:-7429 Msa1450880:intergenic
CCAAATCAGGTAACTTGCCA+GGG 0.599314 tig0033134:-14503 Msa1450880:intergenic
GTTAAGCTTCCTCCAAGAAG+AGG 0.602545 tig0033134:+10523 Msa1450880:CDS
CATGGAAGAGTCAATGGTGA+AGG 0.603386 tig0033134:+17836 Msa1450880:CDS
TATGGAGGAGGAATAGTGCA+TGG 0.604369 tig0033134:-17876 Msa1450880:intergenic
TATGGAGGAGGAATAGTGCA+TGG 0.604369 tig0033134:-9693 Msa1450880:intergenic
ACCCTAATGTTGCTGCAACT+AGG 0.605182 tig0033134:+8400 Msa1450880:CDS
CATGGAGGAGTCAATGGTGA+AGG 0.605682 tig0033134:+9653 Msa1450880:CDS
TTTAAACCAACTATACCTCA+AGG 0.606630 tig0033134:+9570 Msa1450880:CDS
ATCCCCGTCGGAGTTGCCGG+TGG 0.606823 tig0033134:-10462 Msa1450880:intergenic
TCCTTAAAGTCATAAATGAA+GGG 0.609424 tig0033134:+16563 Msa1450880:CDS
TATCTTAAACTCTTCTGGGG+TGG 0.610291 tig0033134:+5733 Msa1450880:CDS
TCCATGAAGATTTAAAACCA+TGG 0.611046 tig0033134:+7151 Msa1450880:CDS
AAGGGAACCAACAGACCAAG+TGG 0.618221 tig0033134:+8343 Msa1450880:CDS
ATGTAATGGGTGGTAACAAA+AGG 0.619846 tig0033134:+17808 Msa1450880:CDS
TGTGGATGGAAAGATGTATG+TGG 0.621271 tig0033134:+14407 Msa1450880:CDS
TGGATCCATCTAAAGTATGA+GGG 0.622254 tig0033134:-14297 Msa1450880:intergenic
TGGATCCATCTAAAGTATGA+GGG 0.622254 tig0033134:-7132 Msa1450880:intergenic
CAATATCTAAACAAAGGAGG+CGG 0.622297 tig0033134:-14594 Msa1450880:intergenic
AAAGTTAAAGGATCATATGG+AGG 0.624764 tig0033134:-9708 Msa1450880:intergenic
ATCACTAGAGAAATGTTGGA+AGG 0.629506 tig0033134:+7186 Msa1450880:CDS
TAATGGGTGGTAACAAAAGG+AGG 0.630766 tig0033134:+17811 Msa1450880:CDS
TCTGAACAATATCTAAACAA+AGG 0.632316 tig0033134:-14600 Msa1450880:intergenic
TGGTAGCAAATTCATACAAG+AGG 0.633461 tig0033134:+17656 Msa1450880:CDS
TCACCTACCTATGAGTACAT+TGG 0.633848 tig0033134:-16896 Msa1450880:intergenic
TTCCACAGCAAATTTAAGAG+AGG 0.634434 tig0033134:-17444 Msa1450880:intergenic
GAACAATATCTAAACAAAGG+TGG 0.635135 tig0033134:-7432 Msa1450880:intergenic
GCTAGTTTGGACAACGTAGA+GGG 0.635978 tig0033134:+10407 Msa1450880:CDS
CCCTTAAAGAGATAAAAGAA+GGG 0.639732 tig0033134:+8325 Msa1450880:CDS
TGGGATAAAGAATCCACTCA+AGG 0.640081 tig0033134:+8578 Msa1450880:CDS
TCTGAACAATATCTAAACAA+AGG 0.640511 tig0033134:-7435 Msa1450880:intergenic
GAACAATATCTAAACAAAGG+AGG 0.640570 tig0033134:-14597 Msa1450880:intergenic
GGCTAGTTTGGACAACGTAG+AGG 0.641045 tig0033134:+10406 Msa1450880:intron
CAATTATTGAGAATGTACCC+TGG 0.642475 tig0033134:+14486 Msa1450880:CDS
CAATTATTGAGAATGTACCC+TGG 0.642475 tig0033134:+7321 Msa1450880:CDS
GTGATGTAATTGGTACACAA+AGG 0.644655 tig0033134:+9625 Msa1450880:CDS
GTGCATGGATTTAAATCACT+AGG 0.647032 tig0033134:-9678 Msa1450880:intergenic
GAACCAACAGACCAAGTGGA+AGG 0.647617 tig0033134:+8347 Msa1450880:CDS
CAAAACTCCACAGCTCCTTG+AGG 0.648484 tig0033134:-9585 Msa1450880:intergenic
AGGTACTCTATCCTTCCACT+TGG 0.660422 tig0033134:-16596 Msa1450880:intergenic
AGGTACTCTATCCTTCCACT+TGG 0.660422 tig0033134:-8358 Msa1450880:intergenic
TAAAGTATGAGGGACAAACA+TGG 0.661067 tig0033134:-14287 Msa1450880:intergenic
AGGCTTCACGGTCGTCGTCG+CGG 0.661887 tig0033134:-10439 Msa1450880:intergenic
AAACAAACCAACCACAGTGG+TGG 0.666348 tig0033134:-5812 Msa1450880:intergenic
AAATCTAAAGGATCATATGG+AGG 0.667890 tig0033134:-17891 Msa1450880:intergenic
TTTCAACAAATCCAACTTAG+GGG 0.669976 tig0033134:+16872 Msa1450880:CDS
ACAGGCACAGTCAATAGGAG+AGG 0.670596 tig0033134:+17632 Msa1450880:intron
ATTCAACTCAAACATGAACA+AGG 0.670929 tig0033134:+5699 Msa1450880:exon
ACATATCTTAAACTCTTCTG+GGG 0.672048 tig0033134:+5730 Msa1450880:CDS
CGAAAGAAATCCATCCCCGT+CGG 0.673085 tig0033134:-10474 Msa1450880:intergenic
CTCCACCGGCAACTCCGACG+GGG 0.681589 tig0033134:+10460 Msa1450880:CDS
TTCAAACCAACTATACCTAG+AGG 0.684725 tig0033134:+17747 Msa1450880:CDS
TACAATAGCTACCACCACTG+TGG 0.741658 tig0033134:+5801 Msa1450880:CDS
ATGACATGTGATGTAATGGG+TGG 0.745292 tig0033134:+17798 Msa1450880:CDS
TACACAAAGGAAATTCATGG+AGG 0.749892 tig0033134:+9638 Msa1450880:CDS
ACAAAACAAACCAACCACAG+TGG 0.751123 tig0033134:-5815 Msa1450870:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAAAATAAAAATTA+GGG - tig0033134:16381-16400 Msa1450880:intergenic 0.0%
!! TAAATAAATAAATAAAAAAA+AGG - tig0033134:18024-18043 Msa1450880:intergenic 0.0%
!!! TTTATTTATTTTTTTATAAT+AGG + tig0033134:18040-18059 Msa1450880:three_prime_UTR 0.0%
!! TATATATATAATCATAAAGT+AGG - tig0033134:13301-13320 Msa1450880:intergenic 10.0%
!!! ATTTTTTTATAGAAAAATGT+TGG + tig0033134:14063-14082 Msa1450880:intron 10.0%
!! AACTTTGATAAAAATATATA+GGG - tig0033134:16150-16169 Msa1450880:intergenic 10.0%
!! AAATATTACCATTACATAAA+TGG - tig0033134:8054-8073 Msa1450880:intergenic 15.0%
!! AAAAAAATACTTGTATGTAT+AGG - tig0033134:8476-8495 Msa1450880:intergenic 15.0%
!! TGACTTTCTTAAATTATTAA+CGG - tig0033134:9272-9291 Msa1450880:intergenic 15.0%
!!! CATGTAATTTTGTAAATTTA+AGG - tig0033134:9895-9914 Msa1450880:intergenic 15.0%
!!! TTTGTTTTTACTCTAATTTT+TGG - tig0033134:9976-9995 Msa1450880:intergenic 15.0%
!!! AATCCAAATAAAAATTTGTT+AGG - tig0033134:10091-10110 Msa1450880:intergenic 15.0%
!! TTTAAAGAATTTGAAGAAAA+TGG + tig0033134:10661-10680 Msa1450880:intron 15.0%
!!! AATCAACACAAATATATTTT+CGG + tig0033134:11224-11243 Msa1450880:intron 15.0%
!! GTTATTCATATTAAGTTAAA+GGG - tig0033134:12287-12306 Msa1450880:intergenic 15.0%
!! TGTTATTCATATTAAGTTAA+AGG - tig0033134:12288-12307 Msa1450880:intergenic 15.0%
!! AAACAAAAATTGAGTATTAT+TGG - tig0033134:13268-13287 Msa1450880:intergenic 15.0%
!! ATATATACAAAATTAACAAG+TGG + tig0033134:13314-13333 Msa1450880:intron 15.0%
!! AAATATATTTGCTTAAATCT+AGG - tig0033134:13417-13436 Msa1450880:intergenic 15.0%
!! ACACTATTATTATATAACAA+TGG + tig0033134:13785-13804 Msa1450880:intron 15.0%
!! CACTATTATTATATAACAAT+GGG + tig0033134:13786-13805 Msa1450880:intron 15.0%
!!! ATTTCAATATTAGATTTTCT+TGG - tig0033134:14104-14123 Msa1450880:intergenic 15.0%
!! ATTGCAAATTTATATTATTC+AGG + tig0033134:15133-15152 Msa1450880:intron 15.0%
!! TTATTCAATGAATCTAAAAA+AGG - tig0033134:15219-15238 Msa1450880:intergenic 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG - tig0033134:15293-15312 Msa1450880:intergenic 15.0%
!! TTAAACTAGGTTATTTAAAA+TGG + tig0033134:15590-15609 Msa1450880:intron 15.0%
!!! TAAACTAGGTTATTTAAAAT+GGG + tig0033134:15591-15610 Msa1450880:intron 15.0%
!! TAATTAACCCAAATATATAA+TGG - tig0033134:15855-15874 Msa1450880:intergenic 15.0%
!! CAAAACTGTAAATATTTATA+AGG - tig0033134:15888-15907 Msa1450880:intergenic 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG + tig0033134:16075-16094 Msa1450880:intron 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG + tig0033134:16076-16095 Msa1450880:intron 15.0%
!! CAACTTTGATAAAAATATAT+AGG - tig0033134:16151-16170 Msa1450880:intergenic 15.0%
!!! CTATATATTTTTATCAAAGT+TGG + tig0033134:16149-16168 Msa1450880:intron 15.0%
!! ATAAAAATAAAAATTAGGGT+CGG - tig0033134:16377-16396 Msa1450880:intergenic 15.0%
!! TAATATTCTTTACTTAAAAC+AGG + tig0033134:16509-16528 Msa1450880:intron 15.0%
!! AATATTCTTTACTTAAAACA+GGG + tig0033134:16510-16529 Msa1450880:intron 15.0%
!!! TATTTTTTTCCCATTAATTA+TGG + tig0033134:16725-16744 Msa1450880:intron 15.0%
!! TCAAAGTAAAATAAAATCAT+AGG - tig0033134:17541-17560 Msa1450880:intergenic 15.0%
!! AATGTAACAAAAAAATTTCA+TGG - tig0033134:17585-17604 Msa1450880:intergenic 15.0%
!! AAAAATTCTTCTAAATCTAA+AGG - tig0033134:17906-17925 Msa1450880:intergenic 15.0%
!!! TTAGATTTAGAAGAATTTTT+AGG + tig0033134:17906-17925 Msa1450880:CDS 15.0%
!!! TAGATTTAGAAGAATTTTTA+GGG + tig0033134:17907-17926 Msa1450880:CDS 15.0%
!! TTTACTATTTAGATAGTATT+TGG - tig0033134:18189-18208 Msa1450880:intergenic 15.0%
!! TTAGTATGAAAAATTAGCAA+TGG + tig0033134:5929-5948 Msa1450880:intron 20.0%
!!! AATTTGTCTCTAATTTTGTT+AGG + tig0033134:5962-5981 Msa1450880:intron 20.0%
!!! GCTCAAATAAGTATTTTTTA+AGG + tig0033134:6141-6160 Msa1450880:intron 20.0%
!!! TGTTGTTATTTTATTGATCA+AGG - tig0033134:6649-6668 Msa1450880:intergenic 20.0%
!! AAAGTAATTGGATCAAATTT+GGG - tig0033134:6894-6913 Msa1450880:intergenic 20.0%
!! TTATTAAAGTACATAATTGC+AGG + tig0033134:6943-6962 Msa1450880:intron 20.0%
!! TATTAAAGTACATAATTGCA+GGG + tig0033134:6944-6963 Msa1450880:intron 20.0%
!!! TTTGACTATTAAGATTTGTT+GGG - tig0033134:7107-7126 Msa1450880:intergenic 20.0%
!!! AAAAAGAACAGCAAATTTTA+AGG + tig0033134:7212-7231 Msa1450880:CDS 20.0%
!!! AAAATATTTGCGATGTTTTT+CGG - tig0033134:7573-7592 Msa1450880:intergenic 20.0%
!!! TACGGTTTTTAAAAATATCA+AGG - tig0033134:7650-7669 Msa1450880:intergenic 20.0%
!!! ACTCTCAAATTATTTTATGT+TGG + tig0033134:7778-7797 Msa1450880:intron 20.0%
!!! ACATTTTTTGCTTATAAGTT+GGG + tig0033134:7822-7841 Msa1450880:intron 20.0%
!! TTGTATGATATAACTATTTG+TGG - tig0033134:7920-7939 Msa1450880:intergenic 20.0%
!!! TTTTTGACAAAAAGTAAAGT+TGG + tig0033134:8087-8106 Msa1450880:intron 20.0%
!! TGATATTCTTTACATAAAAC+AGG + tig0033134:8271-8290 Msa1450880:intron 20.0%
!! GATATTCTTTACATAAAACA+GGG + tig0033134:8272-8291 Msa1450880:intron 20.0%
!! AAATAGTATGTTATGTAAAG+TGG + tig0033134:8681-8700 Msa1450880:intron 20.0%
