Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174550 | sp|Q9STS3|CDC23_ARATH | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174550 | G7L7L4 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1174550 | Msa1235240 | 0.828975 | 6.665124e-55 | -8.615850e-47 |
| Msa1174550 | Msa1276720 | 0.987795 | 1.453971e-171 | -8.615850e-47 |
| Msa1174550 | Msa1443910 | 0.966833 | 1.879023e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174550 | MtrunA17_Chr8g0344341 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| Msa1174550 | MtrunA17_Chr1g0205411 | 86.528 | 579 | 73 | 4 | 1 | 576 | 1 | 577 | 0.0 | 1045 |
| Msa1174550 | MtrunA17_Chr8g0356451 | 75.862 | 87 | 21 | 0 | 419 | 505 | 1 | 87 | 7.96e-42 | 145 |
| Msa1174550 | MtrunA17_Chr6g0456451 | 28.159 | 277 | 190 | 2 | 270 | 546 | 460 | 727 | 7.71e-29 | 121 |
| Msa1174550 | MtrunA17_Chr7g0221321 | 27.055 | 292 | 203 | 3 | 255 | 546 | 444 | 725 | 2.85e-26 | 114 |
| Msa1174550 | MtrunA17_Chr8g0356461 | 77.778 | 63 | 11 | 2 | 517 | 576 | 1 | 63 | 4.60e-25 | 98.2 |
| Msa1174550 | MtrunA17_Chr2g0286231 | 25.543 | 184 | 135 | 2 | 234 | 417 | 211 | 392 | 5.00e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174550 | AT3G48150.1 | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| Msa1174550 | AT3G48150.2 | 73.978 | 465 | 119 | 1 | 114 | 576 | 1 | 465 | 0.0 | 750 |
| Msa1174550 | AT2G20000.1 | 27.243 | 301 | 210 | 2 | 255 | 555 | 434 | 725 | 2.68e-27 | 117 |
| Msa1174550 | AT3G16320.2 | 31.441 | 229 | 150 | 3 | 242 | 463 | 390 | 618 | 5.06e-27 | 116 |
| Msa1174550 | AT3G16320.1 | 31.441 | 229 | 150 | 3 | 242 | 463 | 401 | 629 | 5.51e-27 | 116 |
| Msa1174550 | AT2G20000.2 | 29.907 | 214 | 150 | 0 | 255 | 468 | 434 | 647 | 9.89e-27 | 115 |
| Msa1174550 | AT3G16320.4 | 31.944 | 144 | 96 | 1 | 242 | 383 | 401 | 544 | 2.15e-16 | 82.8 |
| Msa1174550 | AT3G16320.3 | 31.944 | 144 | 96 | 1 | 242 | 383 | 390 | 533 | 2.40e-16 | 82.8 |
Find 123 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 8_1:-5626172 | Msa1174550:CDS |
| CTATGATGACTAAACATATT+AGG | 0.175859 | 8_1:-5625130 | Msa1174550:three_prime_UTR |
| AAGATCTTATGCTCTTTATT+TGG | 0.192432 | 8_1:-5630712 | Msa1174550:intron |
| GGGAATTATTACAGTTTAAA+AGG | 0.197539 | 8_1:-5626151 | Msa1174550:CDS |
| TAGTAAAACGCTGCCTCTTC+AGG | 0.213627 | 8_1:+5625710 | None:intergenic |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 8_1:-5626171 | Msa1174550:CDS |
| CATTATGCATCCTTAATTCT+TGG | 0.262649 | 8_1:+5626446 | None:intergenic |
| TAGCTTCAGACTCATGTTCT+TGG | 0.268310 | 8_1:+5625172 | None:intergenic |
| GAATATCTACTCGGAACTTT+TGG | 0.287414 | 8_1:-5626406 | Msa1174550:CDS |
| CATGTTCTTCGTGATCAAAT+TGG | 0.290724 | 8_1:-5630753 | Msa1174550:CDS |
| TATCCGTCGTGAATACTCTA+TGG | 0.295435 | 8_1:+5626203 | None:intergenic |
| TCTGTTTCTCTTGCTCAATC+TGG | 0.299366 | 8_1:-5624967 | Msa1174550:three_prime_UTR |
| AGTGCTTCATTAGAGAAATT+AGG | 0.308119 | 8_1:+5625356 | None:intergenic |
| GTATGTGGCTACTCCGGTTA+TGG | 0.336064 | 8_1:-5630856 | Msa1174550:CDS |
| CTCTGAAACCTCGTGTTTGA+TGG | 0.342510 | 8_1:+5630954 | None:intergenic |
| TATGATGACTAAACATATTA+GGG | 0.343475 | 8_1:-5625129 | Msa1174550:three_prime_UTR |
| AGCAAGAGAAACAGAAAATC+AGG | 0.349057 | 8_1:+5624975 | None:intergenic |
| TTTGATGGAGTAAACTTAGA+TGG | 0.360770 | 8_1:+5630969 | None:intergenic |
| ATTTAAAATAGTTGTAGAAT+AGG | 0.360938 | 8_1:-5625040 | Msa1174550:three_prime_UTR |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 8_1:+5626172 | None:intergenic |
| GTCATCATAGAAGAGAATAA+AGG | 0.369455 | 8_1:+5625143 | None:intergenic |
| TGGAAACCAGATTACTACTT+TGG | 0.377991 | 8_1:+5625192 | None:intergenic |
| TCTTGCAGCCAAATGATTCT+CGG | 0.391224 | 8_1:-5625883 | Msa1174550:CDS |
| ACACGCCTTCTTGATTATAC+TGG | 0.393914 | 8_1:-5625563 | Msa1174550:CDS |
| TTGTGCTGCGTCAGAACTAA+TGG | 0.399708 | 8_1:-5625294 | Msa1174550:three_prime_UTR |
| GATAGAACTTGACGGACCTC+TGG | 0.399973 | 8_1:-5626758 | Msa1174550:CDS |
| CCAGTGCCTACCAAGAATTA+AGG | 0.405369 | 8_1:-5626456 | Msa1174550:CDS |
| ATGTTCTTCGTGATCAAATT+GGG | 0.413042 | 8_1:-5630752 | Msa1174550:CDS |
| AATTCATCCTCTTCCATAAC+CGG | 0.419596 | 8_1:+5630843 | None:intergenic |
| GGGTTTGAATAGATTGTCAT+TGG | 0.421580 | 8_1:+5624997 | None:intergenic |
| GTAAGTCCAAAGTAGTAATC+TGG | 0.428030 | 8_1:-5625198 | Msa1174550:three_prime_UTR |
| TCTCTCTGCTTGGACACTCA+TGG | 0.430654 | 8_1:-5626071 | Msa1174550:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | 8_1:-5626734 | Msa1174550:CDS |
| TGATCAAATTGGGAGGAAAT+CGG | 0.441059 | 8_1:-5630742 | Msa1174550:CDS |
| GTCTTAATCTCAATAGTCAT+TGG | 0.443586 | 8_1:-5626498 | Msa1174550:CDS |
| GCTATCAACTGTAGTGCATA+AGG | 0.444872 | 8_1:+5626528 | None:intergenic |
| CCGGCAATCGGTGTTGTTGT+TGG | 0.446248 | 8_1:+5630885 | None:intergenic |
| CCAACAACAACACCGATTGC+CGG | 0.446537 | 8_1:-5630885 | Msa1174550:CDS |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 8_1:-5626573 | Msa1174550:CDS |
| CAAATTCTCTCAAACTGTAC+TGG | 0.449897 | 8_1:+5626347 | None:intergenic |
| GTCTCTATTCCTCTTCCAAA+TGG | 0.454376 | 8_1:-5631235 | Msa1174550:intron |
| GAAGAGGATGAATTTGTTGA+TGG | 0.454661 | 8_1:-5630834 | Msa1174550:CDS |
| ATGCAGGGCAGCAGAGCAAT+TGG | 0.455938 | 8_1:-5631009 | Msa1174550:intron |
| CCAGCTTCGCATGCTCGATA+AGG | 0.459121 | 8_1:-5625825 | Msa1174550:CDS |
| AGGAATTCGTTTCATTAGAG+AGG | 0.459664 | 8_1:-5626714 | Msa1174550:CDS |
| ATCCACAACCGAGAATCATT+TGG | 0.460057 | 8_1:+5625875 | None:intergenic |
| CTGAATGCAGCTTCGCTAGT+TGG | 0.462339 | 8_1:+5625744 | None:intergenic |
| CTCTCTGCTTGGACACTCAT+GGG | 0.470449 | 8_1:-5626070 | Msa1174550:CDS |
| GATTGCCGGTGTTTCGTATG+TGG | 0.471511 | 8_1:-5630871 | Msa1174550:CDS |
| TCCAAGTCTTCCACTCTGTA+AGG | 0.474410 | 8_1:+5626283 | None:intergenic |
| CCTTATCGAGCATGCGAAGC+TGG | 0.477242 | 8_1:+5625825 | None:intergenic |
| TTGGCGTAATCTCATGTGTT+CGG | 0.485540 | 8_1:+5630904 | None:intergenic |
| CCTTAATTCTTGGTAGGCAC+TGG | 0.488674 | 8_1:+5626456 | None:intergenic |
