Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276720 | sp|Q9STS3|CDC23_ARATH | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276720 | G7L7L4 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1235240 | Msa1276720 | 0.826351 | 2.844785e-54 | -8.615850e-47 |
| Msa1276720 | Msa1443910 | 0.969048 | 1.491636e-129 | -8.615850e-47 |
| Msa1276720 | Msa1443930 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
| Msa1174530 | Msa1276720 | 0.800545 | 1.370739e-48 | -8.615850e-47 |
| Msa1174550 | Msa1276720 | 0.987795 | 1.453971e-171 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276720 | MtrunA17_Chr8g0344341 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| Msa1276720 | MtrunA17_Chr1g0205411 | 86.528 | 579 | 73 | 4 | 1 | 576 | 1 | 577 | 0.0 | 1045 |
| Msa1276720 | MtrunA17_Chr8g0356451 | 75.862 | 87 | 21 | 0 | 419 | 505 | 1 | 87 | 7.96e-42 | 145 |
| Msa1276720 | MtrunA17_Chr6g0456451 | 28.159 | 277 | 190 | 2 | 270 | 546 | 460 | 727 | 7.71e-29 | 121 |
| Msa1276720 | MtrunA17_Chr7g0221321 | 27.055 | 292 | 203 | 3 | 255 | 546 | 444 | 725 | 2.85e-26 | 114 |
| Msa1276720 | MtrunA17_Chr8g0356461 | 77.778 | 63 | 11 | 2 | 517 | 576 | 1 | 63 | 4.60e-25 | 98.2 |
| Msa1276720 | MtrunA17_Chr2g0286231 | 25.543 | 184 | 135 | 2 | 234 | 417 | 211 | 392 | 5.00e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276720 | AT3G48150.1 | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| Msa1276720 | AT3G48150.2 | 73.978 | 465 | 119 | 1 | 114 | 576 | 1 | 465 | 0.0 | 750 |
| Msa1276720 | AT2G20000.1 | 27.243 | 301 | 210 | 2 | 255 | 555 | 434 | 725 | 2.68e-27 | 117 |
| Msa1276720 | AT3G16320.2 | 31.441 | 229 | 150 | 3 | 242 | 463 | 390 | 618 | 5.06e-27 | 116 |
| Msa1276720 | AT3G16320.1 | 31.441 | 229 | 150 | 3 | 242 | 463 | 401 | 629 | 5.51e-27 | 116 |
| Msa1276720 | AT2G20000.2 | 29.907 | 214 | 150 | 0 | 255 | 468 | 434 | 647 | 9.89e-27 | 115 |
| Msa1276720 | AT3G16320.4 | 31.944 | 144 | 96 | 1 | 242 | 383 | 401 | 544 | 2.15e-16 | 82.8 |
| Msa1276720 | AT3G16320.3 | 31.944 | 144 | 96 | 1 | 242 | 383 | 390 | 533 | 2.40e-16 | 82.8 |
Find 123 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | 8_3:-11495609 | Msa1276720:CDS |
| CTATGATGACTAAACATATT+AGG | 0.175859 | 8_3:-11494565 | Msa1276720:three_prime_UTR |
| AAGATCTTATGCTCTTTATT+TGG | 0.192432 | 8_3:-11500165 | Msa1276720:intron |
| GGGAATTATTACAGTTTAAA+AGG | 0.197539 | 8_3:-11495588 | Msa1276720:CDS |
| TAGTAAAACGCTGCCTCTTC+AGG | 0.213627 | 8_3:+11495147 | None:intergenic |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | 8_3:-11495608 | Msa1276720:CDS |
| CATTATGCATCCTTAATTCT+TGG | 0.262649 | 8_3:+11495883 | None:intergenic |
| TAGCTTCAGACTCATGTTCT+TGG | 0.268310 | 8_3:+11494607 | None:intergenic |
| GAATATCTACTCGGAACTTT+TGG | 0.287414 | 8_3:-11495843 | Msa1276720:CDS |
| CATGTTCTTCGTGATCAAAT+TGG | 0.290724 | 8_3:-11500206 | Msa1276720:CDS |
| TATCCGTCGTGAATACTCTA+TGG | 0.295435 | 8_3:+11495640 | None:intergenic |
| TCTGTTTCTCTTGCTCAATC+TGG | 0.299366 | 8_3:-11494402 | Msa1276720:three_prime_UTR |
| AGTGCTTCATTAGAGAAATT+AGG | 0.308119 | 8_3:+11494791 | None:intergenic |
| GTATGTGGCTACTCCGGTTA+TGG | 0.336064 | 8_3:-11500309 | Msa1276720:CDS |
| CTCTGAAACCTCGTGTTTGA+TGG | 0.342510 | 8_3:+11500407 | None:intergenic |
| TATGATGACTAAACATATTA+GGG | 0.343475 | 8_3:-11494564 | Msa1276720:three_prime_UTR |
| AGCAAGAGAAACAGAAAATC+AGG | 0.349057 | 8_3:+11494410 | None:intergenic |
| TTTGATGGAGTAAACTTAGA+TGG | 0.360770 | 8_3:+11500422 | None:intergenic |
| ATTTAAAATAGTTGTAGAAT+AGG | 0.360938 | 8_3:-11494475 | Msa1276720:three_prime_UTR |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | 8_3:+11495609 | None:intergenic |
| GTCATCATAGAAGAGAATAA+AGG | 0.369455 | 8_3:+11494578 | None:intergenic |
| TGGAAACCAGATTACTACTT+TGG | 0.377991 | 8_3:+11494627 | None:intergenic |
| TCTTGCAGCCAAATGATTCT+CGG | 0.391224 | 8_3:-11495320 | Msa1276720:CDS |
| ACACGCCTTCTTGATTATAC+TGG | 0.393914 | 8_3:-11495000 | Msa1276720:CDS |
| TTGTGCTGCGTCAGAACTAA+TGG | 0.399708 | 8_3:-11494729 | Msa1276720:three_prime_UTR |
| GATAGAACTTGACGGACCTC+TGG | 0.399973 | 8_3:-11496195 | Msa1276720:CDS |
| CCAGTGCCTACCAAGAATTA+AGG | 0.405369 | 8_3:-11495893 | Msa1276720:CDS |
| ATGTTCTTCGTGATCAAATT+GGG | 0.413042 | 8_3:-11500205 | Msa1276720:CDS |
| AATTCATCCTCTTCCATAAC+CGG | 0.419596 | 8_3:+11500296 | None:intergenic |
| GGGTTTGAATAGATTGTCAT+TGG | 0.421580 | 8_3:+11494432 | None:intergenic |
| GTAAGTCCAAAGTAGTAATC+TGG | 0.428030 | 8_3:-11494633 | Msa1276720:three_prime_UTR |
| TCTCTCTGCTTGGACACTCA+TGG | 0.430654 | 8_3:-11495508 | Msa1276720:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | 8_3:-11496171 | Msa1276720:CDS |
| TGATCAAATTGGGAGGAAAT+CGG | 0.441059 | 8_3:-11500195 | Msa1276720:CDS |
| GTCTTAATCTCAATAGTCAT+TGG | 0.443586 | 8_3:-11495935 | Msa1276720:CDS |
| GCTATCAACTGTAGTGCATA+AGG | 0.444872 | 8_3:+11495965 | None:intergenic |
| CCGGCAATCGGTGTTGTTGT+TGG | 0.446248 | 8_3:+11500338 | None:intergenic |
| CCAACAACAACACCGATTGC+CGG | 0.446537 | 8_3:-11500338 | Msa1276720:CDS |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | 8_3:-11496010 | Msa1276720:CDS |
| CAAATTCTCTCAAACTGTAC+TGG | 0.449897 | 8_3:+11495784 | None:intergenic |
| GTCTCTATTCCTCTTCCAAA+TGG | 0.454376 | 8_3:-11500688 | Msa1276720:intron |
| GAAGAGGATGAATTTGTTGA+TGG | 0.454661 | 8_3:-11500287 | Msa1276720:CDS |
| ATGCAGGGCAGCAGAGCAAT+TGG | 0.455938 | 8_3:-11500462 | Msa1276720:intron |
| CCAGCTTCGCATGCTCGATA+AGG | 0.459121 | 8_3:-11495262 | Msa1276720:CDS |
| AGGAATTCGTTTCATTAGAG+AGG | 0.459664 | 8_3:-11496151 | Msa1276720:CDS |
| ATCCACAACCGAGAATCATT+TGG | 0.460057 | 8_3:+11495312 | None:intergenic |
| CTGAATGCAGCTTCGCTAGT+TGG | 0.462339 | 8_3:+11495181 | None:intergenic |
| CTCTCTGCTTGGACACTCAT+GGG | 0.470449 | 8_3:-11495507 | Msa1276720:CDS |
| GATTGCCGGTGTTTCGTATG+TGG | 0.471511 | 8_3:-11500324 | Msa1276720:CDS |
| TCCAAGTCTTCCACTCTGTA+AGG | 0.474410 | 8_3:+11495720 | None:intergenic |
| CCTTATCGAGCATGCGAAGC+TGG | 0.477242 | 8_3:+11495262 | None:intergenic |