!!! ATAAACTCAATTCAAGTTTT+TGG + tig0033134:8766-8785 Msa1450880:intron 20.0%
!! GGAATATAAAGTTTCAAAAA+TGG + tig0033134:8787-8806 Msa1450880:intron 20.0%
!! AGGTATAAGATTTATATAGA+AGG + tig0033134:8947-8966 Msa1450880:intron 20.0%
!! ATAAGATTTATATAGAAGGA+TGG + tig0033134:8951-8970 Msa1450880:intron 20.0%
!! TAAGATTTATATAGAAGGAT+GGG + tig0033134:8952-8971 Msa1450880:intron 20.0%
!! ATGAAAAAGTCATAGAAATT+GGG - tig0033134:9037-9056 Msa1450880:intergenic 20.0%
!! TCTTAAATTATTAACGGTAT+CGG - tig0033134:9266-9285 Msa1450880:intergenic 20.0%
!! AAAAGTTCATGTAAAGTTAA+AGG - tig0033134:9723-9742 Msa1450880:intergenic 20.0%
!! AATTAGTATTTACCGAATAA+CGG + tig0033134:9920-9939 Msa1450880:intron 20.0%
!!! CAAATAAAAATTTGTTAGGT+TGG - tig0033134:10087-10106 Msa1450880:intergenic 20.0%
!!! CAACCTAACAAATTTTTATT+TGG + tig0033134:10085-10104 Msa1450880:intron 20.0%
!! TAACTACTCTAGTAATATAA+AGG - tig0033134:11271-11290 Msa1450880:intergenic 20.0%
!! TTATATTACTAGAGTAGTTA+AGG + tig0033134:11271-11290 Msa1450880:intron 20.0%
!!! ACTGAAATTTTCAATGATAA+AGG - tig0033134:11389-11408 Msa1450880:intergenic 20.0%
!! TAGGAATTATAAGAAGTAAA+AGG - tig0033134:11893-11912 Msa1450880:intergenic 20.0%
!! TCTATAAATGAGTAAAATGT+TGG + tig0033134:12028-12047 Msa1450880:intron 20.0%
!! ATATGAATAACAAACAATGT+TGG + tig0033134:12296-12315 Msa1450880:intron 20.0%
!! AAAGTTGTAAGTAAAATCTT+AGG + tig0033134:12461-12480 Msa1450880:intron 20.0%
!! AAGTTGTAAGTAAAATCTTA+GGG + tig0033134:12462-12481 Msa1450880:intron 20.0%
!! ATTCATGAATTACAAAGATT+TGG - tig0033134:12962-12981 Msa1450880:intergenic 20.0%
!!! TAATCATAAAGTAGGAATTT+TGG - tig0033134:13293-13312 Msa1450880:intergenic 20.0%
!!! GTTTGTTGATTTTTATTCAA+TGG + tig0033134:13865-13884 Msa1450880:intron 20.0%
!! AATGTTCACATAATGATAAA+GGG - tig0033134:13941-13960 Msa1450880:intergenic 20.0%
!! AAATGTTCACATAATGATAA+AGG - tig0033134:13942-13961 Msa1450880:intergenic 20.0%
!! TTGTGACATATAATTGATAT+AGG + tig0033134:14008-14027 Msa1450880:intron 20.0%
!!! TTTTTAAAGTACATAATTGC+AGG + tig0033134:14126-14145 Msa1450880:intron 20.0%
!! ATTTAAGAAGAAAATCTTCT+TGG - tig0033134:14191-14210 Msa1450880:intergenic 20.0%
!! GATAAAAAGAAGTTATGTTT+AGG - tig0033134:14680-14699 Msa1450880:intergenic 20.0%
!! GAAGTAGTATATAAATAGAA+AGG - tig0033134:14702-14721 Msa1450880:intergenic 20.0%
!!! TCTATAAGCTTTTCTATTAT+AGG - tig0033134:14828-14847 Msa1450880:intergenic 20.0%
!! TTATAGAAAATAAGCTTAGA+TGG + tig0033134:14841-14860 Msa1450880:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG + tig0033134:15303-15322 Msa1450880:intron 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG - tig0033134:15424-15443 Msa1450880:intergenic 20.0%
!!! ATAGTACACATTTTTAAACT+AGG + tig0033134:15577-15596 Msa1450880:intron 20.0%
!!! AGACATTGAAAAGTTTTATA+AGG + tig0033134:15650-15669 Msa1450880:intron 20.0%
!! AATAACCACCATTATATATT+TGG + tig0033134:15844-15863 Msa1450880:intron 20.0%
!! ATAACCACCATTATATATTT+GGG + tig0033134:15845-15864 Msa1450880:intron 20.0%
!!! ACATTTTCTTTAAGCATTTT+AGG + tig0033134:15952-15971 Msa1450880:intron 20.0%
!!! CATTTTCTTTAAGCATTTTA+GGG + tig0033134:15953-15972 Msa1450880:intron 20.0%
!! ACAAAATTCTGAATATTTGT+AGG + tig0033134:16106-16125 Msa1450880:intron 20.0%
!! CAAAATTCTGAATATTTGTA+GGG + tig0033134:16107-16126 Msa1450880:intron 20.0%
!! TATAGGGTTAATTAAGTAAA+TGG - tig0033134:16134-16153 Msa1450880:intergenic 20.0%
!! ATGTTACATTAGAAAATGAT+TGG + tig0033134:16680-16699 Msa1450880:CDS 20.0%
!! CAAATTCATCCATAATTAAT+GGG - tig0033134:16737-16756 Msa1450880:intergenic 20.0%
!! ACAAATTCATCCATAATTAA+TGG - tig0033134:16738-16757 Msa1450880:intergenic 20.0%
!!! ATTCCTTTGATGTTAATTTT+AGG - tig0033134:16761-16780 Msa1450880:intergenic 20.0%
!! GTTAAGAGTTAGTTATATAT+CGG - tig0033134:17208-17227 Msa1450880:intergenic 20.0%
!! AGTTAGTGAAAAATACATTA+TGG + tig0033134:17313-17332 Msa1450880:CDS 20.0%
!! TATGAAAAAATCATGGTAAT+TGG - tig0033134:17369-17388 Msa1450880:intergenic 20.0%
!!! GATTTTATTTTACTTTGACT+TGG + tig0033134:17543-17562 Msa1450880:intron 20.0%
! AAACATATCTTAAACTCTTC+TGG + tig0033134:5728-5747 Msa1450880:CDS 25.0%
! AACATATCTTAAACTCTTCT+GGG + tig0033134:5729-5748 Msa1450880:CDS 25.0%
! AACATATAACACAACTAATG+AGG - tig0033134:6080-6099 Msa1450880:intergenic 25.0%
! TTTATGTATTATCAACACCA+TGG + tig0033134:6098-6117 Msa1450880:intron 25.0%
! TTAAGTCATAAATTGAACCA+AGG - tig0033134:6185-6204 Msa1450880:intergenic 25.0%
! AGTCTCTTTCACTTAAATAT+CGG + tig0033134:6258-6277 Msa1450880:intron 25.0%
! TATCAAAAAGAACATGTGTT+GGG - tig0033134:6557-6576 Msa1450880:intergenic 25.0%
! CAATAAAAAGAACATGTGTT+GGG - tig0033134:6712-6731 Msa1450880:intergenic 25.0%
! TCAATAAAAAGAACATGTGT+TGG - tig0033134:6713-6732 Msa1450880:intergenic 25.0%
! ATATGTTGTGACATAATTCT+AGG + tig0033134:6867-6886 Msa1450880:intron 25.0%
! CAAAGTAATTGGATCAAATT+TGG - tig0033134:6895-6914 Msa1450880:intergenic 25.0%
! TAGTTTCTTGTCAAAGTAAT+TGG - tig0033134:6906-6925 Msa1450880:intergenic 25.0%
! GTTTGACTATTAAGATTTGT+TGG - tig0033134:7108-7127 Msa1450880:intergenic 25.0%
!!! AAATTTTAAGGTTGTGATTG+TGG + tig0033134:7224-7243 Msa1450880:CDS 25.0%
!! AAATGTATGTGGAAAAGTAT+AGG + tig0033134:7253-7272 Msa1450880:CDS 25.0%
! TTATGTTTGATTGTGAAGAT+AGG + tig0033134:7364-7383 Msa1450880:CDS 25.0%
!!! AAATTAGCCTTATGAATAAC+AGG - tig0033134:7390-7409 Msa1450880:intergenic 25.0%
!! ATTCATAAGGCTAATTTTCA+AGG + tig0033134:7393-7412 Msa1450880:CDS 25.0%
! TCTGAACAATATCTAAACAA+AGG - tig0033134:7438-7457 Msa1450880:intergenic 25.0%
! TTAGATATTGTTCAGATCAA+TGG + tig0033134:7442-7461 Msa1450880:CDS 25.0%
! ATCTCATTCTACAAATAGAA+AGG - tig0033134:7537-7556 Msa1450880:intergenic 25.0%
! TTCTCAACTACATTGTAAAA+TGG + tig0033134:7604-7623 Msa1450880:intron 25.0%
!!! GGTTTTTAAAAATATCAAGG+AGG - tig0033134:7647-7666 Msa1450880:intergenic 25.0%
!!! GATATTTTTAAAAACCGTAC+CGG + tig0033134:7651-7670 Msa1450880:intron 25.0%
!!! ATATTTTTAAAAACCGTACC+GGG + tig0033134:7652-7671 Msa1450880:intron 25.0%
! TCAAAGAACTGAAACAAAAA+CGG - tig0033134:7685-7704 Msa1450880:intergenic 25.0%
!!! CTCAAATTATTTTATGTTGG+AGG + tig0033134:7781-7800 Msa1450880:intron 25.0%
!!! CACATTTTTTGCTTATAAGT+TGG + tig0033134:7821-7840 Msa1450880:intron 25.0%
! AACCTAATAAAATGACAACA+TGG - tig0033134:7881-7900 Msa1450880:intergenic 25.0%
! TGTATATATGTTTGTGTCAT+AGG + tig0033134:8553-8572 Msa1450880:intron 25.0%
! AGTGATATTGTATTACCTAT+GGG - tig0033134:8636-8655 Msa1450880:intergenic 25.0%
! AAGTGATATTGTATTACCTA+TGG - tig0033134:8637-8656 Msa1450880:intergenic 25.0%
!!! AAGTTGATTTTTGAGTTTGT+CGG + tig0033134:8736-8755 Msa1450880:intron 25.0%
! CAACAATGCACATAAAATTA+AGG - tig0033134:8923-8942 Msa1450880:intergenic 25.0%
!! CTTAATTTTATGTGCATTGT+TGG + tig0033134:8921-8940 Msa1450880:CDS 25.0%
! AGTTAGTGAGAAATACATTA+TGG + tig0033134:8982-9001 Msa1450880:intron 25.0%
! GATGAAAAAGTCATAGAAAT+TGG - tig0033134:9038-9057 Msa1450880:intergenic 25.0%
! CATTTACTATTATCCCTAAT+TGG - tig0033134:9091-9110 Msa1450880:intergenic 25.0%
!!! AATAAAGTCATGTTTGTTGT+TGG - tig0033134:9177-9196 Msa1450880:intergenic 25.0%
!! AACATGACTTTATTTGATTG+TGG + tig0033134:9183-9202 Msa1450880:intron 25.0%
! ATATCTTACATTCCCTAAAA+TGG + tig0033134:9429-9448 Msa1450880:intron 25.0%
! TGTAAAGTTAAAGGATCATA+TGG - tig0033134:9714-9733 Msa1450880:intergenic 25.0%
! AAATTTGGGAAGATGAATAT+TGG + tig0033134:9775-9794 Msa1450880:intron 25.0%
!! TATTGGCTGAATAAAAAGAA+TGG + tig0033134:9792-9811 Msa1450880:intron 25.0%
! AAAAAGAATGGACAATAGTA+TGG + tig0033134:9804-9823 Msa1450880:intron 25.0%
!! TGTATGATTTTTCCGTTATT+CGG - tig0033134:9935-9954 Msa1450880:intergenic 25.0%
! TAAAATGCTTCTGCATAAAA+AGG - tig0033134:10055-10074 Msa1450880:intergenic 25.0%
! TTTGATAAAATCAAAGCTCA+TGG + tig0033134:10132-10151 Msa1450880:intron 25.0%
!!! TTTTGAGAGACTATTTTTTG+TGG + tig0033134:10208-10227 Msa1450880:intron 25.0%
! TTTGAAGAAAATGGAATAAG+CGG - tig0033134:10324-10343 Msa1450880:intergenic 25.0%
!! TACACTTGATTTGAAGAAAA+TGG - tig0033134:10333-10352 Msa1450880:intergenic 25.0%
!!! CTCTTTTTCATATATGCAAT+GGG - tig0033134:10373-10392 Msa1450880:intergenic 25.0%
!!! TCTCTTTTTCATATATGCAA+TGG - tig0033134:10374-10393 Msa1450880:intergenic 25.0%
! AAAAAGAGAGAAAATCTTGA+AGG + tig0033134:10385-10404 Msa1450880:intron 25.0%
! ATTAAGCAACATTGATGAAT+AGG - tig0033134:10566-10585 Msa1450880:intergenic 25.0%
! AATAAAATTGAGAGAGACAA+AGG + tig0033134:10594-10613 Msa1450880:intron 25.0%
!!! TTTTTAGTGACTATGCTTAT+GGG - tig0033134:10750-10769 Msa1450880:intergenic 25.0%
!!! TTTTTTAGTGACTATGCTTA+TGG - tig0033134:10751-10770 Msa1450880:intergenic 25.0%
! TAGTTCAAATGAAAATGTGA+TGG + tig0033134:10869-10888 Msa1450880:intron 25.0%
! TCTAATCACTTGGTAAAAAA+AGG + tig0033134:11329-11348 Msa1450880:intron 25.0%
! ATTGAAAATTTCAGTTCTTC+AGG + tig0033134:11394-11413 Msa1450880:intron 25.0%
! ATTGAGACAGAAAATTGATA+TGG + tig0033134:11619-11638 Msa1450880:intron 25.0%
! TTGAGACAGAAAATTGATAT+GGG + tig0033134:11620-11639 Msa1450880:intron 25.0%
