Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443910 | sp|Q9STS3|CDC23_ARATH | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443910 | G7L7L4 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1235240 | Msa1443910 | 0.840190 | 1.009648e-57 | -8.615850e-47 |
| Msa1276720 | Msa1443910 | 0.969048 | 1.491636e-129 | -8.615850e-47 |
| Msa1174550 | Msa1443910 | 0.966833 | 1.879023e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443910 | MtrunA17_Chr8g0344341 | 99.480 | 577 | 3 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1196 |
| Msa1443910 | MtrunA17_Chr1g0205411 | 86.528 | 579 | 73 | 4 | 1 | 576 | 1 | 577 | 0.0 | 1045 |
| Msa1443910 | MtrunA17_Chr8g0356451 | 75.862 | 87 | 21 | 0 | 419 | 505 | 1 | 87 | 7.96e-42 | 145 |
| Msa1443910 | MtrunA17_Chr6g0456451 | 28.159 | 277 | 190 | 2 | 270 | 546 | 460 | 727 | 7.71e-29 | 121 |
| Msa1443910 | MtrunA17_Chr7g0221321 | 27.055 | 292 | 203 | 3 | 255 | 546 | 444 | 725 | 2.85e-26 | 114 |
| Msa1443910 | MtrunA17_Chr8g0356461 | 77.778 | 63 | 11 | 2 | 517 | 576 | 1 | 63 | 4.60e-25 | 98.2 |
| Msa1443910 | MtrunA17_Chr2g0286231 | 25.543 | 184 | 135 | 2 | 234 | 417 | 211 | 392 | 5.00e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443910 | AT3G48150.1 | 73.702 | 578 | 150 | 1 | 1 | 576 | 1 | 578 | 0.0 | 925 |
| Msa1443910 | AT3G48150.2 | 73.978 | 465 | 119 | 1 | 114 | 576 | 1 | 465 | 0.0 | 750 |
| Msa1443910 | AT2G20000.1 | 27.243 | 301 | 210 | 2 | 255 | 555 | 434 | 725 | 2.68e-27 | 117 |
| Msa1443910 | AT3G16320.2 | 31.441 | 229 | 150 | 3 | 242 | 463 | 390 | 618 | 5.06e-27 | 116 |
| Msa1443910 | AT3G16320.1 | 31.441 | 229 | 150 | 3 | 242 | 463 | 401 | 629 | 5.51e-27 | 116 |
| Msa1443910 | AT2G20000.2 | 29.907 | 214 | 150 | 0 | 255 | 468 | 434 | 647 | 9.89e-27 | 115 |
| Msa1443910 | AT3G16320.4 | 31.944 | 144 | 96 | 1 | 242 | 383 | 401 | 544 | 2.15e-16 | 82.8 |
| Msa1443910 | AT3G16320.3 | 31.944 | 144 | 96 | 1 | 242 | 383 | 390 | 533 | 2.40e-16 | 82.8 |
Find 123 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAATCTTGTTGTATTAT+TGG | 0.082834 | tig0030602:+27450 | Msa1443910:CDS |
| CTATGATGACTAAACATATT+AGG | 0.175859 | tig0030602:+28494 | Msa1443910:three_prime_UTR |
| AAGATCTTATGCTCTTTATT+TGG | 0.192432 | tig0030602:+22877 | Msa1443910:CDS |
| GGGAATTATTACAGTTTAAA+AGG | 0.197539 | tig0030602:+27471 | Msa1443910:CDS |
| TAGTAAAACGCTGCCTCTTC+AGG | 0.213627 | tig0030602:-27912 | None:intergenic |
| CTGAATCTTGTTGTATTATT+GGG | 0.236148 | tig0030602:+27451 | Msa1443910:CDS |
| CATTATGCATCCTTAATTCT+TGG | 0.262649 | tig0030602:-27176 | None:intergenic |
| TAGCTTCAGACTCATGTTCT+TGG | 0.268310 | tig0030602:-28452 | None:intergenic |
| GAATATCTACTCGGAACTTT+TGG | 0.287414 | tig0030602:+27216 | Msa1443910:CDS |
| CATGTTCTTCGTGATCAAAT+TGG | 0.290724 | tig0030602:+22836 | Msa1443910:CDS |
| TATCCGTCGTGAATACTCTA+TGG | 0.295435 | tig0030602:-27419 | None:intergenic |
| TCTGTTTCTCTTGCTCAATC+TGG | 0.299366 | tig0030602:+28657 | Msa1443910:three_prime_UTR |
| AGTGCTTCATTAGAGAAATT+AGG | 0.308119 | tig0030602:-28268 | None:intergenic |
| GTATGTGGCTACTCCGGTTA+TGG | 0.336064 | tig0030602:+22733 | Msa1443910:CDS |
| CTCTGAAACCTCGTGTTTGA+TGG | 0.342510 | tig0030602:-22635 | None:intergenic |
| TATGATGACTAAACATATTA+GGG | 0.343475 | tig0030602:+28495 | Msa1443910:three_prime_UTR |
| AGCAAGAGAAACAGAAAATC+AGG | 0.349057 | tig0030602:-28649 | None:intergenic |
| TTTGATGGAGTAAACTTAGA+TGG | 0.360770 | tig0030602:-22620 | None:intergenic |
| ATTTAAAATAGTTGTAGAAT+AGG | 0.360938 | tig0030602:+28584 | Msa1443910:three_prime_UTR |
| CCAATAATACAACAAGATTC+AGG | 0.368422 | tig0030602:-27450 | None:intergenic |
| GTCATCATAGAAGAGAATAA+AGG | 0.369455 | tig0030602:-28481 | None:intergenic |
| TGGAAACCAGATTACTACTT+TGG | 0.377991 | tig0030602:-28432 | None:intergenic |
| TCTTGCAGCCAAATGATTCT+CGG | 0.391224 | tig0030602:+27739 | Msa1443910:CDS |
| ACACGCCTTCTTGATTATAC+TGG | 0.393914 | tig0030602:+28059 | Msa1443910:CDS |
| TTGTGCTGCGTCAGAACTAA+TGG | 0.399708 | tig0030602:+28330 | Msa1443910:three_prime_UTR |
| GATAGAACTTGACGGACCTC+TGG | 0.399973 | tig0030602:+26864 | Msa1443910:CDS |
| CCAGTGCCTACCAAGAATTA+AGG | 0.405369 | tig0030602:+27166 | Msa1443910:CDS |
| ATGTTCTTCGTGATCAAATT+GGG | 0.413042 | tig0030602:+22837 | Msa1443910:CDS |
| AATTCATCCTCTTCCATAAC+CGG | 0.419596 | tig0030602:-22746 | None:intergenic |
| GGGTTTGAATAGATTGTCAT+TGG | 0.421580 | tig0030602:-28627 | None:intergenic |
| GTAAGTCCAAAGTAGTAATC+TGG | 0.428030 | tig0030602:+28426 | Msa1443910:three_prime_UTR |
| TCTCTCTGCTTGGACACTCA+TGG | 0.430654 | tig0030602:+27551 | Msa1443910:CDS |
| TAAAAGTGATGCTGTGAATC+AGG | 0.432981 | tig0030602:+26888 | Msa1443910:CDS |
| TGATCAAATTGGGAGGAAAT+CGG | 0.441059 | tig0030602:+22847 | Msa1443910:CDS |
| GTCTTAATCTCAATAGTCAT+TGG | 0.443586 | tig0030602:+27124 | Msa1443910:CDS |
| GCTATCAACTGTAGTGCATA+AGG | 0.444872 | tig0030602:-27094 | None:intergenic |
| CCGGCAATCGGTGTTGTTGT+TGG | 0.446248 | tig0030602:-22704 | None:intergenic |
| CCAACAACAACACCGATTGC+CGG | 0.446537 | tig0030602:+22704 | Msa1443910:CDS |
| TAAATAGCTACCCTTGGAAC+TGG | 0.448123 | tig0030602:+27049 | Msa1443910:CDS |
| CAAATTCTCTCAAACTGTAC+TGG | 0.449897 | tig0030602:-27275 | None:intergenic |
| GTCTCTATTCCTCTTCCAAA+TGG | 0.454376 | tig0030602:+22354 | Msa1443910:CDS |
| GAAGAGGATGAATTTGTTGA+TGG | 0.454661 | tig0030602:+22755 | Msa1443910:CDS |
| ATGCAGGGCAGCAGAGCAAT+TGG | 0.455938 | tig0030602:+22580 | Msa1443910:intron |
| CCAGCTTCGCATGCTCGATA+AGG | 0.459121 | tig0030602:+27797 | Msa1443910:CDS |
| AGGAATTCGTTTCATTAGAG+AGG | 0.459664 | tig0030602:+26908 | Msa1443910:CDS |
| ATCCACAACCGAGAATCATT+TGG | 0.460057 | tig0030602:-27747 | None:intergenic |
| CTGAATGCAGCTTCGCTAGT+TGG | 0.462339 | tig0030602:-27878 | None:intergenic |
| CTCTCTGCTTGGACACTCAT+GGG | 0.470449 | tig0030602:+27552 | Msa1443910:CDS |
| GATTGCCGGTGTTTCGTATG+TGG | 0.471511 | tig0030602:+22718 | Msa1443910:CDS |
| TCCAAGTCTTCCACTCTGTA+AGG | 0.474410 | tig0030602:-27339 | None:intergenic |
| CCTTATCGAGCATGCGAAGC+TGG | 0.477242 | tig0030602:-27797 | None:intergenic |