| TTGGCGTAATCTCATGTGTT+CGG | 0.485540 | 8_3:+11500357 | None:intergenic |
| CCTTAATTCTTGGTAGGCAC+TGG | 0.488674 | 8_3:+11495893 | None:intergenic |
| GAGTATGGAATCTGAAGAGA+GGG | 0.490455 | 8_3:-11495109 | Msa1276720:CDS |
| TAATTTCTCTAATGAAGCAC+TGG | 0.490963 | 8_3:-11494789 | Msa1276720:three_prime_UTR |
| ACAGAAAGGCAATGATACTT+TGG | 0.492080 | 8_3:-11496057 | Msa1276720:CDS |
| GGCTACTCCGGTTATGGAAG+AGG | 0.498305 | 8_3:-11500303 | Msa1276720:CDS |
| CCATATAAGTACAAAAGAAA+AGG | 0.501668 | 8_3:+11496092 | None:intergenic |
| TCCTTACAGAGTGGAAGACT+TGG | 0.506974 | 8_3:-11495721 | Msa1276720:CDS |
| TCTCTTGCTCAATCTGGTGA+AGG | 0.511345 | 8_3:-11494396 | Msa1276720:three_prime_UTR |
| CGCTGTGGATGCCTATCGTC+GGG | 0.517609 | 8_3:-11495451 | Msa1276720:CDS |
| GACGGACCTCACATGGTTGA+GGG | 0.518538 | 8_3:-11495087 | Msa1276720:CDS |
| TTTGGCACGCACAGTTCTTG+TGG | 0.519291 | 8_3:-11496039 | Msa1276720:CDS |
| TGTGATTATCGTGCTTGGTA+TGG | 0.521126 | 8_3:-11495411 | Msa1276720:CDS |
| CCGCTGTGGATGCCTATCGT+CGG | 0.525627 | 8_3:-11495452 | Msa1276720:CDS |
| GCGAAGCTGCATTCAGAGCT+CGG | 0.527303 | 8_3:-11495174 | Msa1276720:CDS |
| CGATAGGCATCCACAGCGGC+AGG | 0.530461 | 8_3:+11495456 | None:intergenic |
| ACATACGAAACACCGGCAAT+CGG | 0.530765 | 8_3:+11500326 | None:intergenic |
| CTCCAATGTTCTCTATGCTA+AGG | 0.531177 | 8_3:-11495691 | Msa1276720:CDS |
| AGGCAATAAAATGTTACAGA+AGG | 0.533908 | 8_3:-11495242 | Msa1276720:CDS |
| ACCCTTGGAACTGGAATGCA+TGG | 0.534200 | 8_3:-11496001 | Msa1276720:CDS |
| ATGCATCCTTAATTCTTGGT+AGG | 0.534236 | 8_3:+11495887 | None:intergenic |
| AGCCAAATGATTCTCGGTTG+TGG | 0.535639 | 8_3:-11495314 | Msa1276720:CDS |
| GGACGGACCTCACATGGTTG+AGG | 0.535859 | 8_3:-11495088 | Msa1276720:CDS |
| GTCCATGCATTCCAGTTCCA+AGG | 0.536564 | 8_3:+11495999 | None:intergenic |
| GGAATTCGTTTCATTAGAGA+GGG | 0.537497 | 8_3:-11496150 | Msa1276720:CDS |
| ACCCGTGTGATTATCGTGCT+TGG | 0.539237 | 8_3:-11495416 | Msa1276720:CDS |
| AGTAAGTTACCATTTGGAAG+AGG | 0.540515 | 8_3:+11500679 | None:intergenic |
| TTATCGTGCTTGGTATGGAC+TGG | 0.541413 | 8_3:-11495406 | Msa1276720:CDS |
| AGTAAAACGCTGCCTCTTCA+GGG | 0.544822 | 8_3:+11495148 | None:intergenic |
| TTCTCGGTTGTGGATAGCTA+TGG | 0.550619 | 8_3:-11495304 | Msa1276720:CDS |
| TCTCAATAGTCATTGGATGA+AGG | 0.551481 | 8_3:-11495928 | Msa1276720:CDS |
| AAGTAATGAAGTGAATAGAA+AGG | 0.552141 | 8_3:+11495357 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | 8_3:-11496016 | Msa1276720:CDS |
| GGCAATAAAATGTTACAGAA+GGG | 0.556837 | 8_3:-11495241 | Msa1276720:CDS |
| ATAGAACTTGACGGACCTCT+GGG | 0.563134 | 8_3:-11496194 | Msa1276720:CDS |
| ATCCGTCGTGAATACTCTAT+GGG | 0.563752 | 8_3:+11495641 | None:intergenic |
| TTCCTTAGCATAGAGAACAT+TGG | 0.567573 | 8_3:+11495689 | None:intergenic |
| GGCCGGAGAAAAGCGAAAAG+AGG | 0.569695 | 8_3:-11496225 | Msa1276720:CDS |
| AGAGCTCGGACGCCCTGAAG+AGG | 0.573981 | 8_3:-11495160 | Msa1276720:CDS |
| GAAGAGTTGATAGAACTTGA+CGG | 0.586173 | 8_3:-11496203 | Msa1276720:CDS |
| TATATCAACAGCCCGACGAT+AGG | 0.587440 | 8_3:+11495440 | None:intergenic |
| TGTTTCGTATGTGGCTACTC+CGG | 0.589698 | 8_3:-11500315 | Msa1276720:CDS |
| GCAAGAGAAACAGAAAATCA+GGG | 0.598014 | 8_3:+11494411 | None:intergenic |
| GGTCTCATACTGAAACAGAA+AGG | 0.599721 | 8_3:-11496071 | Msa1276720:CDS |
| TCCATGCATTCCAGTTCCAA+GGG | 0.603030 | 8_3:+11496000 | None:intergenic |
| CTGGGCCAGTATAATCAAGA+AGG | 0.603911 | 8_3:+11494995 | None:intergenic |
| TATCGTGCTTGGTATGGACT+GGG | 0.604702 | 8_3:-11495405 | Msa1276720:CDS |
| AGTAGAATCAAATACAAGGT+GGG | 0.608330 | 8_3:+11494370 | None:intergenic |
| AGAGAGGGACGGACCTCACA+TGG | 0.611477 | 8_3:-11495094 | Msa1276720:CDS |
| CTATATTTGAAGATCTGTTG+AGG | 0.612589 | 8_3:-11495749 | Msa1276720:CDS |
| AGAGTATGGAATCTGAAGAG+AGG | 0.616817 | 8_3:-11495110 | Msa1276720:CDS |
| CTTCATTAGAGAAATTAGGA+AGG | 0.619845 | 8_3:+11494795 | None:intergenic |
| AGCAAACCCTCAACCATGTG+AGG | 0.622036 | 8_3:+11495081 | None:intergenic |
| TCGAAATATGAATATCTACT+CGG | 0.623030 | 8_3:-11495852 | Msa1276720:CDS |
| AAAGTTTACTAAGAGGGATG+CGG | 0.625884 | 8_3:-11494854 | Msa1276720:CDS |
| TCGTGAATACTCTATGGGCA+AGG | 0.631954 | 8_3:+11495646 | None:intergenic |
| CAATGTAAAAGGGATACGAT+AGG | 0.634646 | 8_3:-11494524 | Msa1276720:three_prime_UTR |
| AGGGCAGCAGAGCAATTGGT+AGG | 0.639451 | 8_3:-11500458 | Msa1276720:CDS |
| TAGAAGTAGAATCAAATACA+AGG | 0.640501 | 8_3:+11494366 | None:intergenic |
| CAGGGAGTAGGTAACATCGT+TGG | 0.640993 | 8_3:-11500785 | Msa1276720:five_prime_UTR |
| TACCAAGCACGATAATCACA+CGG | 0.642802 | 8_3:+11495414 | None:intergenic |
| TTCTTCGTGATCAAATTGGG+AGG | 0.645388 | 8_3:-11500202 | Msa1276720:CDS |
| ATGGAATCTGAAGAGAGGGA+CGG | 0.663753 | 8_3:-11495105 | Msa1276720:CDS |
| AAGTAGAATCAAATACAAGG+TGG | 0.668154 | 8_3:+11494369 | None:intergenic |
| CAAGAGAAACAGAAAATCAG+GGG | 0.674338 | 8_3:+11494412 | None:intergenic |
| AGTTTACTCCATCAAACACG+AGG | 0.685167 | 8_3:-11500415 | Msa1276720:CDS |
| AGTAGCCACATACGAAACAC+CGG | 0.691312 | 8_3:+11500319 | None:intergenic |
| ACCAAGCACGATAATCACAC+GGG | 0.697673 | 8_3:+11495415 | None:intergenic |
| GAGGACTGATCCTTACAGAG+TGG | 0.728386 | 8_3:-11495730 | Msa1276720:CDS |
| TGCCCATAGAGTATTCACGA+CGG | 0.777322 | 8_3:-11495643 | Msa1276720:CDS |
| CCGACGATAGGCATCCACAG+CGG | 0.791397 | 8_3:+11495452 | None:intergenic |
| TCAAACACGAGGTTTCAGAG+AGG | 0.797609 | 8_3:-11500404 | Msa1276720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAAATAAATAAAT+CGG | + | chr8_3:11500166-11500185 | None:intergenic | 0.0% |
| !! | TAAAAATAGAAATATTGTAT+TGG | - | chr8_3:11496204-11496223 | Msa1276720:CDS | 10.0% |
| !! | ATTGTTTATATATAAACAAA+CGG | - | chr8_3:11496437-11496456 | Msa1276720:intron | 10.0% |
| !!! | AAAAATCAGTTATATATTTT+AGG | - | chr8_3:11499552-11499571 | Msa1276720:intron | 10.0% |
| !!! | ATAAGCTTTTATAATTACTT+AGG | + | chr8_3:11496079-11496098 | None:intergenic | 15.0% |
| !!! | AGCTTATTTTGAAAATATTA+AGG | - | chr8_3:11496092-11496111 | Msa1276720:CDS | 15.0% |
| !!! | AACTTGCATATAAATTTTTT+GGG | + | chr8_3:11498307-11498326 | None:intergenic | 15.0% |
