Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174970 | XP_003627412.3 | 94.801 | 577 | 18 | 2 | 1 | 565 | 242 | 818 | 0.0 | 1134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174970 | sp|Q94A27|SAC2_ARATH | 50.000 | 602 | 227 | 12 | 1 | 557 | 228 | 800 | 4.65e-174 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1174970 | Msa1234670 | 0.926202 | 6.479950e-91 | -8.615850e-47 |
| Msa1174970 | Msa1276940 | 0.930493 | 1.511429e-93 | -8.615850e-47 |
| Msa1174970 | Msa1315350 | 0.892359 | 1.706797e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174970 | MtrunA17_Chr8g0344911 | 94.627 | 577 | 18 | 3 | 1 | 565 | 242 | 817 | 0.0 | 1127 |
| Msa1174970 | MtrunA17_Chr4g0069981 | 53.008 | 615 | 222 | 15 | 3 | 563 | 236 | 837 | 0.0 | 575 |
| Msa1174970 | MtrunA17_Chr4g0014511 | 42.683 | 574 | 254 | 15 | 3 | 519 | 253 | 808 | 1.20e-127 | 396 |
| Msa1174970 | MtrunA17_Chr5g0406801 | 35.115 | 131 | 76 | 3 | 249 | 373 | 389 | 516 | 1.95e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174970 | AT3G14205.2 | 50.000 | 602 | 227 | 12 | 1 | 557 | 53 | 625 | 3.36e-177 | 515 |
| Msa1174970 | AT3G14205.1 | 50.000 | 602 | 227 | 12 | 1 | 557 | 228 | 800 | 4.73e-175 | 515 |
| Msa1174970 | AT5G20840.1 | 48.852 | 610 | 249 | 14 | 3 | 563 | 234 | 829 | 8.23e-170 | 503 |
| Msa1174970 | AT3G43220.1 | 47.587 | 601 | 270 | 12 | 1 | 563 | 223 | 816 | 1.49e-158 | 473 |
| Msa1174970 | AT3G43220.3 | 47.185 | 604 | 263 | 12 | 1 | 563 | 223 | 811 | 3.64e-157 | 469 |
| Msa1174970 | AT3G43220.2 | 56.876 | 429 | 167 | 6 | 1 | 416 | 223 | 646 | 7.93e-147 | 440 |
| Msa1174970 | AT1G22620.1 | 51.179 | 424 | 169 | 10 | 1 | 398 | 243 | 654 | 1.25e-129 | 401 |
| Msa1174970 | AT1G17340.1 | 48.364 | 428 | 182 | 9 | 4 | 417 | 231 | 633 | 1.17e-115 | 361 |
| Msa1174970 | AT5G66020.1 | 37.086 | 151 | 68 | 7 | 11 | 151 | 212 | 345 | 8.85e-13 | 71.6 |
| Msa1174970 | AT5G66020.1 | 34.959 | 123 | 75 | 3 | 249 | 367 | 386 | 507 | 2.60e-11 | 66.6 |
Find 149 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTCCATCTGCTAAATT+TGG | 0.146934 | 8_1:+6206435 | None:intergenic |
| ATACTGAAAGCTTTGAAAAT+TGG | 0.147538 | 8_1:-6202031 | Msa1174970:CDS |
| ATCAAGTTCAGTATAATAAT+TGG | 0.185083 | 8_1:+6208536 | None:intergenic |
| GACACATTAGCCTTTCAATA+TGG | 0.211695 | 8_1:-6207532 | Msa1174970:CDS |
| TCCAAAAGAGATTGCTTATC+AGG | 0.251218 | 8_1:+6205756 | None:intergenic |
| TCCTGATAAGCAATCTCTTT+TGG | 0.253320 | 8_1:-6205757 | Msa1174970:CDS |
| ACTTACTCAGAAAAGGAATA+TGG | 0.268444 | 8_1:+6208065 | None:intergenic |
| TACTGAAAGCTTTGAAAATT+GGG | 0.269078 | 8_1:-6202030 | Msa1174970:CDS |
| CCAGTCCACATCAAGGAAAT+TGG | 0.290418 | 8_1:+6205477 | None:intergenic |
| TATTATACTGAACTTGATTA+AGG | 0.305053 | 8_1:-6208531 | Msa1174970:intron |
| GAGAATCTTGTCATGAGATA+TGG | 0.308963 | 8_1:-6208563 | Msa1174970:CDS |
| TTGGACCATGACTTCCAAAA+AGG | 0.315276 | 8_1:+6206454 | None:intergenic |
| AGGCGCTCACGGCACTATGC+TGG | 0.316310 | 8_1:-6209534 | Msa1174970:CDS |
| CACCAATGTGCTTTCACAAC+TGG | 0.330680 | 8_1:-6208171 | Msa1174970:CDS |
| GGGGTTCAATCCCTCTCTTT+TGG | 0.336187 | 8_1:-6209088 | Msa1174970:CDS |
| GGACGCCAGCTACATGCATT+TGG | 0.338791 | 8_1:-6207631 | Msa1174970:CDS |
| TAGGTTAACCTTTCTATATC+TGG | 0.339638 | 8_1:-6209585 | Msa1174970:CDS |
| TGCTTGATACTGTACCTAAT+TGG | 0.339740 | 8_1:+6201751 | None:intergenic |
| CTTTGCTGTACAGAAATAAA+TGG | 0.340460 | 8_1:-6201920 | Msa1174970:three_prime_UTR |
| GCTGATAAGGAAACAGAAAA+TGG | 0.350899 | 8_1:-6207799 | Msa1174970:CDS |
| TCAGTTCTGTGGTGCAGATC+CGG | 0.364139 | 8_1:-6209109 | Msa1174970:CDS |
| TGAATCTGGACCTATCTTAA+AGG | 0.365639 | 8_1:-6203774 | Msa1174970:intron |
| GAGGTGCCGGCAAGTGAATC+TGG | 0.372008 | 8_1:-6203788 | Msa1174970:CDS |
| CCAATTTCCTTGATGTGGAC+TGG | 0.383314 | 8_1:-6205477 | Msa1174970:CDS |
| ATTGTCTGAGGTATCTTCAT+TGG | 0.388186 | 8_1:-6208311 | Msa1174970:CDS |