| TTGGCGTAATCTCATGTGTT+CGG | 0.485540 | tig0030602:-22685 | None:intergenic |
| CCTTAATTCTTGGTAGGCAC+TGG | 0.488674 | tig0030602:-27166 | None:intergenic |
| GAGTATGGAATCTGAAGAGA+GGG | 0.490455 | tig0030602:+27950 | Msa1443910:CDS |
| TAATTTCTCTAATGAAGCAC+TGG | 0.490963 | tig0030602:+28270 | Msa1443910:exon |
| ACAGAAAGGCAATGATACTT+TGG | 0.492080 | tig0030602:+27002 | Msa1443910:CDS |
| GGCTACTCCGGTTATGGAAG+AGG | 0.498305 | tig0030602:+22739 | Msa1443910:CDS |
| CCATATAAGTACAAAAGAAA+AGG | 0.501668 | tig0030602:-26967 | None:intergenic |
| TCCTTACAGAGTGGAAGACT+TGG | 0.506974 | tig0030602:+27338 | Msa1443910:CDS |
| TCTCTTGCTCAATCTGGTGA+AGG | 0.511345 | tig0030602:+28663 | Msa1443910:three_prime_UTR |
| CGCTGTGGATGCCTATCGTC+GGG | 0.517609 | tig0030602:+27608 | Msa1443910:CDS |
| GACGGACCTCACATGGTTGA+GGG | 0.518538 | tig0030602:+27972 | Msa1443910:CDS |
| TTTGGCACGCACAGTTCTTG+TGG | 0.519291 | tig0030602:+27020 | Msa1443910:CDS |
| TGTGATTATCGTGCTTGGTA+TGG | 0.521126 | tig0030602:+27648 | Msa1443910:CDS |
| CCGCTGTGGATGCCTATCGT+CGG | 0.525627 | tig0030602:+27607 | Msa1443910:CDS |
| GCGAAGCTGCATTCAGAGCT+CGG | 0.527303 | tig0030602:+27885 | Msa1443910:CDS |
| CGATAGGCATCCACAGCGGC+AGG | 0.530461 | tig0030602:-27603 | None:intergenic |
| ACATACGAAACACCGGCAAT+CGG | 0.530765 | tig0030602:-22716 | None:intergenic |
| CTCCAATGTTCTCTATGCTA+AGG | 0.531177 | tig0030602:+27368 | Msa1443910:CDS |
| AGGCAATAAAATGTTACAGA+AGG | 0.533908 | tig0030602:+27817 | Msa1443910:CDS |
| ACCCTTGGAACTGGAATGCA+TGG | 0.534200 | tig0030602:+27058 | Msa1443910:CDS |
| ATGCATCCTTAATTCTTGGT+AGG | 0.534236 | tig0030602:-27172 | None:intergenic |
| AGCCAAATGATTCTCGGTTG+TGG | 0.535639 | tig0030602:+27745 | Msa1443910:CDS |
| GGACGGACCTCACATGGTTG+AGG | 0.535859 | tig0030602:+27971 | Msa1443910:CDS |
| GTCCATGCATTCCAGTTCCA+AGG | 0.536564 | tig0030602:-27060 | None:intergenic |
| GGAATTCGTTTCATTAGAGA+GGG | 0.537497 | tig0030602:+26909 | Msa1443910:CDS |
| ACCCGTGTGATTATCGTGCT+TGG | 0.539237 | tig0030602:+27643 | Msa1443910:CDS |
| AGTAAGTTACCATTTGGAAG+AGG | 0.540515 | tig0030602:-22363 | None:intergenic |
| TTATCGTGCTTGGTATGGAC+TGG | 0.541413 | tig0030602:+27653 | Msa1443910:CDS |
| AGTAAAACGCTGCCTCTTCA+GGG | 0.544822 | tig0030602:-27911 | None:intergenic |
| TTCTCGGTTGTGGATAGCTA+TGG | 0.550619 | tig0030602:+27755 | Msa1443910:CDS |
| TCTCAATAGTCATTGGATGA+AGG | 0.551481 | tig0030602:+27131 | Msa1443910:CDS |
| AAGTAATGAAGTGAATAGAA+AGG | 0.552141 | tig0030602:-27702 | None:intergenic |
| AATCTGTAAATAGCTACCCT+TGG | 0.556259 | tig0030602:+27043 | Msa1443910:CDS |
| GGCAATAAAATGTTACAGAA+GGG | 0.556837 | tig0030602:+27818 | Msa1443910:CDS |
| ATAGAACTTGACGGACCTCT+GGG | 0.563134 | tig0030602:+26865 | Msa1443910:CDS |
| ATCCGTCGTGAATACTCTAT+GGG | 0.563752 | tig0030602:-27418 | None:intergenic |
| TTCCTTAGCATAGAGAACAT+TGG | 0.567573 | tig0030602:-27370 | None:intergenic |
| GGCCGGAGAAAAGCGAAAAG+AGG | 0.569695 | tig0030602:+26834 | Msa1443910:intron |
| AGAGCTCGGACGCCCTGAAG+AGG | 0.573981 | tig0030602:+27899 | Msa1443910:CDS |
| GAAGAGTTGATAGAACTTGA+CGG | 0.586173 | tig0030602:+26856 | Msa1443910:CDS |
| TATATCAACAGCCCGACGAT+AGG | 0.587440 | tig0030602:-27619 | None:intergenic |
| TGTTTCGTATGTGGCTACTC+CGG | 0.589698 | tig0030602:+22727 | Msa1443910:CDS |
| GCAAGAGAAACAGAAAATCA+GGG | 0.598014 | tig0030602:-28648 | None:intergenic |
| GGTCTCATACTGAAACAGAA+AGG | 0.599721 | tig0030602:+26988 | Msa1443910:CDS |
| TCCATGCATTCCAGTTCCAA+GGG | 0.603030 | tig0030602:-27059 | None:intergenic |
| CTGGGCCAGTATAATCAAGA+AGG | 0.603911 | tig0030602:-28064 | None:intergenic |
| TATCGTGCTTGGTATGGACT+GGG | 0.604702 | tig0030602:+27654 | Msa1443910:CDS |
| AGTAGAATCAAATACAAGGT+GGG | 0.608330 | tig0030602:-28689 | None:intergenic |
| AGAGAGGGACGGACCTCACA+TGG | 0.611477 | tig0030602:+27965 | Msa1443910:CDS |
| CTATATTTGAAGATCTGTTG+AGG | 0.612589 | tig0030602:+27310 | Msa1443910:CDS |
| AGAGTATGGAATCTGAAGAG+AGG | 0.616817 | tig0030602:+27949 | Msa1443910:CDS |
| CTTCATTAGAGAAATTAGGA+AGG | 0.619845 | tig0030602:-28264 | None:intergenic |
| AGCAAACCCTCAACCATGTG+AGG | 0.622036 | tig0030602:-27978 | None:intergenic |
| TCGAAATATGAATATCTACT+CGG | 0.623030 | tig0030602:+27207 | Msa1443910:CDS |
| AAAGTTTACTAAGAGGGATG+CGG | 0.625884 | tig0030602:+28205 | Msa1443910:CDS |
| TCGTGAATACTCTATGGGCA+AGG | 0.631954 | tig0030602:-27413 | None:intergenic |
| CAATGTAAAAGGGATACGAT+AGG | 0.634646 | tig0030602:+28535 | Msa1443910:three_prime_UTR |
| AGGGCAGCAGAGCAATTGGT+AGG | 0.639451 | tig0030602:+22584 | Msa1443910:intron |
| TAGAAGTAGAATCAAATACA+AGG | 0.640501 | tig0030602:-28693 | None:intergenic |
| CAGGGAGTAGGTAACATCGT+TGG | 0.640993 | tig0030602:+22257 | None:intergenic |
| TACCAAGCACGATAATCACA+CGG | 0.642802 | tig0030602:-27645 | None:intergenic |
| TTCTTCGTGATCAAATTGGG+AGG | 0.645388 | tig0030602:+22840 | Msa1443910:CDS |
| ATGGAATCTGAAGAGAGGGA+CGG | 0.663753 | tig0030602:+27954 | Msa1443910:CDS |
| AAGTAGAATCAAATACAAGG+TGG | 0.668154 | tig0030602:-28690 | None:intergenic |
| CAAGAGAAACAGAAAATCAG+GGG | 0.674338 | tig0030602:-28647 | None:intergenic |
| AGTTTACTCCATCAAACACG+AGG | 0.685167 | tig0030602:+22627 | Msa1443910:CDS |
| AGTAGCCACATACGAAACAC+CGG | 0.691312 | tig0030602:-22723 | None:intergenic |
| ACCAAGCACGATAATCACAC+GGG | 0.697673 | tig0030602:-27644 | None:intergenic |
| GAGGACTGATCCTTACAGAG+TGG | 0.728386 | tig0030602:+27329 | Msa1443910:CDS |
| TGCCCATAGAGTATTCACGA+CGG | 0.777322 | tig0030602:+27416 | Msa1443910:CDS |
| CCGACGATAGGCATCCACAG+CGG | 0.791397 | tig0030602:-27607 | None:intergenic |
| TCAAACACGAGGTTTCAGAG+AGG | 0.797609 | tig0030602:+22638 | Msa1443910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAAATAAATAAAT+CGG | - | tig0030602:28116-28135 | None:intergenic | 0.0% |
| !! | TAAAAATAGAAATATTGTAT+TGG | + | tig0030602:24143-24162 | Msa1443910:intron | 10.0% |
| !! | ATTGTTTATATATAAACAAA+CGG | + | tig0030602:24380-24399 | Msa1443910:intron | 10.0% |
| !!! | AAAAATCAGTTATATATTTT+AGG | + | tig0030602:27502-27521 | Msa1443910:CDS | 10.0% |