| GAGTATGGAATCTGAAGAGA+GGG | 0.490455 | 8_1:-5625672 | Msa1174550:CDS |
| TAATTTCTCTAATGAAGCAC+TGG | 0.490963 | 8_1:-5625354 | Msa1174550:three_prime_UTR |
| ACAGAAAGGCAATGATACTT+TGG | 0.492080 | 8_1:-5626620 | Msa1174550:CDS |
| GGCTACTCCGGTTATGGAAG+AGG | 0.498305 | 8_1:-5630850 | Msa1174550:CDS |
| CCATATAAGTACAAAAGAAA+AGG | 0.501668 | 8_1:+5626655 | None:intergenic |
| TCCTTACAGAGTGGAAGACT+TGG | 0.506974 | 8_1:-5626284 | Msa1174550:CDS |
| TCTCTTGCTCAATCTGGTGA+AGG | 0.511345 | 8_1:-5624961 | Msa1174550:three_prime_UTR |
| CGCTGTGGATGCCTATCGTC+GGG | 0.517609 | 8_1:-5626014 | Msa1174550:CDS |
| GACGGACCTCACATGGTTGA+GGG | 0.518538 | 8_1:-5625650 | Msa1174550:CDS |
| TTTGGCACGCACAGTTCTTG+TGG | 0.519291 | 8_1:-5626602 | Msa1174550:CDS |
| TGTGATTATCGTGCTTGGTA+TGG | 0.521126 | 8_1:-5625974 | Msa1174550:CDS |
| CCGCTGTGGATGCCTATCGT+CGG | 0.525627 | 8_1:-5626015 | Msa1174550:CDS |
| GCGAAGCTGCATTCAGAGCT+CGG | 0.527303 | 8_1:-5625737 | Msa1174550:CDS |
| CGATAGGCATCCACAGCGGC+AGG | 0.530461 | 8_1:+5626019 | None:intergenic |
| ACATACGAAACACCGGCAAT+CGG | 0.530765 | 8_1:+5630873 | None:intergenic |
| CTCCAATGTTCTCTATGCTA+AGG | 0.531177 | 8_1:-5626254 | Msa1174550:CDS |
| AGGCAATAAAATGTTACAGA+AGG | 0.533908 | 8_1:-5625805 | Msa1174550:CDS |
| ACCCTTGGAACTGGAATGCA+TGG | 0.534200 | 8_1:-5626564 | Msa1174550:CDS |
| ATGCATCCTTAATTCTTGGT+AGG | 0.534236 | 8_1:+5626450 | None:intergenic |
| AGCCAAATGATTCTCGGTTG+TGG | 0.535639 | 8_1:-5625877 | Msa1174550:CDS |
| GGACGGACCTCACATGGTTG+AGG | 0.535859 | 8_1:-5625651 | Msa1174550:CDS |
| GTCCATGCATTCCAGTTCCA+AGG | 0.536564 | 8_1:+5626562 | None:intergenic |
| GGAATTCGTTTCATTAGAGA+GGG | 0.537497 | 8_1:-5626713 | Msa1174550:CDS |
| ACCCGTGTGATTATCGTGCT+TGG | 0.539237 | 8_1:-5625979 | Msa1174550:CDS |
| AGTAAGTTACCATTTGGAAG+AGG | 0.540515 | 8_1:+5631226 | None:intergenic |
| TTATCGTGCTTGGTATGGAC+TGG | 0.541413 | 8_1:-5625969 | Msa1174550:CDS |
| AGTAAAACGCTGCCTCTTCA+GGG | 0.544822 | 8_1:+5625711 | None:intergenic |
| TTCTCGGTTGTGGATAGCTA+TGG | 0.550619 | 8_1:-5625867 | Msa1174550:CDS |
| TCTCAATAGTCATTGGATGA+AGG | 0.551481 | 8_1:-5626491 | Msa1174550:CDS |
| AAGTAATGAAGTGAATAGAA+AGG | 0.552141 | 8_1:+5625920 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 8_1:-5626579 | Msa1174550:CDS |
| GGCAATAAAATGTTACAGAA+GGG | 0.556837 | 8_1:-5625804 | Msa1174550:CDS |
| ATAGAACTTGACGGACCTCT+GGG | 0.563134 | 8_1:-5626757 | Msa1174550:CDS |
| ATCCGTCGTGAATACTCTAT+GGG | 0.563752 | 8_1:+5626204 | None:intergenic |
| TTCCTTAGCATAGAGAACAT+TGG | 0.567573 | 8_1:+5626252 | None:intergenic |
| GGCCGGAGAAAAGCGAAAAG+AGG | 0.569695 | 8_1:-5626788 | Msa1174550:CDS |
| AGAGCTCGGACGCCCTGAAG+AGG | 0.573981 | 8_1:-5625723 | Msa1174550:CDS |
| GAAGAGTTGATAGAACTTGA+CGG | 0.586173 | 8_1:-5626766 | Msa1174550:CDS |
| TATATCAACAGCCCGACGAT+AGG | 0.587440 | 8_1:+5626003 | None:intergenic |
| TGTTTCGTATGTGGCTACTC+CGG | 0.589698 | 8_1:-5630862 | Msa1174550:CDS |
| GCAAGAGAAACAGAAAATCA+GGG | 0.598014 | 8_1:+5624976 | None:intergenic |
| GGTCTCATACTGAAACAGAA+AGG | 0.599721 | 8_1:-5626634 | Msa1174550:CDS |
| TCCATGCATTCCAGTTCCAA+GGG | 0.603030 | 8_1:+5626563 | None:intergenic |
| CTGGGCCAGTATAATCAAGA+AGG | 0.603911 | 8_1:+5625558 | None:intergenic |
| TATCGTGCTTGGTATGGACT+GGG | 0.604702 | 8_1:-5625968 | Msa1174550:CDS |
| AGTAGAATCAAATACAAGGT+GGG | 0.608330 | 8_1:+5624935 | None:intergenic |
| AGAGAGGGACGGACCTCACA+TGG | 0.611477 | 8_1:-5625657 | Msa1174550:CDS |
| CTATATTTGAAGATCTGTTG+AGG | 0.612589 | 8_1:-5626312 | Msa1174550:CDS |
| AGAGTATGGAATCTGAAGAG+AGG | 0.616817 | 8_1:-5625673 | Msa1174550:CDS |
| TAGAAGTAGAATCAAATACA+AGG | 0.618546 | 8_1:+5624931 | None:intergenic |
| CTTCATTAGAGAAATTAGGA+AGG | 0.619845 | 8_1:+5625360 | None:intergenic |
| AGCAAACCCTCAACCATGTG+AGG | 0.622036 | 8_1:+5625644 | None:intergenic |
| TCGAAATATGAATATCTACT+CGG | 0.623030 | 8_1:-5626415 | Msa1174550:CDS |
| AAAGTTTACTAAGAGGGATG+CGG | 0.625884 | 8_1:-5625419 | Msa1174550:CDS |
| TCGTGAATACTCTATGGGCA+AGG | 0.631954 | 8_1:+5626209 | None:intergenic |
| CAATGTAAAAGGGATACGAT+AGG | 0.634646 | 8_1:-5625089 | Msa1174550:three_prime_UTR |
| AGGGCAGCAGAGCAATTGGT+AGG | 0.639451 | 8_1:-5631005 | Msa1174550:CDS |
| CAGGGAGTAGGTAACATCGT+TGG | 0.640993 | 8_1:-5631332 | Msa1174550:five_prime_UTR |
| TACCAAGCACGATAATCACA+CGG | 0.642802 | 8_1:+5625977 | None:intergenic |
| TTCTTCGTGATCAAATTGGG+AGG | 0.645388 | 8_1:-5630749 | Msa1174550:CDS |
| ATGGAATCTGAAGAGAGGGA+CGG | 0.663753 | 8_1:-5625668 | Msa1174550:CDS |
| AAGTAGAATCAAATACAAGG+TGG | 0.668154 | 8_1:+5624934 | None:intergenic |
| CAAGAGAAACAGAAAATCAG+GGG | 0.674338 | 8_1:+5624977 | None:intergenic |
| AGTTTACTCCATCAAACACG+AGG | 0.685167 | 8_1:-5630962 | Msa1174550:CDS |
| AGTAGCCACATACGAAACAC+CGG | 0.691312 | 8_1:+5630866 | None:intergenic |
| ACCAAGCACGATAATCACAC+GGG | 0.697673 | 8_1:+5625978 | None:intergenic |
| GAGGACTGATCCTTACAGAG+TGG | 0.728386 | 8_1:-5626293 | Msa1174550:CDS |
| TGCCCATAGAGTATTCACGA+CGG | 0.777322 | 8_1:-5626206 | Msa1174550:CDS |
| CCGACGATAGGCATCCACAG+CGG | 0.791397 | 8_1:+5626015 | None:intergenic |
| TCAAACACGAGGTTTCAGAG+AGG | 0.797609 | 8_1:-5630951 | Msa1174550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAGAAATATTGTAT+TGG | - | chr8_1:5626751-5626770 | Msa1174550:CDS | 10.0% |
| !! | ATTGTTTATATATAAACAAA+CGG | - | chr8_1:5626984-5627003 | Msa1174550:intron | 10.0% |
| !!! | AAAAATCAGTTATATATTTT+AGG | - | chr8_1:5630101-5630120 | Msa1174550:intron | 10.0% |
| !!! | ATAAGCTTTTATAATTACTT+AGG | + | chr8_1:5626626-5626645 | None:intergenic | 15.0% |
| !!! | AGCTTATTTTGAAAATATTA+AGG | - | chr8_1:5626639-5626658 | Msa1174550:CDS | 15.0% |
| !!! | AACTTGCATATAAATTTTTT+GGG | + | chr8_1:5628856-5628875 | None:intergenic | 15.0% |
| !!! | TAACTTGCATATAAATTTTT+TGG | + | chr8_1:5628857-5628876 | None:intergenic | 15.0% |
| !! | TTTATTTAAATGTTACTCAA+GGG | + | chr8_1:5629245-5629264 | None:intergenic | 15.0% |