| GGGGCATTTCCAGCCACAAC+AGG | 0.392246 | 8_1:-6206517 | Msa1174970:CDS |
| GACGCCAGCTACATGCATTT+GGG | 0.393314 | 8_1:-6207630 | Msa1174970:CDS |
| ACACATTAGCCTTTCAATAT+GGG | 0.394386 | 8_1:-6207531 | Msa1174970:CDS |
| CCACAGAACTGATTTGCATT+GGG | 0.409148 | 8_1:+6209120 | None:intergenic |
| TCAAGTTCAGTATAATAATT+GGG | 0.410610 | 8_1:+6208537 | None:intergenic |
| GGACTCATGTTTGGTGTCAC+TGG | 0.418382 | 8_1:+6208101 | None:intergenic |
| CAGTTCTGTGGTGCAGATCC+GGG | 0.421189 | 8_1:-6209108 | Msa1174970:CDS |
| AATCCCTCTGGACTCATGTT+TGG | 0.422679 | 8_1:+6208092 | None:intergenic |
| TATTAATAAAACTTTGAGTA+AGG | 0.424613 | 8_1:-6208337 | Msa1174970:CDS |
| AATTTAGCAGATGGAATTGA+TGG | 0.425095 | 8_1:-6206432 | Msa1174970:CDS |
| TCAGATGAGTACGGACAGTC+TGG | 0.425148 | 8_1:+6205783 | None:intergenic |
| ATGTCAGGTTTCATATTCAA+TGG | 0.429541 | 8_1:+6209050 | None:intergenic |
| ATAGGTCCAGATTCACTTGC+CGG | 0.430491 | 8_1:+6203782 | None:intergenic |
| TTTAAACCTTAGTTTGGGTC+TGG | 0.436286 | 8_1:-6201655 | Msa1174970:three_prime_UTR |
| TTATTACAACAATACATATA+CGG | 0.440751 | 8_1:-6206721 | Msa1174970:CDS |
| TTGTCTGAGGTATCTTCATT+GGG | 0.447194 | 8_1:-6208310 | Msa1174970:CDS |
| GAATCAAGCTTCCACAGTAC+TGG | 0.448668 | 8_1:+6206489 | None:intergenic |
| AATGTTGCACAGTATGCTTA+TGG | 0.455792 | 8_1:-6207667 | Msa1174970:intron |
| TATTAAACTTGGCAACCCTT+TGG | 0.458278 | 8_1:-6207590 | Msa1174970:CDS |
| CTTACTCAGAAAAGGAATAT+GGG | 0.464241 | 8_1:+6208066 | None:intergenic |
| AATGAAAGTTTATGAGTCCA+TGG | 0.465884 | 8_1:-6207557 | Msa1174970:CDS |
| GATATAGGTCAGGAGACATT+AGG | 0.466832 | 8_1:+6201971 | None:intergenic |
| CAATCCGATGGCAATATTCT+CGG | 0.471072 | 8_1:-6205840 | Msa1174970:CDS |
| TTATGGTACTTACTCAGAAA+AGG | 0.471405 | 8_1:+6208058 | None:intergenic |
| CAGGCAAGTTTATGCAGGAA+TGG | 0.478598 | 8_1:-6205566 | Msa1174970:CDS |
| AGTCATGAATTCTCATCCTT+CGG | 0.480296 | 8_1:+6201941 | None:intergenic |
| TTTCTAGAAGTAGAGGTCAA+TGG | 0.482402 | 8_1:-6206788 | Msa1174970:CDS |
| TATTGTTGTAATAACGCTGT+AGG | 0.483851 | 8_1:+6206730 | None:intergenic |
| ATTAATAGACTTAACAGCAT+TGG | 0.484492 | 8_1:+6208353 | None:intergenic |
| GTAGGGTTCGAATAAGCTCT+TGG | 0.486430 | 8_1:+6206748 | None:intergenic |
| GAATCCCCACATATTAAACT+TGG | 0.486919 | 8_1:-6207601 | Msa1174970:CDS |
| TTCATTAAATCCTTTGCCAA+AGG | 0.487276 | 8_1:+6207574 | None:intergenic |
| ATCTTCATTGGGATCTGACT+TGG | 0.488595 | 8_1:-6208299 | Msa1174970:CDS |
| ACCAATGTGCTTTCACAACT+GGG | 0.489522 | 8_1:-6208170 | Msa1174970:CDS |
| ACCACAGAACTGATTTGCAT+TGG | 0.490668 | 8_1:+6209119 | None:intergenic |
| AAAGCCAAGACGGTTCAATC+AGG | 0.493324 | 8_1:-6207730 | Msa1174970:CDS |
| AATTAAATTATATACATGAA+TGG | 0.495549 | 8_1:+6201717 | None:intergenic |
| TCATTAAATCCTTTGCCAAA+GGG | 0.496371 | 8_1:+6207575 | None:intergenic |
| CTTAACAGCATTGGCGAACT+CGG | 0.498542 | 8_1:+6208362 | None:intergenic |
| CGGATAAGTTGATATAGGTC+AGG | 0.499063 | 8_1:+6201961 | None:intergenic |
| TTTGAAAATTGGGTTACTCA+TGG | 0.502111 | 8_1:-6202020 | Msa1174970:CDS |
| TATATACTGACCTTTAAGAT+AGG | 0.502188 | 8_1:+6203764 | None:intergenic |
| AGGCAAGTTTATGCAGGAAT+GGG | 0.504128 | 8_1:-6205565 | Msa1174970:CDS |
| GAAACGAGGAGTCAATGAAA+GGG | 0.506357 | 8_1:-6209204 | Msa1174970:CDS |
| TATATCGTACATATAATGTC+AGG | 0.506653 | 8_1:+6209035 | None:intergenic |
| CACATTAGCCTTTCAATATG+GGG | 0.510110 | 8_1:-6207530 | Msa1174970:CDS |
| GAATATGGGAATAATCCCTC+TGG | 0.512618 | 8_1:+6208080 | None:intergenic |
| GCTTATGGACTCGTCGCACT+AGG | 0.517099 | 8_1:-6207652 | Msa1174970:CDS |
| CTGCTCCAATTTCCTTGATG+TGG | 0.517591 | 8_1:-6205482 | Msa1174970:CDS |
| TAGGGTTCGAATAAGCTCTT+GGG | 0.519595 | 8_1:+6206749 | None:intergenic |
| CCACAAGTAGACTTCAATAG+AGG | 0.523606 | 8_1:+6205732 | None:intergenic |
| TAATAAAACTTTGAGTAAGG+AGG | 0.524239 | 8_1:-6208334 | Msa1174970:CDS |