| !!! | ATAAGCTTTTATAATTACTT+AGG | - | tig0030602:24017-24036 | None:intergenic | 15.0% |
| !!! | AGCTTATTTTGAAAATATTA+AGG | + | tig0030602:24030-24049 | Msa1443910:intron | 15.0% |
| !!! | AACTTGCATATATATTTTTT+GGG | - | tig0030602:26274-26293 | None:intergenic | 15.0% |
| !!! | TAACTTGCATATATATTTTT+TGG | - | tig0030602:26275-26294 | None:intergenic | 15.0% |
| !! | TTATTTAAATGTTACTCAAA+GGG | - | tig0030602:26670-26689 | None:intergenic | 15.0% |
| !! | TTTATTTAAATGTTACTCAA+AGG | - | tig0030602:26671-26690 | None:intergenic | 15.0% |
| !!! | ATAATTTTTGTTCAGTTTAA+GGG | - | tig0030602:27532-27551 | None:intergenic | 15.0% |
| !!! | ACTATTTTAAATCAAAAACA+TGG | - | tig0030602:28576-28595 | None:intergenic | 15.0% |
| !!! | ATTTAAAATAGTTGTAGAAT+AGG | + | tig0030602:28584-28603 | Msa1443910:three_prime_UTR | 15.0% |
| !! | AACATAAACATAGCAAAATA+GGG | - | tig0030602:22929-22948 | None:intergenic | 20.0% |
| !! | AAACATAAACATAGCAAAAT+AGG | - | tig0030602:22930-22949 | None:intergenic | 20.0% |
| !!! | AAGAATTGATTTTGAATTGT+AGG | + | tig0030602:23074-23093 | Msa1443910:intron | 20.0% |
| !! | CTGTATATATGATAATAGAT+TGG | - | tig0030602:23433-23452 | None:intergenic | 20.0% |
| !!! | CTATCTGATTTTTAAAAGAA+TGG | - | tig0030602:23702-23721 | None:intergenic | 20.0% |
| !! | TTATACCTATATGTTATACT+AGG | + | tig0030602:23887-23906 | Msa1443910:intron | 20.0% |
| !! | TATACCTATATGTTATACTA+GGG | + | tig0030602:23888-23907 | Msa1443910:intron | 20.0% |
| !!! | ATTCGTTTAAGATTAAACAA+AGG | + | tig0030602:24080-24099 | Msa1443910:intron | 20.0% |
| !!! | TTCGTTTAAGATTAAACAAA+GGG | + | tig0030602:24081-24100 | Msa1443910:intron | 20.0% |
| !! | AGAAATATTGTATTGGAAAA+TGG | + | tig0030602:24150-24169 | Msa1443910:intron | 20.0% |
| !! | ACAAAAAGTCTTAATACATT+TGG | - | tig0030602:24451-24470 | None:intergenic | 20.0% |
| !!! | AGAGTTTGATTTTTTATATC+TGG | + | tig0030602:24521-24540 | Msa1443910:intron | 20.0% |
| !!! | GAGTTTGATTTTTTATATCT+GGG | + | tig0030602:24522-24541 | Msa1443910:intron | 20.0% |
| !!! | TGTGTTAAATTCAATTTTTG+TGG | + | tig0030602:24665-24684 | Msa1443910:intron | 20.0% |
| !!! | GTGTTAAATTCAATTTTTGT+GGG | + | tig0030602:24666-24685 | Msa1443910:intron | 20.0% |
| !!! | GGCTGTAATTTTATATATTT+AGG | + | tig0030602:24848-24867 | Msa1443910:intron | 20.0% |
| !! | TTAAATCTGATAATTTCTGT+TGG | + | tig0030602:25688-25707 | Msa1443910:intron | 20.0% |
| !! | AACACTAAAAATTAAAACAC+TGG | + | tig0030602:25773-25792 | Msa1443910:intron | 20.0% |
| !!! | AACTATTTCTTACTTATACA+AGG | - | tig0030602:26037-26056 | None:intergenic | 20.0% |
| !! | AATGACGAGATTAAAAAATA+TGG | + | tig0030602:26073-26092 | Msa1443910:intron | 20.0% |
| !! | ATGACGAGATTAAAAAATAT+GGG | + | tig0030602:26074-26093 | Msa1443910:intron | 20.0% |
| !!! | TAATAGTAGTAACTTTTTCT+CGG | - | tig0030602:26212-26231 | None:intergenic | 20.0% |
| !! | GTGCAAAAATAAATAAAAAG+AGG | - | tig0030602:26308-26327 | None:intergenic | 20.0% |
| !! | AGAAAACATTCTCTTAAAAA+GGG | - | tig0030602:26504-26523 | None:intergenic | 20.0% |
| !! | TATTTAAATGTTACTCAAAG+GGG | - | tig0030602:26669-26688 | None:intergenic | 20.0% |
| !!! | GATAATTTTTGTTCAGTTTA+AGG | - | tig0030602:27533-27552 | None:intergenic | 20.0% |
| !!! | TCATATATTTTTTACTCACT+GGG | - | tig0030602:28085-28104 | None:intergenic | 20.0% |
| !! | TATGATGACTAAACATATTA+GGG | + | tig0030602:28495-28514 | Msa1443910:three_prime_UTR | 20.0% |
| !!! | TGATTTTGTAACAATGTAAA+AGG | + | tig0030602:28524-28543 | Msa1443910:three_prime_UTR | 20.0% |
| !!! | GATTTTGTAACAATGTAAAA+GGG | + | tig0030602:28525-28544 | Msa1443910:three_prime_UTR | 20.0% |
| ! | AAGATCTTATGCTCTTTATT+TGG | + | tig0030602:22877-22896 | Msa1443910:CDS | 25.0% |
| ! | ATAGGATGACAAAATTTATG+TGG | - | tig0030602:23506-23525 | None:intergenic | 25.0% |
| !! | ACATAAATTTTGTCATCCTA+TGG | + | tig0030602:23505-23524 | Msa1443910:intron | 25.0% |
| ! | CATTTAAAGAAACAGTAATG+AGG | - | tig0030602:23555-23574 | None:intergenic | 25.0% |
| !!! | TTTTGGCTGATTTAAATACA+TGG | - | tig0030602:23733-23752 | None:intergenic | 25.0% |
| ! | TGTATTTAAATCAGCCAAAA+TGG | + | tig0030602:23733-23752 | Msa1443910:intron | 25.0% |
| !! | AGCTTTTATAATTACTTAGG+TGG | - | tig0030602:24014-24033 | None:intergenic | 25.0% |
| ! | TATATATAAACAAACGGCTT+TGG | + | tig0030602:24386-24405 | Msa1443910:intron | 25.0% |
| ! | ATATATAAACAAACGGCTTT+GGG | + | tig0030602:24387-24406 | Msa1443910:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTCCTTG+TGG | + | tig0030602:24465-24484 | Msa1443910:intron | 25.0% |
| ! | TTGTAATTTAGTACAACCTT+TGG | + | tig0030602:24579-24598 | Msa1443910:intron | 25.0% |
| ! | GCATAATTAATCAGTCTATT+TGG | - | tig0030602:24731-24750 | None:intergenic | 25.0% |
| !!! | ATTAATTATGCTGATTCTGT+TGG | + | tig0030602:24740-24759 | Msa1443910:intron | 25.0% |
| ! | AAATCCTATGATGTCAATAA+TGG | - | tig0030602:25099-25118 | None:intergenic | 25.0% |
| !! | TATTGACATCATAGGATTTT+TGG | + | tig0030602:25100-25119 | Msa1443910:intron | 25.0% |
| ! | AAAACTAACGAGAAACTATT+AGG | + | tig0030602:25228-25247 | Msa1443910:intron | 25.0% |
| ! | ACAGAACATATAACAACATT+AGG | + | tig0030602:25414-25433 | Msa1443910:intron | 25.0% |
| !!! | ATTTACTCTTTGATTTGAGT+TGG | + | tig0030602:25468-25487 | Msa1443910:intron | 25.0% |
| !! | AATTACTGATTAGAGAGATA+AGG | + | tig0030602:25729-25748 | Msa1443910:intron | 25.0% |
| !!! | TACTATCCCAGTTTTATTTA+CGG | - | tig0030602:25978-25997 | None:intergenic | 25.0% |
| !!! | AATCTCGTCATTTTTTTTTC+TGG | - | tig0030602:26065-26084 | None:intergenic | 25.0% |
| ! | CAGAAAACATTCTCTTAAAA+AGG | - | tig0030602:26505-26524 | None:intergenic | 25.0% |
| ! | TTAACAAAAGTAAGCATAAG+TGG | - | tig0030602:26528-26547 | None:intergenic | 25.0% |
| ! | ATTTAAATGTTACTCAAAGG+GGG | - | tig0030602:26668-26687 | None:intergenic | 25.0% |
| ! | CCATATAAGTACAAAAGAAA+AGG | - | tig0030602:26970-26989 | None:intergenic | 25.0% |
| !! | CCTTTTCTTTTGTACTTATA+TGG | + | tig0030602:26967-26986 | Msa1443910:CDS | 25.0% |
| ! | TCGAAATATGAATATCTACT+CGG | + | tig0030602:27207-27226 | Msa1443910:CDS | 25.0% |