! TAGATTTACTTTCTATGGTT+TGG + tig0033134:12140-12159 Msa1450880:intron 25.0%
! TAAGAGAAAGTAACAAAGAA+AGG - tig0033134:12530-12549 Msa1450880:intergenic 25.0%
! TATAAAGGAATGAAAGTGAA+TGG - tig0033134:12583-12602 Msa1450880:intergenic 25.0%
!! TGAAAGGAAAGAAAGTATAA+AGG - tig0033134:12598-12617 Msa1450880:intergenic 25.0%
! AGTTTGGTCAATTATGTATT+GGG - tig0033134:12752-12771 Msa1450880:intergenic 25.0%
! GTCAAAAAAAGATTTGGATT+AGG - tig0033134:12929-12948 Msa1450880:intergenic 25.0%
! GAATTACAAAGATTTGGATT+AGG - tig0033134:12956-12975 Msa1450880:intergenic 25.0%
! TTCAAATCAACAATCAAGAT+TGG - tig0033134:13013-13032 Msa1450880:intergenic 25.0%
! GTTGTATAATCTTAAATTGG+CGG - tig0033134:13087-13106 Msa1450880:intergenic 25.0%
! TCGGTTGTATAATCTTAAAT+TGG - tig0033134:13090-13109 Msa1450880:intergenic 25.0%
! ATATTTGCTTAAATCTAGGA+AGG - tig0033134:13413-13432 Msa1450880:intergenic 25.0%
!!! AAATGCCAATAGTTCTAATT+TGG - tig0033134:13971-13990 Msa1450880:intergenic 25.0%
! GACATATAATTGATATAGGA+AGG + tig0033134:14012-14031 Msa1450880:intron 25.0%
! TTTCTTCTTAAATGCATACA+AGG + tig0033134:14198-14217 Msa1450880:CDS 25.0%
! TCTGAACAATATCTAAACAA+AGG - tig0033134:7438-7457 Msa1450880:intergenic 25.0%
!! ACATAGTTCTATATTTAGAG+AGG - tig0033134:14724-14743 Msa1450880:intergenic 25.0%
! AGACTAGACAAAATAGAATT+AGG + tig0033134:14770-14789 Msa1450880:intron 25.0%
! AAAATAAGCTTAGATGGTTT+GGG + tig0033134:14847-14866 Msa1450880:intron 25.0%
!! GTTTATCTTATAGTTTTCGT+AGG - tig0033134:14957-14976 Msa1450880:intergenic 25.0%
! AACCATTAGAAATGATTTAG+AGG + tig0033134:14974-14993 Msa1450880:intron 25.0%
!! AAGTCTTATCTCACTAAATA+GGG - tig0033134:15067-15086 Msa1450880:intergenic 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG - tig0033134:15194-15213 Msa1450880:intergenic 25.0%
! CATTGAGTAGTTAATGTATT+TGG - tig0033134:15268-15287 Msa1450880:intergenic 25.0%
! TAAAAAAATATTACTCCCTC+CGG - tig0033134:15325-15344 Msa1450880:intergenic 25.0%
!!! GAAAAGTTTTATAAGGAGAA+AGG + tig0033134:15657-15676 Msa1450880:intron 25.0%
! TTAACCCAAATATATAATGG+TGG - tig0033134:15852-15871 Msa1450880:intergenic 25.0%
!! AAAGATTTCCATCAACATTT+TGG - tig0033134:15980-15999 Msa1450880:intergenic 25.0%
!! AATTTTTCCATCAGCATTTT+TGG - tig0033134:16011-16030 Msa1450880:intergenic 25.0%
!! TGCTGATGGAAAAATTTTAT+AGG + tig0033134:16015-16034 Msa1450880:intron 25.0%
!! GCTGATGGAAAAATTTTATA+GGG + tig0033134:16016-16035 Msa1450880:intron 25.0%
!! ATGCTGATGGAAAATTTTAT+AGG + tig0033134:16046-16065 Msa1450880:intron 25.0%
!! TGCTGATGGAAAATTTTATA+GGG + tig0033134:16047-16066 Msa1450880:intron 25.0%
! TTCATCATAACATTTGCTTT+AGG + tig0033134:16334-16353 Msa1450880:intron 25.0%
! TTTAGGCATTAAAACATGTT+GGG + tig0033134:16351-16370 Msa1450880:intron 25.0%
! AAGTGTAGAATAATAGAAAG+GGG - tig0033134:16482-16501 Msa1450880:intergenic 25.0%
! GAAGTGTAGAATAATAGAAA+GGG - tig0033134:16483-16502 Msa1450880:intergenic 25.0%
!! AGAAGTGTAGAATAATAGAA+AGG - tig0033134:16484-16503 Msa1450880:intergenic 25.0%
!!! ACTTTAAGGATATTTTTCCA+TGG - tig0033134:16553-16572 Msa1450880:intergenic 25.0%
! ATCCTTAAAGTCATAAATGA+AGG + tig0033134:16562-16581 Msa1450880:CDS 25.0%
! TCCTTAAAGTCATAAATGAA+GGG + tig0033134:16563-16582 Msa1450880:CDS 25.0%
! TGTCCTAAAATTAACATCAA+AGG + tig0033134:16755-16774 Msa1450880:intron 25.0%
!!! ATTGTGTATATTTTGATGAC+AGG + tig0033134:16824-16843 Msa1450880:intron 25.0%
! ACTCTTAACATACACATATA+TGG + tig0033134:17219-17238 Msa1450880:intron 25.0%
! CTCTTAACATACACATATAT+GGG + tig0033134:17220-17239 Msa1450880:intron 25.0%
! TCTTAACATACACATATATG+GGG + tig0033134:17221-17240 Msa1450880:intron 25.0%
!!! TACCATGATTTTTTCATAAG+AGG + tig0033134:17371-17390 Msa1450880:CDS 25.0%
! CATTTACTATTGTCTCTAAT+AGG - tig0033134:17422-17441 Msa1450880:intergenic 25.0%
! ATTCCCTTAAAATATCTAAC+AGG + tig0033134:17614-17633 Msa1450880:intron 25.0%
!! TCACATGTCATTAATTTTTC+AGG - tig0033134:17789-17808 Msa1450880:intergenic 25.0%
! ATTAATGACATGTGATGTAA+TGG + tig0033134:17794-17813 Msa1450880:CDS 25.0%
! TTAATGACATGTGATGTAAT+GGG + tig0033134:17795-17814 Msa1450880:CDS 25.0%
! TCTAAATCTAAAGGATCATA+TGG - tig0033134:17897-17916 Msa1450880:intergenic 25.0%
! AAAAGCTAATTCAATAATGC+AGG + tig0033134:17932-17951 Msa1450880:CDS 25.0%
! AATAATGCAGGTAGAAATTT+GGG + tig0033134:17944-17963 Msa1450880:CDS 25.0%
! AAATTTGGGAAGATGAATAT+TGG + tig0033134:9775-9794 Msa1450880:intron 25.0%
!!! TCATCCTTTAGGATAAAAAA+GGG - tig0033134:18097-18116 Msa1450880:intergenic 25.0%
!!! ATCATCCTTTAGGATAAAAA+AGG - tig0033134:18098-18117 Msa1450880:intergenic 25.0%
! ATATACACTTATCATCCTTT+AGG - tig0033134:18108-18127 Msa1450880:intergenic 25.0%
!!! TTTGATAGTTGATAGACATT+TGG + tig0033134:18155-18174 Msa1450880:three_prime_UTR 25.0%
! GTATATATGAAAGAGAGTGT+TGG - tig0033134:5621-5640 None:intergenic 30.0%
!! CTCTAACTTTTGCTATATGA+GGG - tig0033134:5672-5691 None:intergenic 30.0%
!! TCTCTAACTTTTGCTATATG+AGG - tig0033134:5673-5692 None:intergenic 30.0%
ATTCAACTCAAACATGAACA+AGG + tig0033134:5699-5718 Msa1450880:exon 30.0%
ACATATCTTAAACTCTTCTG+GGG + tig0033134:5730-5749 Msa1450880:CDS 30.0%
! TATTGTAACTTTAGCCTTCT+TGG - tig0033134:5788-5807 Msa1450880:intergenic 30.0%
GAGTGATTCAAAATTCTACT+CGG - tig0033134:6237-6256 Msa1450880:intergenic 30.0%
TTCAAAATTTCTTCGAGTCA+TGG - tig0033134:6305-6324 Msa1450880:intergenic 30.0%
!! CTTATGTTTTTACACAAGAC+AGG - tig0033134:6447-6466 Msa1450880:intergenic 30.0%
CTGTCTTGTGTAAAAACATA+AGG + tig0033134:6445-6464 Msa1450880:intron 30.0%
ACAACACTAAACTAAGTGTT+TGG + tig0033134:6508-6527 Msa1450880:intron 30.0%
CTATCAAAAAGAACATGTGT+TGG - tig0033134:6558-6577 Msa1450880:intergenic 30.0%
ACAACACTAAACTAAGTGTT+TGG + tig0033134:6508-6527 Msa1450880:intron 30.0%
TATGACATGATCATTGATCA+AGG - tig0033134:6810-6829 Msa1450880:intergenic 30.0%
TAATGCTAATAGTTACAACG+TGG - tig0033134:6843-6862 Msa1450880:intergenic 30.0%
!!! TGGATGAAAGGTTTTGATTT+GGG - tig0033134:6978-6997 Msa1450880:intergenic 30.0%
!!! ATGGATGAAAGGTTTTGATT+TGG - tig0033134:6979-6998 Msa1450880:intergenic 30.0%
!!! TTTCTCAGTTTTTTCTCCAT+TGG - tig0033134:7049-7068 Msa1450880:intergenic 30.0%
! TTGTTGGGTTATGTTTTGTA+GGG - tig0033134:7092-7111 Msa1450880:intergenic 30.0%
! TTTGTTGGGTTATGTTTTGT+AGG - tig0033134:7093-7112 Msa1450880:intergenic 30.0%
! TCCATGAAGATTTAAAACCA+TGG + tig0033134:7151-7170 Msa1450880:CDS 30.0%
!!! TCCATGGTTTTAAATCTTCA+TGG - tig0033134:7155-7174 Msa1450880:intergenic 30.0%
TTAAAACCATGGAGAGAAAA+AGG + tig0033134:7162-7181 Msa1450880:CDS 30.0%
TAAAACCATGGAGAGAAAAA+GGG + tig0033134:7163-7182 Msa1450880:CDS 30.0%
AAGAGATGTGTTTACTTTGT+GGG + tig0033134:7290-7309 Msa1450880:CDS 30.0%
TCAAACATAAGTTCCAAATC+AGG - tig0033134:7354-7373 Msa1450880:intergenic 30.0%
GAACAATATCTAAACAAAGG+TGG - tig0033134:7435-7454 Msa1450880:intergenic 30.0%
TTTCAGTTCTTTGACTCATT+CGG + tig0033134:7691-7710 Msa1450880:intron 30.0%
!!! TTTTTTGCTTATAAGTTGGG+AGG + tig0033134:7825-7844 Msa1450880:intron 30.0%
!! TTTTTGCTTATAAGTTGGGA+GGG + tig0033134:7826-7845 Msa1450880:intron 30.0%
! ACAACATGGCATGATTTTAT+TGG - tig0033134:7867-7886 Msa1450880:intergenic 30.0%
!!! TGCCATGTTGTCATTTTATT+AGG + tig0033134:7876-7895 Msa1450880:intron 30.0%
!! ACTTGCACACTATTTTAAAG+AGG - tig0033134:7949-7968 Msa1450880:intergenic 30.0%
TTAAAATAGTGTGCAAGTGA+TGG + tig0033134:7951-7970 Msa1450880:intron 30.0%
AATTTGAAAAGATAAGAGCG+TGG - tig0033134:8017-8036 Msa1450880:intergenic 30.0%
!!! TCTTTAAGGGTATTTTTCCA+TGG - tig0033134:8315-8334 Msa1450880:intergenic 30.0%
ACCCTTAAAGAGATAAAAGA+AGG + tig0033134:8324-8343 Msa1450880:CDS 30.0%
! CCCTTCTTTTATCTCTTTAA+GGG - tig0033134:8328-8347 Msa1450880:intergenic 30.0%
CCCTTAAAGAGATAAAAGAA+GGG + tig0033134:8325-8344 Msa1450880:CDS 30.0%
! TCCCTTCTTTTATCTCTTTA+AGG - tig0033134:8329-8348 Msa1450880:intergenic 30.0%
ATGTAGCATTGCATTTCAAA+AGG - tig0033134:8431-8450 Msa1450880:intergenic 30.0%
ATGCTACATCAAAAGATGAT+TGG + tig0033134:8442-8461 Msa1450880:CDS 30.0%
GTTACAAGAAATCAAGCTTA+GGG + tig0033134:8600-8619 Msa1450880:CDS 30.0%
!!! TTCTATGACTTTTTCATCAG+AGG + tig0033134:9040-9059 Msa1450880:intron 30.0%
!! TCTTAAATTTGCTGTGGATT+GGG + tig0033134:9117-9136 Msa1450880:intron 30.0%
TTCAGCGTAATTATATGTGT+TGG + tig0033134:9297-9316 Msa1450880:intron 30.0%
TTTAAACCAACTATACCTCA+AGG + tig0033134:9570-9589 Msa1450880:CDS 30.0%
AAAGTTAAAGGATCATATGG+AGG - tig0033134:9711-9730 Msa1450880:intergenic 30.0%
AAAAGCTAATTCAACAAGAC+AGG + tig0033134:9749-9768 Msa1450880:CDS 30.0%
AACAAGACAGGTAGAAATTT+GGG + tig0033134:9761-9780 Msa1450880:intron 30.0%
!!! TGGCTTAGTTGTTACTTTTT+TGG + tig0033134:9824-9843 Msa1450880:intron 30.0%
TTATTGTCACACACATGTAT+CGG - tig0033134:10019-10038 Msa1450880:intergenic 30.0%
ACAAAGGAAAACAATGACAT+TGG + tig0033134:10610-10629 Msa1450880:intron 30.0%
CTTTAAATCAAGTGCAACAA+TGG - tig0033134:10648-10667 Msa1450880:intergenic 30.0%
TTTGAAGAAAATGGAAGAAG+TGG + tig0033134:10670-10689 Msa1450880:intron 30.0%