| TAAACCCAAATGCATGTAGC+TGG | 0.525363 | 8_1:+6207626 | None:intergenic |
| GGGTTGCCAAGTTTAATATG+TGG | 0.528032 | 8_1:+6207595 | None:intergenic |
| TACAACAATACATATACGGA+CGG | 0.528782 | 8_1:-6206717 | Msa1174970:CDS |
| ACTTGGCAACCCTTTGGCAA+AGG | 0.532622 | 8_1:-6207584 | Msa1174970:CDS |
| CAGTTGTGAAAGCACATTGG+TGG | 0.534453 | 8_1:+6208172 | None:intergenic |
| TTCATTCACAATATTGTCTG+AGG | 0.534573 | 8_1:+6203820 | None:intergenic |
| TTATACAGGCAAGTTTATGC+AGG | 0.534777 | 8_1:-6205571 | Msa1174970:intron |
| TCCTTCGGATAAGTTGATAT+AGG | 0.535865 | 8_1:+6201956 | None:intergenic |
| CGACCGCCAGACCCAAACTA+AGG | 0.536113 | 8_1:+6201649 | None:intergenic |
| GTGAAGAAGAACTACTTGAC+AGG | 0.539008 | 8_1:-6205432 | Msa1174970:intron |
| TGAACTAATAACTGAGGTGC+CGG | 0.541042 | 8_1:-6203801 | Msa1174970:CDS |
| CATGGTCCAAATTTAGCAGA+TGG | 0.542233 | 8_1:-6206441 | Msa1174970:CDS |
| GGTTGCCAAGTTTAATATGT+GGG | 0.543042 | 8_1:+6207596 | None:intergenic |
| TTGATACTGTACCTAATTGG+AGG | 0.553057 | 8_1:+6201754 | None:intergenic |
| GTCTTTGCAGATGCTAGTGA+TGG | 0.554035 | 8_1:-6209146 | Msa1174970:CDS |
| TTGACTTGATTACCATTGCT+AGG | 0.555440 | 8_1:-6209554 | Msa1174970:CDS |
| TGAAACGAGGAGTCAATGAA+AGG | 0.555782 | 8_1:-6209205 | Msa1174970:CDS |
| ATGAAAGTTTATGAGTCCAT+GGG | 0.555783 | 8_1:-6207556 | Msa1174970:CDS |
| GCTTTCACAACTGGGAAAAG+TGG | 0.557872 | 8_1:-6208162 | Msa1174970:CDS |
| GATGAATTTCTTGTTGAGCA+AGG | 0.559740 | 8_1:-6207841 | Msa1174970:CDS |
| ATTCTCAAAATGAAGTCTTG+TGG | 0.560519 | 8_1:+6208580 | None:intergenic |
| ACTTGCGGCCAGATATAGAA+AGG | 0.562076 | 8_1:+6209577 | None:intergenic |
| ATTGTTGTAATAACGCTGTA+GGG | 0.562688 | 8_1:+6206731 | None:intergenic |
| GAACTTCTATCTGTCAATGC+AGG | 0.564220 | 8_1:-6205710 | Msa1174970:intron |
| AAAGGCTAATGTGTCGCCCA+TGG | 0.569063 | 8_1:+6207540 | None:intergenic |
| ACCTATATCAACTTATCCGA+AGG | 0.575997 | 8_1:-6201957 | Msa1174970:three_prime_UTR |
| GTGCCGTGAGCGCCTAGCAA+TGG | 0.576081 | 8_1:+6209542 | None:intergenic |
| AGGTTTCATATTCAATGGAG+AGG | 0.578082 | 8_1:+6209055 | None:intergenic |
| ACAACAATACATATACGGAC+GGG | 0.579913 | 8_1:-6206716 | Msa1174970:CDS |
| AAGAAAGCCAGTCCACATCA+AGG | 0.580107 | 8_1:+6205470 | None:intergenic |
| AAACCTTAGTTTGGGTCTGG+CGG | 0.582020 | 8_1:-6201652 | None:intergenic |
| ATCTGACTTGGCATTCGAGA+CGG | 0.583512 | 8_1:-6208287 | Msa1174970:intron |
| CGGTTCAATCAGGCGTCTTG+AGG | 0.583992 | 8_1:-6207720 | Msa1174970:CDS |
| TTCACCGAGAATATTGCCAT+CGG | 0.585090 | 8_1:+6205836 | None:intergenic |
| ATTAACAACTTTCAGCAGCA+AGG | 0.585777 | 8_1:-6208195 | Msa1174970:intron |
| CACAGAACTGATTTGCATTG+GGG | 0.592102 | 8_1:+6209121 | None:intergenic |
| GATACAAAAGCAAATAGCAG+TGG | 0.605071 | 8_1:-6201889 | Msa1174970:three_prime_UTR |
| ATGTTCGCGTTGAATCTGAC+TGG | 0.605772 | 8_1:-6208137 | Msa1174970:CDS |
| GTTGCCAAGTTTAATATGTG+GGG | 0.606826 | 8_1:+6207597 | None:intergenic |
| ATTTAGCAGATGGAATTGAT+GGG | 0.608558 | 8_1:-6206431 | Msa1174970:intron |
| CCTCTATTGAAGTCTACTTG+TGG | 0.609343 | 8_1:-6205732 | Msa1174970:CDS |
| TAGAGGTCAATGGAAGGCAG+CGG | 0.610698 | 8_1:-6206778 | Msa1174970:CDS |
| CCCAATGCAAATCAGTTCTG+TGG | 0.613475 | 8_1:-6209120 | Msa1174970:CDS |
| AAGCAAATAGCAGTGGCAGA+AGG | 0.616665 | 8_1:-6201882 | Msa1174970:three_prime_UTR |
| ACATTAGCCTTTCAATATGG+GGG | 0.616794 | 8_1:-6207529 | Msa1174970:CDS |
| AAAAGAGAGGGATTGAACCC+CGG | 0.619852 | 8_1:+6209090 | None:intergenic |
| AAGGAAACAGAAAATGGCAA+TGG | 0.620301 | 8_1:-6207793 | Msa1174970:CDS |
| TCCCAGTTGTGAAAGCACAT+TGG | 0.620901 | 8_1:+6208169 | None:intergenic |
| AGTTTATGCAGGAATGGGCA+AGG | 0.620967 | 8_1:-6205560 | Msa1174970:CDS |
| AGTTCTGTGGTGCAGATCCG+GGG | 0.622116 | 8_1:-6209107 | Msa1174970:CDS |
| AATGGTTATTACAGTGGTGA+TGG | 0.624797 | 8_1:-6207775 | Msa1174970:CDS |
| GTGAAAGTGACTCTACAACT+AGG | 0.625184 | 8_1:-6205818 | Msa1174970:CDS |