| !! | CTGAATCTTGTTGTATTATT+GGG | + | tig0030602:27451-27470 | Msa1443910:CDS | 25.0% |
| ! | GGGAATTATTACAGTTTAAA+AGG | + | tig0030602:27471-27490 | Msa1443910:CDS | 25.0% |
| ! | AAGTAATGAAGTGAATAGAA+AGG | - | tig0030602:27705-27724 | None:intergenic | 25.0% |
| !!! | GTCATATATTTTTTACTCAC+TGG | - | tig0030602:28086-28105 | None:intergenic | 25.0% |
| ! | TCATACTAAATCATTCTTTC+AGG | + | tig0030602:28167-28186 | Msa1443910:intron | 25.0% |
| ! | CTATGATGACTAAACATATT+AGG | + | tig0030602:28494-28513 | Msa1443910:three_prime_UTR | 25.0% |
| ! | TAGAAGTAGAATCAAATACA+AGG | - | tig0030602:28696-28715 | None:intergenic | 25.0% |
| AGTTAGAGTAAGTTACCATT+TGG | - | tig0030602:22372-22391 | None:intergenic | 30.0% | |
| GAAGGAGAATGAAAATGAAA+TGG | - | tig0030602:22556-22575 | None:intergenic | 30.0% | |
| TTTGATGGAGTAAACTTAGA+TGG | - | tig0030602:22623-22642 | None:intergenic | 30.0% | |
| !! | TGATGGTGATTTTTATCTGT+TGG | + | tig0030602:22772-22791 | Msa1443910:CDS | 30.0% |
| ATGTTCTTCGTGATCAAATT+GGG | + | tig0030602:22837-22856 | Msa1443910:CDS | 30.0% | |
| CAAACATACACTGAACATTA+TGG | - | tig0030602:23042-23061 | None:intergenic | 30.0% | |
| CATAATGTTCAGTGTATGTT+TGG | + | tig0030602:23040-23059 | Msa1443910:intron | 30.0% | |
| ! | TAGGTAAAGTGATTTGTGTT+TGG | + | tig0030602:23093-23112 | Msa1443910:intron | 30.0% |
| ! | AGGTAAAGTGATTTGTGTTT+GGG | + | tig0030602:23094-23113 | Msa1443910:intron | 30.0% |
| TCCTAAAGTAGAAACAATTC+CGG | + | tig0030602:23193-23212 | Msa1443910:intron | 30.0% | |
| !! | AGTAGAATTGATTTTGTCTC+CGG | - | tig0030602:23215-23234 | None:intergenic | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | + | tig0030602:23266-23285 | Msa1443910:intron | 30.0% |
| !! | ATGTTTGTTCCACTTTTAGA+GGG | - | tig0030602:23293-23312 | None:intergenic | 30.0% |
| !! | TATGTTTGTTCCACTTTTAG+AGG | - | tig0030602:23294-23313 | None:intergenic | 30.0% |
| ACATATACTAAGCCAACATA+TGG | + | tig0030602:23309-23328 | Msa1443910:intron | 30.0% | |
| ! | GGACAAATTTTACACATGAT+TGG | + | tig0030602:23342-23361 | Msa1443910:intron | 30.0% |
| !!! | CAGCCAAAATGGTTTTAAAT+AGG | + | tig0030602:23744-23763 | Msa1443910:intron | 30.0% |
| !!! | CCAAAATGGTTTTAAATAGG+CGG | + | tig0030602:23747-23766 | Msa1443910:intron | 30.0% |
| ATAAATTTACCAGCTTAAGC+AGG | - | tig0030602:23779-23798 | None:intergenic | 30.0% | |
| TAGACCCTAGTATAACATAT+AGG | - | tig0030602:23895-23914 | None:intergenic | 30.0% | |
| CAAAATCTGCCATATAAACA+TGG | - | tig0030602:23939-23958 | None:intergenic | 30.0% | |
| ! | CATGTTTATATGGCAGATTT+TGG | + | tig0030602:23937-23956 | Msa1443910:intron | 30.0% |
| TATTGGATAGCAGAATATCA+TGG | - | tig0030602:23967-23986 | None:intergenic | 30.0% | |
| GACATCAGTGTTATCAATAT+TGG | - | tig0030602:23984-24003 | None:intergenic | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | - | tig0030602:24223-24242 | None:intergenic | 30.0% | |
| AGCATAACCCTTAAACAAAT+TGG | + | tig0030602:24278-24297 | Msa1443910:intron | 30.0% | |
| ! | TTAAGGGCCAATTTGTTTAA+GGG | - | tig0030602:24288-24307 | None:intergenic | 30.0% |
| ! | TGGGTTTTCATATTAATCAG+TGG | + | tig0030602:24406-24425 | Msa1443910:intron | 30.0% |
| ! | GGGTTTTCATATTAATCAGT+GGG | + | tig0030602:24407-24426 | Msa1443910:intron | 30.0% |
| !!! | TCTGTTGGATTCCTTTTTTA+CGG | + | tig0030602:24755-24774 | Msa1443910:intron | 30.0% |
| !!! | AAGAGCATTTCTTGTTTTTG+TGG | - | tig0030602:24979-24998 | None:intergenic | 30.0% |
| !!! | AGTTTCTCGTTAGTTTTTCT+AGG | - | tig0030602:25225-25244 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | tig0030602:25285-25304 | Msa1443910:intron | 30.0% |
| ATGTCCTATAATTGTTGAAG+TGG | + | tig0030602:25375-25394 | Msa1443910:intron | 30.0% | |
| TGTCCTATAATTGTTGAAGT+GGG | + | tig0030602:25376-25395 | Msa1443910:intron | 30.0% | |
| AACATTAGGCAAGAATATAG+AGG | + | tig0030602:25428-25447 | Msa1443910:intron | 30.0% | |
| ACATTAGGCAAGAATATAGA+GGG | + | tig0030602:25429-25448 | Msa1443910:intron | 30.0% | |
| !! | CTGATTATAATTTTGATCCC+AGG | - | tig0030602:25659-25678 | None:intergenic | 30.0% |
| GTATTACTTACACAACTTCA+CGG | - | tig0030602:25874-25893 | None:intergenic | 30.0% | |
| TATTTACGGAAGACATTGTT+GGG | - | tig0030602:25964-25983 | None:intergenic | 30.0% | |
| TTATTTACGGAAGACATTGT+TGG | - | tig0030602:25965-25984 | None:intergenic | 30.0% | |
| ATGTCTTCCGTAAATAAAAC+TGG | + | tig0030602:25968-25987 | Msa1443910:intron | 30.0% | |
| TGTCTTCCGTAAATAAAACT+GGG | + | tig0030602:25969-25988 | Msa1443910:intron | 30.0% | |
| GTAAATAAAACTGGGATAGT+AGG | + | tig0030602:25977-25996 | Msa1443910:intron | 30.0% | |
| TATATGCAAGTTAAACCATG+AGG | + | tig0030602:26282-26301 | Msa1443910:intron | 30.0% | |
| ATAAATAAAAAGAGGCCTCA+TGG | - | tig0030602:26300-26319 | None:intergenic | 30.0% | |
| AAATGACTGAGTTTGGTATT+TGG | - | tig0030602:26387-26406 | None:intergenic | 30.0% | |
| CAAATAGAAATGACTGAGTT+TGG | - | tig0030602:26394-26413 | None:intergenic | 30.0% | |
| GAAAGATCTGAAGATTGTTT+GGG | - | tig0030602:26454-26473 | None:intergenic | 30.0% | |
| AGAAAGATCTGAAGATTGTT+TGG | - | tig0030602:26455-26474 | None:intergenic | 30.0% | |
| TTACATAGCATGATAAGACT+GGG | - | tig0030602:26553-26572 | None:intergenic | 30.0% | |
| TCGTGTATATTAACAGAAAC+TGG | + | tig0030602:26609-26628 | Msa1443910:intron | 30.0% | |
| GTCTTAATCTCAATAGTCAT+TGG | + | tig0030602:27124-27143 | Msa1443910:CDS | 30.0% | |
| CATTATGCATCCTTAATTCT+TGG | - | tig0030602:27179-27198 | None:intergenic | 30.0% | |
| CTATATTTGAAGATCTGTTG+AGG | + | tig0030602:27310-27329 | Msa1443910:CDS | 30.0% | |
| CCAATAATACAACAAGATTC+AGG | - | tig0030602:27453-27472 | None:intergenic | 30.0% | |
| ! | CCTGAATCTTGTTGTATTAT+TGG | + | tig0030602:27450-27469 | Msa1443910:CDS | 30.0% |
| ACAAAAATTATCTCTCTGCT+TGG | + | tig0030602:27541-27560 | Msa1443910:CDS | 30.0% | |
| AGGCAATAAAATGTTACAGA+AGG | + | tig0030602:27817-27836 | Msa1443910:CDS | 30.0% | |
| GGCAATAAAATGTTACAGAA+GGG | + | tig0030602:27818-27837 | Msa1443910:CDS | 30.0% | |
| CAAAAAAGAGTTAGAGAGTA+TGG | + | tig0030602:27935-27954 | Msa1443910:CDS | 30.0% | |