! TTTTAGTGACTATGCTTATG+GGG - tig0033134:10749-10768 Msa1450880:intergenic 30.0%
!!! ACTCAAATTGCTTTTTGAAG+AGG - tig0033134:10846-10865 Msa1450880:intergenic 30.0%
TTGCTAAAACAGGGTAATTA+AGG + tig0033134:10892-10911 Msa1450880:intron 30.0%
AAACAGGGTAATTAAGGTTT+AGG + tig0033134:10898-10917 Msa1450880:intron 30.0%
! TCTATTGACTAAGTATACGT+TGG + tig0033134:10984-11003 Msa1450880:intron 30.0%
AGTAGTTAAGGAACATACAA+CGG + tig0033134:11283-11302 Msa1450880:intron 30.0%
TTGATTGAGTCTTAGCAATA+TGG + tig0033134:11450-11469 Msa1450880:intron 30.0%
ATTCTTGATGCTAATGATGA+TGG - tig0033134:11481-11500 Msa1450880:intergenic 30.0%
ATCATTAGCATCAAGAATGT+CGG + tig0033134:11483-11502 Msa1450880:intron 30.0%
!! AATGTTTTTAAAGGCTCCTT+AGG - tig0033134:11520-11539 Msa1450880:intergenic 30.0%
! AAGGAGCCTTTAAAAACATT+AGG + tig0033134:11520-11539 Msa1450880:intron 30.0%
!! GGCATTCCTAATGTTTTTAA+AGG - tig0033134:11529-11548 Msa1450880:intergenic 30.0%
ATTAGGAATGCCAATATCAA+TGG + tig0033134:11537-11556 Msa1450880:intron 30.0%
TGAGACAGAAAATTGATATG+GGG + tig0033134:11621-11640 Msa1450880:intron 30.0%
!! CTAATTGTGTAGGTATTGAT+TGG - tig0033134:11868-11887 Msa1450880:intergenic 30.0%
!! GTAAAAGGTACTAATTGTGT+AGG - tig0033134:11878-11897 Msa1450880:intergenic 30.0%
TTAGCCATGACAAAAATACT+AGG - tig0033134:11917-11936 Msa1450880:intergenic 30.0%
!! TTAGGTTATGTTTGGTTCTA+GGG + tig0033134:12085-12104 Msa1450880:intron 30.0%
GTGGATAGATTTACTTTCTA+TGG + tig0033134:12135-12154 Msa1450880:intron 30.0%
! AGAGGAAATAATCTTTTTGC+TGG + tig0033134:12179-12198 Msa1450880:intron 30.0%
! GAGGAAATAATCTTTTTGCT+GGG + tig0033134:12180-12199 Msa1450880:intron 30.0%
! GAAAGGATTTTGTAGTTGTT+TGG - tig0033134:12555-12574 Msa1450880:intergenic 30.0%
TGTTTGGATCACAAAAGAAA+GGG - tig0033134:12634-12653 Msa1450880:intergenic 30.0%
GTTTGGTCAATTATGTATTG+GGG - tig0033134:12751-12770 Msa1450880:intergenic 30.0%
CAGTTTGGTCAATTATGTAT+TGG - tig0033134:12753-12772 Msa1450880:intergenic 30.0%
GAAATGCAAATCGTAAATGA+TGG - tig0033134:12798-12817 Msa1450880:intergenic 30.0%
GGTTCTGTCAAAAAAAGATT+TGG - tig0033134:12935-12954 Msa1450880:intergenic 30.0%
TCGCTTCATAAAATTGTGTT+CGG - tig0033134:13053-13072 Msa1450880:intergenic 30.0%
! CACAATTTTATGAAGCGAAA+CGG + tig0033134:13055-13074 Msa1450880:intron 30.0%
! ATAATCTTAAATTGGCGGAT+GGG - tig0033134:13082-13101 Msa1450880:intergenic 30.0%
TATAATCTTAAATTGGCGGA+TGG - tig0033134:13083-13102 Msa1450880:intergenic 30.0%
AGAAATGGACATTCAATACA+AGG - tig0033134:13181-13200 Msa1450880:intergenic 30.0%
TCTGTCATTGTATTAACCAA+GGG - tig0033134:13207-13226 Msa1450880:intergenic 30.0%
TGAGTATTATTGGATGCTTA+TGG - tig0033134:13258-13277 Msa1450880:intergenic 30.0%
TTTAAACATGAAACATGACG+TGG + tig0033134:13434-13453 Msa1450880:intron 30.0%
CTATGGATGTACAATGAATA+TGG - tig0033134:13461-13480 Msa1450880:intergenic 30.0%
ACATGAGAAACTCAAAAACT+TGG - tig0033134:13494-13513 Msa1450880:intergenic 30.0%
! ACATATCTGAAACACTTCTA+TGG + tig0033134:13561-13580 Msa1450880:intron 30.0%
TGACACCAAATTAGAACTAT+TGG + tig0033134:13963-13982 Msa1450880:intron 30.0%
! TTGTTGGGTTATGTTTTGTA+GGG - tig0033134:7092-7111 Msa1450880:intergenic 30.0%
! TTTGTTGGGTTATGTTTTGT+AGG - tig0033134:7093-7112 Msa1450880:intergenic 30.0%
TAAAACCATGGAGAGAAAAA+GGG + tig0033134:7163-7182 Msa1450880:CDS 30.0%
! AGATGTATGTGGAAAAGTAT+AGG + tig0033134:14418-14437 Msa1450880:CDS 30.0%
AAGAGATGTGTTTACTTTGT+GGG + tig0033134:7290-7309 Msa1450880:CDS 30.0%
TCAAACATAAGTTCCAAATC+AGG - tig0033134:7354-7373 Msa1450880:intergenic 30.0%
GAACAATATCTAAACAAAGG+AGG - tig0033134:7435-7454 Msa1450880:intergenic 30.0%
TAGATATTGTCTTTCCAGAT+TGG + tig0033134:14634-14653 Msa1450880:CDS 30.0%
ACTATGTTTAAATGTTGCGT+TGG + tig0033134:14737-14756 Msa1450880:intron 30.0%
GAAAATAAGCTTAGATGGTT+TGG + tig0033134:14846-14865 Msa1450880:intron 30.0%
GACCTCTAAATCATTTCTAA+TGG - tig0033134:14979-14998 Msa1450880:intergenic 30.0%
! CAAGTCTTATCTCACTAAAT+AGG - tig0033134:15068-15087 Msa1450880:intergenic 30.0%
CTATTTAGTGAGATAAGACT+TGG + tig0033134:15066-15085 Msa1450880:intron 30.0%
CTACTCAATGAACCTAAAAA+AGG + tig0033134:15278-15297 Msa1450880:intron 30.0%
CTAGGTCATATATTAAGAGA+CGG - tig0033134:15383-15402 Msa1450880:intergenic 30.0%
! CTAGGTTATTTAAAATGGGA+CGG + tig0033134:15595-15614 Msa1450880:intron 30.0%
!! TTTTATAAGGAGAAAGGTAC+TGG + tig0033134:15663-15682 Msa1450880:intron 30.0%
AAATTATTGCATGACTAGTG+GGG - tig0033134:15753-15772 Msa1450880:intergenic 30.0%
CAAATTATTGCATGACTAGT+GGG - tig0033134:15754-15773 Msa1450880:intergenic 30.0%
TCAAATTATTGCATGACTAG+TGG - tig0033134:15755-15774 Msa1450880:intergenic 30.0%
!! TTTTAAGGGAGAACTAACTA+GGG - tig0033134:15808-15827 Msa1450880:intergenic 30.0%
!! TTTTTAAGGGAGAACTAACT+AGG - tig0033134:15809-15828 Msa1450880:intergenic 30.0%
!! ATTTTTATCAAAGTTGGCCT+TGG + tig0033134:16155-16174 Msa1450880:intron 30.0%
!!! TTTTTATCAAAGTTGGCCTT+GGG + tig0033134:16156-16175 Msa1450880:intron 30.0%
! GATGTTCTAGTTAGAGATTT+AGG + tig0033134:16183-16202 Msa1450880:intron 30.0%
CTTTAGGCATTAAAACATGT+TGG + tig0033134:16350-16369 Msa1450880:intron 30.0%
AGTGTAGAATAATAGAAAGG+GGG - tig0033134:16481-16500 Msa1450880:intergenic 30.0%
TCCCTTCATTTATGACTTTA+AGG - tig0033134:16567-16586 Msa1450880:intergenic 30.0%
! ATAGAGTACCTTATGCTTAT+TGG + tig0033134:16608-16627 Msa1450880:CDS 30.0%
ATGTAACATTGCATTGTAGA+AGG - tig0033134:16669-16688 Msa1450880:intergenic 30.0%
GTTTCAACAAATCCAACTTA+GGG + tig0033134:16871-16890 Msa1450880:CDS 30.0%
TTTCAACAAATCCAACTTAG+GGG + tig0033134:16872-16891 Msa1450880:CDS 30.0%
GCAAAAATATCTTGAGTGAA+AGG + tig0033134:16920-16939 Msa1450880:intron 30.0%
CTTAACATACACATATATGG+GGG + tig0033134:17222-17241 Msa1450880:intron 30.0%
AGGTACAAGATATACATAGA+AGG + tig0033134:17278-17297 Msa1450880:intron 30.0%
ACAAGATATACATAGAAGGA+TGG + tig0033134:17282-17301 Msa1450880:CDS 30.0%
CAAGATATACATAGAAGGAT+GGG + tig0033134:17283-17302 Msa1450880:CDS 30.0%
GGACTTTACATATAATGTCA+TGG - tig0033134:17348-17367 Msa1450880:intergenic 30.0%
TGCCTCTTATGAAAAAATCA+TGG - tig0033134:17376-17395 Msa1450880:intergenic 30.0%
!!! TGATTTTTTCATAAGAGGCA+TGG + tig0033134:17376-17395 Msa1450880:CDS 30.0%
ATAGGCCAATAATGTTGTAA+GGG - tig0033134:17404-17423 Msa1450880:intergenic 30.0%
AATAGGCCAATAATGTTGTA+AGG - tig0033134:17405-17424 Msa1450880:intergenic 30.0%
!! TCTTAAATTTGCTGTGGAAT+GGG + tig0033134:17448-17467 Msa1450880:CDS 30.0%
!! GTGCCTGTTAGATATTTTAA+GGG - tig0033134:17620-17639 Msa1450880:intergenic 30.0%
! TGTGCCTGTTAGATATTTTA+AGG - tig0033134:17621-17640 Msa1450880:intergenic 30.0%
AAATCTAAAGGATCATATGG+AGG - tig0033134:17894-17913 Msa1450880:intergenic 30.0%
CAATAATGCAGGTAGAAATT+TGG + tig0033134:17943-17962 Msa1450880:CDS 30.0%
ATATTGGCAGAGTAAAAACA+AGG + tig0033134:17974-17993 Msa1450880:CDS 30.0%
TATTGGCAGAGTAAAAACAA+GGG + tig0033134:17975-17994 Msa1450880:CDS 30.0%
!!! AGTTCCCTTTTTTATCCTAA+AGG + tig0033134:18090-18109 Msa1450880:intron 30.0%
!!! TTGCTCTAAGATTTTATGAC+AGG + tig0033134:18132-18151 Msa1450880:three_prime_UTR 30.0%
!! TATGAAAGAGAGTGTTGGAA+GGG - tig0033134:5616-5635 None:intergenic 35.0%
!! ATATGAAAGAGAGTGTTGGA+AGG - tig0033134:5617-5636 None:intergenic 35.0%
TGCTGCAAAATCACAAAAAG+TGG - tig0033134:5848-5867 Msa1450880:intergenic 35.0%
! CTTTTTGTGATTTTGCAGCA+TGG + tig0033134:5848-5867 Msa1450880:CDS 35.0%
! AAATTGAACCAAGGTGTTCT+TGG - tig0033134:6176-6195 Msa1450880:intergenic 35.0%
!!! TGAAAGGTTTTGATTTGGGA+TGG - tig0033134:6974-6993 Msa1450880:intergenic 35.0%
! CTTTGTGGTTTTTGCTTATG+TGG - tig0033134:7002-7021 Msa1450880:intergenic 35.0%
GTGGAAATTCTTGTTCTTTG+TGG - tig0033134:7017-7036 Msa1450880:intergenic 35.0%
! TGGATCCATCTAAAGTATGA+GGG - tig0033134:7135-7154 Msa1450880:intergenic 35.0%
! ATGGATCCATCTAAAGTATG+AGG - tig0033134:7136-7155 Msa1450880:intergenic 35.0%
ATCACTAGAGAAATGTTGGA+AGG + tig0033134:7186-7205 Msa1450880:CDS 35.0%
! TTTAAGGTTGTGATTGTGGA+TGG + tig0033134:7228-7247 Msa1450880:CDS 35.0%
TGTGGATGGAAAAATGTATG+TGG + tig0033134:7242-7261 Msa1450880:CDS 35.0%
CAAGAGATGTGTTTACTTTG+TGG + tig0033134:7289-7308 Msa1450880:CDS 35.0%
AGAGATGTGTTTACTTTGTG+GGG + tig0033134:7291-7310 Msa1450880:CDS 35.0%
CAATTATTGAGAATGTACCC+TGG + tig0033134:7321-7340 Msa1450880:CDS 35.0%
AGATAGGCCTGTTATTCATA+AGG + tig0033134:7380-7399 Msa1450880:CDS 35.0%
CAATATCTAAACAAAGGTGG+TGG - tig0033134:7432-7451 Msa1450880:intergenic 35.0%
! AACAAAAACGGAGTTTTTCC+CGG - tig0033134:7673-7692 Msa1450880:intergenic 35.0%
!! TTTTATGTTGGAGGTGCAAA+AGG + tig0033134:7790-7809 Msa1450880:intron 35.0%
GTAGCTAGCCATTTATGTAA+TGG + tig0033134:8043-8062 Msa1450880:intron 35.0%
CAGAGACAAATATAAAGCCA+TGG + tig0033134:8295-8314 Msa1450880:CDS 35.0%
! ATAGAGTACCTTATGCGTAT+TGG + tig0033134:8370-8389 Msa1450880:CDS 35.0%
TTCCTTGCAATTCACATAGA+AGG + tig0033134:8517-8536 Msa1450880:intron 35.0%
TTCCTTCTATGTGAATTGCA+AGG - tig0033134:8522-8541 Msa1450880:intergenic 35.0%
ATATGTTTGTGTCATAGGAC+TGG + tig0033134:8558-8577 Msa1450880:intron 35.0%