| !! | ATTTATTTAAATGTTACTCA+AGG | + | chr8_1:5629246-5629265 | None:intergenic | 15.0% |
| !!! | ATAATTTTTGTTCAGTTTAA+GGG | + | chr8_1:5630131-5630150 | None:intergenic | 15.0% |
| !!! | ACTATTTTAAATCAAAAACA+TGG | + | chr8_1:5631173-5631192 | None:intergenic | 15.0% |
| !!! | ATTTAAAATAGTTGTAGAAT+AGG | - | chr8_1:5631181-5631200 | Msa1174550:intron | 15.0% |
| !! | AACATAAACATAGCAAAATA+GGG | + | chr8_1:5625561-5625580 | None:intergenic | 20.0% |
| !! | AAACATAAACATAGCAAAAT+AGG | + | chr8_1:5625562-5625581 | None:intergenic | 20.0% |
| !!! | AAGAATTGATTTTGAATTGT+AGG | - | chr8_1:5625682-5625701 | Msa1174550:CDS | 20.0% |
| !! | CTGTATATATGATAATAGAT+TGG | + | chr8_1:5626042-5626061 | None:intergenic | 20.0% |
| !!! | CTATCTGATTTTTAAAAGAA+TGG | + | chr8_1:5626311-5626330 | None:intergenic | 20.0% |
| !! | TTATACCTATATGTTATACT+AGG | - | chr8_1:5626496-5626515 | Msa1174550:CDS | 20.0% |
| !! | TATACCTATATGTTATACTA+GGG | - | chr8_1:5626497-5626516 | Msa1174550:CDS | 20.0% |
| !!! | ATTCGTTTAAGATTAAACAA+AGG | - | chr8_1:5626688-5626707 | Msa1174550:CDS | 20.0% |
| !!! | TTCGTTTAAGATTAAACAAA+GGG | - | chr8_1:5626689-5626708 | Msa1174550:CDS | 20.0% |
| !! | AGAAATATTGTATTGGAAAA+TGG | - | chr8_1:5626758-5626777 | Msa1174550:CDS | 20.0% |
| !! | ACAAAAAGTCTTAATACATT+TGG | + | chr8_1:5627055-5627074 | None:intergenic | 20.0% |
| !!! | AGAGTTTGATTTTTTATATC+TGG | - | chr8_1:5627125-5627144 | Msa1174550:intron | 20.0% |
| !!! | GAGTTTGATTTTTTATATCT+GGG | - | chr8_1:5627126-5627145 | Msa1174550:intron | 20.0% |
| !!! | TGTGTTAAATTCAATTTTTG+TGG | - | chr8_1:5627269-5627288 | Msa1174550:intron | 20.0% |
| !!! | GTGTTAAATTCAATTTTTGT+GGG | - | chr8_1:5627270-5627289 | Msa1174550:intron | 20.0% |
| !!! | GGCTGTAATTTTATATATTT+AGG | - | chr8_1:5627451-5627470 | Msa1174550:intron | 20.0% |
| !! | TTAAATCTGATAATTTCTGT+TGG | - | chr8_1:5628267-5628286 | Msa1174550:intron | 20.0% |
| !! | AACACTAAAAATTAAAACAC+TGG | - | chr8_1:5628352-5628371 | Msa1174550:intron | 20.0% |
| !!! | AACTATTTCTTACTTATACA+AGG | + | chr8_1:5628616-5628635 | None:intergenic | 20.0% |
| !! | AATGACGAGATTAAAAAATA+TGG | - | chr8_1:5628653-5628672 | Msa1174550:intron | 20.0% |
| !!! | TAATAGTAGTAACTTTTTCT+TGG | + | chr8_1:5628794-5628813 | None:intergenic | 20.0% |
| !! | AGAAAACATTCTCTTAAAAA+GGG | + | chr8_1:5629086-5629105 | None:intergenic | 20.0% |
| !! | TTATTTAAATGTTACTCAAG+GGG | + | chr8_1:5629244-5629263 | None:intergenic | 20.0% |
| !!! | GATAATTTTTGTTCAGTTTA+AGG | + | chr8_1:5630132-5630151 | None:intergenic | 20.0% |
| !! | TATGATGACTAAACATATTA+GGG | - | chr8_1:5631092-5631111 | Msa1174550:intron | 20.0% |
| !!! | TGATTTTGTAACAATGTAAA+AGG | - | chr8_1:5631121-5631140 | Msa1174550:intron | 20.0% |
| !!! | GATTTTGTAACAATGTAAAA+GGG | - | chr8_1:5631122-5631141 | Msa1174550:intron | 20.0% |
| ! | AAGATCTTATGCTCTTTATT+TGG | - | chr8_1:5625509-5625528 | Msa1174550:intron | 25.0% |
| ! | CAAACATACACTAAACATTA+TGG | + | chr8_1:5625650-5625669 | None:intergenic | 25.0% |
| ! | CATAATGTTTAGTGTATGTT+TGG | - | chr8_1:5625648-5625667 | Msa1174550:CDS | 25.0% |
| ! | ATAGGATGACAAAATTTATG+TGG | + | chr8_1:5626115-5626134 | None:intergenic | 25.0% |
| !! | ACATAAATTTTGTCATCCTA+TGG | - | chr8_1:5626114-5626133 | Msa1174550:CDS | 25.0% |
| ! | CATTTAAAGAAACAGTAATG+AGG | + | chr8_1:5626164-5626183 | None:intergenic | 25.0% |
| !! | AGCTTTTATAATTACTTAGG+TGG | + | chr8_1:5626623-5626642 | None:intergenic | 25.0% |
| ! | TATATATAAACAAACGGCTT+TGG | - | chr8_1:5626990-5627009 | Msa1174550:intron | 25.0% |
| ! | ATATATAAACAAACGGCTTT+GGG | - | chr8_1:5626991-5627010 | Msa1174550:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTCCTTG+TGG | - | chr8_1:5627069-5627088 | Msa1174550:intron | 25.0% |
| ! | TTGTAATTTAGTACAACCTT+TGG | - | chr8_1:5627183-5627202 | Msa1174550:intron | 25.0% |
| ! | GCATAATTAATCAGTCTATT+TGG | + | chr8_1:5627335-5627354 | None:intergenic | 25.0% |
| !!! | ATTAATTATGCTGATTCTGT+TGG | - | chr8_1:5627344-5627363 | Msa1174550:intron | 25.0% |
| ! | AAATCCTATGATGTCAATAA+TGG | + | chr8_1:5627702-5627721 | None:intergenic | 25.0% |
| !! | TATTGACATCATAGGATTTT+TGG | - | chr8_1:5627703-5627722 | Msa1174550:intron | 25.0% |
| ! | ATCATGTGAATTATGTAGTA+AGG | - | chr8_1:5627755-5627774 | Msa1174550:intron | 25.0% |
| ! | AAACTATACGAGAAACTATT+AGG | - | chr8_1:5627833-5627852 | Msa1174550:intron | 25.0% |
| ! | ACAGAACATATAACAACATT+AGG | - | chr8_1:5628022-5628041 | Msa1174550:intron | 25.0% |
| !! | AATTACTGATTAGAGAGATA+AGG | - | chr8_1:5628308-5628327 | Msa1174550:intron | 25.0% |
| !!! | TACTATCCCAGTTTTATTTA+CGG | + | chr8_1:5628557-5628576 | None:intergenic | 25.0% |
| !!! | ATCTCGTCATTTTTTTTTTC+TGG | + | chr8_1:5628644-5628663 | None:intergenic | 25.0% |
| ! | GAAAAATCTGAAGATTGTTT+GGG | + | chr8_1:5629036-5629055 | None:intergenic | 25.0% |
| ! | AGAAAAATCTGAAGATTGTT+TGG | + | chr8_1:5629037-5629056 | None:intergenic | 25.0% |
| ! | CAGAAAACATTCTCTTAAAA+AGG | + | chr8_1:5629087-5629106 | None:intergenic | 25.0% |
| ! | TTAACAAAAGTAAGCATAAG+TGG | + | chr8_1:5629110-5629129 | None:intergenic | 25.0% |
| ! | TATATAGCATGATTAAGACT+GGG | + | chr8_1:5629135-5629154 | None:intergenic | 25.0% |
| ! | TTATATAGCATGATTAAGAC+TGG | + | chr8_1:5629136-5629155 | None:intergenic | 25.0% |
| ! | CCATATAAGTACAAAAGAAA+AGG | + | chr8_1:5629569-5629588 | None:intergenic | 25.0% |
| !! | CCTTTTCTTTTGTACTTATA+TGG | - | chr8_1:5629566-5629585 | Msa1174550:intron | 25.0% |
| ! | TCGAAATATGAATATCTACT+CGG | - | chr8_1:5629806-5629825 | Msa1174550:intron | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | - | chr8_1:5630050-5630069 | Msa1174550:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+AGG | - | chr8_1:5630070-5630089 | Msa1174550:intron | 25.0% |
| ! | AAGTAATGAAGTGAATAGAA+AGG | + | chr8_1:5630304-5630323 | None:intergenic | 25.0% |
| !!! | AGTCATATTTTTTACTCACT+GGG | + | chr8_1:5630684-5630703 | None:intergenic | 25.0% |