| AAAAAGATTTGAAGAAGCAG+AGG | + | tig0030602:28028-28047 | Msa1443910:CDS | 30.0% | |
| TAAATCATTCTTTCAGGAGA+GGG | + | tig0030602:28173-28192 | Msa1443910:intron | 30.0% | |
| ACAGCAAAAAGTTTACTAAG+AGG | + | tig0030602:28198-28217 | Msa1443910:CDS | 30.0% | |
| CAGCAAAAAGTTTACTAAGA+GGG | + | tig0030602:28199-28218 | Msa1443910:CDS | 30.0% | |
| CTTCATTAGAGAAATTAGGA+AGG | - | tig0030602:28267-28286 | None:intergenic | 30.0% | |
| AGTGCTTCATTAGAGAAATT+AGG | - | tig0030602:28271-28290 | None:intergenic | 30.0% | |
| TAATTTCTCTAATGAAGCAC+TGG | + | tig0030602:28270-28289 | Msa1443910:exon | 30.0% | |
| GTCATCATAGAAGAGAATAA+AGG | - | tig0030602:28484-28503 | None:intergenic | 30.0% | |
| AGTAGAATCAAATACAAGGT+GGG | - | tig0030602:28692-28711 | None:intergenic | 30.0% | |
| AAGTAGAATCAAATACAAGG+TGG | - | tig0030602:28693-28712 | None:intergenic | 30.0% | |
| AGTAAGTTACCATTTGGAAG+AGG | - | tig0030602:22366-22385 | None:intergenic | 35.0% | |
| AATTCATCCTCTTCCATAAC+CGG | - | tig0030602:22749-22768 | None:intergenic | 35.0% | |
| !! | GAAGAGGATGAATTTGTTGA+TGG | + | tig0030602:22755-22774 | Msa1443910:CDS | 35.0% |
| CATGTTCTTCGTGATCAAAT+TGG | + | tig0030602:22836-22855 | Msa1443910:CDS | 35.0% | |
| TGATCAAATTGGGAGGAAAT+CGG | + | tig0030602:22847-22866 | Msa1443910:CDS | 35.0% | |
| !! | TACCAACAATGCTTTGAAGT+TGG | + | tig0030602:23005-23024 | Msa1443910:intron | 35.0% |
| !! | TCCGGAATTGTTTCTACTTT+AGG | - | tig0030602:23197-23216 | None:intergenic | 35.0% |
| AGAATTGATCCTAGCATGTT+TGG | - | tig0030602:23247-23266 | None:intergenic | 35.0% | |
| !! | TGTTTGTTCCACTTTTAGAG+GGG | - | tig0030602:23292-23311 | None:intergenic | 35.0% |
| !! | CCGCCTATTTAAAACCATTT+TGG | - | tig0030602:23750-23769 | None:intergenic | 35.0% |
| ! | TGTCATTGAACTTGTTCATC+AGG | - | tig0030602:23865-23884 | None:intergenic | 35.0% |
| !! | TTTATATGGCAGATTTTGGC+TGG | + | tig0030602:23941-23960 | Msa1443910:intron | 35.0% |
| !! | TAATTACTTAGGTGGACTAC+TGG | - | tig0030602:24006-24025 | None:intergenic | 35.0% |
| ! | CGAATGTTCTTGACTTTTGA+AGG | - | tig0030602:24065-24084 | None:intergenic | 35.0% |
| CAAAAGTAGTAGGTTTGCAT+TGG | - | tig0030602:24213-24232 | None:intergenic | 35.0% | |
| ! | CAATGCAAACCTACTACTTT+TGG | + | tig0030602:24211-24230 | Msa1443910:intron | 35.0% |
| ! | CTTAAGGGCCAATTTGTTTA+AGG | - | tig0030602:24289-24308 | None:intergenic | 35.0% |
| AAAAGAATCCCCTAGCTTAA+GGG | - | tig0030602:24304-24323 | None:intergenic | 35.0% | |
| AACCTTTGGTAAAGATGAGA+TGG | + | tig0030602:24593-24612 | Msa1443910:intron | 35.0% | |
| AACCATCTCATCTTTACCAA+AGG | - | tig0030602:24598-24617 | None:intergenic | 35.0% | |
| AAGATGAGATGGTTATGTGA+AGG | + | tig0030602:24604-24623 | Msa1443910:intron | 35.0% | |
| ! | TTTTGTGGGCAAGTCTATTT+TGG | + | tig0030602:24680-24699 | Msa1443910:intron | 35.0% |
| ! | TTTGTGGGCAAGTCTATTTT+GGG | + | tig0030602:24681-24700 | Msa1443910:intron | 35.0% |
| !!! | CTGTTGGATTCCTTTTTTAC+GGG | + | tig0030602:24756-24775 | Msa1443910:intron | 35.0% |
| CAGCAAAAATCCCGTAAAAA+AGG | - | tig0030602:24769-24788 | None:intergenic | 35.0% | |
| GTTGCCATTATTGACATCAT+AGG | + | tig0030602:25092-25111 | Msa1443910:intron | 35.0% | |
| TGATTGAAGCTAAAATCACG+TGG | + | tig0030602:25137-25156 | Msa1443910:intron | 35.0% | |
| ! | ATCACGTGGATTATGTAGTA+AGG | + | tig0030602:25151-25170 | Msa1443910:intron | 35.0% |
| CTAACGAGAAACTATTAGGA+AGG | + | tig0030602:25232-25251 | Msa1443910:intron | 35.0% | |
| TTTATCCTACTAAGTGAGGT+CGG | - | tig0030602:25330-25349 | None:intergenic | 35.0% | |
| ! | AAGCTTTATCCTACTAAGTG+AGG | - | tig0030602:25334-25353 | None:intergenic | 35.0% |
| TCACTTAGTAGGATAAAGCT+TGG | + | tig0030602:25333-25352 | Msa1443910:intron | 35.0% | |
| GTCCTATAATTGTTGAAGTG+GGG | + | tig0030602:25377-25396 | Msa1443910:intron | 35.0% | |
| TCCTATAATTGTTGAAGTGG+GGG | + | tig0030602:25378-25397 | Msa1443910:intron | 35.0% | |
| TCACAGAGTTAAATGGACAA+TGG | + | tig0030602:25491-25510 | Msa1443910:intron | 35.0% | |
| ! | ACATTTTACACCTCACACAA+GGG | - | tig0030602:25552-25571 | None:intergenic | 35.0% |
| ! | ATGTGTGATGCATTTTGCTA+TGG | + | tig0030602:25608-25627 | Msa1443910:intron | 35.0% |
| ! | CATGTCCTTCCTTAATTTGA+AGG | - | tig0030602:25636-25655 | None:intergenic | 35.0% |
| AGAAGAAACACCAACATTGA+AGG | - | tig0030602:25805-25824 | None:intergenic | 35.0% | |
| ATTTACGGAAGACATTGTTG+GGG | - | tig0030602:25963-25982 | None:intergenic | 35.0% | |
| AAAACTGGGATAGTAGGTAT+TGG | + | tig0030602:25983-26002 | Msa1443910:intron | 35.0% | |
| ! | GCAATTTTTCTGCTGCAAAA+AGG | - | tig0030602:26335-26354 | None:intergenic | 35.0% |
| GTTACATAGCATGATAAGAC+TGG | - | tig0030602:26554-26573 | None:intergenic | 35.0% | |
| !! | GAAGAGTTGATAGAACTTGA+CGG | + | tig0030602:26856-26875 | Msa1443910:CDS | 35.0% |
| TAAAAGTGATGCTGTGAATC+AGG | + | tig0030602:26888-26907 | Msa1443910:CDS | 35.0% | |
| AGGAATTCGTTTCATTAGAG+AGG | + | tig0030602:26908-26927 | Msa1443910:CDS | 35.0% | |
| GGAATTCGTTTCATTAGAGA+GGG | + | tig0030602:26909-26928 | Msa1443910:CDS | 35.0% | |
| ACAGAAAGGCAATGATACTT+TGG | + | tig0030602:27002-27021 | Msa1443910:CDS | 35.0% | |
| AATCTGTAAATAGCTACCCT+TGG | + | tig0030602:27043-27062 | Msa1443910:CDS | 35.0% | |
| TCTCAATAGTCATTGGATGA+AGG | + | tig0030602:27131-27150 | Msa1443910:CDS | 35.0% | |
| ATGCATCCTTAATTCTTGGT+AGG | - | tig0030602:27175-27194 | None:intergenic | 35.0% | |
| ! | GAATATCTACTCGGAACTTT+TGG | + | tig0030602:27216-27235 | Msa1443910:CDS | 35.0% |
| CAAATTCTCTCAAACTGTAC+TGG | - | tig0030602:27278-27297 | None:intergenic | 35.0% | |
| TTCCTTAGCATAGAGAACAT+TGG | - | tig0030602:27373-27392 | None:intergenic | 35.0% | |
| CTAAATCATTCTTTCAGGAG+AGG | + | tig0030602:28172-28191 | Msa1443910:intron | 35.0% | |
| AAAGTTTACTAAGAGGGATG+CGG | + | tig0030602:28205-28224 | Msa1443910:CDS | 35.0% | |
| ! | CACTGGTGCATTTTACATTT+TGG | + | tig0030602:28287-28306 | Msa1443910:three_prime_UTR | 35.0% |
| GTAAGTCCAAAGTAGTAATC+TGG | + | tig0030602:28426-28445 | Msa1443910:three_prime_UTR | 35.0% | |
| TGGAAACCAGATTACTACTT+TGG | - | tig0030602:28435-28454 | None:intergenic | 35.0% | |