| CTTCCTGAGACCAAAAGAGA+GGG | 0.626552 | 8_1:+6209078 | None:intergenic |
| TAGAAGTAGAGGTCAATGGA+AGG | 0.628077 | 8_1:-6206784 | Msa1174970:CDS |
| GCTTCCTGAGACCAAAAGAG+AGG | 0.637321 | 8_1:+6209077 | None:intergenic |
| ACACCAAACATGAGTCCAGA+GGG | 0.639541 | 8_1:-6208095 | Msa1174970:CDS |
| TGGTGCAGGTATTTGAAACG+AGG | 0.645473 | 8_1:-6209218 | Msa1174970:intron |
| AATGGCAATGGTTATTACAG+TGG | 0.647267 | 8_1:-6207781 | Msa1174970:CDS |
| ATTAGAAGATCACAATCCGA+TGG | 0.647469 | 8_1:-6205852 | Msa1174970:CDS |
| GGGTTCTGCAGCGCACAACA+AGG | 0.652377 | 8_1:-6207509 | Msa1174970:intron |
| GGGCATTTCCAGCCACAACA+GGG | 0.658755 | 8_1:-6206516 | Msa1174970:CDS |
| TGATACTGTACCTAATTGGA+GGG | 0.661319 | 8_1:+6201755 | None:intergenic |
| TGGTAATCAAGTCAAACTTG+CGG | 0.663201 | 8_1:+6209562 | None:intergenic |
| AACAGGGAAAACCAGTACTG+TGG | 0.673122 | 8_1:-6206500 | Msa1174970:CDS |
| AAACGAGGAGTCAATGAAAG+GGG | 0.678363 | 8_1:-6209203 | Msa1174970:CDS |
| TGAGTAAGGAGGATTGTCTG+AGG | 0.680809 | 8_1:-6208323 | Msa1174970:CDS |
| TACTGTACCTAATTGGAGGG+AGG | 0.692947 | 8_1:+6201758 | None:intergenic |
| TTACAGTGTCAAAGCCAAGA+CGG | 0.700662 | 8_1:-6207740 | Msa1174970:CDS |
| GACACCAAACATGAGTCCAG+AGG | 0.705411 | 8_1:-6208096 | Msa1174970:CDS |
| CATACTGTGCAACATTGGTG+CGG | 0.714917 | 8_1:+6207674 | None:intergenic |
| GTTCGCAGAATAGTTTCACG+CGG | 0.715239 | 8_1:+6208384 | None:intergenic |
| TGTGAATGAACTAATAACTG+AGG | 0.731433 | 8_1:-6203807 | Msa1174970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATAAAAGAATATAAA+AGG | + | chr8_1:6202808-6202827 | None:intergenic | 10.0% |
| !!! | TGTTTTGATTATAAATAAAA+AGG | - | chr8_1:6208280-6208299 | Msa1174970:intron | 10.0% |
| !!! | GTTTTGATTATAAATAAAAA+GGG | - | chr8_1:6208281-6208300 | Msa1174970:intron | 10.0% |
| !!! | GTTTTTTTTTTTTTTTTTGA+AGG | - | chr8_1:6208887-6208906 | Msa1174970:intron | 10.0% |
| !! | AATTAAATTATATACATGAA+TGG | + | chr8_1:6209522-6209541 | None:intergenic | 10.0% |
| !! | TTAATATAAAAATACCAGTA+AGG | + | chr8_1:6201913-6201932 | None:intergenic | 15.0% |
| !! | TATTAATAAAACTTTGAGTA+AGG | - | chr8_1:6202899-6202918 | Msa1174970:intron | 15.0% |
| !!! | TGATTTTTATTTTTTTGGAA+TGG | - | chr8_1:6203773-6203792 | Msa1174970:intron | 15.0% |
| !!! | TTATTTTAACGATCTATTTT+AGG | - | chr8_1:6203900-6203919 | Msa1174970:intron | 15.0% |
| !!! | TGCTTATTTTCAATTATTTA+TGG | - | chr8_1:6203953-6203972 | Msa1174970:intron | 15.0% |
| !! | AAATTGATATCGATAAATAA+AGG | + | chr8_1:6204182-6204201 | None:intergenic | 15.0% |
| !! | TTATTACAACAATACATATA+CGG | - | chr8_1:6204515-6204534 | Msa1174970:intron | 15.0% |
| !! | TGTAATATTAATTACACAAA+AGG | + | chr8_1:6204584-6204603 | None:intergenic | 15.0% |
| !!! | TTTCTTTTAAGAAATTGTTT+TGG | - | chr8_1:6204864-6204883 | Msa1174970:intron | 15.0% |
| !!! | AAAAATGTTATTTCTTTGTT+TGG | - | chr8_1:6205351-6205370 | Msa1174970:intron | 15.0% |
| !! | TTAAATGTAAAATACCAAAA+TGG | - | chr8_1:6205933-6205952 | Msa1174970:intron | 15.0% |
| !!! | ATTTGACTTTATTTTATCAT+TGG | - | chr8_1:6206754-6206773 | Msa1174970:CDS | 15.0% |
| !!! | TTTATCATTTGTTATAGAAA+TGG | - | chr8_1:6206973-6206992 | Msa1174970:intron | 15.0% |
| !! | TTACAAAAAAATTGTCAAAA+TGG | + | chr8_1:6207077-6207096 | None:intergenic | 15.0% |
| !! | TTTGATCCAATATAATTATT+TGG | - | chr8_1:6207215-6207234 | Msa1174970:intron | 15.0% |
| !! | ATATTAATGAGTTATAGTTA+AGG | - | chr8_1:6207548-6207567 | Msa1174970:CDS | 15.0% |
| !! | TTTCTTCTTAATTAACTATA+GGG | + | chr8_1:6207762-6207781 | None:intergenic | 15.0% |
| !!! | TTTTCTTCTTAATTAACTAT+AGG | + | chr8_1:6207763-6207782 | None:intergenic | 15.0% |
| !! | TAGTAAATAATTTCCTAATT+AGG | - | chr8_1:6208407-6208426 | Msa1174970:intron | 15.0% |
| !!! | ATTTTTTTTCTTTTTCTTTC+TGG | - | chr8_1:6208578-6208597 | Msa1174970:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTTGAAGG+AGG | - | chr8_1:6208890-6208909 | Msa1174970:intron | 15.0% |