| !! | TTTATTTAAATGTTACTCAA+GGG | + | chr8_3:11498696-11498715 | None:intergenic | 15.0% |
| !! | ATTTATTTAAATGTTACTCA+AGG | + | chr8_3:11498697-11498716 | None:intergenic | 15.0% |
| !!! | ATAATTTTTGTTCAGTTTAA+GGG | + | chr8_3:11499582-11499601 | None:intergenic | 15.0% |
| !!! | ACTATTTTAAATCAAAAACA+TGG | + | chr8_3:11500626-11500645 | None:intergenic | 15.0% |
| !!! | ATTTAAAATAGTTGTAGAAT+AGG | - | chr8_3:11500634-11500653 | Msa1276720:intron | 15.0% |
| !! | AACATAAACATAGCAAAATA+GGG | + | chr8_3:11494996-11495015 | None:intergenic | 20.0% |
| !! | AAACATAAACATAGCAAAAT+AGG | + | chr8_3:11494997-11495016 | None:intergenic | 20.0% |
| !!! | AAGAATTGATTTTGAATTGT+AGG | - | chr8_3:11495135-11495154 | Msa1276720:CDS | 20.0% |
| !! | CTGTATATATGATAATAGAT+TGG | + | chr8_3:11495495-11495514 | None:intergenic | 20.0% |
| !!! | CTATCTGATTTTTAAAAGAA+TGG | + | chr8_3:11495764-11495783 | None:intergenic | 20.0% |
| !!! | ATTCGTTTAAGATTAAACAA+AGG | - | chr8_3:11496141-11496160 | Msa1276720:CDS | 20.0% |
| !!! | TTCGTTTAAGATTAAACAAA+GGG | - | chr8_3:11496142-11496161 | Msa1276720:CDS | 20.0% |
| !! | ACAAAAAGTCTTAATACATT+TGG | + | chr8_3:11496508-11496527 | None:intergenic | 20.0% |
| !!! | AGAGTTTGATTTTTTATATC+TGG | - | chr8_3:11496578-11496597 | Msa1276720:intron | 20.0% |
| !!! | GAGTTTGATTTTTTATATCT+GGG | - | chr8_3:11496579-11496598 | Msa1276720:intron | 20.0% |
| !!! | TGTGTTAAATTCAATTTTTG+TGG | - | chr8_3:11496722-11496741 | Msa1276720:intron | 20.0% |
| !!! | GTGTTAAATTCAATTTTTGT+GGG | - | chr8_3:11496723-11496742 | Msa1276720:intron | 20.0% |
| !!! | GGCTGTAATTTTATATATTT+AGG | - | chr8_3:11496904-11496923 | Msa1276720:intron | 20.0% |
| !! | TTAAATCTGATAATTTCTGT+TGG | - | chr8_3:11497719-11497738 | Msa1276720:intron | 20.0% |
| !! | AACACTAAAAATTAAAACAC+TGG | - | chr8_3:11497804-11497823 | Msa1276720:intron | 20.0% |
| !!! | AACTATTTCTTACTTATACA+AGG | + | chr8_3:11498068-11498087 | None:intergenic | 20.0% |
| !! | AATGACGAGATTAAAAAATA+TGG | - | chr8_3:11498104-11498123 | Msa1276720:intron | 20.0% |
| !!! | TAATAGTAGTAACTTTTTCT+TGG | + | chr8_3:11498245-11498264 | None:intergenic | 20.0% |
| !! | AGAAAACATTCTCTTAAAAA+GGG | + | chr8_3:11498537-11498556 | None:intergenic | 20.0% |
| !! | TTATTTAAATGTTACTCAAG+GGG | + | chr8_3:11498695-11498714 | None:intergenic | 20.0% |
| !!! | GATAATTTTTGTTCAGTTTA+AGG | + | chr8_3:11499583-11499602 | None:intergenic | 20.0% |
| !!! | TCATATATTTTTTACTCACT+GGG | + | chr8_3:11500135-11500154 | None:intergenic | 20.0% |
| !! | TATGATGACTAAACATATTA+GGG | - | chr8_3:11500545-11500564 | Msa1276720:intron | 20.0% |
| !!! | TGATTTTGTAACAATGTAAA+AGG | - | chr8_3:11500574-11500593 | Msa1276720:intron | 20.0% |
| !!! | GATTTTGTAACAATGTAAAA+GGG | - | chr8_3:11500575-11500594 | Msa1276720:intron | 20.0% |
| ! | AAGATCTTATGCTCTTTATT+TGG | - | chr8_3:11494944-11494963 | Msa1276720:intron | 25.0% |
| ! | CAAACATACACTAAACATTA+TGG | + | chr8_3:11495103-11495122 | None:intergenic | 25.0% |
| ! | CATAATGTTTAGTGTATGTT+TGG | - | chr8_3:11495101-11495120 | Msa1276720:CDS | 25.0% |
| ! | ATAGGATGACAAAATTTATG+TGG | + | chr8_3:11495568-11495587 | None:intergenic | 25.0% |
| !! | ACATAAATTTTGTCATCCTA+TGG | - | chr8_3:11495567-11495586 | Msa1276720:CDS | 25.0% |
| ! | CATTTAAAGAAACAGTAATG+AGG | + | chr8_3:11495617-11495636 | None:intergenic | 25.0% |
| !! | TTTTACCTATATGTTACACT+AGG | - | chr8_3:11495949-11495968 | Msa1276720:CDS | 25.0% |
| ! | TTTACCTATATGTTACACTA+GGG | - | chr8_3:11495950-11495969 | Msa1276720:CDS | 25.0% |
| !! | AGCTTTTATAATTACTTAGG+TGG | + | chr8_3:11496076-11496095 | None:intergenic | 25.0% |
| ! | TATATATAAACAAACGGCTT+TGG | - | chr8_3:11496443-11496462 | Msa1276720:intron | 25.0% |
| ! | ATATATAAACAAACGGCTTT+GGG | - | chr8_3:11496444-11496463 | Msa1276720:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTCCTTG+TGG | - | chr8_3:11496522-11496541 | Msa1276720:intron | 25.0% |
| ! | TTGTAATTTAGTACAACCTT+TGG | - | chr8_3:11496636-11496655 | Msa1276720:intron | 25.0% |
| ! | GCATAATTAATCAGTCTATT+TGG | + | chr8_3:11496788-11496807 | None:intergenic | 25.0% |
| !!! | ATTAATTATGCTGATTCTGT+TGG | - | chr8_3:11496797-11496816 | Msa1276720:intron | 25.0% |
| ! | AAATCCTATGATGTCAATAA+TGG | + | chr8_3:11497155-11497174 | None:intergenic | 25.0% |
| !! | TATTGACATCATAGGATTTT+TGG | - | chr8_3:11497156-11497175 | Msa1276720:intron | 25.0% |
| ! | ATCATGTGAATTATGTAGTA+AGG | - | chr8_3:11497207-11497226 | Msa1276720:intron | 25.0% |
| ! | AAACTATACGAGAAACTATT+AGG | - | chr8_3:11497285-11497304 | Msa1276720:intron | 25.0% |
| ! | ACAGAACATATAACAACATT+AGG | - | chr8_3:11497474-11497493 | Msa1276720:intron | 25.0% |
| !! | AATTACTGATTAGAGAGATA+AGG | - | chr8_3:11497760-11497779 | Msa1276720:intron | 25.0% |
| !!! | TACTATCCCAGTTTTATTTA+CGG | + | chr8_3:11498009-11498028 | None:intergenic | 25.0% |
| !!! | AATCTCGTCATTTTTTTTTC+TGG | + | chr8_3:11498096-11498115 | None:intergenic | 25.0% |
| ! | GTGCAAAAATAACTAAAAAG+AGG | + | chr8_3:11498341-11498360 | None:intergenic | 25.0% |
| ! | GAAAAATCTGAAGATTGTTT+GGG | + | chr8_3:11498487-11498506 | None:intergenic | 25.0% |
| ! | AGAAAAATCTGAAGATTGTT+TGG | + | chr8_3:11498488-11498507 | None:intergenic | 25.0% |
| ! | CAGAAAACATTCTCTTAAAA+AGG | + | chr8_3:11498538-11498557 | None:intergenic | 25.0% |
| ! | TTAACAAAAGTAAGCATAAG+TGG | + | chr8_3:11498561-11498580 | None:intergenic | 25.0% |
| ! | TATATAGCATGATTAAGACT+GGG | + | chr8_3:11498586-11498605 | None:intergenic | 25.0% |
| ! | TTATATAGCATGATTAAGAC+TGG | + | chr8_3:11498587-11498606 | None:intergenic | 25.0% |
| ! | CCATATAAGTACAAAAGAAA+AGG | + | chr8_3:11499020-11499039 | None:intergenic | 25.0% |
| !! | CCTTTTCTTTTGTACTTATA+TGG | - | chr8_3:11499017-11499036 | Msa1276720:intron | 25.0% |
| ! | TCGAAATATGAATATCTACT+CGG | - | chr8_3:11499257-11499276 | Msa1276720:intron | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | - | chr8_3:11499501-11499520 | Msa1276720:intron | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+AGG | - | chr8_3:11499521-11499540 | Msa1276720:intron | 25.0% |