| CAATGTAAAAGGGATACGAT+AGG | + | tig0030602:28535-28554 | Msa1443910:three_prime_UTR | 35.0% | |
| GGGTTTGAATAGATTGTCAT+TGG | - | tig0030602:28630-28649 | None:intergenic | 35.0% | |
| CAAGAGAAACAGAAAATCAG+GGG | - | tig0030602:28650-28669 | None:intergenic | 35.0% | |
| GCAAGAGAAACAGAAAATCA+GGG | - | tig0030602:28651-28670 | None:intergenic | 35.0% | |
| AGCAAGAGAAACAGAAAATC+AGG | - | tig0030602:28652-28671 | None:intergenic | 35.0% | |
| !! | TTCTTCTGCTTTTACAGTTC+TGG | + | tig0030602:28723-28742 | Msa1443910:three_prime_UTR | 35.0% |
| GTCTCTATTCCTCTTCCAAA+TGG | + | tig0030602:22354-22373 | Msa1443910:CDS | 40.0% | |
| TCATTCTCCTTCCTTAATGC+AGG | + | tig0030602:22564-22583 | Msa1443910:intron | 40.0% | |
| CATTCTCCTTCCTTAATGCA+GGG | + | tig0030602:22565-22584 | Msa1443910:intron | 40.0% | |
| AGTTTACTCCATCAAACACG+AGG | + | tig0030602:22627-22646 | Msa1443910:CDS | 40.0% | |
| TTGGCGTAATCTCATGTGTT+CGG | - | tig0030602:22688-22707 | None:intergenic | 40.0% | |
| TTCTTCGTGATCAAATTGGG+AGG | + | tig0030602:22840-22859 | Msa1443910:CDS | 40.0% | |
| !! | GTCCAACTTCAAAGCATTGT+TGG | - | tig0030602:23010-23029 | None:intergenic | 40.0% |
| !! | AATTTTGGCCCCTCTAAAAG+TGG | + | tig0030602:23281-23300 | Msa1443910:intron | 40.0% |
| AACCGATCGTATATTCGAAC+TGG | + | tig0030602:23394-23413 | Msa1443910:intron | 40.0% | |
| ACCGATCGTATATTCGAACT+GGG | + | tig0030602:23395-23414 | Msa1443910:intron | 40.0% | |
| ACCCAGTTCGAATATACGAT+CGG | - | tig0030602:23399-23418 | None:intergenic | 40.0% | |
| AATGAGGTGAAAAGCTCAGA+AGG | - | tig0030602:23539-23558 | None:intergenic | 40.0% | |
| TATTCACGCACAACAGTTAC+TGG | - | tig0030602:23677-23696 | None:intergenic | 40.0% | |
| ! | ACTGTTCAGGGCATTTGTTA+AGG | - | tig0030602:24240-24259 | None:intergenic | 40.0% |
| AACAAATTGGCCCTTAAGCT+AGG | + | tig0030602:24291-24310 | Msa1443910:intron | 40.0% | |
| ACAAATTGGCCCTTAAGCTA+GGG | + | tig0030602:24292-24311 | Msa1443910:intron | 40.0% | |
| CAAAAGAATCCCCTAGCTTA+AGG | - | tig0030602:24305-24324 | None:intergenic | 40.0% | |
| ! | ACTTAGATGTAGTGGCGTTT+TGG | + | tig0030602:24488-24507 | Msa1443910:intron | 40.0% |
| !! | TTTTGCTGTGTTGTCAATCC+CGG | + | tig0030602:24781-24800 | Msa1443910:intron | 40.0% |
| AAGAAATGCTCTTGTGAACG+CGG | + | tig0030602:24986-25005 | Msa1443910:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | tig0030602:25167-25186 | Msa1443910:intron | 40.0% | |
| AGTCAGATCACTAGAGGTAA+GGG | + | tig0030602:25195-25214 | Msa1443910:intron | 40.0% | |
| GGATCTAGAGATAAGTGAGT+TGG | + | tig0030602:25253-25272 | Msa1443910:intron | 40.0% | |
| ! | AAGTGAGTTGGAGAAAGACA+TGG | + | tig0030602:25265-25284 | Msa1443910:intron | 40.0% |
| ACCCCCACTTCAACAATTAT+AGG | - | tig0030602:25382-25401 | None:intergenic | 40.0% | |
| ! | GAGTTGGTCACAGAGTTAAA+TGG | + | tig0030602:25484-25503 | Msa1443910:intron | 40.0% |
| ! | CACATTTTACACCTCACACA+AGG | - | tig0030602:25553-25572 | None:intergenic | 40.0% |
| GCTATGGTGCCTTCAAATTA+AGG | + | tig0030602:25624-25643 | Msa1443910:intron | 40.0% | |
| TGGTGCCTTCAAATTAAGGA+AGG | + | tig0030602:25628-25647 | Msa1443910:intron | 40.0% | |
| AAATTAAGGAAGGACATGCC+TGG | + | tig0030602:25638-25657 | Msa1443910:intron | 40.0% | |
| AATTAAGGAAGGACATGCCT+GGG | + | tig0030602:25639-25658 | Msa1443910:intron | 40.0% | |
| !! | TTCCTCTTTTCGCTTTTCTC+CGG | - | tig0030602:26839-26858 | None:intergenic | 40.0% |
| GGTCTCATACTGAAACAGAA+AGG | + | tig0030602:26988-27007 | Msa1443910:CDS | 40.0% | |
| TAAATAGCTACCCTTGGAAC+TGG | + | tig0030602:27049-27068 | Msa1443910:CDS | 40.0% | |
| GCTATCAACTGTAGTGCATA+AGG | - | tig0030602:27097-27116 | None:intergenic | 40.0% | |
| CTCCAATGTTCTCTATGCTA+AGG | + | tig0030602:27368-27387 | Msa1443910:CDS | 40.0% | |
| ATCCGTCGTGAATACTCTAT+GGG | - | tig0030602:27421-27440 | None:intergenic | 40.0% | |
| TATCCGTCGTGAATACTCTA+TGG | - | tig0030602:27422-27441 | None:intergenic | 40.0% | |
| TACCAAGCACGATAATCACA+CGG | - | tig0030602:27648-27667 | None:intergenic | 40.0% | |
| TGTGATTATCGTGCTTGGTA+TGG | + | tig0030602:27648-27667 | Msa1443910:CDS | 40.0% | |
| TCTTGCAGCCAAATGATTCT+CGG | + | tig0030602:27739-27758 | Msa1443910:CDS | 40.0% | |
| ATCCACAACCGAGAATCATT+TGG | - | tig0030602:27750-27769 | None:intergenic | 40.0% | |
| AGAGTATGGAATCTGAAGAG+AGG | + | tig0030602:27949-27968 | Msa1443910:CDS | 40.0% | |
| GAGTATGGAATCTGAAGAGA+GGG | + | tig0030602:27950-27969 | Msa1443910:CDS | 40.0% | |
| ACACGCCTTCTTGATTATAC+TGG | + | tig0030602:28059-28078 | Msa1443910:CDS | 40.0% | |
| TAGCTTCAGACTCATGTTCT+TGG | - | tig0030602:28455-28474 | None:intergenic | 40.0% | |
| ! | TCTGTTTCTCTTGCTCAATC+TGG | + | tig0030602:28657-28676 | Msa1443910:three_prime_UTR | 40.0% |
| GTCTGTGTCAGTGTAAGAGA+GGG | - | tig0030602:22416-22435 | None:intergenic | 45.0% | |
| TGTCTGTGTCAGTGTAAGAG+AGG | - | tig0030602:22417-22436 | None:intergenic | 45.0% | |
| ATACACACGTCTTCGATCAG+AGG | + | tig0030602:22494-22513 | Msa1443910:intron | 45.0% | |
| !! | CTCTGAAACCTCGTGTTTGA+TGG | - | tig0030602:22638-22657 | None:intergenic | 45.0% |
| TCAAACACGAGGTTTCAGAG+AGG | + | tig0030602:22638-22657 | Msa1443910:CDS | 45.0% | |
| ACATACGAAACACCGGCAAT+CGG | - | tig0030602:22719-22738 | None:intergenic | 45.0% | |
| AGTAGCCACATACGAAACAC+CGG | - | tig0030602:22726-22745 | None:intergenic | 45.0% | |
| TGTTTCGTATGTGGCTACTC+CGG | + | tig0030602:22727-22746 | Msa1443910:CDS | 45.0% | |
| CGAAAGCAACCAAACATGCT+AGG | + | tig0030602:23235-23254 | Msa1443910:intron | 45.0% | |
| ! | GGGGCCAAAATTGATTCTAG+AGG | - | tig0030602:23273-23292 | None:intergenic | 45.0% |
| CCTATGTGCACACCATATGT+TGG | - | tig0030602:23324-23343 | None:intergenic | 45.0% | |
| CCAACATATGGTGTGCACAT+AGG | + | tig0030602:23321-23340 | Msa1443910:intron | 45.0% | |
| ATTCGAACTGGGTAACGAAG+TGG | + | tig0030602:23406-23425 | Msa1443910:intron | 45.0% | |
| TCAGAAGGACACTCAACCAT+AGG | - | tig0030602:23524-23543 | None:intergenic | 45.0% | |
| ! | GCCATATAAACATGGTGTCG+CGG | - | tig0030602:23931-23950 | None:intergenic | 45.0% |