| !!! | TACATATTCATATTTTCATT+TGG | - | chr8_1:6209413-6209432 | Msa1174970:intron | 15.0% |
| !!! | ACATATTCATATTTTCATTT+GGG | - | chr8_1:6209414-6209433 | Msa1174970:intron | 15.0% |
| !!! | TATATTTCTACACATATTCA+AGG | - | chr8_1:6201982-6202001 | Msa1174970:exon | 20.0% |
| !! | TTATATAAACAGCTTATCTT+AGG | + | chr8_1:6202288-6202307 | None:intergenic | 20.0% |
| !! | AAGATAAAATAAAGTCAAAC+TGG | - | chr8_1:6202311-6202330 | Msa1174970:intron | 20.0% |
| !! | CAGTCTAAATAACATAATAT+GGG | + | chr8_1:6202581-6202600 | None:intergenic | 20.0% |
| !! | TCAGTCTAAATAACATAATA+TGG | + | chr8_1:6202582-6202601 | None:intergenic | 20.0% |
| !! | TCAAGTTCAGTATAATAATT+GGG | + | chr8_1:6202702-6202721 | None:intergenic | 20.0% |
| !! | ATCAAGTTCAGTATAATAAT+TGG | + | chr8_1:6202703-6202722 | None:intergenic | 20.0% |
| !! | TATTATACTGAACTTGATTA+AGG | - | chr8_1:6202705-6202724 | Msa1174970:intron | 20.0% |
| !! | AAAACTTATCAGAAAATGTT+AGG | + | chr8_1:6203327-6203346 | None:intergenic | 20.0% |
| !!! | AAAAAAGTATAATGCTGATA+AGG | - | chr8_1:6203424-6203443 | Msa1174970:intron | 20.0% |
| !!! | GGGTTTGATTTTTATTTTTT+TGG | - | chr8_1:6203768-6203787 | Msa1174970:intron | 20.0% |
| !! | GTTTCTATAATATATTCAAC+AGG | - | chr8_1:6204304-6204323 | Msa1174970:intron | 20.0% |
| !!! | TTACATTTTCTCATTTTACT+TGG | - | chr8_1:6204374-6204393 | Msa1174970:intron | 20.0% |
| !! | AAAATAATATCAAACAAGAG+AGG | + | chr8_1:6204687-6204706 | None:intergenic | 20.0% |
| !!! | TATTATTTTGTTCAGATTCT+TGG | - | chr8_1:6204698-6204717 | Msa1174970:intron | 20.0% |
| !!! | ATTATTTTGTTCAGATTCTT+GGG | - | chr8_1:6204699-6204718 | Msa1174970:intron | 20.0% |
| !!! | TTTTAAGAAATTGTTTTGGA+GGG | - | chr8_1:6204868-6204887 | Msa1174970:intron | 20.0% |
| !! | CTTGAAAATAAAATATTCAC+AGG | + | chr8_1:6204926-6204945 | None:intergenic | 20.0% |
| !! | AAATAATTACATTAGTTGTG+CGG | - | chr8_1:6206131-6206150 | Msa1174970:intron | 20.0% |
| !!! | TTGTTTCACCTAATATTTTT+CGG | - | chr8_1:6206223-6206242 | Msa1174970:intron | 20.0% |
| !!! | AATAGCTTGAATTTTGTATT+TGG | - | chr8_1:6206432-6206451 | Msa1174970:CDS | 20.0% |
| !! | AGCTTATAACTTATATGAAA+TGG | - | chr8_1:6206925-6206944 | Msa1174970:intron | 20.0% |
| !!! | AAAAATTGTCAAAATGGATT+AGG | + | chr8_1:6207071-6207090 | None:intergenic | 20.0% |
| !! | CCTTAACCAAATAATTATAT+TGG | + | chr8_1:6207224-6207243 | None:intergenic | 20.0% |
| !! | CCAATATAATTATTTGGTTA+AGG | - | chr8_1:6207221-6207240 | Msa1174970:intron | 20.0% |
| !! | TTAATATTTCCTAACTGAAA+AGG | + | chr8_1:6207535-6207554 | None:intergenic | 20.0% |
| !!! | ACTTTATAAATTCATTTTCG+GGG | + | chr8_1:6207996-6208015 | None:intergenic | 20.0% |
| !!! | CACTTTATAAATTCATTTTC+GGG | + | chr8_1:6207997-6208016 | None:intergenic | 20.0% |
| !!! | CCACTTTATAAATTCATTTT+CGG | + | chr8_1:6207998-6208017 | None:intergenic | 20.0% |
| !! | CGAAAATGAATTTATAAAGT+GGG | - | chr8_1:6207996-6208015 | Msa1174970:intron | 20.0% |
| !! | TTAAGAACCTTAAAATTGTT+TGG | - | chr8_1:6208233-6208252 | Msa1174970:intron | 20.0% |
| !! | TAAGAACCTTAAAATTGTTT+GGG | - | chr8_1:6208234-6208253 | Msa1174970:intron | 20.0% |
| !! | TAAATAAAAAGGGAAATGTT+CGG | - | chr8_1:6208291-6208310 | Msa1174970:CDS | 20.0% |
| !! | AGTTAATAATCTTAGAACTT+TGG | - | chr8_1:6208340-6208359 | Msa1174970:CDS | 20.0% |
| !!! | ACAAGTTGATATTTTTCTTA+GGG | + | chr8_1:6208472-6208491 | None:intergenic | 20.0% |
| !!! | TACAAGTTGATATTTTTCTT+AGG | + | chr8_1:6208473-6208492 | None:intergenic | 20.0% |
| !! | TAAAAAGAAAAGTACAAACC+TGG | + | chr8_1:6201730-6201749 | None:intergenic | 25.0% |
| ! | GTGATATATGAAATTAATCC+AGG | + | chr8_1:6201823-6201842 | None:intergenic | 25.0% |
| ! | ATAAAAATACCAGTAAGGAA+TGG | + | chr8_1:6201908-6201927 | None:intergenic | 25.0% |
| !!! | ATACATAAGAGAAGGTATTA+TGG | + | chr8_1:6201943-6201962 | None:intergenic | 25.0% |