| ! | AAGTAATGAAGTGAATAGAA+AGG | + | chr8_3:11499755-11499774 | None:intergenic | 25.0% |
| !!! | GTCATATATTTTTTACTCAC+TGG | + | chr8_3:11500136-11500155 | None:intergenic | 25.0% |
| ! | TCATACTAAATCATTCTTTC+AGG | - | chr8_3:11500217-11500236 | Msa1276720:CDS | 25.0% |
| ! | CTATGATGACTAAACATATT+AGG | - | chr8_3:11500544-11500563 | Msa1276720:intron | 25.0% |
| ! | TAGAAGTAGAATCAAATACA+AGG | + | chr8_3:11500746-11500765 | None:intergenic | 25.0% |
| AGTTAGAGTAAGTTACCATT+TGG | + | chr8_3:11494439-11494458 | None:intergenic | 30.0% | |
| GAAGGAGAATGAAAATGAAA+TGG | + | chr8_3:11494623-11494642 | None:intergenic | 30.0% | |
| TTTGATGGAGTAAACTTAGA+TGG | + | chr8_3:11494690-11494709 | None:intergenic | 30.0% | |
| !! | TGATGGTGATTTTTATCTGT+TGG | - | chr8_3:11494839-11494858 | Msa1276720:CDS | 30.0% |
| ATGTTCTTCGTGATCAAATT+GGG | - | chr8_3:11494904-11494923 | Msa1276720:intron | 30.0% | |
| ! | TAGGTAAAGTGATTTGTGTT+TGG | - | chr8_3:11495154-11495173 | Msa1276720:CDS | 30.0% |
| ! | AGGTAAAGTGATTTGTGTTT+GGG | - | chr8_3:11495155-11495174 | Msa1276720:CDS | 30.0% |
| TCCTAAAGTAGAAACAATTC+CGG | - | chr8_3:11495254-11495273 | Msa1276720:CDS | 30.0% | |
| !! | AGTAGAATTGATTTTGTCTC+CGG | + | chr8_3:11495276-11495295 | None:intergenic | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | - | chr8_3:11495327-11495346 | Msa1276720:CDS | 30.0% |
| !! | ATGTTGGCTTAGTATATGTT+TGG | + | chr8_3:11495370-11495389 | None:intergenic | 30.0% |
| ACATATACTAAGCCAACATA+TGG | - | chr8_3:11495371-11495390 | Msa1276720:CDS | 30.0% | |
| ! | GGACAAATTTTACACATGAT+TGG | - | chr8_3:11495404-11495423 | Msa1276720:CDS | 30.0% |
| !! | TTTTGGCTGATTTAAATGCA+TGG | + | chr8_3:11495795-11495814 | None:intergenic | 30.0% |
| TGCATTTAAATCAGCCAAAA+TGG | - | chr8_3:11495795-11495814 | Msa1276720:CDS | 30.0% | |
| !!! | CAGCCAAAATGGTTTTAAAT+AGG | - | chr8_3:11495806-11495825 | Msa1276720:CDS | 30.0% |
| !!! | CCAAAATGGTTTTAAATAGG+CGG | - | chr8_3:11495809-11495828 | Msa1276720:CDS | 30.0% |
| CAAAATCTGCCATATAAACA+TGG | + | chr8_3:11496001-11496020 | None:intergenic | 30.0% | |
| ! | CATGTTTATATGGCAGATTT+TGG | - | chr8_3:11495999-11496018 | Msa1276720:CDS | 30.0% |
| TATTGGATAGCAGAATATCA+TGG | + | chr8_3:11496029-11496048 | None:intergenic | 30.0% | |
| GACATCAGTGTTATCAATAT+TGG | + | chr8_3:11496046-11496065 | None:intergenic | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | + | chr8_3:11496284-11496303 | None:intergenic | 30.0% | |
| AGCATAACCCTTAAACAAAT+TGG | - | chr8_3:11496339-11496358 | Msa1276720:intron | 30.0% | |
| ! | TTAAGGGCCAATTTGTTTAA+GGG | + | chr8_3:11496349-11496368 | None:intergenic | 30.0% |
| ! | TGGGTTTTCATATTAATCAG+TGG | - | chr8_3:11496463-11496482 | Msa1276720:intron | 30.0% |
| ! | GGGTTTTCATATTAATCAGT+GGG | - | chr8_3:11496464-11496483 | Msa1276720:intron | 30.0% |
| !!! | AAGAGCATTTCTTGTTTTTG+TGG | + | chr8_3:11497035-11497054 | None:intergenic | 30.0% |
| ! | GTTTCTCGTATAGTTTTTCT+AGG | + | chr8_3:11497281-11497300 | None:intergenic | 30.0% |
| TATACGAGAAACTATTAGGA+AGG | - | chr8_3:11497289-11497308 | Msa1276720:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr8_3:11497342-11497361 | Msa1276720:intron | 30.0% |
| ATGTCCTATAATTGTTGAAG+TGG | - | chr8_3:11497435-11497454 | Msa1276720:intron | 30.0% | |
| TGTCCTATAATTGTTGAAGT+GGG | - | chr8_3:11497436-11497455 | Msa1276720:intron | 30.0% | |
| AACATTAGGCAAGAATATAG+AGG | - | chr8_3:11497488-11497507 | Msa1276720:intron | 30.0% | |
| ACATTAGGCAAGAATATAGA+GGG | - | chr8_3:11497489-11497508 | Msa1276720:intron | 30.0% | |
| !! | CTGATTATAATTTTGATCCC+AGG | + | chr8_3:11497690-11497709 | None:intergenic | 30.0% |
| GTATTACTTACACAACTTCA+CGG | + | chr8_3:11497905-11497924 | None:intergenic | 30.0% | |
| TATTTACGGAAGACATTGTT+GGG | + | chr8_3:11497995-11498014 | None:intergenic | 30.0% | |
| TTATTTACGGAAGACATTGT+TGG | + | chr8_3:11497996-11498015 | None:intergenic | 30.0% | |
| ATGTCTTCCGTAAATAAAAC+TGG | - | chr8_3:11497999-11498018 | Msa1276720:intron | 30.0% | |
| TGTCTTCCGTAAATAAAACT+GGG | - | chr8_3:11498000-11498019 | Msa1276720:intron | 30.0% | |
| GTAAATAAAACTGGGATAGT+AGG | - | chr8_3:11498008-11498027 | Msa1276720:intron | 30.0% | |
| ! | GCAATTTTTCTACTGCAAAA+AGG | + | chr8_3:11498368-11498387 | None:intergenic | 30.0% |
| AAATATAATGCATTGAGCTC+TGG | - | chr8_3:11498713-11498732 | Msa1276720:intron | 30.0% | |
| GTCTTAATCTCAATAGTCAT+TGG | - | chr8_3:11499174-11499193 | Msa1276720:intron | 30.0% | |
| CATTATGCATCCTTAATTCT+TGG | + | chr8_3:11499229-11499248 | None:intergenic | 30.0% | |
| CTATATTTGAAGATCTGTTG+AGG | - | chr8_3:11499360-11499379 | Msa1276720:intron | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | + | chr8_3:11499503-11499522 | None:intergenic | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | - | chr8_3:11499500-11499519 | Msa1276720:intron | 30.0% |
| ACAAAAATTATCTCTCTGCT+TGG | - | chr8_3:11499591-11499610 | Msa1276720:intron | 30.0% | |
| AGGCAATAAAATGTTACAGA+AGG | - | chr8_3:11499867-11499886 | Msa1276720:intron | 30.0% | |
| GGCAATAAAATGTTACAGAA+GGG | - | chr8_3:11499868-11499887 | Msa1276720:intron | 30.0% | |
| CAAAAAAGAGTTAGAGAGTA+TGG | - | chr8_3:11499985-11500004 | Msa1276720:intron | 30.0% | |
| AAAAAGATTTGAAGAAGCAG+AGG | - | chr8_3:11500078-11500097 | Msa1276720:intron | 30.0% | |
| TAAATCATTCTTTCAGGAGA+GGG | - | chr8_3:11500223-11500242 | Msa1276720:CDS | 30.0% | |
| ACAGCAAAAAGTTTACTAAG+AGG | - | chr8_3:11500248-11500267 | Msa1276720:CDS | 30.0% | |
| CAGCAAAAAGTTTACTAAGA+GGG | - | chr8_3:11500249-11500268 | Msa1276720:CDS | 30.0% | |
| CTTCATTAGAGAAATTAGGA+AGG | + | chr8_3:11500317-11500336 | None:intergenic | 30.0% | |
| AGTGCTTCATTAGAGAAATT+AGG | + | chr8_3:11500321-11500340 | None:intergenic | 30.0% | |
| TAATTTCTCTAATGAAGCAC+TGG | - | chr8_3:11500320-11500339 | Msa1276720:CDS | 30.0% | |
| GTCATCATAGAAGAGAATAA+AGG | + | chr8_3:11500534-11500553 | None:intergenic | 30.0% | |
| AGTAGAATCAAATACAAGGT+GGG | + | chr8_3:11500742-11500761 | None:intergenic | 30.0% | |
| AAGTAGAATCAAATACAAGG+TGG | + | chr8_3:11500743-11500762 | None:intergenic | 30.0% | |