| !! | AAATGCTCAAGAGTGCCCTT+AGG | + | tig0030602:24104-24123 | Msa1443910:intron | 45.0% |
| ! | TGCCCTTAGGACATTGGTTA+AGG | + | tig0030602:24117-24136 | Msa1443910:intron | 45.0% |
| ! | GCCCTTAGGACATTGGTTAA+GGG | + | tig0030602:24118-24137 | Msa1443910:intron | 45.0% |
| CCCCTTAACCAATGTCCTAA+GGG | - | tig0030602:24122-24141 | None:intergenic | 45.0% | |
| ! | CCCTTAGGACATTGGTTAAG+GGG | + | tig0030602:24119-24138 | Msa1443910:intron | 45.0% |
| TCCCCTTAACCAATGTCCTA+AGG | - | tig0030602:24123-24142 | None:intergenic | 45.0% | |
| TATGCTAACAAGTGCCCTGA+GGG | - | tig0030602:24264-24283 | None:intergenic | 45.0% | |
| TTATGCTAACAAGTGCCCTG+AGG | - | tig0030602:24265-24284 | None:intergenic | 45.0% | |
| CAAATTGGCCCTTAAGCTAG+GGG | + | tig0030602:24293-24312 | Msa1443910:intron | 45.0% | |
| CCACTACATCTAAGTCCACA+AGG | - | tig0030602:24483-24502 | None:intergenic | 45.0% | |
| CCTTGTGGACTTAGATGTAG+TGG | + | tig0030602:24480-24499 | Msa1443910:intron | 45.0% | |
| !! | TGGGCAAGTCTATTTTGGGT+TGG | + | tig0030602:24685-24704 | Msa1443910:intron | 45.0% |
| !!! | GCAAGTCTATTTTGGGTTGG+AGG | + | tig0030602:24688-24707 | Msa1443910:intron | 45.0% |
| CATAGCAACCCAGAATTGTG+TGG | - | tig0030602:25024-25043 | None:intergenic | 45.0% | |
| CACACAATTCTGGGTTGCTA+TGG | + | tig0030602:25022-25041 | Msa1443910:intron | 45.0% | |
| TGGGTTGCTATGGTGAGTTT+GGG | + | tig0030602:25032-25051 | Msa1443910:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | tig0030602:25170-25189 | Msa1443910:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | + | tig0030602:25171-25190 | Msa1443910:intron | 45.0% | |
| GAGTCAGATCACTAGAGGTA+AGG | + | tig0030602:25194-25213 | Msa1443910:intron | 45.0% | |
| CTTCATGTTTCCCTTGTGTG+AGG | + | tig0030602:25539-25558 | Msa1443910:intron | 45.0% | |
| TACTCAAAGGGGGTAACAAG+TGG | - | tig0030602:26658-26677 | None:intergenic | 45.0% | |
| ! | CCTGTAGGAAGTACAAAGCA+TGG | - | tig0030602:26816-26835 | None:intergenic | 45.0% |
| CCATGCTTTGTACTTCCTAC+AGG | + | tig0030602:26813-26832 | Msa1443910:intron | 45.0% | |
| ! | ATAGAACTTGACGGACCTCT+GGG | + | tig0030602:26865-26884 | Msa1443910:CDS | 45.0% |
| !! | ACAGCATCACTTTTACCCAG+AGG | - | tig0030602:26883-26902 | None:intergenic | 45.0% |
| TCCATGCATTCCAGTTCCAA+GGG | - | tig0030602:27062-27081 | None:intergenic | 45.0% | |
| CCTTAATTCTTGGTAGGCAC+TGG | - | tig0030602:27169-27188 | None:intergenic | 45.0% | |
| CCAGTGCCTACCAAGAATTA+AGG | + | tig0030602:27166-27185 | Msa1443910:CDS | 45.0% | |
| TCCTTACAGAGTGGAAGACT+TGG | + | tig0030602:27338-27357 | Msa1443910:CDS | 45.0% | |
| TCCAAGTCTTCCACTCTGTA+AGG | - | tig0030602:27342-27361 | None:intergenic | 45.0% | |
| TCGTGAATACTCTATGGGCA+AGG | - | tig0030602:27416-27435 | None:intergenic | 45.0% | |
| ! | TGCCCATAGAGTATTCACGA+CGG | + | tig0030602:27416-27435 | Msa1443910:CDS | 45.0% |
| TATATCAACAGCCCGACGAT+AGG | - | tig0030602:27622-27641 | None:intergenic | 45.0% | |
| ACCAAGCACGATAATCACAC+GGG | - | tig0030602:27647-27666 | None:intergenic | 45.0% | |
| TTATCGTGCTTGGTATGGAC+TGG | + | tig0030602:27653-27672 | Msa1443910:CDS | 45.0% | |
| TATCGTGCTTGGTATGGACT+GGG | + | tig0030602:27654-27673 | Msa1443910:CDS | 45.0% | |
| AGCCAAATGATTCTCGGTTG+TGG | + | tig0030602:27745-27764 | Msa1443910:CDS | 45.0% | |
| TTCTCGGTTGTGGATAGCTA+TGG | + | tig0030602:27755-27774 | Msa1443910:CDS | 45.0% | |
| AGTAAAACGCTGCCTCTTCA+GGG | - | tig0030602:27914-27933 | None:intergenic | 45.0% | |
| TAGTAAAACGCTGCCTCTTC+AGG | - | tig0030602:27915-27934 | None:intergenic | 45.0% | |
| ATGGAATCTGAAGAGAGGGA+CGG | + | tig0030602:27954-27973 | Msa1443910:CDS | 45.0% | |
| CTGGGCCAGTATAATCAAGA+AGG | - | tig0030602:28067-28086 | None:intergenic | 45.0% | |
| TTGTGCTGCGTCAGAACTAA+TGG | + | tig0030602:28330-28349 | Msa1443910:three_prime_UTR | 45.0% | |
| TCTCTTGCTCAATCTGGTGA+AGG | + | tig0030602:28663-28682 | Msa1443910:three_prime_UTR | 45.0% | |
| !!! | TTAAAATAGAAATTTTATAT+TGG | + | tig0030602:26132-26151 | Msa1443910:intron | 5.0% |
| !! | TAACATTTAAATAAATATAA+TGG | + | tig0030602:26676-26695 | Msa1443910:intron | 5.0% |
| ! | CCAACAACAACACCGATTGC+CGG | + | tig0030602:22704-22723 | Msa1443910:CDS | 50.0% |
| GATTGCCGGTGTTTCGTATG+TGG | + | tig0030602:22718-22737 | Msa1443910:CDS | 50.0% | |
| GTATGTGGCTACTCCGGTTA+TGG | + | tig0030602:22733-22752 | Msa1443910:CDS | 50.0% | |
| CGGTTAGAACCTGCTTAAGC+TGG | + | tig0030602:23767-23786 | Msa1443910:intron | 50.0% | |
| ATACTAGGGTCTAGCACACG+TGG | + | tig0030602:23902-23921 | Msa1443910:intron | 50.0% | |
| TACTAGGGTCTAGCACACGT+GGG | + | tig0030602:23903-23922 | Msa1443910:intron | 50.0% | |
| GCCGCGACACCATGTTTATA+TGG | + | tig0030602:23927-23946 | Msa1443910:intron | 50.0% | |
| !! | CAAGAGTGCCCTTAGGACAT+TGG | + | tig0030602:24111-24130 | Msa1443910:intron | 50.0% |
| !!! | AGTGGCGTTTTGGAGAGCTT+AGG | + | tig0030602:24498-24517 | Msa1443910:intron | 50.0% |
| ! | GGTGTGTACGTTGTGCTGAT+GGG | + | tig0030602:24543-24562 | Msa1443910:intron | 50.0% |
| TTATGTGAAGGTAGCGCCAG+CGG | + | tig0030602:24616-24635 | Msa1443910:intron | 50.0% | |
| ! | TCATGTTTCTAACCCTCCGC+TGG | - | tig0030602:24635-24654 | None:intergenic | 50.0% |
| AACCCCAAAACTGGGATAGC+AGG | + | tig0030602:24818-24837 | Msa1443910:intron | 50.0% | |
| ACCCCAAAACTGGGATAGCA+GGG | + | tig0030602:24819-24838 | Msa1443910:intron | 50.0% | |
| ! | ACCCTGCTATCCCAGTTTTG+GGG | - | tig0030602:24823-24842 | None:intergenic | 50.0% |
| ! | CACCCTGCTATCCCAGTTTT+GGG | - | tig0030602:24824-24843 | None:intergenic | 50.0% |
| ! | ACACCCTGCTATCCCAGTTT+TGG | - | tig0030602:24825-24844 | None:intergenic | 50.0% |
| CTGGGTTGCTATGGTGAGTT+TGG | + | tig0030602:25031-25050 | Msa1443910:intron | 50.0% | |
| GGGTTGCTATGGTGAGTTTG+GGG | + | tig0030602:25033-25052 | Msa1443910:intron | 50.0% | |
| GGTTGCTATGGTGAGTTTGG+GGG | + | tig0030602:25034-25053 | Msa1443910:intron | 50.0% | |
| GGAGAGTAGATCAGATGGAG+GGG | + | tig0030602:25172-25191 | Msa1443910:intron | 50.0% | |
| TGTAGCCGACCTCACTTAGT+AGG | + | tig0030602:25322-25341 | Msa1443910:intron | 50.0% | |