TATGTTTGTGTCATAGGACT+GGG + tig0033134:8559-8578 Msa1450880:intron 35.0%
TGATTTCTTGTAACCTTGAG+TGG - tig0033134:8594-8613 Msa1450880:intergenic 35.0%
GGTTACAAGAAATCAAGCTT+AGG + tig0033134:8599-8618 Msa1450880:CDS 35.0%
!! TGTAAAGTGGACTTTTGAGT+TGG + tig0033134:8694-8713 Msa1450880:intron 35.0%
TTTATGTGCATTGTTGGAAC+AGG + tig0033134:8927-8946 Msa1450880:CDS 35.0%
! TTTATATAGAAGGATGGGCT+TGG + tig0033134:8957-8976 Msa1450880:intron 35.0%
GGGTCTAACATATAATGTCA+TGG - tig0033134:9017-9036 Msa1450880:intergenic 35.0%
TGGATCCATTACAACACTAT+TGG + tig0033134:9065-9084 Msa1450880:intron 35.0%
ATTGGCCAATAGTGTTGTAA+TGG - tig0033134:9073-9092 Msa1450880:intergenic 35.0%
TACAACACTATTGGCCAATT+AGG + tig0033134:9074-9093 Msa1450880:intron 35.0%
ACAACACTATTGGCCAATTA+GGG + tig0033134:9075-9094 Msa1450880:intron 35.0%
ATCCACAGCAAATTTAAGAG+AGG - tig0033134:9116-9135 Msa1450880:intergenic 35.0%
!! CTCTTAAATTTGCTGTGGAT+TGG + tig0033134:9116-9135 Msa1450880:intron 35.0%
!! CTTAAATTTGCTGTGGATTG+GGG + tig0033134:9118-9137 Msa1450880:intron 35.0%
ATTCCCTAAAATGGCATATC+AGG + tig0033134:9438-9457 Msa1450880:intron 35.0%
TGCTAGCAAATTCATACAAG+AGG + tig0033134:9480-9499 Msa1450880:intron 35.0%
ACAATGGCATGTGATGTAAT+TGG + tig0033134:9615-9634 Msa1450880:CDS 35.0%
GTGATGTAATTGGTACACAA+AGG + tig0033134:9625-9644 Msa1450880:CDS 35.0%
TGGTACACAAAGGAAATTCA+TGG + tig0033134:9635-9654 Msa1450880:CDS 35.0%
TACACAAAGGAAATTCATGG+AGG + tig0033134:9638-9657 Msa1450880:CDS 35.0%
GTGCATGGATTTAAATCACT+AGG - tig0033134:9681-9700 Msa1450880:intergenic 35.0%
CAACAAGACAGGTAGAAATT+TGG + tig0033134:9760-9779 Msa1450880:intron 35.0%
GCATAAAAAGGAGTGGATAT+GGG - tig0033134:10043-10062 Msa1450880:intergenic 35.0%
TGCATAAAAAGGAGTGGATA+TGG - tig0033134:10044-10063 Msa1450880:intergenic 35.0%
CTTCAAATCAAGTGTAGCAT+TGG + tig0033134:10337-10356 Msa1450880:intron 35.0%
! GAAAATCTTGAAGGCTAGTT+TGG + tig0033134:10394-10413 Msa1450880:intron 35.0%
TTATGATTGCCCAAGGATTA+AGG + tig0033134:10501-10520 Msa1450880:CDS 35.0%
GAAGCTTAACCTTAATCCTT+GGG - tig0033134:10513-10532 Msa1450880:intergenic 35.0%
AATGTGATGGTTGCTAAAAC+AGG + tig0033134:10882-10901 Msa1450880:intron 35.0%
ATGTGATGGTTGCTAAAACA+GGG + tig0033134:10883-10902 Msa1450880:intron 35.0%
CTCTCAACTAATGGAATGTT+AGG + tig0033134:10929-10948 Msa1450880:intron 35.0%
TCAAAGAACATGGCATACAA+TGG - tig0033134:11142-11161 Msa1450880:intergenic 35.0%
TTCCTACTAGTCAAAGAACA+TGG - tig0033134:11152-11171 Msa1450880:intergenic 35.0%
TTACCAAGTGATTAGAACTG+AGG - tig0033134:11325-11344 Msa1450880:intergenic 35.0%
TAAAGGTTGTATTGTCCTAC+CGG - tig0033134:11372-11391 Msa1450880:intergenic 35.0%
ATCATTACTCTTGGAGCTTT+AGG - tig0033134:11601-11620 Msa1450880:intergenic 35.0%
TCTGTCTCAATCATTACTCT+TGG - tig0033134:11610-11629 Msa1450880:intergenic 35.0%
TAGCAACGTCTTTCATATCT+TGG - tig0033134:11802-11821 Msa1450880:intergenic 35.0%
CATGACAAAAATACTAGGCT+AGG - tig0033134:11912-11931 Msa1450880:intergenic 35.0%
!! CTAGCCTAGTATTTTTGTCA+TGG + tig0033134:11910-11929 Msa1450880:intron 35.0%
! ATTTTTGTCATGGCTAACCA+TGG + tig0033134:11920-11939 Msa1450880:intron 35.0%
! TTTTTGTCATGGCTAACCAT+GGG + tig0033134:11921-11940 Msa1450880:intron 35.0%
!! CTTAGACTTGAAGAGTATCA+TGG - tig0033134:11977-11996 Msa1450880:intergenic 35.0%
CTAGAACCAAACATAACCTA+AGG - tig0033134:12086-12105 Msa1450880:intergenic 35.0%
!! CTTAGGTTATGTTTGGTTCT+AGG + tig0033134:12084-12103 Msa1450880:intron 35.0%
! TTCTAGGGAAAGATTGAAAG+TGG + tig0033134:12100-12119 Msa1450880:intron 35.0%
TCTAGGGAAAGATTGAAAGT+GGG + tig0033134:12101-12120 Msa1450880:intron 35.0%
GAAAGTGAATGGAAAGTGAA+AGG - tig0033134:12572-12591 Msa1450880:intergenic 35.0%
GTGTTTGGATCACAAAAGAA+AGG - tig0033134:12635-12654 Msa1450880:intergenic 35.0%
! AAACACACCCTTAAGGTTTT+GGG + tig0033134:12649-12668 Msa1450880:intron 35.0%
AATGAGGACAATAATGCTCT+AGG - tig0033134:12704-12723 Msa1450880:intergenic 35.0%
GATCATTTGTTTACGCAGTT+TGG - tig0033134:12768-12787 Msa1450880:intergenic 35.0%
TGAATTCTAGATCATATGCG+TGG + tig0033134:12895-12914 Msa1450880:intron 35.0%
! TAATCTTAAATTGGCGGATG+GGG - tig0033134:13081-13100 Msa1450880:intergenic 35.0%
TCAATACAAGGACAGATTTG+TGG - tig0033134:13169-13188 Msa1450880:intergenic 35.0%
ATTAACCAAGGGTTGAGAAA+TGG - tig0033134:13196-13215 Msa1450880:intergenic 35.0%
CTCTGTCATTGTATTAACCA+AGG - tig0033134:13208-13227 Msa1450880:intergenic 35.0%
!! TCAAGTTGAATCCTCCTATA+AGG - tig0033134:13529-13548 Msa1450880:intergenic 35.0%
! TATCTGAAACACTTCTATGG+CGG + tig0033134:13564-13583 Msa1450880:intron 35.0%
!! GCAAGTAACTTTAGCTTTCT+TGG - tig0033134:13619-13638 Msa1450880:intergenic 35.0%
AGCTAAAGTTACTTGCTTAG+TGG + tig0033134:13623-13642 Msa1450880:CDS 35.0%
GAAGAAAATCTTCTTGGTCT+TGG - tig0033134:14185-14204 Msa1450880:intergenic 35.0%
! CATGGTTGTTGAGATTTGTT+GGG - tig0033134:14272-14291 Msa1450880:intergenic 35.0%
ACATGGTTGTTGAGATTTGT+TGG - tig0033134:14273-14292 Msa1450880:intergenic 35.0%
TAAAGTATGAGGGACAAACA+TGG - tig0033134:14290-14309 Msa1450880:intergenic 35.0%
TTTGTCCCTCATACTTTAGA+TGG + tig0033134:14292-14311 Msa1450880:CDS 35.0%
! TGGATCCATCTAAAGTATGA+GGG - tig0033134:7135-7154 Msa1450880:intergenic 35.0%
! ATGGATCCATCTAAAGTATG+AGG - tig0033134:7136-7155 Msa1450880:intergenic 35.0%
! TCCATGAAGATCTAAAACCA+TGG + tig0033134:14316-14335 Msa1450880:CDS 35.0%
!!! TCCATGGTTTTAGATCTTCA+TGG - tig0033134:14320-14339 Msa1450880:intergenic 35.0%
CTAAAACCATGGAGAGAAAA+AGG + tig0033134:14327-14346 Msa1450880:CDS 35.0%
ACATGTTGCAAAAGGCAAAA+AGG + tig0033134:14361-14380 Msa1450880:CDS 35.0%
ACATTTCAAGCTTGTGATTG+TGG + tig0033134:14389-14408 Msa1450880:CDS 35.0%
CAAGAGATGTGTTTACTTTG+TGG + tig0033134:7289-7308 Msa1450880:CDS 35.0%
AGAGATGTGTTTACTTTGTG+GGG + tig0033134:7291-7310 Msa1450880:CDS 35.0%
CAATTATTGAGAATGTACCC+TGG + tig0033134:7321-7340 Msa1450880:CDS 35.0%
AACTTATCCAAAGGAACAAC+AGG - tig0033134:14555-14574 Msa1450880:intergenic 35.0%
GTTCCTTTGGATAAGTTTCA+AGG + tig0033134:14558-14577 Msa1450880:CDS 35.0%
CAATATCTAAACAAAGGAGG+CGG - tig0033134:14597-14616 Msa1450880:intergenic 35.0%
ATGCACCATTAAAGAGATAG+TGG + tig0033134:14794-14813 Msa1450880:intron 35.0%
TGCACCATTAAAGAGATAGT+GGG + tig0033134:14795-14814 Msa1450880:intron 35.0%
CGTAAGAAAAGTAGATCAGA+TGG + tig0033134:14899-14918 Msa1450880:intron 35.0%
AAGAAAAGTAGATCAGATGG+AGG + tig0033134:14902-14921 Msa1450880:intron 35.0%
TGATTTAGAGGTCAATGAGT+TGG + tig0033134:14986-15005 Msa1450880:intron 35.0%
CTTATCTCACTAAATAGGGT+TGG - tig0033134:15063-15082 Msa1450880:intergenic 35.0%
! TTCTTATATTTGAGACCGGA+GGG - tig0033134:15307-15326 Msa1450880:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - tig0033134:15306-15325 Msa1450880:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + tig0033134:15306-15325 Msa1450880:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG + tig0033134:15307-15326 Msa1450880:intron 35.0%
GTCATATATTAAGAGACGGA+GGG - tig0033134:15379-15398 Msa1450880:intergenic 35.0%
! GTTATTTAAAATGGGACGGA+GGG + tig0033134:15599-15618 Msa1450880:intron 35.0%
TTCTCCCTTAAAAAAGCTCT+AGG + tig0033134:15815-15834 Msa1450880:intron 35.0%
!!! TCCACCTAGAGCTTTTTTAA+GGG - tig0033134:15822-15841 Msa1450880:intergenic 35.0%
!!! ATCCACCTAGAGCTTTTTTA+AGG - tig0033134:15823-15842 Msa1450880:intergenic 35.0%
TTTAGGGACCAAAATGTTGA+TGG + tig0033134:15969-15988 Msa1450880:intron 35.0%
! TGTTGATGGAAATCTTTGAC+AGG + tig0033134:15983-16002 Msa1450880:intron 35.0%
! GTTGATGGAAATCTTTGACA+GGG + tig0033134:15984-16003 Msa1450880:intron 35.0%
ATAGGGACTAAAAATGCTGA+TGG + tig0033134:16033-16052 Msa1450880:intron 35.0%
CAGAGACAAATATAAAGCCA+TGG + tig0033134:8295-8314 Msa1450880:CDS 35.0%
AGTACCTTATGCTTATTGGA+AGG + tig0033134:16612-16631 Msa1450880:CDS 35.0%
GTACCTTATGCTTATTGGAA+GGG + tig0033134:16613-16632 Msa1450880:CDS 35.0%
TACCTTATGCTTATTGGAAG+GGG + tig0033134:16614-16633 Msa1450880:CDS 35.0%
!! TGTAGAAGGTTTTGTCTAGT+TGG - tig0033134:16655-16674 Msa1450880:intergenic 35.0%
GAACACTCTCATATACATAC+AGG + tig0033134:16702-16721 Msa1450880:CDS 35.0%
!!! GTATATTTTGATGACAGGAC+TGG + tig0033134:16829-16848 Msa1450880:intron 35.0%
TGGATACAAGAATCCAATCA+AGG + tig0033134:16849-16868 Msa1450880:CDS 35.0%
!! GGATTTGTTGAAACCTTGAT+TGG - tig0033134:16865-16884 Msa1450880:intergenic 35.0%
GGTTTCAACAAATCCAACTT+AGG + tig0033134:16870-16889 Msa1450880:CDS 35.0%
! TTTTAACATGCGCGTCAAAT+TGG - tig0033134:17137-17156 Msa1450880:intergenic 35.0%
!!! ATTTGGTTTTGACATGTCAC+AGG + tig0033134:17258-17277 Msa1450880:intron 35.0%
TGGTTCCCTTACAACATTAT+TGG + tig0033134:17396-17415 Msa1450880:CDS 35.0%
TTCCACAGCAAATTTAAGAG+AGG - tig0033134:17447-17466 Msa1450880:intergenic 35.0%
!! CTCTTAAATTTGCTGTGGAA+TGG + tig0033134:17447-17466 Msa1450880:CDS 35.0%
!! CTTAAATTTGCTGTGGAATG+GGG + tig0033134:17449-17468 Msa1450880:CDS 35.0%
TCTTGCTCATTTGAAGAATG+TGG - tig0033134:17514-17533 Msa1450880:intergenic 35.0%
TGGTAGCAAATTCATACAAG+AGG + tig0033134:17656-17675 Msa1450880:CDS 35.0%