| !!! | TAGTCATATTTTTTACTCAC+TGG | + | chr8_1:5630685-5630704 | None:intergenic | 25.0% |
| ! | TCATACTAAATCATTCTTTC+AGG | - | chr8_1:5630764-5630783 | Msa1174550:CDS | 25.0% |
| ! | CTATGATGACTAAACATATT+AGG | - | chr8_1:5631091-5631110 | Msa1174550:intron | 25.0% |
| ! | TAGAAGTAGAATCAAATACA+AGG | + | chr8_1:5631293-5631312 | None:intergenic | 25.0% |
| AGTTAGAGTAAGTTACCATT+TGG | + | chr8_1:5625004-5625023 | None:intergenic | 30.0% | |
| GAAGGAGAATGAAAATGAAA+TGG | + | chr8_1:5625188-5625207 | None:intergenic | 30.0% | |
| TTTGATGGAGTAAACTTAGA+TGG | + | chr8_1:5625255-5625274 | None:intergenic | 30.0% | |
| !! | TGATGGTGATTTTTATCTGT+TGG | - | chr8_1:5625404-5625423 | Msa1174550:CDS | 30.0% |
| ATGTTCTTCGTGATCAAATT+GGG | - | chr8_1:5625469-5625488 | Msa1174550:intron | 30.0% | |
| ! | TAGGTAAAGTGATTTGTGTT+TGG | - | chr8_1:5625701-5625720 | Msa1174550:CDS | 30.0% |
| ! | AGGTAAAGTGATTTGTGTTT+GGG | - | chr8_1:5625702-5625721 | Msa1174550:CDS | 30.0% |
| TCCTAAAGTAGAAACAATTC+CGG | - | chr8_1:5625801-5625820 | Msa1174550:CDS | 30.0% | |
| !! | AGTAGAATTGATTTTGTCTC+CGG | + | chr8_1:5625823-5625842 | None:intergenic | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | - | chr8_1:5625874-5625893 | Msa1174550:CDS | 30.0% |
| !! | ATGTTGGCTTAGTATATGTT+TGG | + | chr8_1:5625917-5625936 | None:intergenic | 30.0% |
| ACATATACTAAGCCAACATA+TGG | - | chr8_1:5625918-5625937 | Msa1174550:CDS | 30.0% | |
| ! | GGACAAATTTTACACATGAT+TGG | - | chr8_1:5625951-5625970 | Msa1174550:CDS | 30.0% |
| !! | TTTTGGCTGATTTAAATGCA+TGG | + | chr8_1:5626342-5626361 | None:intergenic | 30.0% |
| TGCATTTAAATCAGCCAAAA+TGG | - | chr8_1:5626342-5626361 | Msa1174550:CDS | 30.0% | |
| !!! | CAGCCAAAATGGTTTTAAAT+AGG | - | chr8_1:5626353-5626372 | Msa1174550:CDS | 30.0% |
| !!! | CCAAAATGGTTTTAAATAGG+CGG | - | chr8_1:5626356-5626375 | Msa1174550:CDS | 30.0% |
| TAGACCCTAGTATAACATAT+AGG | + | chr8_1:5626504-5626523 | None:intergenic | 30.0% | |
| CAAAATCTGCCATATAAACA+TGG | + | chr8_1:5626548-5626567 | None:intergenic | 30.0% | |
| ! | CATGTTTATATGGCAGATTT+TGG | - | chr8_1:5626546-5626565 | Msa1174550:CDS | 30.0% |
| TATTGGATAGCAGAATATCA+TGG | + | chr8_1:5626576-5626595 | None:intergenic | 30.0% | |
| GACATCAGTGTTATCAATAT+TGG | + | chr8_1:5626593-5626612 | None:intergenic | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | + | chr8_1:5626831-5626850 | None:intergenic | 30.0% | |
| AGCATAACCCTTAAACAAAT+TGG | - | chr8_1:5626886-5626905 | Msa1174550:intron | 30.0% | |
| ! | TTAAGGGCCAATTTGTTTAA+GGG | + | chr8_1:5626896-5626915 | None:intergenic | 30.0% |
| ! | TGGGTTTTCATATTAATCAG+TGG | - | chr8_1:5627010-5627029 | Msa1174550:intron | 30.0% |
| ! | GGGTTTTCATATTAATCAGT+GGG | - | chr8_1:5627011-5627030 | Msa1174550:intron | 30.0% |
| !!! | AAGAGCATTTCTTGTTTTTG+TGG | + | chr8_1:5627582-5627601 | None:intergenic | 30.0% |
| ! | GTTTCTCGTATAGTTTTTCT+AGG | + | chr8_1:5627829-5627848 | None:intergenic | 30.0% |
| TATACGAGAAACTATTAGGA+AGG | - | chr8_1:5627837-5627856 | Msa1174550:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr8_1:5627890-5627909 | Msa1174550:intron | 30.0% |
| ATGTCCTATAATTGTTGAAG+TGG | - | chr8_1:5627983-5628002 | Msa1174550:intron | 30.0% | |
| TGTCCTATAATTGTTGAAGT+GGG | - | chr8_1:5627984-5628003 | Msa1174550:intron | 30.0% | |
| AACATTAGGCAAGAATATAG+AGG | - | chr8_1:5628036-5628055 | Msa1174550:intron | 30.0% | |
| ACATTAGGCAAGAATATAGA+GGG | - | chr8_1:5628037-5628056 | Msa1174550:intron | 30.0% | |
| !! | CTGATTATAATTTTGATCCC+AGG | + | chr8_1:5628238-5628257 | None:intergenic | 30.0% |
| GTATTACTTACACAACTTCA+CGG | + | chr8_1:5628453-5628472 | None:intergenic | 30.0% | |
| TATTTACGGAAGACATTGTT+GGG | + | chr8_1:5628543-5628562 | None:intergenic | 30.0% | |
| TTATTTACGGAAGACATTGT+TGG | + | chr8_1:5628544-5628563 | None:intergenic | 30.0% | |
| ATGTCTTCCGTAAATAAAAC+TGG | - | chr8_1:5628547-5628566 | Msa1174550:intron | 30.0% | |
| TGTCTTCCGTAAATAAAACT+GGG | - | chr8_1:5628548-5628567 | Msa1174550:intron | 30.0% | |
| GTAAATAAAACTGGGATAGT+AGG | - | chr8_1:5628556-5628575 | Msa1174550:intron | 30.0% | |
| TATATGCAAGTTAAACCATG+AGG | - | chr8_1:5628864-5628883 | Msa1174550:intron | 30.0% | |
| ! | GCAATTTTTCTACTGCAAAA+AGG | + | chr8_1:5628917-5628936 | None:intergenic | 30.0% |
| AAATATAATGCATTGAGCTC+TGG | - | chr8_1:5629262-5629281 | Msa1174550:intron | 30.0% | |
| GTCTTAATCTCAATAGTCAT+TGG | - | chr8_1:5629723-5629742 | Msa1174550:intron | 30.0% | |
| CATTATGCATCCTTAATTCT+TGG | + | chr8_1:5629778-5629797 | None:intergenic | 30.0% | |
| CTATATTTGAAGATCTGTTG+AGG | - | chr8_1:5629909-5629928 | Msa1174550:intron | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | + | chr8_1:5630052-5630071 | None:intergenic | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | - | chr8_1:5630049-5630068 | Msa1174550:intron | 30.0% |
| ACAAAAATTATCTCTCTGCT+TGG | - | chr8_1:5630140-5630159 | Msa1174550:intron | 30.0% | |
| AGGCAATAAAATGTTACAGA+AGG | - | chr8_1:5630416-5630435 | Msa1174550:intron | 30.0% | |
| GGCAATAAAATGTTACAGAA+GGG | - | chr8_1:5630417-5630436 | Msa1174550:intron | 30.0% | |
| CAAAAAAGAGTTAGAGAGTA+TGG | - | chr8_1:5630534-5630553 | Msa1174550:intron | 30.0% | |
| AAAAAGATTTGAAGAAGCAG+AGG | - | chr8_1:5630627-5630646 | Msa1174550:intron | 30.0% | |
| TAAATCATTCTTTCAGGAGA+GGG | - | chr8_1:5630770-5630789 | Msa1174550:CDS | 30.0% | |
| ACAGCAAAAAGTTTACTAAG+AGG | - | chr8_1:5630795-5630814 | Msa1174550:CDS | 30.0% | |
| CAGCAAAAAGTTTACTAAGA+GGG | - | chr8_1:5630796-5630815 | Msa1174550:CDS | 30.0% | |
| CTTCATTAGAGAAATTAGGA+AGG | + | chr8_1:5630864-5630883 | None:intergenic | 30.0% | |
| AGTGCTTCATTAGAGAAATT+AGG | + | chr8_1:5630868-5630887 | None:intergenic | 30.0% | |
| TAATTTCTCTAATGAAGCAC+TGG | - | chr8_1:5630867-5630886 | Msa1174550:CDS | 30.0% | |
| GTCATCATAGAAGAGAATAA+AGG | + | chr8_1:5631081-5631100 | None:intergenic | 30.0% | |