| !!! | TTCAAGGTTTCTTTATTTTG+TGG | - | chr8_1:6201998-6202017 | Msa1174970:exon | 25.0% |
| ! | TATATCGTACATATAATGTC+AGG | + | chr8_1:6202204-6202223 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr8_1:6202387-6202406 | Msa1174970:intron | 25.0% |
| ! | AATAAGCTGCAAAAAACTTA+TGG | - | chr8_1:6202457-6202476 | Msa1174970:intron | 25.0% |
| ! | CTTCTTAAATACTAGAGAAA+AGG | + | chr8_1:6202620-6202639 | None:intergenic | 25.0% |
| !! | CTTTTCTCTAGTATTTAAGA+AGG | - | chr8_1:6202618-6202637 | Msa1174970:intron | 25.0% |
| ! | ATTAATAGACTTAACAGCAT+TGG | + | chr8_1:6202886-6202905 | None:intergenic | 25.0% |
| ! | TAATAAAACTTTGAGTAAGG+AGG | - | chr8_1:6202902-6202921 | Msa1174970:intron | 25.0% |
| !!! | GGTAAATTTCTCTTCTTTTT+TGG | - | chr8_1:6202970-6202989 | Msa1174970:intron | 25.0% |
| ! | AATAATGTCAAAATAACACC+CGG | + | chr8_1:6203019-6203038 | None:intergenic | 25.0% |
| !!! | AAGTTGATTTGGTATTTGAA+AGG | - | chr8_1:6203928-6203947 | Msa1174970:intron | 25.0% |
| !!! | AGTTGATTTGGTATTTGAAA+GGG | - | chr8_1:6203929-6203948 | Msa1174970:intron | 25.0% |
| ! | ATCTACATGTAACAAAACAA+AGG | + | chr8_1:6204062-6204081 | None:intergenic | 25.0% |
| ! | AAATTCAGGGAAAATTATGA+TGG | + | chr8_1:6204342-6204361 | None:intergenic | 25.0% |
| ! | AATTTCCACTTCAAAATTCA+GGG | + | chr8_1:6204355-6204374 | None:intergenic | 25.0% |
| ! | AAATTTCCACTTCAAAATTC+AGG | + | chr8_1:6204356-6204375 | None:intergenic | 25.0% |
| !! | TCATTACAGTTCATTCTTTT+GGG | - | chr8_1:6204407-6204426 | Msa1174970:intron | 25.0% |
| !!! | TTATTTTGTTCAGATTCTTG+GGG | - | chr8_1:6204700-6204719 | Msa1174970:intron | 25.0% |
| !!! | CTTTTAAGAAATTGTTTTGG+AGG | - | chr8_1:6204867-6204886 | Msa1174970:intron | 25.0% |
| !! | TAATTTAAGATCTTCAGATG+TGG | + | chr8_1:6205124-6205143 | None:intergenic | 25.0% |
| !!! | AAAAAGTACTCAGAATTTTG+AGG | + | chr8_1:6205175-6205194 | None:intergenic | 25.0% |
| !!! | TTCTGAGTACTTTTTTTAGA+TGG | - | chr8_1:6205180-6205199 | Msa1174970:intron | 25.0% |
| !! | TTTTCTTTCGTCATCAAAAA+AGG | + | chr8_1:6205295-6205314 | None:intergenic | 25.0% |
| !!! | ATGTTATTTCTTTGTTTGGT+AGG | - | chr8_1:6205355-6205374 | Msa1174970:intron | 25.0% |
| ! | AAATACCAAAATGGAATACT+TGG | - | chr8_1:6205942-6205961 | Msa1174970:intron | 25.0% |
| ! | TTAGCATATTGAAAGGATTT+AGG | - | chr8_1:6206560-6206579 | Msa1174970:intron | 25.0% |
| ! | TAGCATATTGAAAGGATTTA+GGG | - | chr8_1:6206561-6206580 | Msa1174970:intron | 25.0% |
| ! | GATAGTTTATGAAAATAAGC+TGG | + | chr8_1:6206692-6206711 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACATCTTA+TGG | + | chr8_1:6206873-6206892 | None:intergenic | 25.0% |
| ! | ATTGTGATCTTGCATTTAAA+TGG | - | chr8_1:6207251-6207270 | Msa1174970:intron | 25.0% |
| ! | GTTGCTTAATGTTAATACTA+TGG | - | chr8_1:6207292-6207311 | Msa1174970:intron | 25.0% |
| !!! | TATATACTGACCTTTAAGAT+AGG | + | chr8_1:6207475-6207494 | None:intergenic | 25.0% |
| !!! | TGTTAGTTCTAGAATCATTA+CGG | - | chr8_1:6207496-6207515 | Msa1174970:intron | 25.0% |
| ! | AGAGACAAATGTTTCTTAAA+TGG | + | chr8_1:6207806-6207825 | None:intergenic | 25.0% |
| ! | ATTCTTTGTAAACTTGAAGT+TGG | - | chr8_1:6207865-6207884 | Msa1174970:intron | 25.0% |
| ! | CCGAAAATGAATTTATAAAG+TGG | - | chr8_1:6207995-6208014 | Msa1174970:intron | 25.0% |
| ! | CTAACTCAAACTTACAAATT+CGG | + | chr8_1:6208043-6208062 | None:intergenic | 25.0% |
| !! | ATTTAGAGTCTAAGATTCAT+TGG | - | chr8_1:6208093-6208112 | Msa1174970:CDS | 25.0% |
| !! | TTTAGAGTCTAAGATTCATT+GGG | - | chr8_1:6208094-6208113 | Msa1174970:CDS | 25.0% |
| !!! | TTTTCCGGTTTTGTAATATT+AGG | - | chr8_1:6208173-6208192 | Msa1174970:CDS | 25.0% |
| ! | CTAACCTAATATTACAAAAC+CGG | + | chr8_1:6208180-6208199 | None:intergenic | 25.0% |
| !!! | CTAAACCTAGTCTTAAAATT+TGG | + | chr8_1:6208210-6208229 | None:intergenic | 25.0% |