TTCAAACCAACTATACCTAG+AGG + tig0033134:17747-17766 Msa1450880:CDS 35.0%
!! ATGTAATGGGTGGTAACAAA+AGG + tig0033134:17808-17827 Msa1450880:CDS 35.0%
! TATCTTAAACTCTTCTGGGG+TGG + tig0033134:5733-5752 Msa1450880:CDS 40.0%
GAGATGTTTCTTCACCAAGA+AGG + tig0033134:5771-5790 Msa1450880:CDS 40.0%
ACAAAACAAACCAACCACAG+TGG - tig0033134:5818-5837 Msa1450880:intergenic 40.0%
ACCATGGTAGAAAAATCACG+TGG + tig0033134:6114-6133 Msa1450880:intron 40.0%
! ACCACGTGATTTTTCTACCA+TGG - tig0033134:6118-6137 Msa1450880:intergenic 40.0%
GGATGTTGAAGCATAGGATT+AGG - tig0033134:6536-6555 Msa1450880:intergenic 40.0%
GGATGTTGAAGCATAGGATT+AGG - tig0033134:6536-6555 Msa1450880:intergenic 40.0%
TGCTTATGTGGATGGATGAA+AGG - tig0033134:6990-7009 Msa1450880:intergenic 40.0%
! GTGGTTTTTGCTTATGTGGA+TGG - tig0033134:6998-7017 Msa1450880:intergenic 40.0%
TTTCCACTTAGATGCACCAA+TGG + tig0033134:7030-7049 Msa1450880:CDS 40.0%
! TGTTTTGTAGGGTAGTCTCT+TGG - tig0033134:7081-7100 Msa1450880:intergenic 40.0%
CTTGTCCCTCATACTTTAGA+TGG + tig0033134:7127-7146 Msa1450880:CDS 40.0%
AGGGATCACTAGAGAAATGT+TGG + tig0033134:7182-7201 Msa1450880:CDS 40.0%
TTGTTCAGATCAATGGAGCT+TGG + tig0033134:7449-7468 Msa1450880:CDS 40.0%
TGGATATTGTGTTCCCAGAT+TGG + tig0033134:7469-7488 Msa1450880:CDS 40.0%
TAGTACTTACCATCCCCAAA+AGG - tig0033134:7496-7515 Msa1450880:intergenic 40.0%
GCTCTTGAGATGGGTAAATA+CGG - tig0033134:7737-7756 Msa1450880:intergenic 40.0%
AAATAGTGTGCAAGTGATGG+TGG + tig0033134:7954-7973 Msa1450880:intron 40.0%
! AAAGATAAGAGCGTGGAACT+TGG - tig0033134:8010-8029 Msa1450880:intergenic 40.0%
AGTACCTTATGCGTATTGGA+AGG + tig0033134:8374-8393 Msa1450880:CDS 40.0%
GTACCTTATGCGTATTGGAA+GGG + tig0033134:8375-8394 Msa1450880:CDS 40.0%
TACCTTATGCGTATTGGAAG+GGG + tig0033134:8376-8395 Msa1450880:CDS 40.0%
TCCTAGTTGCAGCAACATTA+GGG - tig0033134:8404-8423 Msa1450880:intergenic 40.0%
TTCCTAGTTGCAGCAACATT+AGG - tig0033134:8405-8424 Msa1450880:intergenic 40.0%
TGGGATAAAGAATCCACTCA+AGG + tig0033134:8578-8597 Msa1450880:CDS 40.0%
!!! TGACTTTTTCATCAGAGGCA+TGG + tig0033134:9045-9064 Msa1450880:intron 40.0%
!! CACCTCTCTTAAATTTGCTG+TGG + tig0033134:9111-9130 Msa1450880:intron 40.0%
GGGAAACAAACATGCTGATA+AGG + tig0033134:9138-9157 Msa1450880:intron 40.0%
CTAGCTATGAAGCACGAATA+CGG + tig0033134:9211-9230 Msa1450880:intron 40.0%
!! TATATGTGTTGGTGTCGTGT+CGG + tig0033134:9308-9327 Msa1450880:intron 40.0%
ATCTAGCAAGCTATGAAGCA+CGG - tig0033134:9367-9386 Msa1450880:intergenic 40.0%
!!! GTGCCTGATATGCCATTTTA+GGG - tig0033134:9444-9463 Msa1450880:intergenic 40.0%
!!! TGTGCCTGATATGCCATTTT+AGG - tig0033134:9445-9464 Msa1450880:intergenic 40.0%
CATATCAGGCACAAGCAATA+GGG + tig0033134:9452-9471 Msa1450880:intron 40.0%
ATATCAGGCACAAGCAATAG+GGG + tig0033134:9453-9472 Msa1450880:intron 40.0%
! GGAGTTTTGCTCAGAAACAA+TGG + tig0033134:9599-9618 Msa1450880:CDS 40.0%
GAAATTCATGGAGGAGTCAA+TGG + tig0033134:9647-9666 Msa1450880:CDS 40.0%
GTTAAAGGATCATATGGAGG+AGG - tig0033134:9708-9727 Msa1450880:intergenic 40.0%
TGCTTCTGCATAAAAAGGAG+TGG - tig0033134:10050-10069 Msa1450880:intergenic 40.0%
GGAAGCTTAACCTTAATCCT+TGG - tig0033134:10514-10533 Msa1450880:intergenic 40.0%
GGGTAATTAAGGTTTAGGCT+AGG + tig0033134:10903-10922 Msa1450880:intron 40.0%
GCTAGGAATCTCTCAACTAA+TGG + tig0033134:10920-10939 Msa1450880:intron 40.0%
ACTAATGGAATGTTAGGCGA+AGG + tig0033134:10935-10954 Msa1450880:intron 40.0%
!! CTAAGTATACGTTGGTCTTG+AGG + tig0033134:10992-11011 Msa1450880:intron 40.0%
TGCCATGTTCTTTGACTAGT+AGG + tig0033134:11147-11166 Msa1450880:intron 40.0%
AGTTAAGGAACATACAACGG+AGG + tig0033134:11286-11305 Msa1450880:intron 40.0%
CAAGTGATTAGAACTGAGGA+AGG - tig0033134:11321-11340 Msa1450880:intergenic 40.0%
! CTTCCTCAGTTCTAATCACT+TGG + tig0033134:11319-11338 Msa1450880:intron 40.0%
GGAATCATAGTTGACACATC+CGG + tig0033134:11350-11369 Msa1450880:intron 40.0%
TCAGGTCAAGACTATGTTTG+TGG + tig0033134:11412-11431 Msa1450880:intron 40.0%
AAGGCTCCTTAGGTAATTGT+TGG - tig0033134:11510-11529 Msa1450880:intergenic 40.0%
CTAAGAGGAGCCATTGATAT+TGG - tig0033134:11550-11569 Msa1450880:intergenic 40.0%
! GCTTTAGGTGGATCAACTAA+TGG - tig0033134:11586-11605 Msa1450880:intergenic 40.0%
!! ATTACTCTTGGAGCTTTAGG+TGG - tig0033134:11598-11617 Msa1450880:intergenic 40.0%
TAAGCCCAAGGTTCATAATG+AGG + tig0033134:11691-11710 Msa1450880:intron 40.0%
TGAGCCTCATTATGAACCTT+GGG - tig0033134:11698-11717 Msa1450880:intergenic 40.0%
TTGAGCCTCATTATGAACCT+TGG - tig0033134:11699-11718 Msa1450880:intergenic 40.0%
TCAACAAGTCGAAAAGTTGG+CGG + tig0033134:11715-11734 Msa1450880:intron 40.0%
GTCACCATAATATGCTTGTC+TGG - tig0033134:11741-11760 Msa1450880:intergenic 40.0%
! TGGTTACTTTGAACTCCTTG+TGG - tig0033134:11782-11801 Msa1450880:intergenic 40.0%
AAGTCAGTCGATCATTGCAT+CGG + tig0033134:11826-11845 Msa1450880:intron 40.0%
! TTTTGTCATGGCTAACCATG+GGG + tig0033134:11922-11941 Msa1450880:intron 40.0%
ACTCATATACCTAGTGCCTT+AGG + tig0033134:12067-12086 Msa1450880:intron 40.0%
! CAAACATAACCTAAGGCACT+AGG - tig0033134:12079-12098 Msa1450880:intergenic 40.0%
CTAGTGCCTTAGGTTATGTT+TGG + tig0033134:12077-12096 Msa1450880:intron 40.0%
AAAGTGGGAAAGAAAGTGAG+TGG + tig0033134:12116-12135 Msa1450880:intron 40.0%
! CAAAACCTTAAGGGTGTGTT+TGG - tig0033134:12650-12669 Msa1450880:intergenic 40.0%
! CAAACACACCCTTAAGGTTT+TGG + tig0033134:12648-12667 Msa1450880:intron 40.0%
! AACACACCCTTAAGGTTTTG+GGG + tig0033134:12650-12669 Msa1450880:intron 40.0%
AATCTCCCCCAAAACCTTAA+GGG - tig0033134:12659-12678 Msa1450880:intergenic 40.0%
!!! TTAAGGTTTTGGGGGAGATT+CGG + tig0033134:12659-12678 Msa1450880:intron 40.0%
TATGTATTGGGGAGCAGTAA+GGG - tig0033134:12740-12759 Msa1450880:intergenic 40.0%
TTATGTATTGGGGAGCAGTA+AGG - tig0033134:12741-12760 Msa1450880:intergenic 40.0%
ATACAACCGAGATCTATCAC+TGG + tig0033134:13100-13119 Msa1450880:intron 40.0%
TACAACCGAGATCTATCACT+GGG + tig0033134:13101-13120 Msa1450880:intron 40.0%
AATGTCCATTTCTCAACCCT+TGG + tig0033134:13188-13207 Msa1450880:intron 40.0%
TTGTTGATGTGATCTACAGC+TGG - tig0033134:13341-13360 Msa1450880:intergenic 40.0%
AACTCAAAAACTTGGAGCAG+AGG - tig0033134:13486-13505 Msa1450880:intergenic 40.0%
GTCTGCAACAAGTTCCTTAT+AGG + tig0033134:13512-13531 Msa1450880:intron 40.0%
TGCAACAAGTTCCTTATAGG+AGG + tig0033134:13515-13534 Msa1450880:intron 40.0%
!! CTTTTTGTGCTTTTGCTGTC+TGG + tig0033134:13649-13668 Msa1450880:CDS 40.0%
! GGAAGGAGCTAGTCTAATAT+TGG + tig0033134:14029-14048 Msa1450880:intron 40.0%
AGTCTGTCTTTGTGGATGAA+TGG - tig0033134:14162-14181 Msa1450880:intergenic 40.0%
! TGTTTTGTAGGGTAGTCTCT+TGG - tig0033134:7081-7100 Msa1450880:intergenic 40.0%
CACAAGGAACATGTTGCAAA+AGG + tig0033134:14353-14372 Msa1450880:CDS 40.0%
TTCAAGCTTGTGATTGTGGA+TGG + tig0033134:14393-14412 Msa1450880:CDS 40.0%
TGTGGATGGAAAGATGTATG+TGG + tig0033134:14407-14426 Msa1450880:CDS 40.0%
AGATAAGCCTGTTGTTCCTT+TGG + tig0033134:14545-14564 Msa1450880:CDS 40.0%
GGTCCTTGAAACTTATCCAA+AGG - tig0033134:14564-14583 Msa1450880:intergenic 40.0%
!! TCTTTCCAGATTGGTCCTTT+TGG + tig0033134:14643-14662 Msa1450880:CDS 40.0%
!! CTTTCCAGATTGGTCCTTTT+GGG + tig0033134:14644-14663 Msa1450880:CDS 40.0%
!! TTTCCAGATTGGTCCTTTTG+GGG + tig0033134:14645-14664 Msa1450880:CDS 40.0%
TAAATGTTGCGTTGGATGAG+TGG + tig0033134:14745-14764 Msa1450880:intron 40.0%
GCACCATTAAAGAGATAGTG+GGG + tig0033134:14796-14815 Msa1450880:intron 40.0%
! CACCATTAAAGAGATAGTGG+GGG + tig0033134:14797-14816 Msa1450880:intron 40.0%
TACCCCCACTATCTCTTTAA+TGG - tig0033134:14802-14821 Msa1450880:intergenic 40.0%
GGTCATATATTAAGAGACGG+AGG - tig0033134:15380-15399 Msa1450880:intergenic 40.0%
! GGTTATTTAAAATGGGACGG+AGG + tig0033134:15598-15617 Msa1450880:intron 40.0%
!! TATAAGGAGAAAGGTACTGG+TGG + tig0033134:15666-15685 Msa1450880:intron 40.0%
!!! GTACTGGTGGTCTTTTTTAG+AGG + tig0033134:15679-15698 Msa1450880:intron 40.0%
ATCAAGACCTGCATTTGTCA+AGG - tig0033134:15720-15739 Msa1450880:intergenic 40.0%
!! TCCCTTAAAAAAGCTCTAGG+TGG + tig0033134:15818-15837 Msa1450880:intron 40.0%
AAGGGAACAAAAAGACCAAG+TGG + tig0033134:16581-16600 Msa1450880:CDS 40.0%
GAACAAAAAGACCAAGTGGA+AGG + tig0033134:16585-16604 Msa1450880:CDS 40.0%
TTCCCCTTCCAATAAGCATA+AGG - tig0033134:16619-16638 Msa1450880:intergenic 40.0%
GTCTAGTTGGAGCAACATAA+GGG - tig0033134:16642-16661 Msa1450880:intergenic 40.0%
TGTCTAGTTGGAGCAACATA+AGG - tig0033134:16643-16662 Msa1450880:intergenic 40.0%
TCACCTACCTATGAGTACAT+TGG - tig0033134:16899-16918 Msa1450880:intergenic 40.0%
GGGGCATAGAATGATACATT+TGG + tig0033134:17241-17260 Msa1450880:intron 40.0%
! TATACATAGAAGGATGGGCT+TGG + tig0033134:17288-17307 Msa1450880:CDS 40.0%
!! CACCTCTCTTAAATTTGCTG+TGG + tig0033134:9111-9130 Msa1450880:intron 40.0%
ATCTAACAGGCACAGTCAAT+AGG + tig0033134:17627-17646 Msa1450880:intron 40.0%
! ATGACATGTGATGTAATGGG+TGG + tig0033134:17798-17817 Msa1450880:CDS 40.0%
! TAATGGGTGGTAACAAAAGG+AGG + tig0033134:17811-17830 Msa1450880:CDS 40.0%
TGGTAACAAAAGGAGGTTCA+TGG + tig0033134:17818-17837 Msa1450880:CDS 40.0%
TCTAAAGGATCATATGGAGG+AGG - tig0033134:17891-17910 Msa1450880:intergenic 40.0%