| AGTAAGTTACCATTTGGAAG+AGG | + | chr8_3:11494433-11494452 | None:intergenic | 35.0% | |
| AATTCATCCTCTTCCATAAC+CGG | + | chr8_3:11494816-11494835 | None:intergenic | 35.0% | |
| !! | GAAGAGGATGAATTTGTTGA+TGG | - | chr8_3:11494822-11494841 | Msa1276720:CDS | 35.0% |
| CATGTTCTTCGTGATCAAAT+TGG | - | chr8_3:11494903-11494922 | Msa1276720:intron | 35.0% | |
| TGATCAAATTGGGAGGAAAT+CGG | - | chr8_3:11494914-11494933 | Msa1276720:intron | 35.0% | |
| !! | TACCAACAATGCTTTGAAGT+TGG | - | chr8_3:11495066-11495085 | Msa1276720:CDS | 35.0% |
| !! | TCCGGAATTGTTTCTACTTT+AGG | + | chr8_3:11495258-11495277 | None:intergenic | 35.0% |
| AGAATTGATCCTAGCATGTT+TGG | + | chr8_3:11495308-11495327 | None:intergenic | 35.0% | |
| !! | TGTTTGGTTCCACTTTTAGA+GGG | + | chr8_3:11495354-11495373 | None:intergenic | 35.0% |
| !! | ATGTTTGGTTCCACTTTTAG+AGG | + | chr8_3:11495355-11495374 | None:intergenic | 35.0% |
| !! | CCGCCTATTTAAAACCATTT+TGG | + | chr8_3:11495812-11495831 | None:intergenic | 35.0% |
| ! | TGTCATTGAACTTGTTCATC+AGG | + | chr8_3:11495927-11495946 | None:intergenic | 35.0% |
| TAGACCCTAGTGTAACATAT+AGG | + | chr8_3:11495957-11495976 | None:intergenic | 35.0% | |
| !! | TTTATATGGCAGATTTTGGC+TGG | - | chr8_3:11496003-11496022 | Msa1276720:CDS | 35.0% |
| !! | TAATTACTTAGGTGGACTAC+TGG | + | chr8_3:11496068-11496087 | None:intergenic | 35.0% |
| ! | CGAATGTTCTTGACTTTTGA+AGG | + | chr8_3:11496126-11496145 | None:intergenic | 35.0% |
| CAAAAGTAGTAGGTTTGCAT+TGG | + | chr8_3:11496274-11496293 | None:intergenic | 35.0% | |
| ! | CAATGCAAACCTACTACTTT+TGG | - | chr8_3:11496272-11496291 | Msa1276720:intron | 35.0% |
| ! | CTTAAGGGCCAATTTGTTTA+AGG | + | chr8_3:11496350-11496369 | None:intergenic | 35.0% |
| ! | TTTTGTGGGCAAGTCTATTT+TGG | - | chr8_3:11496737-11496756 | Msa1276720:intron | 35.0% |
| ! | TTTGTGGGCAAGTCTATTTT+GGG | - | chr8_3:11496738-11496757 | Msa1276720:intron | 35.0% |
| !!! | TCTGTTGGATTCCTTTTTTG+CGG | - | chr8_3:11496812-11496831 | Msa1276720:intron | 35.0% |
| GTTGCCATTATTGACATCAT+AGG | - | chr8_3:11497148-11497167 | Msa1276720:intron | 35.0% | |
| AGTCAAATCACTAGAGGTAA+GGG | - | chr8_3:11497251-11497270 | Msa1276720:intron | 35.0% | |
| GGATCTAGAGATAAATGAGT+TGG | - | chr8_3:11497310-11497329 | Msa1276720:intron | 35.0% | |
| ! | AAATGAGTTGGAGAAAGACA+TGG | - | chr8_3:11497322-11497341 | Msa1276720:intron | 35.0% |
| GTCCTATAATTGTTGAAGTG+GGG | - | chr8_3:11497437-11497456 | Msa1276720:intron | 35.0% | |
| AACCCCACTTCAACAATTAT+AGG | + | chr8_3:11497442-11497461 | None:intergenic | 35.0% | |
| ! | ACATTTTACACCTCACACAA+GGG | + | chr8_3:11497583-11497602 | None:intergenic | 35.0% |
| ! | ATGTGTGATGCATTTTGCTA+TGG | - | chr8_3:11497639-11497658 | Msa1276720:intron | 35.0% |
| ! | CATGTCCTTCCTTAATTTGA+AGG | + | chr8_3:11497667-11497686 | None:intergenic | 35.0% |
| AGAAGAAACACCAACTTTGA+AGG | + | chr8_3:11497836-11497855 | None:intergenic | 35.0% | |
| ATTTACGGAAGACATTGTTG+GGG | + | chr8_3:11497994-11498013 | None:intergenic | 35.0% | |
| AAAACTGGGATAGTAGGTAT+TGG | - | chr8_3:11498014-11498033 | Msa1276720:intron | 35.0% | |
| ATAACTAAAAAGAGGCCTCA+TGG | + | chr8_3:11498333-11498352 | None:intergenic | 35.0% | |
| AAACGACTGAGTTTGGTATT+TGG | + | chr8_3:11498420-11498439 | None:intergenic | 35.0% | |
| CAAATAGAAACGACTGAGTT+TGG | + | chr8_3:11498427-11498446 | None:intergenic | 35.0% | |
| TTAAATGTTACTCAAGGGGA+TGG | + | chr8_3:11498691-11498710 | None:intergenic | 35.0% | |
| !! | GAAGAGTTGATAGAACTTGA+CGG | - | chr8_3:11498906-11498925 | Msa1276720:intron | 35.0% |
| TAAAAGTGATGCTGTGAATC+AGG | - | chr8_3:11498938-11498957 | Msa1276720:intron | 35.0% | |
| AGGAATTCGTTTCATTAGAG+AGG | - | chr8_3:11498958-11498977 | Msa1276720:intron | 35.0% | |
| GGAATTCGTTTCATTAGAGA+GGG | - | chr8_3:11498959-11498978 | Msa1276720:intron | 35.0% | |
| ACAGAAAGGCAATGATACTT+TGG | - | chr8_3:11499052-11499071 | Msa1276720:intron | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | - | chr8_3:11499093-11499112 | Msa1276720:intron | 35.0% | |
| TCTCAATAGTCATTGGATGA+AGG | - | chr8_3:11499181-11499200 | Msa1276720:intron | 35.0% | |
| ATGCATCCTTAATTCTTGGT+AGG | + | chr8_3:11499225-11499244 | None:intergenic | 35.0% | |
| ! | GAATATCTACTCGGAACTTT+TGG | - | chr8_3:11499266-11499285 | Msa1276720:intron | 35.0% |
| CAAATTCTCTCAAACTGTAC+TGG | + | chr8_3:11499328-11499347 | None:intergenic | 35.0% | |
| TTCCTTAGCATAGAGAACAT+TGG | + | chr8_3:11499423-11499442 | None:intergenic | 35.0% | |
| CTAAATCATTCTTTCAGGAG+AGG | - | chr8_3:11500222-11500241 | Msa1276720:CDS | 35.0% | |
| AAAGTTTACTAAGAGGGATG+CGG | - | chr8_3:11500255-11500274 | Msa1276720:CDS | 35.0% | |
| ! | CACTGGTGCATTTTACATTT+TGG | - | chr8_3:11500337-11500356 | Msa1276720:CDS | 35.0% |
| GTAAGTCCAAAGTAGTAATC+TGG | - | chr8_3:11500476-11500495 | Msa1276720:intron | 35.0% | |
| TGGAAACCAGATTACTACTT+TGG | + | chr8_3:11500485-11500504 | None:intergenic | 35.0% | |
| CAATGTAAAAGGGATACGAT+AGG | - | chr8_3:11500585-11500604 | Msa1276720:intron | 35.0% | |
| GGGTTTGAATAGATTGTCAT+TGG | + | chr8_3:11500680-11500699 | None:intergenic | 35.0% | |
| CAAGAGAAACAGAAAATCAG+GGG | + | chr8_3:11500700-11500719 | None:intergenic | 35.0% | |
| GCAAGAGAAACAGAAAATCA+GGG | + | chr8_3:11500701-11500720 | None:intergenic | 35.0% | |
| AGCAAGAGAAACAGAAAATC+AGG | + | chr8_3:11500702-11500721 | None:intergenic | 35.0% | |
| !! | TTCTTCTGCTTTTACAGTTC+TGG | - | chr8_3:11500773-11500792 | Msa1276720:exon | 35.0% |
| GTCTCTATTCCTCTTCCAAA+TGG | - | chr8_3:11494421-11494440 | Msa1276720:three_prime_UTR | 40.0% | |
| TCATTCTCCTTCCTTAATGC+AGG | - | chr8_3:11494631-11494650 | Msa1276720:three_prime_UTR | 40.0% | |
| CATTCTCCTTCCTTAATGCA+GGG | - | chr8_3:11494632-11494651 | Msa1276720:three_prime_UTR | 40.0% | |
| AGTTTACTCCATCAAACACG+AGG | - | chr8_3:11494694-11494713 | Msa1276720:three_prime_UTR | 40.0% | |
| TTGGCGTAATCTCATGTGTT+CGG | + | chr8_3:11494755-11494774 | None:intergenic | 40.0% | |
| TTCTTCGTGATCAAATTGGG+AGG | - | chr8_3:11494907-11494926 | Msa1276720:intron | 40.0% | |