| !! | TTTGAACCCAAACAATTTTA+AGG | + | chr8_1:6208243-6208262 | None:intergenic | 25.0% |
| ! | AAATAAAAAGGGAAATGTTC+GGG | - | chr8_1:6208292-6208311 | Msa1174970:CDS | 25.0% |
| ! | TATCAGTTACAATAAGTTTG+CGG | + | chr8_1:6208729-6208748 | None:intergenic | 25.0% |
| ! | GAGTTTATGAAAACAACTTA+TGG | - | chr8_1:6208853-6208872 | Msa1174970:intron | 25.0% |
| !! | TCATTCAAACATTCTTTTCT+AGG | - | chr8_1:6209097-6209116 | Msa1174970:CDS | 25.0% |
| !! | TTTTGCTTTCAATGTATTTC+AGG | - | chr8_1:6209143-6209162 | Msa1174970:CDS | 25.0% |
| ! | GAAGAAGAACTTAACAAAAA+TGG | - | chr8_1:6209177-6209196 | Msa1174970:CDS | 25.0% |
| !!! | ATACTGAAAGCTTTGAAAAT+TGG | - | chr8_1:6209205-6209224 | Msa1174970:CDS | 25.0% |
| !!! | TACTGAAAGCTTTGAAAATT+GGG | - | chr8_1:6209206-6209225 | Msa1174970:CDS | 25.0% |
| !!! | AAGCTGATTTTTGTTCAAAA+GGG | - | chr8_1:6209381-6209400 | Msa1174970:intron | 25.0% |
| !! | TATTCATATTTTCATTTGGG+AGG | - | chr8_1:6209417-6209436 | Msa1174970:intron | 25.0% |
| !! | ATAGCTTTTAAACCTTAGTT+TGG | - | chr8_1:6209575-6209594 | Msa1174970:CDS | 25.0% |
| !! | TAGCTTTTAAACCTTAGTTT+GGG | - | chr8_1:6209576-6209595 | Msa1174970:CDS | 25.0% |
| AACATAAACCGGTATAGTAT+AGG | + | chr8_1:6201853-6201872 | None:intergenic | 30.0% | |
| CTCGTGAAATTAACATAAAC+CGG | + | chr8_1:6201864-6201883 | None:intergenic | 30.0% | |
| ATGTCAGGTTTCATATTCAA+TGG | + | chr8_1:6202189-6202208 | None:intergenic | 30.0% | |
| ! | TTTGTTTCTCACTTACGTTT+GGG | - | chr8_1:6202247-6202266 | Msa1174970:intron | 30.0% |
| GCTTATTTCAACTTATCTAC+TGG | + | chr8_1:6202538-6202557 | None:intergenic | 30.0% | |
| ATTCTCAAAATGAAGTCTTG+TGG | + | chr8_1:6202659-6202678 | None:intergenic | 30.0% | |
| ATACTGAACTTGATTAAGGT+AGG | - | chr8_1:6202709-6202728 | Msa1174970:intron | 30.0% | |
| ATAATGTCAAAATAACACCC+GGG | + | chr8_1:6203018-6203037 | None:intergenic | 30.0% | |
| CTTACTCAGAAAAGGAATAT+GGG | + | chr8_1:6203173-6203192 | None:intergenic | 30.0% | |
| ACTTACTCAGAAAAGGAATA+TGG | + | chr8_1:6203174-6203193 | None:intergenic | 30.0% | |
| TTATGGTACTTACTCAGAAA+AGG | + | chr8_1:6203181-6203200 | None:intergenic | 30.0% | |
| TCATTAAATCCTTTGCCAAA+GGG | + | chr8_1:6203664-6203683 | None:intergenic | 30.0% | |
| TTCATTAAATCCTTTGCCAA+AGG | + | chr8_1:6203665-6203684 | None:intergenic | 30.0% | |
| AATGAAAGTTTATGAGTCCA+TGG | - | chr8_1:6203679-6203698 | Msa1174970:intron | 30.0% | |
| ATGAAAGTTTATGAGTCCAT+GGG | - | chr8_1:6203680-6203699 | Msa1174970:intron | 30.0% | |
| !! | ACACATTAGCCTTTCAATAT+GGG | - | chr8_1:6203705-6203724 | Msa1174970:intron | 30.0% |
| AGGTAATCTTTCTATCTTTC+AGG | - | chr8_1:6203747-6203766 | Msa1174970:intron | 30.0% | |
| GGTAATCTTTCTATCTTTCA+GGG | - | chr8_1:6203748-6203767 | Msa1174970:intron | 30.0% | |
| AGTATATGTAGTGCAAATGT+TGG | - | chr8_1:6203804-6203823 | Msa1174970:CDS | 30.0% | |
| AAACAGTCGTTATATAGCAT+CGG | + | chr8_1:6203868-6203887 | None:intergenic | 30.0% | |
| ! | TTTAGGTAGCAAAGTTGATT+TGG | - | chr8_1:6203917-6203936 | Msa1174970:intron | 30.0% |
| TACATGTAACAAAACAAAGG+TGG | + | chr8_1:6204059-6204078 | None:intergenic | 30.0% | |
| CAATGAATCAAGAAAACAGT+AGG | + | chr8_1:6204120-6204139 | None:intergenic | 30.0% | |
| !! | ATTTTCCCTGAATTTTGAAG+TGG | - | chr8_1:6204347-6204366 | Msa1174970:intron | 30.0% |
| ! | CTCATTACAGTTCATTCTTT+TGG | - | chr8_1:6204406-6204425 | Msa1174970:intron | 30.0% |
| !! | CAGATATTTTCTAGAAGTAG+AGG | - | chr8_1:6204441-6204460 | Msa1174970:intron | 30.0% |
| ATTGTTGTAATAACGCTGTA+GGG | + | chr8_1:6204508-6204527 | None:intergenic | 30.0% | |
| TATTGTTGTAATAACGCTGT+AGG | + | chr8_1:6204509-6204528 | None:intergenic | 30.0% | |
| TACAACAATACATATACGGA+CGG | - | chr8_1:6204519-6204538 | Msa1174970:intron | 30.0% | |
| GTATACTTTCAGATTACCTA+TGG | + | chr8_1:6204620-6204639 | None:intergenic | 30.0% | |
| ! | TCAGATCAACATTACCTTTT+TGG | - | chr8_1:6204768-6204787 | Msa1174970:intron | 30.0% |