| CTGGCTGTTGCCTTCAATGT+TGG | + | tig0030602:25792-25811 | Msa1443910:intron | 50.0% | |
| AAAGGGGGTAACAAGTGGCA+TGG | - | tig0030602:26653-26672 | None:intergenic | 50.0% | |
| GCTTTGTACTTCCTACAGGC+CGG | + | tig0030602:26817-26836 | Msa1443910:intron | 50.0% | |
| ! | GATAGAACTTGACGGACCTC+TGG | + | tig0030602:26864-26883 | Msa1443910:CDS | 50.0% |
| TTTGGCACGCACAGTTCTTG+TGG | + | tig0030602:27020-27039 | Msa1443910:CDS | 50.0% | |
| ACCCTTGGAACTGGAATGCA+TGG | + | tig0030602:27058-27077 | Msa1443910:CDS | 50.0% | |
| GTCCATGCATTCCAGTTCCA+AGG | - | tig0030602:27063-27082 | None:intergenic | 50.0% | |
| GAGGACTGATCCTTACAGAG+TGG | + | tig0030602:27329-27348 | Msa1443910:CDS | 50.0% | |
| TCTCTCTGCTTGGACACTCA+TGG | + | tig0030602:27551-27570 | Msa1443910:CDS | 50.0% | |
| CTCTCTGCTTGGACACTCAT+GGG | + | tig0030602:27552-27571 | Msa1443910:CDS | 50.0% | |
| GAAAAATACTCCTGCCGCTG+TGG | + | tig0030602:27593-27612 | Msa1443910:CDS | 50.0% | |
| ACCCGTGTGATTATCGTGCT+TGG | + | tig0030602:27643-27662 | Msa1443910:CDS | 50.0% | |
| CTGAATGCAGCTTCGCTAGT+TGG | - | tig0030602:27881-27900 | None:intergenic | 50.0% | |
| AGCAAACCCTCAACCATGTG+AGG | - | tig0030602:27981-28000 | None:intergenic | 50.0% | |
| CTGCTGCCCTGCATTAAGGA+AGG | - | tig0030602:22574-22593 | None:intergenic | 55.0% | |
| TGCTCTGCTGCCCTGCATTA+AGG | - | tig0030602:22578-22597 | None:intergenic | 55.0% | |
| ATGCAGGGCAGCAGAGCAAT+TGG | + | tig0030602:22580-22599 | Msa1443910:intron | 55.0% | |
| AGGGCAGCAGAGCAATTGGT+AGG | + | tig0030602:22584-22603 | Msa1443910:intron | 55.0% | |
| !! | CCGGCAATCGGTGTTGTTGT+TGG | - | tig0030602:22707-22726 | None:intergenic | 55.0% |
| GGCTACTCCGGTTATGGAAG+AGG | + | tig0030602:22739-22758 | Msa1443910:CDS | 55.0% | |
| GGGTGTGTACGTTGTGCTGA+TGG | + | tig0030602:24542-24561 | Msa1443910:intron | 55.0% | |
| GTCAATCCCGGATAGCAGAG+CGG | + | tig0030602:24793-24812 | Msa1443910:intron | 55.0% | |
| AGAGCGGTCAACCCCAAAAC+TGG | + | tig0030602:24809-24828 | Msa1443910:intron | 55.0% | |
| GAGCGGTCAACCCCAAAACT+GGG | + | tig0030602:24810-24829 | Msa1443910:intron | 55.0% | |
| ACTGGGATAGCAGGGTGTGA+TGG | + | tig0030602:24827-24846 | Msa1443910:intron | 55.0% | |
| TCTTGTGAACGCGGCCATGA+CGG | + | tig0030602:24995-25014 | Msa1443910:intron | 55.0% | |
| GAATTGTGTGGCGACCGTCA+TGG | - | tig0030602:25012-25031 | None:intergenic | 55.0% | |
| TGACGGTCGCCACACAATTC+TGG | + | tig0030602:25012-25031 | Msa1443910:intron | 55.0% | |
| GACGGTCGCCACACAATTCT+GGG | + | tig0030602:25013-25032 | Msa1443910:intron | 55.0% | |
| TGCTATGGTGAGTTTGGGGG+CGG | + | tig0030602:25037-25056 | Msa1443910:intron | 55.0% | |
| ACAACACGCTGCCGCTCTAA+CGG | + | tig0030602:25064-25083 | Msa1443910:intron | 55.0% | |
| GAGGGGAGTCAGATCACTAG+AGG | + | tig0030602:25189-25208 | Msa1443910:intron | 55.0% | |
| !! | TTCGCTTTTCTCCGGCCTGT+AGG | - | tig0030602:26831-26850 | None:intergenic | 55.0% |
| GGCCGGAGAAAAGCGAAAAG+AGG | + | tig0030602:26834-26853 | Msa1443910:intron | 55.0% | |
| CCTTATCGAGCATGCGAAGC+TGG | - | tig0030602:27800-27819 | None:intergenic | 55.0% | |
| CCAGCTTCGCATGCTCGATA+AGG | + | tig0030602:27797-27816 | Msa1443910:CDS | 55.0% | |
| GCGAAGCTGCATTCAGAGCT+CGG | + | tig0030602:27885-27904 | Msa1443910:CDS | 55.0% | |
| GACGGACCTCACATGGTTGA+GGG | + | tig0030602:27972-27991 | Msa1443910:CDS | 55.0% | |
| ATGCCCTGAACAGTGCCCTC+AGG | + | tig0030602:24246-24265 | Msa1443910:intron | 60.0% | |
| TGCCCTGAACAGTGCCCTCA+GGG | + | tig0030602:24247-24266 | Msa1443910:intron | 60.0% | |
| !! | TGCCCTGAGGGCACTGTTCA+GGG | - | tig0030602:24252-24271 | None:intergenic | 60.0% |
| GGTTGACCGCTCTGCTATCC+GGG | - | tig0030602:24802-24821 | None:intergenic | 60.0% | |
| GGGTTGACCGCTCTGCTATC+CGG | - | tig0030602:24803-24822 | None:intergenic | 60.0% | |
| GGCAACTAGCGCCGTTAGAG+CGG | - | tig0030602:25078-25097 | None:intergenic | 60.0% | |
| CCGACGATAGGCATCCACAG+CGG | - | tig0030602:27610-27629 | None:intergenic | 60.0% | |
| CCGCTGTGGATGCCTATCGT+CGG | + | tig0030602:27607-27626 | Msa1443910:CDS | 60.0% | |
| CGCTGTGGATGCCTATCGTC+GGG | + | tig0030602:27608-27627 | Msa1443910:CDS | 60.0% | |
| AGAGAGGGACGGACCTCACA+TGG | + | tig0030602:27965-27984 | Msa1443910:CDS | 60.0% | |
| GGACGGACCTCACATGGTTG+AGG | + | tig0030602:27971-27990 | Msa1443910:CDS | 60.0% | |
| !! | GTGCCCTGAGGGCACTGTTC+AGG | - | tig0030602:24253-24272 | None:intergenic | 65.0% |
| TGTGAAGGTAGCGCCAGCGG+AGG | + | tig0030602:24619-24638 | Msa1443910:intron | 65.0% | |
| GTGAAGGTAGCGCCAGCGGA+GGG | + | tig0030602:24620-24639 | Msa1443910:intron | 65.0% | |
| CGATAGGCATCCACAGCGGC+AGG | - | tig0030602:27606-27625 | None:intergenic | 65.0% | |
| AGAGCTCGGACGCCCTGAAG+AGG | + | tig0030602:27899-27918 | Msa1443910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030602 | gene | 22260 | 28754 | 22260 | ID=Msa1443910;Name=Msa1443910 |
| tig0030602 | mRNA | 22260 | 28754 | 22260 | ID=Msa1443910-mRNA-1;Parent=Msa1443910;Name=Msa1443910-mRNA-1;_AED=0.01;_eAED=0.01;_QI=30|1|1|1|1|1|4|482|577 |
| tig0030602 | exon | 22260 | 22375 | 22260 | ID=Msa1443910-mRNA-1:exon:14170;Parent=Msa1443910-mRNA-1 |
| tig0030602 | exon | 22586 | 22898 | 22586 | ID=Msa1443910-mRNA-1:exon:14171;Parent=Msa1443910-mRNA-1 |
| tig0030602 | exon | 26835 | 28085 | 26835 | ID=Msa1443910-mRNA-1:exon:14172;Parent=Msa1443910-mRNA-1 |
| tig0030602 | exon | 28189 | 28754 | 28189 | ID=Msa1443910-mRNA-1:exon:14173;Parent=Msa1443910-mRNA-1 |
| tig0030602 | five_prime_UTR | 22260 | 22289 | 22260 | ID=Msa1443910-mRNA-1:five_prime_utr;Parent=Msa1443910-mRNA-1 |
| tig0030602 | CDS | 22290 | 22375 | 22290 | ID=Msa1443910-mRNA-1:cds;Parent=Msa1443910-mRNA-1 |
| tig0030602 | CDS | 22586 | 22898 | 22586 | ID=Msa1443910-mRNA-1:cds;Parent=Msa1443910-mRNA-1 |
| tig0030602 | CDS | 26835 | 28085 | 26835 | ID=Msa1443910-mRNA-1:cds;Parent=Msa1443910-mRNA-1 |
| tig0030602 | CDS | 28189 | 28272 | 28189 | ID=Msa1443910-mRNA-1:cds;Parent=Msa1443910-mRNA-1 |
| tig0030602 | three_prime_UTR | 28273 | 28754 | 28273 | ID=Msa1443910-mRNA-1:three_prime_utr;Parent=Msa1443910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