| AGTAGAATCAAATACAAGGT+GGG | + | chr8_1:5631289-5631308 | None:intergenic | 30.0% | |
| AAGTAGAATCAAATACAAGG+TGG | + | chr8_1:5631290-5631309 | None:intergenic | 30.0% | |
| AGTAAGTTACCATTTGGAAG+AGG | + | chr8_1:5624998-5625017 | None:intergenic | 35.0% | |
| AATTCATCCTCTTCCATAAC+CGG | + | chr8_1:5625381-5625400 | None:intergenic | 35.0% | |
| !! | GAAGAGGATGAATTTGTTGA+TGG | - | chr8_1:5625387-5625406 | Msa1174550:CDS | 35.0% |
| CATGTTCTTCGTGATCAAAT+TGG | - | chr8_1:5625468-5625487 | Msa1174550:intron | 35.0% | |
| TGATCAAATTGGGAGGAAAT+CGG | - | chr8_1:5625479-5625498 | Msa1174550:intron | 35.0% | |
| !! | TACCAACAATGCTTTGAAGT+TGG | - | chr8_1:5625613-5625632 | Msa1174550:CDS | 35.0% |
| !! | TCCGGAATTGTTTCTACTTT+AGG | + | chr8_1:5625805-5625824 | None:intergenic | 35.0% |
| AGAATTGATCCTAGCATGTT+TGG | + | chr8_1:5625855-5625874 | None:intergenic | 35.0% | |
| !! | TGTTTGGTTCCACTTTTAGA+GGG | + | chr8_1:5625901-5625920 | None:intergenic | 35.0% |
| !! | ATGTTTGGTTCCACTTTTAG+AGG | + | chr8_1:5625902-5625921 | None:intergenic | 35.0% |
| !! | CCGCCTATTTAAAACCATTT+TGG | + | chr8_1:5626359-5626378 | None:intergenic | 35.0% |
| ! | TGTCATTGAACTTGTTCATC+AGG | + | chr8_1:5626474-5626493 | None:intergenic | 35.0% |
| !! | TTTATATGGCAGATTTTGGC+TGG | - | chr8_1:5626550-5626569 | Msa1174550:CDS | 35.0% |
| !! | TAATTACTTAGGTGGACTAC+TGG | + | chr8_1:5626615-5626634 | None:intergenic | 35.0% |
| ! | CGAATGTTCTTGACTTTTGA+AGG | + | chr8_1:5626673-5626692 | None:intergenic | 35.0% |
| CAAAAGTAGTAGGTTTGCAT+TGG | + | chr8_1:5626821-5626840 | None:intergenic | 35.0% | |
| ! | CAATGCAAACCTACTACTTT+TGG | - | chr8_1:5626819-5626838 | Msa1174550:intron | 35.0% |
| ! | CTTAAGGGCCAATTTGTTTA+AGG | + | chr8_1:5626897-5626916 | None:intergenic | 35.0% |
| ! | TTTTGTGGGCAAGTCTATTT+TGG | - | chr8_1:5627284-5627303 | Msa1174550:intron | 35.0% |
| ! | TTTGTGGGCAAGTCTATTTT+GGG | - | chr8_1:5627285-5627304 | Msa1174550:intron | 35.0% |
| !!! | TCTGTTGGATTCCTTTTTTG+CGG | - | chr8_1:5627359-5627378 | Msa1174550:intron | 35.0% |
| GTTGCCATTATTGACATCAT+AGG | - | chr8_1:5627695-5627714 | Msa1174550:intron | 35.0% | |
| AGTCAAATCACTAGAGGTAA+GGG | - | chr8_1:5627799-5627818 | Msa1174550:intron | 35.0% | |
| GGATCTAGAGATAAATGAGT+TGG | - | chr8_1:5627858-5627877 | Msa1174550:intron | 35.0% | |
| ! | AAATGAGTTGGAGAAAGACA+TGG | - | chr8_1:5627870-5627889 | Msa1174550:intron | 35.0% |
| GTCCTATAATTGTTGAAGTG+GGG | - | chr8_1:5627985-5628004 | Msa1174550:intron | 35.0% | |
| AACCCCACTTCAACAATTAT+AGG | + | chr8_1:5627990-5628009 | None:intergenic | 35.0% | |
| ! | ACATTTTACACCTCACACAA+GGG | + | chr8_1:5628131-5628150 | None:intergenic | 35.0% |
| ! | ATGTGTGATGCATTTTGCTA+TGG | - | chr8_1:5628187-5628206 | Msa1174550:intron | 35.0% |
| ! | CATGTCCTTCCTTAATTTGA+AGG | + | chr8_1:5628215-5628234 | None:intergenic | 35.0% |
| AGAAGAAACACCAACTTTGA+AGG | + | chr8_1:5628384-5628403 | None:intergenic | 35.0% | |
| ATTTACGGAAGACATTGTTG+GGG | + | chr8_1:5628542-5628561 | None:intergenic | 35.0% | |
| AAAACTGGGATAGTAGGTAT+TGG | - | chr8_1:5628562-5628581 | Msa1174550:intron | 35.0% | |
| AAACGACTGAGTTTGGTATT+TGG | + | chr8_1:5628969-5628988 | None:intergenic | 35.0% | |
| CAAATAGAAACGACTGAGTT+TGG | + | chr8_1:5628976-5628995 | None:intergenic | 35.0% | |
| TTAAATGTTACTCAAGGGGA+TGG | + | chr8_1:5629240-5629259 | None:intergenic | 35.0% | |
| !! | GAAGAGTTGATAGAACTTGA+CGG | - | chr8_1:5629455-5629474 | Msa1174550:intron | 35.0% |
| TAAAAGTGATGCTGTGAATC+AGG | - | chr8_1:5629487-5629506 | Msa1174550:intron | 35.0% | |
| AGGAATTCGTTTCATTAGAG+AGG | - | chr8_1:5629507-5629526 | Msa1174550:intron | 35.0% | |
| GGAATTCGTTTCATTAGAGA+GGG | - | chr8_1:5629508-5629527 | Msa1174550:intron | 35.0% | |
| ACAGAAAGGCAATGATACTT+TGG | - | chr8_1:5629601-5629620 | Msa1174550:intron | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | - | chr8_1:5629642-5629661 | Msa1174550:intron | 35.0% | |
| TCTCAATAGTCATTGGATGA+AGG | - | chr8_1:5629730-5629749 | Msa1174550:intron | 35.0% | |
| ATGCATCCTTAATTCTTGGT+AGG | + | chr8_1:5629774-5629793 | None:intergenic | 35.0% | |
| ! | GAATATCTACTCGGAACTTT+TGG | - | chr8_1:5629815-5629834 | Msa1174550:intron | 35.0% |
| CAAATTCTCTCAAACTGTAC+TGG | + | chr8_1:5629877-5629896 | None:intergenic | 35.0% | |
| TTCCTTAGCATAGAGAACAT+TGG | + | chr8_1:5629972-5629991 | None:intergenic | 35.0% | |
| CTAAATCATTCTTTCAGGAG+AGG | - | chr8_1:5630769-5630788 | Msa1174550:CDS | 35.0% | |
| AAAGTTTACTAAGAGGGATG+CGG | - | chr8_1:5630802-5630821 | Msa1174550:CDS | 35.0% | |
| ! | CACTGGTGCATTTTACATTT+TGG | - | chr8_1:5630884-5630903 | Msa1174550:CDS | 35.0% |
| GTAAGTCCAAAGTAGTAATC+TGG | - | chr8_1:5631023-5631042 | Msa1174550:intron | 35.0% | |
| TGGAAACCAGATTACTACTT+TGG | + | chr8_1:5631032-5631051 | None:intergenic | 35.0% | |
| CAATGTAAAAGGGATACGAT+AGG | - | chr8_1:5631132-5631151 | Msa1174550:intron | 35.0% | |
| GGGTTTGAATAGATTGTCAT+TGG | + | chr8_1:5631227-5631246 | None:intergenic | 35.0% | |
| CAAGAGAAACAGAAAATCAG+GGG | + | chr8_1:5631247-5631266 | None:intergenic | 35.0% | |
| GCAAGAGAAACAGAAAATCA+GGG | + | chr8_1:5631248-5631267 | None:intergenic | 35.0% | |
| AGCAAGAGAAACAGAAAATC+AGG | + | chr8_1:5631249-5631268 | None:intergenic | 35.0% | |
| !! | TTCTTCTGCTTTTACAGTTC+TGG | - | chr8_1:5631320-5631339 | Msa1174550:exon | 35.0% |
| GTCTCTATTCCTCTTCCAAA+TGG | - | chr8_1:5624986-5625005 | Msa1174550:three_prime_UTR | 40.0% | |
| TCATTCTCCTTCCTTAATGC+AGG | - | chr8_1:5625196-5625215 | Msa1174550:three_prime_UTR | 40.0% | |
| CATTCTCCTTCCTTAATGCA+GGG | - | chr8_1:5625197-5625216 | Msa1174550:three_prime_UTR | 40.0% | |
| AGTTTACTCCATCAAACACG+AGG | - | chr8_1:5625259-5625278 | Msa1174550:three_prime_UTR | 40.0% | |
| TTGGCGTAATCTCATGTGTT+CGG | + | chr8_1:5625320-5625339 | None:intergenic | 40.0% | |
| TTCTTCGTGATCAAATTGGG+AGG | - | chr8_1:5625472-5625491 | Msa1174550:intron | 40.0% | |
| !! | GTCCAACTTCAAAGCATTGT+TGG | + | chr8_1:5625618-5625637 | None:intergenic | 40.0% |