GAAGGGAGAGAGAATGAACA+TGG - tig0033134:5599-5618 None:intergenic 45.0%
TACAATAGCTACCACCACTG+TGG + tig0033134:5801-5820 Msa1450880:CDS 45.0%
AAACAAACCAACCACAGTGG+TGG - tig0033134:5815-5834 Msa1450880:intergenic 45.0%
CGGTCACATGACAACAAGAT+GGG - tig0033134:6407-6426 Msa1450880:intergenic 45.0%
TCGGTCACATGACAACAAGA+TGG - tig0033134:6408-6427 Msa1450880:intergenic 45.0%
! CTTGTTGTCATGTGACCGAA+AGG + tig0033134:6409-6428 Msa1450880:intron 45.0%
AGGACTTGAACGTGACCTTT+CGG - tig0033134:6427-6446 Msa1450880:intergenic 45.0%
GTGTTGGGATGTTGAAGCAT+AGG - tig0033134:6542-6561 Msa1450880:intergenic 45.0%
GTGTTGGGATGTTGAAGCAT+AGG - tig0033134:6542-6561 Msa1450880:intergenic 45.0%
TCTCCATTGGTGCATCTAAG+TGG - tig0033134:7036-7055 Msa1450880:intergenic 45.0%
! GTGATCCCTTTTTCTCTCCA+TGG - tig0033134:7171-7190 Msa1450880:intergenic 45.0%
! AAAGGTGGTGGTGAAGCATT+TGG - tig0033134:7420-7439 Msa1450880:intergenic 45.0%
!! TGTTCCCAGATTGGTCCTTT+TGG + tig0033134:7478-7497 Msa1450880:CDS 45.0%
!! GTTCCCAGATTGGTCCTTTT+GGG + tig0033134:7479-7498 Msa1450880:CDS 45.0%
!! TTCCCAGATTGGTCCTTTTG+GGG + tig0033134:7480-7499 Msa1450880:CDS 45.0%
ATCCCCAAAAGGACCAATCT+GGG - tig0033134:7485-7504 Msa1450880:intergenic 45.0%
! AAACGGAGTTTTTCCCGGTA+CGG - tig0033134:7668-7687 Msa1450880:intergenic 45.0%
! TACCCATCTCAAGAGCATGT+TGG + tig0033134:7741-7760 Msa1450880:intron 45.0%
CTCCAACATGCTCTTGAGAT+GGG - tig0033134:7746-7765 Msa1450880:intergenic 45.0%
! TGCTTATAAGTTGGGAGGGA+TGG + tig0033134:7830-7849 Msa1450880:intron 45.0%
TATCCTTCCACTTGGTCTGT+TGG - tig0033134:8353-8372 Msa1450880:intergenic 45.0%
AGGTACTCTATCCTTCCACT+TGG - tig0033134:8361-8380 Msa1450880:intergenic 45.0%
TTCCCCTTCCAATACGCATA+AGG - tig0033134:8381-8400 Msa1450880:intergenic 45.0%
ACCCTAATGTTGCTGCAACT+AGG + tig0033134:8400-8419 Msa1450880:CDS 45.0%
TAGGGAATCAATGCACCCAT+AGG + tig0033134:8618-8637 Msa1450880:CDS 45.0%
CATAAACACCAGACACGACA+CGG + tig0033134:9235-9254 Msa1450880:intron 45.0%
! GGACACTCTTTGGATTAGAC+AGG - tig0033134:9346-9365 Msa1450880:intergenic 45.0%
TATGAAGCACGGACACTCTT+TGG - tig0033134:9356-9375 Msa1450880:intergenic 45.0%
GCATATCAGGCACAAGCAAT+AGG + tig0033134:9451-9470 Msa1450880:intron 45.0%
ACAGCTCCTTGAGGTATAGT+TGG - tig0033134:9579-9598 Msa1450880:intergenic 45.0%
AACTATACCTCAAGGAGCTG+TGG + tig0033134:9578-9597 Msa1450880:CDS 45.0%
TATGGAGGAGGAATAGTGCA+TGG - tig0033134:9696-9715 Msa1450880:intergenic 45.0%
! GCTAGTTTGGACAACGTAGA+GGG + tig0033134:10407-10426 Msa1450880:CDS 45.0%
TCGTTGCTTATGATTGCCCA+AGG + tig0033134:10494-10513 Msa1450880:CDS 45.0%
GTGCATGAGAGGGAGAAAAT+TGG + tig0033134:10692-10711 Msa1450880:intron 45.0%
GAGAAAATTGGCGAGAGAGA+GGG + tig0033134:10704-10723 Msa1450880:intron 45.0%
AACGCAAAGAGCGATGAGAA+AGG + tig0033134:11083-11102 Msa1450880:intron 45.0%
! GAGAAAGGAAGCATGCTCAT+AGG + tig0033134:11098-11117 Msa1450880:intron 45.0%
CATAGGAGAGTTGCACACTA+AGG + tig0033134:11115-11134 Msa1450880:intron 45.0%
TCATAGTTGACACATCCGGT+AGG + tig0033134:11354-11373 Msa1450880:intron 45.0%
GTCGGACCAACAATTACCTA+AGG + tig0033134:11501-11520 Msa1450880:intron 45.0%
TGCTGACATTGTTAAGCCCA+AGG + tig0033134:11679-11698 Msa1450880:intron 45.0%
GGCTCAACAAGTCGAAAAGT+TGG + tig0033134:11712-11731 Msa1450880:intron 45.0%
TTCATGACCAACACACCACA+AGG + tig0033134:11764-11783 Msa1450880:intron 45.0%
TTGAACTCCTTGTGGTGTGT+TGG - tig0033134:11774-11793 Msa1450880:intergenic 45.0%
TTTGTCATGGCTAACCATGG+GGG + tig0033134:11923-11942 Msa1450880:intron 45.0%
TATGTCTCATTCACGCCACT+AGG - tig0033134:11951-11970 Msa1450880:intergenic 45.0%
! GGTTTGGAACTACTGCAAAG+AGG + tig0033134:12156-12175 Msa1450880:intron 45.0%
! TGCGGAAAGGTTTTGCTTGT+AGG - tig0033134:12207-12226 Msa1450880:intergenic 45.0%
AAAACCTTTCCGCACTGGAT+TGG + tig0033134:12213-12232 Msa1450880:intron 45.0%
! CTTTTCCATCCAATCCAGTG+CGG - tig0033134:12225-12244 Msa1450880:intergenic 45.0%
GGATCACAAAAGAAAGGGAG+AGG - tig0033134:12629-12648 Msa1450880:intergenic 45.0%
GTGATCCAAACACACCCTTA+AGG + tig0033134:12642-12661 Msa1450880:intron 45.0%
!! ACACACCCTTAAGGTTTTGG+GGG + tig0033134:12651-12670 Msa1450880:intron 45.0%
GAATCTCCCCCAAAACCTTA+AGG - tig0033134:12660-12679 Msa1450880:intergenic 45.0%
TAGATCATATGCGTGGTCAC+AGG + tig0033134:12902-12921 Msa1450880:intron 45.0%
! ATCTTGCTCGAGAAGCATGA+GGG + tig0033134:13228-13247 Msa1450880:intron 45.0%
AACTTGGAGCAGAGGAACTA+TGG - tig0033134:13478-13497 Msa1450880:intergenic 45.0%
! GTGATCCCTTTTTCTCTCCA+TGG - tig0033134:7171-7190 Msa1450880:intergenic 45.0%
GGAGAGAAAAAGGGATCACA+AGG + tig0033134:14337-14356 Msa1450880:CDS 45.0%
! CCAAATCAGGTAACTTGCCA+GGG - tig0033134:14506-14525 Msa1450880:intergenic 45.0%
! TCCAAATCAGGTAACTTGCC+AGG - tig0033134:14507-14526 Msa1450880:intergenic 45.0%
TAGGACTTACCATCCCCAAA+AGG - tig0033134:14661-14680 Msa1450880:intergenic 45.0%
TGCTTCTATCATACTCCCTC+CGG + tig0033134:15172-15191 Msa1450880:intron 45.0%
CATATGTGCGAGAGTCAACT+AGG - tig0033134:15401-15420 Msa1450880:intergenic 45.0%
ATTTGTCAAGGTGGGATGTG+TGG - tig0033134:15708-15727 Msa1450880:intergenic 45.0%
AGACCTGCATTTGTCAAGGT+GGG - tig0033134:15716-15735 Msa1450880:intergenic 45.0%
AAGACCTGCATTTGTCAAGG+TGG - tig0033134:15717-15736 Msa1450880:intergenic 45.0%
TGCAGGTCTTGATCAAATGC+AGG + tig0033134:15727-15746 Msa1450880:intron 45.0%
ACAGGGACCAAAAATGCTGA+TGG + tig0033134:16001-16020 Msa1450880:intron 45.0%
AACTAGAACATCACGACCCA+AGG - tig0033134:16175-16194 Msa1450880:intergenic 45.0%
AGGTACTCTATCCTTCCACT+TGG - tig0033134:8361-8380 Msa1450880:intergenic 45.0%
AGTACATTGGTCCCCTAAGT+TGG - tig0033134:16886-16905 Msa1450880:intergenic 45.0%
TAGGGGACCAATGTACTCAT+AGG + tig0033134:16889-16908 Msa1450880:CDS 45.0%
GGACCAATGTACTCATAGGT+AGG + tig0033134:16893-16912 Msa1450880:intron 45.0%
TAACATGCGCGTCAAATTGG+AGG - tig0033134:17134-17153 Msa1450880:intergenic 45.0%
GGGCAACAATCACACTCATA+AGG + tig0033134:17469-17488 Msa1450880:CDS 45.0%
ACAGCTCCTCTAGGTATAGT+TGG - tig0033134:17756-17775 Msa1450880:intergenic 45.0%
AACTATACCTAGAGGAGCTG+TGG + tig0033134:17755-17774 Msa1450880:CDS 45.0%
CAAATTTCCACAGCTCCTCT+AGG - tig0033134:17765-17784 Msa1450880:intergenic 45.0%
GAGGTTCATGGAAGAGTCAA+TGG + tig0033134:17830-17849 Msa1450880:CDS 45.0%
CATGGAAGAGTCAATGGTGA+AGG + tig0033134:17836-17855 Msa1450880:CDS 45.0%
TATGGAGGAGGAATAGTGCA+TGG - tig0033134:9696-9715 Msa1450880:intergenic 45.0%
!!! TTTAATTATGTTTTTTTTAA+TGG + tig0033134:13813-13832 Msa1450880:intron 5.0%
!!! ATATTAATTTTTCTTATAAT+TGG + tig0033134:15104-15123 Msa1450880:intron 5.0%
!!! ATTTTTTATTTAAAATTTTG+AGG - tig0033134:16209-16228 Msa1450880:intergenic 5.0%
!! CATAAATAAAAATAAAAATT+AGG - tig0033134:16382-16401 Msa1450880:intergenic 5.0%
ATAGCTACCACCACTGTGGT+TGG + tig0033134:5805-5824 Msa1450880:CDS 50.0%
CGAATCGACCAAGAACACCT+TGG + tig0033134:6165-6184 Msa1450880:intron 50.0%
CCAAATCAGGCAACTTGCCA+GGG - tig0033134:7341-7360 Msa1450880:intergenic 50.0%
TCCAAATCAGGCAACTTGCC+AGG - tig0033134:7342-7361 Msa1450880:intergenic 50.0%
CATCCCCAAAAGGACCAATC+TGG - tig0033134:7486-7505 Msa1450880:intergenic 50.0%
!! CAGATTGGTCCTTTTGGGGA+TGG + tig0033134:7484-7503 Msa1450880:CDS 50.0%
CCTCCAACATGCTCTTGAGA+TGG - tig0033134:7747-7766 Msa1450880:intergenic 50.0%
! CCATCTCAAGAGCATGTTGG+AGG + tig0033134:7744-7763 Msa1450880:intron 50.0%
AAGGGAACCAACAGACCAAG+TGG + tig0033134:8343-8362 Msa1450880:CDS 50.0%
GAACCAACAGACCAAGTGGA+AGG + tig0033134:8347-8366 Msa1450880:CDS 50.0%
CAAAACTCCACAGCTCCTTG+AGG - tig0033134:9588-9607 Msa1450880:intergenic 50.0%
CATGGAGGAGTCAATGGTGA+AGG + tig0033134:9653-9672 Msa1450880:CDS 50.0%
!! GGCTAGTTTGGACAACGTAG+AGG + tig0033134:10406-10425 Msa1450880:intron 50.0%
GGACAACGTAGAGGGAATAC+TGG + tig0033134:10415-10434 Msa1450880:CDS 50.0%
CGAAAGAAATCCATCCCCGT+CGG - tig0033134:10477-10496 Msa1450880:intergenic 50.0%
TGGAAGAAGTGGTGCATGAG+AGG + tig0033134:10681-10700 Msa1450880:intron 50.0%
GGAAGAAGTGGTGCATGAGA+GGG + tig0033134:10682-10701 Msa1450880:intron 50.0%
GGAGAAAATTGGCGAGAGAG+AGG + tig0033134:10703-10722 Msa1450880:intron 50.0%
GGAATGTTAGGCGAAGGCTA+AGG + tig0033134:10941-10960 Msa1450880:intron 50.0%
! GGCTCCTCTTAGTGTTTCTG+AGG + tig0033134:11558-11577 Msa1450880:intron 50.0%
GGTGCCTCAGAAACACTAAG+AGG - tig0033134:11565-11584 Msa1450880:intergenic 50.0%
GCGGCCAGACAAGCATATTA+TGG + tig0033134:11734-11753 Msa1450880:intron 50.0%
GGAACTACTGCAAAGAGGAG+AGG + tig0033134:12161-12180 Msa1450880:intron 50.0%
CAAGCAAAACCTTTCCGCAC+TGG + tig0033134:12208-12227 Msa1450880:intron 50.0%
GGGAGAGGAGAGTAAGTGAA+AGG - tig0033134:12614-12633 Msa1450880:intergenic 50.0%
! TCTAGGACTACAAGAGAGCG+AGG - tig0033134:12687-12706 Msa1450880:intergenic 50.0%
CAGCACCCAGTGATAGATCT+CGG - tig0033134:13109-13128 Msa1450880:intergenic 50.0%
! GATCTTGCTCGAGAAGCATG+AGG + tig0033134:13227-13246 Msa1450880:intron 50.0%
! TCTTGCTCGAGAAGCATGAG+GGG + tig0033134:13229-13248 Msa1450880:intron 50.0%