| !! | GTCCAACTTCAAAGCATTGT+TGG | + | chr8_3:11495071-11495090 | None:intergenic | 40.0% |
| !! | AATTTTGGCCCCTCTAAAAG+TGG | - | chr8_3:11495342-11495361 | Msa1276720:CDS | 40.0% |
| !! | GTTTGGTTCCACTTTTAGAG+GGG | + | chr8_3:11495353-11495372 | None:intergenic | 40.0% |
| AACCGATCGTATATTCGAAC+TGG | - | chr8_3:11495456-11495475 | Msa1276720:CDS | 40.0% | |
| ACCGATCGTATATTCGAACT+GGG | - | chr8_3:11495457-11495476 | Msa1276720:CDS | 40.0% | |
| ACCCAGTTCGAATATACGAT+CGG | + | chr8_3:11495461-11495480 | None:intergenic | 40.0% | |
| AATGAGGTGAAAAGCTCAGA+AGG | + | chr8_3:11495601-11495620 | None:intergenic | 40.0% | |
| TATTCACGCACAACAGTTAC+TGG | + | chr8_3:11495739-11495758 | None:intergenic | 40.0% | |
| ! | ACTGTTCAGGGCATTTGTTA+AGG | + | chr8_3:11496301-11496320 | None:intergenic | 40.0% |
| AACAAATTGGCCCTTAAGCT+AGG | - | chr8_3:11496352-11496371 | Msa1276720:intron | 40.0% | |
| ACAAATTGGCCCTTAAGCTA+GGG | - | chr8_3:11496353-11496372 | Msa1276720:intron | 40.0% | |
| AAAAGAAGCCCCTAGCTTAA+GGG | + | chr8_3:11496365-11496384 | None:intergenic | 40.0% | |
| ! | ACTTAGATGTAGTGGCGTTT+TGG | - | chr8_3:11496545-11496564 | Msa1276720:intron | 40.0% |
| AACCTTTGGTAAAGACGAGA+TGG | - | chr8_3:11496650-11496669 | Msa1276720:intron | 40.0% | |
| AACCATCTCGTCTTTACCAA+AGG | + | chr8_3:11496655-11496674 | None:intergenic | 40.0% | |
| AAGACGAGATGGTTATGTGA+AGG | - | chr8_3:11496661-11496680 | Msa1276720:intron | 40.0% | |
| !!! | CTGTTGGATTCCTTTTTTGC+GGG | - | chr8_3:11496813-11496832 | Msa1276720:intron | 40.0% |
| ACAGCAAAAACCCGCAAAAA+AGG | + | chr8_3:11496826-11496845 | None:intergenic | 40.0% | |
| AAGAAATGCTCTTGTGAACG+CGG | - | chr8_3:11497042-11497061 | Msa1276720:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | - | chr8_3:11497223-11497242 | Msa1276720:intron | 40.0% | |
| GAGTCAAATCACTAGAGGTA+AGG | - | chr8_3:11497250-11497269 | Msa1276720:intron | 40.0% | |
| CTTATCCTACTAAGTGAGGT+CGG | + | chr8_3:11497387-11497406 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCTACTAAGTG+AGG | + | chr8_3:11497391-11497410 | None:intergenic | 40.0% |
| TCACTTAGTAGGATAAGGCT+TGG | - | chr8_3:11497390-11497409 | Msa1276720:intron | 40.0% | |
| ! | TAAGGCTTGGTTGTTGTTGT+TGG | - | chr8_3:11497403-11497422 | Msa1276720:intron | 40.0% |
| ! | CACATTTTACACCTCACACA+AGG | + | chr8_3:11497584-11497603 | None:intergenic | 40.0% |
| GCTATGGTGCCTTCAAATTA+AGG | - | chr8_3:11497655-11497674 | Msa1276720:intron | 40.0% | |
| TGGTGCCTTCAAATTAAGGA+AGG | - | chr8_3:11497659-11497678 | Msa1276720:intron | 40.0% | |
| AAATTAAGGAAGGACATGCC+TGG | - | chr8_3:11497669-11497688 | Msa1276720:intron | 40.0% | |
| AATTAAGGAAGGACATGCCT+GGG | - | chr8_3:11497670-11497689 | Msa1276720:intron | 40.0% | |
| !! | TTCCTCTTTTCGCTTTTCTC+CGG | + | chr8_3:11498889-11498908 | None:intergenic | 40.0% |
| GGTCTCATACTGAAACAGAA+AGG | - | chr8_3:11499038-11499057 | Msa1276720:intron | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | - | chr8_3:11499099-11499118 | Msa1276720:intron | 40.0% | |
| GCTATCAACTGTAGTGCATA+AGG | + | chr8_3:11499147-11499166 | None:intergenic | 40.0% | |
| CTCCAATGTTCTCTATGCTA+AGG | - | chr8_3:11499418-11499437 | Msa1276720:intron | 40.0% | |
| ATCCGTCGTGAATACTCTAT+GGG | + | chr8_3:11499471-11499490 | None:intergenic | 40.0% | |
| TATCCGTCGTGAATACTCTA+TGG | + | chr8_3:11499472-11499491 | None:intergenic | 40.0% | |
| TACCAAGCACGATAATCACA+CGG | + | chr8_3:11499698-11499717 | None:intergenic | 40.0% | |
| TGTGATTATCGTGCTTGGTA+TGG | - | chr8_3:11499698-11499717 | Msa1276720:intron | 40.0% | |
| TCTTGCAGCCAAATGATTCT+CGG | - | chr8_3:11499789-11499808 | Msa1276720:intron | 40.0% | |
| ATCCACAACCGAGAATCATT+TGG | + | chr8_3:11499800-11499819 | None:intergenic | 40.0% | |
| AGAGTATGGAATCTGAAGAG+AGG | - | chr8_3:11499999-11500018 | Msa1276720:intron | 40.0% | |
| GAGTATGGAATCTGAAGAGA+GGG | - | chr8_3:11500000-11500019 | Msa1276720:intron | 40.0% | |
| ACACGCCTTCTTGATTATAC+TGG | - | chr8_3:11500109-11500128 | Msa1276720:intron | 40.0% | |
| TAGCTTCAGACTCATGTTCT+TGG | + | chr8_3:11500505-11500524 | None:intergenic | 40.0% | |
| ! | TCTGTTTCTCTTGCTCAATC+TGG | - | chr8_3:11500707-11500726 | Msa1276720:CDS | 40.0% |
| GTCTGTGTCAGTGTAAGAGA+GGG | + | chr8_3:11494483-11494502 | None:intergenic | 45.0% | |
| TGTCTGTGTCAGTGTAAGAG+AGG | + | chr8_3:11494484-11494503 | None:intergenic | 45.0% | |
| ATACACACGTCTTCGATCAG+AGG | - | chr8_3:11494561-11494580 | Msa1276720:three_prime_UTR | 45.0% | |
| !! | CTCTGAAACCTCGTGTTTGA+TGG | + | chr8_3:11494705-11494724 | None:intergenic | 45.0% |
| TCAAACACGAGGTTTCAGAG+AGG | - | chr8_3:11494705-11494724 | Msa1276720:three_prime_UTR | 45.0% | |
| ACATACGAAACACCGGCAAT+CGG | + | chr8_3:11494786-11494805 | None:intergenic | 45.0% | |
| AGTAGCCACATACGAAACAC+CGG | + | chr8_3:11494793-11494812 | None:intergenic | 45.0% | |
| TGTTTCGTATGTGGCTACTC+CGG | - | chr8_3:11494794-11494813 | Msa1276720:exon | 45.0% | |
| CGAAAGCAACCAAACATGCT+AGG | - | chr8_3:11495296-11495315 | Msa1276720:CDS | 45.0% | |
| ! | GGGGCCAAAATTGATTCTAG+AGG | + | chr8_3:11495334-11495353 | None:intergenic | 45.0% |
| CCTATGTGCACACCATATGT+TGG | + | chr8_3:11495386-11495405 | None:intergenic | 45.0% | |
| CCAACATATGGTGTGCACAT+AGG | - | chr8_3:11495383-11495402 | Msa1276720:CDS | 45.0% | |
| ATTCGAACTGGGTAACGAAG+TGG | - | chr8_3:11495468-11495487 | Msa1276720:CDS | 45.0% | |
| TCAGAAGGACACTCAACCAT+AGG | + | chr8_3:11495586-11495605 | None:intergenic | 45.0% | |
| CGGTTAGAAGTTGCTTAAGC+TGG | - | chr8_3:11495829-11495848 | Msa1276720:CDS | 45.0% | |
| ! | GCCATATAAACATGGTGTCG+CGG | + | chr8_3:11495993-11496012 | None:intergenic | 45.0% |
| !! | AAATGCTCAAGAGTGCCCTT+AGG | - | chr8_3:11496165-11496184 | Msa1276720:CDS | 45.0% |
| ! | TGCCCTTAGGACATTGGTTA+AGG | - | chr8_3:11496178-11496197 | Msa1276720:CDS | 45.0% |
| ! | GCCCTTAGGACATTGGTTAA+GGG | - | chr8_3:11496179-11496198 | Msa1276720:CDS | 45.0% |
| CCCCTTAACCAATGTCCTAA+GGG | + | chr8_3:11496183-11496202 | None:intergenic | 45.0% | |
| ! | CCCTTAGGACATTGGTTAAG+GGG | - | chr8_3:11496180-11496199 | Msa1276720:CDS | 45.0% |