| !! | AATTTTGGCCCCTCTAAAAG+TGG | - | chr8_1:5625889-5625908 | Msa1174550:CDS | 40.0% |
| !! | GTTTGGTTCCACTTTTAGAG+GGG | + | chr8_1:5625900-5625919 | None:intergenic | 40.0% |
| AACCGATCGTATATTCGAAC+TGG | - | chr8_1:5626003-5626022 | Msa1174550:CDS | 40.0% | |
| ACCGATCGTATATTCGAACT+GGG | - | chr8_1:5626004-5626023 | Msa1174550:CDS | 40.0% | |
| ACCCAGTTCGAATATACGAT+CGG | + | chr8_1:5626008-5626027 | None:intergenic | 40.0% | |
| AATGAGGTGAAAAGCTCAGA+AGG | + | chr8_1:5626148-5626167 | None:intergenic | 40.0% | |
| TATTCACGCACAACAGTTAC+TGG | + | chr8_1:5626286-5626305 | None:intergenic | 40.0% | |
| ! | ACTGTTCAGGGCATTTGTTA+AGG | + | chr8_1:5626848-5626867 | None:intergenic | 40.0% |
| AACAAATTGGCCCTTAAGCT+AGG | - | chr8_1:5626899-5626918 | Msa1174550:intron | 40.0% | |
| ACAAATTGGCCCTTAAGCTA+GGG | - | chr8_1:5626900-5626919 | Msa1174550:intron | 40.0% | |
| AAAAGAAGCCCCTAGCTTAA+GGG | + | chr8_1:5626912-5626931 | None:intergenic | 40.0% | |
| ! | ACTTAGATGTAGTGGCGTTT+TGG | - | chr8_1:5627092-5627111 | Msa1174550:intron | 40.0% |
| AACCTTTGGTAAAGACGAGA+TGG | - | chr8_1:5627197-5627216 | Msa1174550:intron | 40.0% | |
| AACCATCTCGTCTTTACCAA+AGG | + | chr8_1:5627202-5627221 | None:intergenic | 40.0% | |
| AAGACGAGATGGTTATGTGA+AGG | - | chr8_1:5627208-5627227 | Msa1174550:intron | 40.0% | |
| !!! | CTGTTGGATTCCTTTTTTGC+GGG | - | chr8_1:5627360-5627379 | Msa1174550:intron | 40.0% |
| ACAGCAAAAACCCGCAAAAA+AGG | + | chr8_1:5627373-5627392 | None:intergenic | 40.0% | |
| AAGAAATGCTCTTGTGAACG+CGG | - | chr8_1:5627589-5627608 | Msa1174550:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | - | chr8_1:5627771-5627790 | Msa1174550:intron | 40.0% | |
| GAGTCAAATCACTAGAGGTA+AGG | - | chr8_1:5627798-5627817 | Msa1174550:intron | 40.0% | |
| CTTATCCTACTAAGTGAGGT+CGG | + | chr8_1:5627935-5627954 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCTACTAAGTG+AGG | + | chr8_1:5627939-5627958 | None:intergenic | 40.0% |
| TCACTTAGTAGGATAAGGCT+TGG | - | chr8_1:5627938-5627957 | Msa1174550:intron | 40.0% | |
| ! | TAAGGCTTGGTTGTTGTTGT+TGG | - | chr8_1:5627951-5627970 | Msa1174550:intron | 40.0% |
| ! | CACATTTTACACCTCACACA+AGG | + | chr8_1:5628132-5628151 | None:intergenic | 40.0% |
| GCTATGGTGCCTTCAAATTA+AGG | - | chr8_1:5628203-5628222 | Msa1174550:intron | 40.0% | |
| TGGTGCCTTCAAATTAAGGA+AGG | - | chr8_1:5628207-5628226 | Msa1174550:intron | 40.0% | |
| AAATTAAGGAAGGACATGCC+TGG | - | chr8_1:5628217-5628236 | Msa1174550:intron | 40.0% | |
| AATTAAGGAAGGACATGCCT+GGG | - | chr8_1:5628218-5628237 | Msa1174550:intron | 40.0% | |
| !! | TTCCTCTTTTCGCTTTTCTC+CGG | + | chr8_1:5629438-5629457 | None:intergenic | 40.0% |
| GGTCTCATACTGAAACAGAA+AGG | - | chr8_1:5629587-5629606 | Msa1174550:intron | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | - | chr8_1:5629648-5629667 | Msa1174550:intron | 40.0% | |
| GCTATCAACTGTAGTGCATA+AGG | + | chr8_1:5629696-5629715 | None:intergenic | 40.0% | |
| CTCCAATGTTCTCTATGCTA+AGG | - | chr8_1:5629967-5629986 | Msa1174550:intron | 40.0% | |
| ATCCGTCGTGAATACTCTAT+GGG | + | chr8_1:5630020-5630039 | None:intergenic | 40.0% | |
| TATCCGTCGTGAATACTCTA+TGG | + | chr8_1:5630021-5630040 | None:intergenic | 40.0% | |
| TACCAAGCACGATAATCACA+CGG | + | chr8_1:5630247-5630266 | None:intergenic | 40.0% | |
| TGTGATTATCGTGCTTGGTA+TGG | - | chr8_1:5630247-5630266 | Msa1174550:intron | 40.0% | |
| TCTTGCAGCCAAATGATTCT+CGG | - | chr8_1:5630338-5630357 | Msa1174550:intron | 40.0% | |
| ATCCACAACCGAGAATCATT+TGG | + | chr8_1:5630349-5630368 | None:intergenic | 40.0% | |
| AGAGTATGGAATCTGAAGAG+AGG | - | chr8_1:5630548-5630567 | Msa1174550:intron | 40.0% | |
| GAGTATGGAATCTGAAGAGA+GGG | - | chr8_1:5630549-5630568 | Msa1174550:intron | 40.0% | |
| ACACGCCTTCTTGATTATAC+TGG | - | chr8_1:5630658-5630677 | Msa1174550:intron | 40.0% | |
| TAGCTTCAGACTCATGTTCT+TGG | + | chr8_1:5631052-5631071 | None:intergenic | 40.0% | |
| ! | TCTGTTTCTCTTGCTCAATC+TGG | - | chr8_1:5631254-5631273 | Msa1174550:CDS | 40.0% |
| GTCTGTGTCAGTGTAAGAGA+GGG | + | chr8_1:5625048-5625067 | None:intergenic | 45.0% | |
| TGTCTGTGTCAGTGTAAGAG+AGG | + | chr8_1:5625049-5625068 | None:intergenic | 45.0% | |
| ATACACACGTCTTCGATCAG+AGG | - | chr8_1:5625126-5625145 | Msa1174550:three_prime_UTR | 45.0% | |
| !! | CTCTGAAACCTCGTGTTTGA+TGG | + | chr8_1:5625270-5625289 | None:intergenic | 45.0% |
| TCAAACACGAGGTTTCAGAG+AGG | - | chr8_1:5625270-5625289 | Msa1174550:three_prime_UTR | 45.0% | |
| ACATACGAAACACCGGCAAT+CGG | + | chr8_1:5625351-5625370 | None:intergenic | 45.0% | |
| AGTAGCCACATACGAAACAC+CGG | + | chr8_1:5625358-5625377 | None:intergenic | 45.0% | |
| TGTTTCGTATGTGGCTACTC+CGG | - | chr8_1:5625359-5625378 | Msa1174550:exon | 45.0% | |
| CGAAAGCAACCAAACATGCT+AGG | - | chr8_1:5625843-5625862 | Msa1174550:CDS | 45.0% | |
| ! | GGGGCCAAAATTGATTCTAG+AGG | + | chr8_1:5625881-5625900 | None:intergenic | 45.0% |
| CCTATGTGCACACCATATGT+TGG | + | chr8_1:5625933-5625952 | None:intergenic | 45.0% | |
| CCAACATATGGTGTGCACAT+AGG | - | chr8_1:5625930-5625949 | Msa1174550:CDS | 45.0% | |
| ATTCGAACTGGGTAACGAAG+TGG | - | chr8_1:5626015-5626034 | Msa1174550:CDS | 45.0% | |
| TCAGAAGGACACTCAACCAT+AGG | + | chr8_1:5626133-5626152 | None:intergenic | 45.0% | |
| CGGTTAGAAGTTGCTTAAGC+TGG | - | chr8_1:5626376-5626395 | Msa1174550:CDS | 45.0% | |
| ! | GCCATATAAACATGGTGTCG+CGG | + | chr8_1:5626540-5626559 | None:intergenic | 45.0% |
| !! | AAATGCTCAAGAGTGCCCTT+AGG | - | chr8_1:5626712-5626731 | Msa1174550:CDS | 45.0% |
| ! | TGCCCTTAGGACATTGGTTA+AGG | - | chr8_1:5626725-5626744 | Msa1174550:CDS | 45.0% |
| ! | GCCCTTAGGACATTGGTTAA+GGG | - | chr8_1:5626726-5626745 | Msa1174550:CDS | 45.0% |
| CCCCTTAACCAATGTCCTAA+GGG | + | chr8_1:5626730-5626749 | None:intergenic | 45.0% | |
| ! | CCCTTAGGACATTGGTTAAG+GGG | - | chr8_1:5626727-5626746 | Msa1174550:CDS | 45.0% |