GGTCTTGGAGTCTGTCTTTG+TGG - tig0033134:14170-14189 Msa1450880:intergenic 50.0%
CCCTGGCAAGTTACCTGATT+TGG + tig0033134:14503-14522 Msa1450880:CDS 50.0%
! AAAGGAGGCGGTGAAGCATT+TGG - tig0033134:14585-14604 Msa1450880:intergenic 50.0%
CATCCCCAAAAGGACCAATC+TGG - tig0033134:7486-7505 Msa1450880:intergenic 50.0%
!! CAGATTGGTCCTTTTGGGGA+TGG + tig0033134:7484-7503 Msa1450880:CDS 50.0%
AGATCAGATGGAGGAGAGTC+AGG + tig0033134:14911-14930 Msa1450880:intron 50.0%
CATCCCACCTTGACAAATGC+AGG + tig0033134:15710-15729 Msa1450880:intron 50.0%
ACAGGCACAGTCAATAGGAG+AGG + tig0033134:17632-17651 Msa1450880:intron 50.0%
CCCTGGCAAGTTGCCTGATT+TGG + tig0033134:7338-7357 Msa1450880:CDS 55.0%
TCAGGCACAAGCAATAGGGG+AGG + tig0033134:9456-9475 Msa1450880:intron 55.0%
! CAGTCGATCATTGCATCGGC+AGG + tig0033134:11830-11849 Msa1450880:intron 55.0%
!! CTAACCATGGGGGTACCTAG+TGG + tig0033134:11933-11952 Msa1450880:intron 55.0%
CCATCCAATCCAGTGCGGAA+AGG - tig0033134:12220-12239 Msa1450880:intergenic 55.0%
! CCTTTCCGCACTGGATTGGA+TGG + tig0033134:12217-12236 Msa1450880:intron 55.0%
GGGTCACGGGAGAAACAATG+AGG - tig0033134:12720-12739 Msa1450880:intergenic 55.0%
TTGGGGAGCAGTAAGGGTCA+CGG - tig0033134:12734-12753 Msa1450880:intergenic 55.0%
GCACAGTCAATAGGAGAGGC+TGG + tig0033134:17636-17655 Msa1450880:CDS 55.0%
AGTTGCCGGTGGAGGCTTCA+CGG - tig0033134:10454-10473 Msa1450880:intergenic 60.0%
TGGGGAGCAGTAAGGGTCAC+GGG - tig0033134:12733-12752 Msa1450880:intergenic 60.0%
AGGCTTCACGGTCGTCGTCG+CGG - tig0033134:10442-10461 Msa1450880:intergenic 65.0%
GACGACCGTGAAGCCTCCAC+CGG + tig0033134:10446-10465 Msa1450880:CDS 65.0%
TCCATCCCCGTCGGAGTTGC+CGG - tig0033134:10468-10487 Msa1450880:intergenic 65.0%
CACGCCACTAGGTACCCCCA+TGG - tig0033134:11940-11959 Msa1450880:intergenic 65.0%
CGGCGTGTCCGTGTCGTGTC+TGG - tig0033134:9246-9265 Msa1450880:intergenic 70.0%
GCCTCCACCGGCAACTCCGA+CGG + tig0033134:10458-10477 Msa1450880:CDS 70.0%
CCTCCACCGGCAACTCCGAC+GGG + tig0033134:10459-10478 Msa1450880:CDS 70.0%
CTCCACCGGCAACTCCGACG+GGG + tig0033134:10460-10479 Msa1450880:CDS 70.0%
ATCCCCGTCGGAGTTGCCGG+TGG - tig0033134:10465-10484 Msa1450880:intergenic 70.0%
ACCGGCAACTCCGACGGGGA+TGG + tig0033134:10464-10483 Msa1450880:CDS 70.0%
CCCGTCGGAGTTGCCGGTGG+AGG - tig0033134:10462-10481 Msa1450880:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0033134 gene 5540 18218 5540 ID=Msa1450880;Name=Msa1450880
tig0033134 mRNA 5540 18218 5540 ID=Msa1450880-mRNA-1;Parent=Msa1450880;Name=Msa1450880-mRNA-1;_AED=0.15;_eAED=0.16;_QI=172|0.61|0.64|0.92|0.84|0.71|14|187|931
tig0033134 exon 5540 5876 5540 ID=Msa1450880-mRNA-1:exon:17723;Parent=Msa1450880-mRNA-1
tig0033134 exon 6952 7505 6952 ID=Msa1450880-mRNA-1:exon:17724;Parent=Msa1450880-mRNA-1
tig0033134 exon 8293 8485 8293 ID=Msa1450880-mRNA-1:exon:17725;Parent=Msa1450880-mRNA-1
tig0033134 exon 8575 8639 8575 ID=Msa1450880-mRNA-1:exon:17726;Parent=Msa1450880-mRNA-1
tig0033134 exon 8918 8948 8918 ID=Msa1450880-mRNA-1:exon:17727;Parent=Msa1450880-mRNA-1
tig0033134 exon 9561 9770 9561 ID=Msa1450880-mRNA-1:exon:17728;Parent=Msa1450880-mRNA-1
tig0033134 exon 10407 10544 10407 ID=Msa1450880-mRNA-1:exon:17729;Parent=Msa1450880-mRNA-1
tig0033134 exon 13600 13678 13600 ID=Msa1450880-mRNA-1:exon:17730;Parent=Msa1450880-mRNA-1
tig0033134 exon 14148 14670 14148 ID=Msa1450880-mRNA-1:exon:17731;Parent=Msa1450880-mRNA-1
tig0033134 exon 16531 16723 16531 ID=Msa1450880-mRNA-1:exon:17732;Parent=Msa1450880-mRNA-1
tig0033134 exon 16846 16910 16846 ID=Msa1450880-mRNA-1:exon:17733;Parent=Msa1450880-mRNA-1
tig0033134 exon 17280 17490 17280 ID=Msa1450880-mRNA-1:exon:17734;Parent=Msa1450880-mRNA-1
tig0033134 exon 17636 18087 17636 ID=Msa1450880-mRNA-1:exon:17735;Parent=Msa1450880-mRNA-1
tig0033134 exon 18115 18218 18115 ID=Msa1450880-mRNA-1:exon:17736;Parent=Msa1450880-mRNA-1
tig0033134 five_prime_UTR 5540 5711 5540 ID=Msa1450880-mRNA-1:five_prime_utr;Parent=Msa1450880-mRNA-1
tig0033134 CDS 5712 5876 5712 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 6952 7505 6952 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 8293 8485 8293 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 8575 8639 8575 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 8918 8948 8918 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 9561 9770 9561 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 10407 10544 10407 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 13600 13678 13600 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 14148 14670 14148 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 16531 16723 16531 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 16846 16910 16846 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 17280 17490 17280 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 CDS 17636 18004 17636 ID=Msa1450880-mRNA-1:cds;Parent=Msa1450880-mRNA-1
tig0033134 three_prime_UTR 18005 18087 18005 ID=Msa1450880-mRNA-1:three_prime_utr;Parent=Msa1450880-mRNA-1
tig0033134 three_prime_UTR 18115 18218 18115 ID=Msa1450880-mRNA-1:three_prime_utr;Parent=Msa1450880-mRNA-1
Gene Sequence

>Msa1450880

ATGAACAAGGACAATGAAACATATCTTAAACTCTTCTGGGGTGGTTCTAATCGTCATAAGAGATGTTTCTTCACCAAGAAGGCTAAAGTTACAATAGCTACCACCACTGTGGTTGGTTTGTTTTGTTTAGTAGCCACTTTTTGTGATTTTGCAGCATGGAATACTTACATAATTGCAGGGAATTCCATCCCAAATCAAAACCTTTCATCCATCCACATAAGCAAAAACCACAAAGAACAAGAATTTCCACTTAGATGCACCAATGGAGAAAAAACTGAGAAACAAACATGTCCAAGAGACTACCCTACAAAACATAACCCAACAAATCTTAATAGTCAAACTTGTCCCTCATACTTTAGATGGATCCATGAAGATTTAAAACCATGGAGAGAAAAAGGGATCACTAGAGAAATGTTGGAAGGAGCAAAAAGAACAGCAAATTTTAAGGTTGTGATTGTGGATGGAAAAATGTATGTGGAAAAGTATAGGAAGTCAATTCAAACAAGAGATGTGTTTACTTTGTGGGGCATTTTGCAATTATTGAGAATGTACCCTGGCAAGTTGCCTGATTTGGAACTTATGTTTGATTGTGAAGATAGGCCTGTTATTCATAAGGCTAATTTTCAAGGTCCAAATGCTTCACCACCACCTTTGTTTAGATATTGTTCAGATCAATGGAGCTTGGATATTGTGTTCCCAGATTGGTCCTTTTGGGGATGGGCAGAGACAAATATAAAGCCATGGAAAAATACCCTTAAAGAGATAAAAGAAGGGAACCAACAGACCAAGTGGAAGGATAGAGTACCTTATGCGTATTGGAAGGGGAACCCTAATGTTGCTGCAACTAGGAAAAACCTTTTGAAATGCAATGCTACATCAAAAGATGATTGGAACACTCGCCTATACATACAAGACTGGGATAAAGAATCCACTCAAGGTTACAAGAAATCAAGCTTAGGGAATCAATGCACCCATAGAGCCTTAATTTTATGTGCATTGTTGGAACAGCTTTTGAAATTTAAACCAACTATACCTCAAGGAGCTGTGGAGTTTTGCTCAGAAACAATGGCATGTGATGTAATTGGTACACAAAGGAAATTCATGGAGGAGTCAATGGTGAAGGTTCCTAGTGATTTAAATCCATGCACTATTCCTCCTCCATATGATCCTTTAACTTTACATGAACTTTTAGAGAGAAAAGCTAATTCAACAAGACAGGCTAGTTTGGACAACGTAGAGGGAATACTGGACCGCGACGACGACCGTGAAGCCTCCACCGGCAACTCCGACGGGGATGGATTTCTTTCGTTGCTTATGATTGCCCAAGGATTAAGGTTAAGCTTCCTCCAAGAAGAGAAGCTGTGTATGTTCTCCAAGAAAGCTAAAGTTACTTGCTTAGTGGCTACTTTTTGTGCTTTTGCTGTCTGGACTGTAAGTGTTTCAATTCCATTCATCCACAAAGACAGACTCCAAGACCAAGAAGATTTTCTTCTTAAATGCATACAAGGAAAATCTTTCAAACAAAAATGTCCAAGAGACTACCCTACAAAACATAACCCAACAAATCTCAACAACCATGTTTGTCCCTCATACTTTAGATGGATCCATGAAGATCTAAAACCATGGAGAGAAAAAGGGATCACAAGGAACATGTTGCAAAAGGCAAAAAGGACAGCACATTTCAAGCTTGTGATTGTGGATGGAAAGATGTATGTGGAAAAGTATAGGAAGTCAATTCAAACAAGAGATGTGTTTACTTTGTGGGGTATTTTGCAATTATTGAGAATGTACCCTGGCAAGTTACCTGATTTGGAACTTATGTTTGATTGTGAAGATAAGCCTGTTGTTCCTTTGGATAAGTTTCAAGGACCAAATGCTTCACCGCCTCCTTTGTTTAGATATTGTTCAGATCAATTGAGCTTAGATATTGTCTTTCCAGATTGGTCCTTTTGGGGATGGGCAGAGACAAATATAAAGCCATGGAAAAATATCCTTAAAGTCATAAATGAAGGGAACAAAAAGACCAAGTGGAAGGATAGAGTACCTTATGCTTATTGGAAGGGGAACCCTTATGTTGCTCCAACTAGACAAAACCTTCTACAATGCAATGTTACATTAGAAAATGATTGGAACACTCTCATATACATACAGGACTGGATACAAGAATCCAATCAAGGTTTCAACAAATCCAACTTAGGGGACCAATGTACTCATAGGTACAAGATATACATAGAAGGATGGGCTTGGTCAGTTAGTGAAAAATACATTATGGCTTGTGATTCCATGACATTATATGTAAAGTCCAATTACCATGATTTTTTCATAAGAGGCATGGTTCCCTTACAACATTATTGGCCTATTAGAGACAATAGTAAATGCACCTCTCTTAAATTTGCTGTGGAATGGGGCAACAATCACACTCATAAGGCACAGTCAATAGGAGAGGCTGGTAGCAAATTCATACAAGAGGACTTAGACATGAAAAATGTATACAATTACATGTTTCATCTACTAAATGAATATGCAAAGCTTTTGAAGTTCAAACCAACTATACCTAGAGGAGCTGTGGAAATTTGTCCTGAAAAATTAATGACATGTGATGTAATGGGTGGTAACAAAAGGAGGTTCATGGAAGAGTCAATGGTGAAGGTTGCTAGTGATTCAAATCCATGCACTATTCCTCCTCCATATGATCCTTTAGATTTAGAAGAATTTTTAGGGAGAAAAGCTAATTCAATAATGCAGGTAGAAATTTGGGAAGATGAATATTGGCAGAGTAAAAACAAGGGACAATAA
Protein sequence

>Msa1450880

MNKDNETYLKLFWGGSNRHKRCFFTKKAKVTIATTTVVGLFCLVATFCDFAAWNTYIIAGNSIPNQNLSSIHISKNHKEQEFPLRCTNGEKTEKQTCPRDYPTKHNPTNLNSQTCPSYFRWIHEDLKPWREKGITREMLEGAKRTANFKVVIVDGKMYVEKYRKSIQTRDVFTLWGILQLLRMYPGKLPDLELMFDCEDRPVIHKANFQGPNASPPPLFRYCSDQWSLDIVFPDWSFWGWAETNIKPWKNTLKEIKEGNQQTKWKDRVPYAYWKGNPNVAATRKNLLKCNATSKDDWNTRLYIQDWDKESTQGYKKSSLGNQCTHRALILCALLEQLLKFKPTIPQGAVEFCSETMACDVIGTQRKFMEESMVKVPSDLNPCTIPPPYDPLTLHELLERKANSTRQASLDNVEGILDRDDDREASTGNSDGDGFLSLLMIAQGLRLSFLQEEKLCMFSKKAKVTCLVATFCAFAVWTVSVSIPFIHKDRLQDQEDFLLKCIQGKSFKQKCPRDYPTKHNPTNLNNHVCPSYFRWIHEDLKPWREKGITRNMLQKAKRTAHFKLVIVDGKMYVEKYRKSIQTRDVFTLWGILQLLRMYPGKLPDLELMFDCEDKPVVPLDKFQGPNASPPPLFRYCSDQLSLDIVFPDWSFWGWAETNIKPWKNILKVINEGNKKTKWKDRVPYAYWKGNPYVAPTRQNLLQCNVTLENDWNTLIYIQDWIQESNQGFNKSNLGDQCTHRYKIYIEGWAWSVSEKYIMACDSMTLYVKSNYHDFFIRGMVPLQHYWPIRDNSKCTSLKFAVEWGNNHTHKAQSIGEAGSKFIQEDLDMKNVYNYMFHLLNEYAKLLKFKPTIPRGAVEICPEKLMTCDVMGGNKRRFMEESMVKVASDSNPCTIPPPYDPLDLEEFLGRKANSIMQVEIWEDEYWQSKNKGQ*