| TCCCCTTAACCAATGTCCTA+AGG | + | chr8_3:11496184-11496203 | None:intergenic | 45.0% | |
| TATGCTAACAAGTGCCCTGA+GGG | + | chr8_3:11496325-11496344 | None:intergenic | 45.0% | |
| TTATGCTAACAAGTGCCCTG+AGG | + | chr8_3:11496326-11496345 | None:intergenic | 45.0% | |
| CAAATTGGCCCTTAAGCTAG+GGG | - | chr8_3:11496354-11496373 | Msa1276720:intron | 45.0% | |
| CAAAAGAAGCCCCTAGCTTA+AGG | + | chr8_3:11496366-11496385 | None:intergenic | 45.0% | |
| CCACTACATCTAAGTCCACA+AGG | + | chr8_3:11496540-11496559 | None:intergenic | 45.0% | |
| CCTTGTGGACTTAGATGTAG+TGG | - | chr8_3:11496537-11496556 | Msa1276720:intron | 45.0% | |
| !! | TGGGCAAGTCTATTTTGGGT+TGG | - | chr8_3:11496742-11496761 | Msa1276720:intron | 45.0% |
| !!! | GCAAGTCTATTTTGGGTTGG+AGG | - | chr8_3:11496745-11496764 | Msa1276720:intron | 45.0% |
| !! | TTTTGCTGTGTTGTCAGTCC+CGG | - | chr8_3:11496837-11496856 | Msa1276720:intron | 45.0% |
| CATAGCAACCCAGAATTGTG+TGG | + | chr8_3:11497080-11497099 | None:intergenic | 45.0% | |
| CACACAATTCTGGGTTGCTA+TGG | - | chr8_3:11497078-11497097 | Msa1276720:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | - | chr8_3:11497226-11497245 | Msa1276720:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | - | chr8_3:11497227-11497246 | Msa1276720:intron | 45.0% | |
| CGACCTCACTTAGTAGGATA+AGG | - | chr8_3:11497385-11497404 | Msa1276720:intron | 45.0% | |
| CACACAAGGGAAACATGAAG+AGG | + | chr8_3:11497570-11497589 | None:intergenic | 45.0% | |
| CTTCATGTTTCCCTTGTGTG+AGG | - | chr8_3:11497570-11497589 | Msa1276720:intron | 45.0% | |
| ATGCACTGCATCAGATCAGT+TGG | + | chr8_3:11498757-11498776 | None:intergenic | 45.0% | |
| ! | CCTGTAGGAAGTACAAAGCA+TGG | + | chr8_3:11498866-11498885 | None:intergenic | 45.0% |
| CCATGCTTTGTACTTCCTAC+AGG | - | chr8_3:11498863-11498882 | Msa1276720:intron | 45.0% | |
| ! | ATAGAACTTGACGGACCTCT+GGG | - | chr8_3:11498915-11498934 | Msa1276720:intron | 45.0% |
| !! | ACAGCATCACTTTTACCCAG+AGG | + | chr8_3:11498933-11498952 | None:intergenic | 45.0% |
| TCCATGCATTCCAGTTCCAA+GGG | + | chr8_3:11499112-11499131 | None:intergenic | 45.0% | |
| CCTTAATTCTTGGTAGGCAC+TGG | + | chr8_3:11499219-11499238 | None:intergenic | 45.0% | |
| CCAGTGCCTACCAAGAATTA+AGG | - | chr8_3:11499216-11499235 | Msa1276720:intron | 45.0% | |
| TCCTTACAGAGTGGAAGACT+TGG | - | chr8_3:11499388-11499407 | Msa1276720:intron | 45.0% | |
| TCCAAGTCTTCCACTCTGTA+AGG | + | chr8_3:11499392-11499411 | None:intergenic | 45.0% | |
| TCGTGAATACTCTATGGGCA+AGG | + | chr8_3:11499466-11499485 | None:intergenic | 45.0% | |
| ! | TGCCCATAGAGTATTCACGA+CGG | - | chr8_3:11499466-11499485 | Msa1276720:intron | 45.0% |
| TATATCAACAGCCCGACGAT+AGG | + | chr8_3:11499672-11499691 | None:intergenic | 45.0% | |
| ACCAAGCACGATAATCACAC+GGG | + | chr8_3:11499697-11499716 | None:intergenic | 45.0% | |
| TTATCGTGCTTGGTATGGAC+TGG | - | chr8_3:11499703-11499722 | Msa1276720:intron | 45.0% | |
| TATCGTGCTTGGTATGGACT+GGG | - | chr8_3:11499704-11499723 | Msa1276720:intron | 45.0% | |
| AGCCAAATGATTCTCGGTTG+TGG | - | chr8_3:11499795-11499814 | Msa1276720:intron | 45.0% | |
| TTCTCGGTTGTGGATAGCTA+TGG | - | chr8_3:11499805-11499824 | Msa1276720:intron | 45.0% | |
| AGTAAAACGCTGCCTCTTCA+GGG | + | chr8_3:11499964-11499983 | None:intergenic | 45.0% | |
| TAGTAAAACGCTGCCTCTTC+AGG | + | chr8_3:11499965-11499984 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+CGG | - | chr8_3:11500004-11500023 | Msa1276720:intron | 45.0% | |
| CTGGGCCAGTATAATCAAGA+AGG | + | chr8_3:11500117-11500136 | None:intergenic | 45.0% | |
| TTGTGCTGCGTCAGAACTAA+TGG | - | chr8_3:11500380-11500399 | Msa1276720:CDS | 45.0% | |
| TCTCTTGCTCAATCTGGTGA+AGG | - | chr8_3:11500713-11500732 | Msa1276720:CDS | 45.0% | |
| !!! | TTAAAATAGAAATTTTATAT+TGG | - | chr8_3:11498165-11498184 | Msa1276720:intron | 5.0% |
| ! | CCAACAACAACACCGATTGC+CGG | - | chr8_3:11494771-11494790 | Msa1276720:three_prime_UTR | 50.0% |
| GATTGCCGGTGTTTCGTATG+TGG | - | chr8_3:11494785-11494804 | Msa1276720:three_prime_UTR | 50.0% | |
| GTATGTGGCTACTCCGGTTA+TGG | - | chr8_3:11494800-11494819 | Msa1276720:exon | 50.0% | |
| GCCGCGACACCATGTTTATA+TGG | - | chr8_3:11495989-11496008 | Msa1276720:CDS | 50.0% | |
| !! | CAAGAGTGCCCTTAGGACAT+TGG | - | chr8_3:11496172-11496191 | Msa1276720:CDS | 50.0% |
| !!! | AGTGGCGTTTTGGAGAGCTT+AGG | - | chr8_3:11496555-11496574 | Msa1276720:intron | 50.0% |
| ! | GGTGTGTACGTTGTGCTGAT+GGG | - | chr8_3:11496600-11496619 | Msa1276720:intron | 50.0% |
| TTATGTGAAGGTAGCGCCAG+CGG | - | chr8_3:11496673-11496692 | Msa1276720:intron | 50.0% | |
| ! | TCATGTTTCTAACCCTCCGC+TGG | + | chr8_3:11496692-11496711 | None:intergenic | 50.0% |
| AACCCCAAAACTGGGATAGC+AGG | - | chr8_3:11496874-11496893 | Msa1276720:intron | 50.0% | |
| ACCCCAAAACTGGGATAGCA+GGG | - | chr8_3:11496875-11496894 | Msa1276720:intron | 50.0% | |
| ! | ACCCTGCTATCCCAGTTTTG+GGG | + | chr8_3:11496879-11496898 | None:intergenic | 50.0% |
| ! | CACCCTGCTATCCCAGTTTT+GGG | + | chr8_3:11496880-11496899 | None:intergenic | 50.0% |
| ! | ACACCCTGCTATCCCAGTTT+TGG | + | chr8_3:11496881-11496900 | None:intergenic | 50.0% |
| TGGGTTGCTATGGCGAGTTT+GGG | - | chr8_3:11497088-11497107 | Msa1276720:intron | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | - | chr8_3:11497228-11497247 | Msa1276720:intron | 50.0% | |
| GAGGGGAGTCAAATCACTAG+AGG | - | chr8_3:11497245-11497264 | Msa1276720:intron | 50.0% | |
| TGTAGCCGACCTCACTTAGT+AGG | - | chr8_3:11497379-11497398 | Msa1276720:intron | 50.0% | |
| CTGGCTGTTGCCTTCAAAGT+TGG | - | chr8_3:11497823-11497842 | Msa1276720:intron | 50.0% | |
| GCTTTGTACTTCCTACAGGC+CGG | - | chr8_3:11498867-11498886 | Msa1276720:intron | 50.0% | |
| ! | GATAGAACTTGACGGACCTC+TGG | - | chr8_3:11498914-11498933 | Msa1276720:intron | 50.0% |
| TTTGGCACGCACAGTTCTTG+TGG | - | chr8_3:11499070-11499089 | Msa1276720:intron | 50.0% | |
| ACCCTTGGAACTGGAATGCA+TGG | - | chr8_3:11499108-11499127 | Msa1276720:intron | 50.0% | |
| GTCCATGCATTCCAGTTCCA+AGG | + | chr8_3:11499113-11499132 | None:intergenic | 50.0% | |