| TCCCCTTAACCAATGTCCTA+AGG | + | chr8_1:5626731-5626750 | None:intergenic | 45.0% | |
| TATGCTAACAAGTGCCCTGA+GGG | + | chr8_1:5626872-5626891 | None:intergenic | 45.0% | |
| TTATGCTAACAAGTGCCCTG+AGG | + | chr8_1:5626873-5626892 | None:intergenic | 45.0% | |
| CAAATTGGCCCTTAAGCTAG+GGG | - | chr8_1:5626901-5626920 | Msa1174550:intron | 45.0% | |
| CAAAAGAAGCCCCTAGCTTA+AGG | + | chr8_1:5626913-5626932 | None:intergenic | 45.0% | |
| CCACTACATCTAAGTCCACA+AGG | + | chr8_1:5627087-5627106 | None:intergenic | 45.0% | |
| CCTTGTGGACTTAGATGTAG+TGG | - | chr8_1:5627084-5627103 | Msa1174550:intron | 45.0% | |
| !! | TGGGCAAGTCTATTTTGGGT+TGG | - | chr8_1:5627289-5627308 | Msa1174550:intron | 45.0% |
| !!! | GCAAGTCTATTTTGGGTTGG+AGG | - | chr8_1:5627292-5627311 | Msa1174550:intron | 45.0% |
| !! | TTTTGCTGTGTTGTCAGTCC+CGG | - | chr8_1:5627384-5627403 | Msa1174550:intron | 45.0% |
| CATAGCAACCCAGAATTGTG+TGG | + | chr8_1:5627627-5627646 | None:intergenic | 45.0% | |
| CACACAATTCTGGGTTGCTA+TGG | - | chr8_1:5627625-5627644 | Msa1174550:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | - | chr8_1:5627774-5627793 | Msa1174550:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | - | chr8_1:5627775-5627794 | Msa1174550:intron | 45.0% | |
| CGACCTCACTTAGTAGGATA+AGG | - | chr8_1:5627933-5627952 | Msa1174550:intron | 45.0% | |
| CACACAAGGGAAACATGAAG+AGG | + | chr8_1:5628118-5628137 | None:intergenic | 45.0% | |
| CTTCATGTTTCCCTTGTGTG+AGG | - | chr8_1:5628118-5628137 | Msa1174550:intron | 45.0% | |
| ATGCACTGCATCAGATCAGT+TGG | + | chr8_1:5629306-5629325 | None:intergenic | 45.0% | |
| ! | CCTGTAGGAAGTACAAAGCA+TGG | + | chr8_1:5629415-5629434 | None:intergenic | 45.0% |
| CCATGCTTTGTACTTCCTAC+AGG | - | chr8_1:5629412-5629431 | Msa1174550:intron | 45.0% | |
| ! | ATAGAACTTGACGGACCTCT+GGG | - | chr8_1:5629464-5629483 | Msa1174550:intron | 45.0% |
| !! | ACAGCATCACTTTTACCCAG+AGG | + | chr8_1:5629482-5629501 | None:intergenic | 45.0% |
| TCCATGCATTCCAGTTCCAA+GGG | + | chr8_1:5629661-5629680 | None:intergenic | 45.0% | |
| CCTTAATTCTTGGTAGGCAC+TGG | + | chr8_1:5629768-5629787 | None:intergenic | 45.0% | |
| CCAGTGCCTACCAAGAATTA+AGG | - | chr8_1:5629765-5629784 | Msa1174550:intron | 45.0% | |
| TCCTTACAGAGTGGAAGACT+TGG | - | chr8_1:5629937-5629956 | Msa1174550:intron | 45.0% | |
| TCCAAGTCTTCCACTCTGTA+AGG | + | chr8_1:5629941-5629960 | None:intergenic | 45.0% | |
| TCGTGAATACTCTATGGGCA+AGG | + | chr8_1:5630015-5630034 | None:intergenic | 45.0% | |
| ! | TGCCCATAGAGTATTCACGA+CGG | - | chr8_1:5630015-5630034 | Msa1174550:intron | 45.0% |
| TATATCAACAGCCCGACGAT+AGG | + | chr8_1:5630221-5630240 | None:intergenic | 45.0% | |
| ACCAAGCACGATAATCACAC+GGG | + | chr8_1:5630246-5630265 | None:intergenic | 45.0% | |
| TTATCGTGCTTGGTATGGAC+TGG | - | chr8_1:5630252-5630271 | Msa1174550:intron | 45.0% | |
| TATCGTGCTTGGTATGGACT+GGG | - | chr8_1:5630253-5630272 | Msa1174550:intron | 45.0% | |
| AGCCAAATGATTCTCGGTTG+TGG | - | chr8_1:5630344-5630363 | Msa1174550:intron | 45.0% | |
| TTCTCGGTTGTGGATAGCTA+TGG | - | chr8_1:5630354-5630373 | Msa1174550:intron | 45.0% | |
| AGTAAAACGCTGCCTCTTCA+GGG | + | chr8_1:5630513-5630532 | None:intergenic | 45.0% | |
| TAGTAAAACGCTGCCTCTTC+AGG | + | chr8_1:5630514-5630533 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+CGG | - | chr8_1:5630553-5630572 | Msa1174550:intron | 45.0% | |
| CTGGGCCAGTATAATCAAGA+AGG | + | chr8_1:5630666-5630685 | None:intergenic | 45.0% | |
| TTGTGCTGCGTCAGAACTAA+TGG | - | chr8_1:5630927-5630946 | Msa1174550:CDS | 45.0% | |
| TCTCTTGCTCAATCTGGTGA+AGG | - | chr8_1:5631260-5631279 | Msa1174550:CDS | 45.0% | |
| !!! | TTAAAATAGAAATTTTATAT+TGG | - | chr8_1:5628714-5628733 | Msa1174550:intron | 5.0% |
| !! | TACAAAATAAATAAATAAAT+CGG | + | chr8_1:5630713-5630732 | None:intergenic | 5.0% |
| ! | CCAACAACAACACCGATTGC+CGG | - | chr8_1:5625336-5625355 | Msa1174550:three_prime_UTR | 50.0% |
| GATTGCCGGTGTTTCGTATG+TGG | - | chr8_1:5625350-5625369 | Msa1174550:three_prime_UTR | 50.0% | |
| GTATGTGGCTACTCCGGTTA+TGG | - | chr8_1:5625365-5625384 | Msa1174550:exon | 50.0% | |
| ATACTAGGGTCTAGCACACG+TGG | - | chr8_1:5626511-5626530 | Msa1174550:CDS | 50.0% | |
| GCCGCGACACCATGTTTATA+TGG | - | chr8_1:5626536-5626555 | Msa1174550:CDS | 50.0% | |
| !! | CAAGAGTGCCCTTAGGACAT+TGG | - | chr8_1:5626719-5626738 | Msa1174550:CDS | 50.0% |
| !!! | AGTGGCGTTTTGGAGAGCTT+AGG | - | chr8_1:5627102-5627121 | Msa1174550:intron | 50.0% |
| ! | GGTGTGTACGTTGTGCTGAT+GGG | - | chr8_1:5627147-5627166 | Msa1174550:intron | 50.0% |
| TTATGTGAAGGTAGCGCCAG+CGG | - | chr8_1:5627220-5627239 | Msa1174550:intron | 50.0% | |
| ! | TCATGTTTCTAACCCTCCGC+TGG | + | chr8_1:5627239-5627258 | None:intergenic | 50.0% |
| AACCCCAAAACTGGGATAGC+AGG | - | chr8_1:5627421-5627440 | Msa1174550:intron | 50.0% | |
| ACCCCAAAACTGGGATAGCA+GGG | - | chr8_1:5627422-5627441 | Msa1174550:intron | 50.0% | |
| ! | ACCCTGCTATCCCAGTTTTG+GGG | + | chr8_1:5627426-5627445 | None:intergenic | 50.0% |
| ! | CACCCTGCTATCCCAGTTTT+GGG | + | chr8_1:5627427-5627446 | None:intergenic | 50.0% |
| ! | ACACCCTGCTATCCCAGTTT+TGG | + | chr8_1:5627428-5627447 | None:intergenic | 50.0% |
| TGGGTTGCTATGGCGAGTTT+GGG | - | chr8_1:5627635-5627654 | Msa1174550:intron | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | - | chr8_1:5627776-5627795 | Msa1174550:intron | 50.0% | |
| GAGGGGAGTCAAATCACTAG+AGG | - | chr8_1:5627793-5627812 | Msa1174550:intron | 50.0% | |
| TGTAGCCGACCTCACTTAGT+AGG | - | chr8_1:5627927-5627946 | Msa1174550:intron | 50.0% | |
| CTGGCTGTTGCCTTCAAAGT+TGG | - | chr8_1:5628371-5628390 | Msa1174550:intron | 50.0% | |
| GCTTTGTACTTCCTACAGGC+CGG | - | chr8_1:5629416-5629435 | Msa1174550:intron | 50.0% | |
| ! | GATAGAACTTGACGGACCTC+TGG | - | chr8_1:5629463-5629482 | Msa1174550:intron | 50.0% |
| TTTGGCACGCACAGTTCTTG+TGG | - | chr8_1:5629619-5629638 | Msa1174550:intron | 50.0% | |
| ACCCTTGGAACTGGAATGCA+TGG | - | chr8_1:5629657-5629676 | Msa1174550:intron | 50.0% | |
| GTCCATGCATTCCAGTTCCA+AGG | + | chr8_1:5629662-5629681 | None:intergenic | 50.0% | |
| GAGGACTGATCCTTACAGAG+TGG | - | chr8_1:5629928-5629947 | Msa1174550:intron | 50.0% | |
| TCTCTCTGCTTGGACACTCA+TGG | - | chr8_1:5630150-5630169 | Msa1174550:intron | 50.0% | |
| CTCTCTGCTTGGACACTCAT+GGG | - | chr8_1:5630151-5630170 | Msa1174550:intron | 50.0% | |
| GAAAAATACTCCTGCCGCTG+TGG | - | chr8_1:5630192-5630211 | Msa1174550:intron | 50.0% | |
| ACCCGTGTGATTATCGTGCT+TGG | - | chr8_1:5630242-5630261 | Msa1174550:intron | 50.0% | |
| CTGAATGCAGCTTCGCTAGT+TGG | + | chr8_1:5630480-5630499 | None:intergenic | 50.0% | |
| AGCAAACCCTCAACCATGTG+AGG | + | chr8_1:5630580-5630599 | None:intergenic | 50.0% | |
| CTGCTGCCCTGCATTAAGGA+AGG | + | chr8_1:5625206-5625225 | None:intergenic | 55.0% | |
| TGCTCTGCTGCCCTGCATTA+AGG | + | chr8_1:5625210-5625229 | None:intergenic | 55.0% | |
| ATGCAGGGCAGCAGAGCAAT+TGG | - | chr8_1:5625212-5625231 | Msa1174550:three_prime_UTR | 55.0% | |
| AGGGCAGCAGAGCAATTGGT+AGG | - | chr8_1:5625216-5625235 | Msa1174550:three_prime_UTR | 55.0% | |
| !! | CCGGCAATCGGTGTTGTTGT+TGG | + | chr8_1:5625339-5625358 | None:intergenic | 55.0% |
| GGCTACTCCGGTTATGGAAG+AGG | - | chr8_1:5625371-5625390 | Msa1174550:exon | 55.0% | |
| GGGTGTGTACGTTGTGCTGA+TGG | - | chr8_1:5627146-5627165 | Msa1174550:intron | 55.0% | |
| AGAGCGGTCAACCCCAAAAC+TGG | - | chr8_1:5627412-5627431 | Msa1174550:intron | 55.0% | |
| GAGCGGTCAACCCCAAAACT+GGG | - | chr8_1:5627413-5627432 | Msa1174550:intron | 55.0% | |
| ACTGGGATAGCAGGGTGTGA+TGG | - | chr8_1:5627430-5627449 | Msa1174550:intron | 55.0% | |
| TCTTGTGAACGCGGCCATGA+CGG | - | chr8_1:5627598-5627617 | Msa1174550:intron | 55.0% | |
| GAATTGTGTGGCGACCGTCA+TGG | + | chr8_1:5627615-5627634 | None:intergenic | 55.0% | |
| TGACGGTCGCCACACAATTC+TGG | - | chr8_1:5627615-5627634 | Msa1174550:intron | 55.0% | |
| GACGGTCGCCACACAATTCT+GGG | - | chr8_1:5627616-5627635 | Msa1174550:intron | 55.0% | |
| CTGGGTTGCTATGGCGAGTT+TGG | - | chr8_1:5627634-5627653 | Msa1174550:intron | 55.0% | |
| GGGTTGCTATGGCGAGTTTG+GGG | - | chr8_1:5627636-5627655 | Msa1174550:intron | 55.0% | |
| GGTTGCTATGGCGAGTTTGG+GGG | - | chr8_1:5627637-5627656 | Msa1174550:intron | 55.0% | |
| ACAACACGCTGCCGCTCTAA+CGG | - | chr8_1:5627667-5627686 | Msa1174550:intron | 55.0% | |
| ! | TGAGCTCTGGCGCATGCTAA+TGG | - | chr8_1:5629275-5629294 | Msa1174550:intron | 55.0% |
| !! | TTCGCTTTTCTCCGGCCTGT+AGG | + | chr8_1:5629430-5629449 | None:intergenic | 55.0% |
| GGCCGGAGAAAAGCGAAAAG+AGG | - | chr8_1:5629433-5629452 | Msa1174550:intron | 55.0% | |
| CCTTATCGAGCATGCGAAGC+TGG | + | chr8_1:5630399-5630418 | None:intergenic | 55.0% | |
| CCAGCTTCGCATGCTCGATA+AGG | - | chr8_1:5630396-5630415 | Msa1174550:intron | 55.0% | |
| GCGAAGCTGCATTCAGAGCT+CGG | - | chr8_1:5630484-5630503 | Msa1174550:intron | 55.0% | |
| GACGGACCTCACATGGTTGA+GGG | - | chr8_1:5630571-5630590 | Msa1174550:intron | 55.0% | |
| ATGCCCTGAACAGTGCCCTC+AGG | - | chr8_1:5626854-5626873 | Msa1174550:intron | 60.0% | |
| TGCCCTGAACAGTGCCCTCA+GGG | - | chr8_1:5626855-5626874 | Msa1174550:intron | 60.0% | |
| !! | TGCCCTGAGGGCACTGTTCA+GGG | + | chr8_1:5626860-5626879 | None:intergenic | 60.0% |
| GTCAGTCCCGGATAGCAGAG+CGG | - | chr8_1:5627396-5627415 | Msa1174550:intron | 60.0% | |
| GGTTGACCGCTCTGCTATCC+GGG | + | chr8_1:5627405-5627424 | None:intergenic | 60.0% | |
| GGGTTGACCGCTCTGCTATC+CGG | + | chr8_1:5627406-5627425 | None:intergenic | 60.0% | |
| TGCTATGGCGAGTTTGGGGG+CGG | - | chr8_1:5627640-5627659 | Msa1174550:intron | 60.0% | |
| GGCAACTAGCGCCGTTAGAG+CGG | + | chr8_1:5627681-5627700 | None:intergenic | 60.0% | |
| CCGACGATAGGCATCCACAG+CGG | + | chr8_1:5630209-5630228 | None:intergenic | 60.0% | |
| CCGCTGTGGATGCCTATCGT+CGG | - | chr8_1:5630206-5630225 | Msa1174550:intron | 60.0% | |
| CGCTGTGGATGCCTATCGTC+GGG | - | chr8_1:5630207-5630226 | Msa1174550:intron | 60.0% | |
| AGAGAGGGACGGACCTCACA+TGG | - | chr8_1:5630564-5630583 | Msa1174550:intron | 60.0% | |
| GGACGGACCTCACATGGTTG+AGG | - | chr8_1:5630570-5630589 | Msa1174550:intron | 60.0% | |
| !! | GTGCCCTGAGGGCACTGTTC+AGG | + | chr8_1:5626861-5626880 | None:intergenic | 65.0% |
| TGTGAAGGTAGCGCCAGCGG+AGG | - | chr8_1:5627223-5627242 | Msa1174550:intron | 65.0% | |
| GTGAAGGTAGCGCCAGCGGA+GGG | - | chr8_1:5627224-5627243 | Msa1174550:intron | 65.0% | |
| CGATAGGCATCCACAGCGGC+AGG | + | chr8_1:5630205-5630224 | None:intergenic | 65.0% | |
| AGAGCTCGGACGCCCTGAAG+AGG | - | chr8_1:5630498-5630517 | Msa1174550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 5624892 | 5631351 | 5624892 | ID=Msa1174550;Name=Msa1174550 |
| chr8_1 | mRNA | 5624892 | 5631351 | 5624892 | ID=Msa1174550-mRNA-1;Parent=Msa1174550;Name=Msa1174550-mRNA-1;_AED=0.03;_eAED=0.03;_QI=30|1|1|1|1|1|4|482|577 |
| chr8_1 | exon | 5624892 | 5625457 | 5624892 | ID=Msa1174550-mRNA-1:exon:1876;Parent=Msa1174550-mRNA-1 |
| chr8_1 | exon | 5625559 | 5626809 | 5625559 | ID=Msa1174550-mRNA-1:exon:1875;Parent=Msa1174550-mRNA-1 |
| chr8_1 | exon | 5630713 | 5631025 | 5630713 | ID=Msa1174550-mRNA-1:exon:1874;Parent=Msa1174550-mRNA-1 |
| chr8_1 | exon | 5631236 | 5631351 | 5631236 | ID=Msa1174550-mRNA-1:exon:1873;Parent=Msa1174550-mRNA-1 |
| chr8_1 | five_prime_UTR | 5631322 | 5631351 | 5631322 | ID=Msa1174550-mRNA-1:five_prime_utr;Parent=Msa1174550-mRNA-1 |
| chr8_1 | CDS | 5631236 | 5631321 | 5631236 | ID=Msa1174550-mRNA-1:cds;Parent=Msa1174550-mRNA-1 |
| chr8_1 | CDS | 5630713 | 5631025 | 5630713 | ID=Msa1174550-mRNA-1:cds;Parent=Msa1174550-mRNA-1 |
| chr8_1 | CDS | 5625559 | 5626809 | 5625559 | ID=Msa1174550-mRNA-1:cds;Parent=Msa1174550-mRNA-1 |
| chr8_1 | CDS | 5625374 | 5625457 | 5625374 | ID=Msa1174550-mRNA-1:cds;Parent=Msa1174550-mRNA-1 |
| chr8_1 | three_prime_UTR | 5624892 | 5625373 | 5624892 | ID=Msa1174550-mRNA-1:three_prime_utr;Parent=Msa1174550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