| GAGGACTGATCCTTACAGAG+TGG | - | chr8_3:11499379-11499398 | Msa1276720:intron | 50.0% | |
| TCTCTCTGCTTGGACACTCA+TGG | - | chr8_3:11499601-11499620 | Msa1276720:intron | 50.0% | |
| CTCTCTGCTTGGACACTCAT+GGG | - | chr8_3:11499602-11499621 | Msa1276720:intron | 50.0% | |
| GAAAAATACTCCTGCCGCTG+TGG | - | chr8_3:11499643-11499662 | Msa1276720:intron | 50.0% | |
| ACCCGTGTGATTATCGTGCT+TGG | - | chr8_3:11499693-11499712 | Msa1276720:intron | 50.0% | |
| CTGAATGCAGCTTCGCTAGT+TGG | + | chr8_3:11499931-11499950 | None:intergenic | 50.0% | |
| AGCAAACCCTCAACCATGTG+AGG | + | chr8_3:11500031-11500050 | None:intergenic | 50.0% | |
| CTGCTGCCCTGCATTAAGGA+AGG | + | chr8_3:11494641-11494660 | None:intergenic | 55.0% | |
| TGCTCTGCTGCCCTGCATTA+AGG | + | chr8_3:11494645-11494664 | None:intergenic | 55.0% | |
| ATGCAGGGCAGCAGAGCAAT+TGG | - | chr8_3:11494647-11494666 | Msa1276720:three_prime_UTR | 55.0% | |
| AGGGCAGCAGAGCAATTGGT+AGG | - | chr8_3:11494651-11494670 | Msa1276720:three_prime_UTR | 55.0% | |
| !! | CCGGCAATCGGTGTTGTTGT+TGG | + | chr8_3:11494774-11494793 | None:intergenic | 55.0% |
| GGCTACTCCGGTTATGGAAG+AGG | - | chr8_3:11494806-11494825 | Msa1276720:exon | 55.0% | |
| ACACTAGGGTCTAGCACACG+TGG | - | chr8_3:11495964-11495983 | Msa1276720:CDS | 55.0% | |
| GGGTGTGTACGTTGTGCTGA+TGG | - | chr8_3:11496599-11496618 | Msa1276720:intron | 55.0% | |
| AGAGCGGTCAACCCCAAAAC+TGG | - | chr8_3:11496865-11496884 | Msa1276720:intron | 55.0% | |
| GAGCGGTCAACCCCAAAACT+GGG | - | chr8_3:11496866-11496885 | Msa1276720:intron | 55.0% | |
| ACTGGGATAGCAGGGTGTGA+TGG | - | chr8_3:11496883-11496902 | Msa1276720:intron | 55.0% | |
| TCTTGTGAACGCGGCCATGA+CGG | - | chr8_3:11497051-11497070 | Msa1276720:intron | 55.0% | |
| GAATTGTGTGGCGACCGTCA+TGG | + | chr8_3:11497068-11497087 | None:intergenic | 55.0% | |
| TGACGGTCGCCACACAATTC+TGG | - | chr8_3:11497068-11497087 | Msa1276720:intron | 55.0% | |
| GACGGTCGCCACACAATTCT+GGG | - | chr8_3:11497069-11497088 | Msa1276720:intron | 55.0% | |
| CTGGGTTGCTATGGCGAGTT+TGG | - | chr8_3:11497087-11497106 | Msa1276720:intron | 55.0% | |
| GGGTTGCTATGGCGAGTTTG+GGG | - | chr8_3:11497089-11497108 | Msa1276720:intron | 55.0% | |
| GGTTGCTATGGCGAGTTTGG+GGG | - | chr8_3:11497090-11497109 | Msa1276720:intron | 55.0% | |
| ACAACACGCTGCCGCTCTAA+CGG | - | chr8_3:11497120-11497139 | Msa1276720:intron | 55.0% | |
| ! | TGAGCTCTGGCGCATGCTAA+TGG | - | chr8_3:11498726-11498745 | Msa1276720:intron | 55.0% |
| !! | TTCGCTTTTCTCCGGCCTGT+AGG | + | chr8_3:11498881-11498900 | None:intergenic | 55.0% |
| GGCCGGAGAAAAGCGAAAAG+AGG | - | chr8_3:11498884-11498903 | Msa1276720:intron | 55.0% | |
| CCTTATCGAGCATGCGAAGC+TGG | + | chr8_3:11499850-11499869 | None:intergenic | 55.0% | |
| CCAGCTTCGCATGCTCGATA+AGG | - | chr8_3:11499847-11499866 | Msa1276720:intron | 55.0% | |
| GCGAAGCTGCATTCAGAGCT+CGG | - | chr8_3:11499935-11499954 | Msa1276720:intron | 55.0% | |
| GACGGACCTCACATGGTTGA+GGG | - | chr8_3:11500022-11500041 | Msa1276720:intron | 55.0% | |
| ATGCCCTGAACAGTGCCCTC+AGG | - | chr8_3:11496307-11496326 | Msa1276720:intron | 60.0% | |
| TGCCCTGAACAGTGCCCTCA+GGG | - | chr8_3:11496308-11496327 | Msa1276720:intron | 60.0% | |
| !! | TGCCCTGAGGGCACTGTTCA+GGG | + | chr8_3:11496313-11496332 | None:intergenic | 60.0% |
| GTCAGTCCCGGATAGCAGAG+CGG | - | chr8_3:11496849-11496868 | Msa1276720:intron | 60.0% | |
| GGTTGACCGCTCTGCTATCC+GGG | + | chr8_3:11496858-11496877 | None:intergenic | 60.0% | |
| GGGTTGACCGCTCTGCTATC+CGG | + | chr8_3:11496859-11496878 | None:intergenic | 60.0% | |
| TGCTATGGCGAGTTTGGGGG+CGG | - | chr8_3:11497093-11497112 | Msa1276720:intron | 60.0% | |
| GGCAACTAGCGCCGTTAGAG+CGG | + | chr8_3:11497134-11497153 | None:intergenic | 60.0% | |
| CCGACGATAGGCATCCACAG+CGG | + | chr8_3:11499660-11499679 | None:intergenic | 60.0% | |
| CCGCTGTGGATGCCTATCGT+CGG | - | chr8_3:11499657-11499676 | Msa1276720:intron | 60.0% | |
| CGCTGTGGATGCCTATCGTC+GGG | - | chr8_3:11499658-11499677 | Msa1276720:intron | 60.0% | |
| AGAGAGGGACGGACCTCACA+TGG | - | chr8_3:11500015-11500034 | Msa1276720:intron | 60.0% | |
| GGACGGACCTCACATGGTTG+AGG | - | chr8_3:11500021-11500040 | Msa1276720:intron | 60.0% | |
| !! | GTGCCCTGAGGGCACTGTTC+AGG | + | chr8_3:11496314-11496333 | None:intergenic | 65.0% |
| TGTGAAGGTAGCGCCAGCGG+AGG | - | chr8_3:11496676-11496695 | Msa1276720:intron | 65.0% | |
| GTGAAGGTAGCGCCAGCGGA+GGG | - | chr8_3:11496677-11496696 | Msa1276720:intron | 65.0% | |
| CGATAGGCATCCACAGCGGC+AGG | + | chr8_3:11499656-11499675 | None:intergenic | 65.0% | |
| AGAGCTCGGACGCCCTGAAG+AGG | - | chr8_3:11499949-11499968 | Msa1276720:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 11494327 | 11500804 | 11494327 | ID=Msa1276720;Name=Msa1276720 |
| chr8_3 | mRNA | 11494327 | 11500804 | 11494327 | ID=Msa1276720-mRNA-1;Parent=Msa1276720;Name=Msa1276720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=30|1|1|1|1|1|4|482|577 |
| chr8_3 | exon | 11494327 | 11494892 | 11494327 | ID=Msa1276720-mRNA-1:exon:4688;Parent=Msa1276720-mRNA-1 |
| chr8_3 | exon | 11494996 | 11496246 | 11494996 | ID=Msa1276720-mRNA-1:exon:4687;Parent=Msa1276720-mRNA-1 |
| chr8_3 | exon | 11500166 | 11500478 | 11500166 | ID=Msa1276720-mRNA-1:exon:4686;Parent=Msa1276720-mRNA-1 |
| chr8_3 | exon | 11500689 | 11500804 | 11500689 | ID=Msa1276720-mRNA-1:exon:4685;Parent=Msa1276720-mRNA-1 |
| chr8_3 | five_prime_UTR | 11500775 | 11500804 | 11500775 | ID=Msa1276720-mRNA-1:five_prime_utr;Parent=Msa1276720-mRNA-1 |
| chr8_3 | CDS | 11500689 | 11500774 | 11500689 | ID=Msa1276720-mRNA-1:cds;Parent=Msa1276720-mRNA-1 |
| chr8_3 | CDS | 11500166 | 11500478 | 11500166 | ID=Msa1276720-mRNA-1:cds;Parent=Msa1276720-mRNA-1 |
| chr8_3 | CDS | 11494996 | 11496246 | 11494996 | ID=Msa1276720-mRNA-1:cds;Parent=Msa1276720-mRNA-1 |
| chr8_3 | CDS | 11494809 | 11494892 | 11494809 | ID=Msa1276720-mRNA-1:cds;Parent=Msa1276720-mRNA-1 |
| chr8_3 | three_prime_UTR | 11494327 | 11494808 | 11494327 | ID=Msa1276720-mRNA-1:three_prime_utr;Parent=Msa1276720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