| TCAATTCCATCTGCTAAATT+TGG | + | chr8_1:6204804-6204823 | None:intergenic | 30.0% | |
| AATTTAGCAGATGGAATTGA+TGG | - | chr8_1:6204804-6204823 | Msa1174970:intron | 30.0% | |
| ATTTAGCAGATGGAATTGAT+GGG | - | chr8_1:6204805-6204824 | Msa1174970:intron | 30.0% | |
| ATGAACCTTTACATCATTAG+AGG | - | chr8_1:6204957-6204976 | Msa1174970:intron | 30.0% | |
| TAGTACCTCTAATGATGTAA+AGG | + | chr8_1:6204965-6204984 | None:intergenic | 30.0% | |
| ACTCGAATCATCATGTTATA+TGG | + | chr8_1:6205071-6205090 | None:intergenic | 30.0% | |
| AACACAATAACAATGGCATT+TGG | + | chr8_1:6205098-6205117 | None:intergenic | 30.0% | |
| ATGACACAAACTTGTGTAAT+TGG | - | chr8_1:6205570-6205589 | Msa1174970:intron | 30.0% | |
| ACGTGCTATCAATATTATAC+AGG | - | chr8_1:6205651-6205670 | Msa1174970:intron | 30.0% | |
| ! | TGTGATCGTTTTCATAATGT+TGG | + | chr8_1:6205703-6205722 | None:intergenic | 30.0% |
| AAGTTTACCAAACAAAGTCT+CGG | + | chr8_1:6205837-6205856 | None:intergenic | 30.0% | |
| ! | CTATACCAAGTATTCCATTT+TGG | + | chr8_1:6205950-6205969 | None:intergenic | 30.0% |
| AAATGGAATACTTGGTATAG+AGG | - | chr8_1:6205950-6205969 | Msa1174970:intron | 30.0% | |
| ! | CTTTATTTGTCGAACAAAGT+TGG | - | chr8_1:6205996-6206015 | Msa1174970:intron | 30.0% |
| ! | AAATTTGAACGCAACTTTTG+AGG | + | chr8_1:6206061-6206080 | None:intergenic | 30.0% |
| AGAGCATAATACGAAATCTA+TGG | + | chr8_1:6206180-6206199 | None:intergenic | 30.0% | |
| !! | TTTCACCTAATATTTTTCGG+AGG | - | chr8_1:6206226-6206245 | Msa1174970:intron | 30.0% |
| TCAGTCTATTTCGATTGTTT+AGG | - | chr8_1:6206308-6206327 | Msa1174970:intron | 30.0% | |
| CAGTCTATTTCGATTGTTTA+GGG | - | chr8_1:6206309-6206328 | Msa1174970:intron | 30.0% | |
| ! | TTCATCCATGATTTAGAACA+CGG | - | chr8_1:6206335-6206354 | Msa1174970:intron | 30.0% |
| CCTTTCAATATGCTAATTGA+AGG | + | chr8_1:6206556-6206575 | None:intergenic | 30.0% | |
| CCTTCAATTAGCATATTGAA+AGG | - | chr8_1:6206553-6206572 | Msa1174970:intron | 30.0% | |
| AGCATATTGAAAGGATTTAG+GGG | - | chr8_1:6206562-6206581 | Msa1174970:intron | 30.0% | |
| ! | AATAAGCTGGAATTAGCTTA+TGG | + | chr8_1:6206679-6206698 | None:intergenic | 30.0% |
| AAGCTATCTTAGAGAGATTA+TGG | + | chr8_1:6206897-6206916 | None:intergenic | 30.0% | |
| !! | AAAATGGATTAGGTCGTATT+TGG | + | chr8_1:6207061-6207080 | None:intergenic | 30.0% |
| TGTCATAACATGTTAGTCAA+GGG | - | chr8_1:6207099-6207118 | Msa1174970:intron | 30.0% | |
| !!! | TGGATTTCATTTTTTGAGCA+TGG | - | chr8_1:6207165-6207184 | Msa1174970:intron | 30.0% |
| !!! | TTTCATTTTTTGAGCATGGA+AGG | - | chr8_1:6207169-6207188 | Msa1174970:intron | 30.0% |
| !!! | TTCATTTTTTGAGCATGGAA+GGG | - | chr8_1:6207170-6207189 | Msa1174970:intron | 30.0% |
| ! | AAAAACCTAGTTCTTGAGTT+AGG | - | chr8_1:6207318-6207337 | Msa1174970:intron | 30.0% |
| ! | AAAACCTAGTTCTTGAGTTA+GGG | - | chr8_1:6207319-6207338 | Msa1174970:intron | 30.0% |
| ATTGATGCCAATATTGTTGA+TGG | - | chr8_1:6207374-6207393 | Msa1174970:intron | 30.0% | |
| TTCATTCACAATATTGTCTG+AGG | + | chr8_1:6207419-6207438 | None:intergenic | 30.0% | |
| TGTGAATGAACTAATAACTG+AGG | - | chr8_1:6207429-6207448 | Msa1174970:intron | 30.0% | |
| TACATTAATATGTGCCCTTA+GGG | + | chr8_1:6207590-6207609 | None:intergenic | 30.0% | |
| AAGAAACATTTGTCTCTTTC+TGG | - | chr8_1:6207809-6207828 | Msa1174970:CDS | 30.0% | |
| CATCAATAAGTCTTACTAAC+AGG | + | chr8_1:6207844-6207863 | None:intergenic | 30.0% | |
| ACTTCACAATGCAAACTTAT+TGG | - | chr8_1:6207895-6207914 | Msa1174970:intron | 30.0% | |
| ! | CGAATTTGTAAGTTTGAGTT+AGG | - | chr8_1:6208041-6208060 | Msa1174970:intron | 30.0% |
| GACTAACACAAATTACAAGA+TGG | - | chr8_1:6208063-6208082 | Msa1174970:intron | 30.0% | |
| !! | CGGTTTTGTAATATTAGGTT+AGG | - | chr8_1:6208178-6208197 | Msa1174970:CDS | 30.0% |
| !! | CTAGTCTTAAAATTTGGTAC+GGG | + | chr8_1:6208204-6208223 | None:intergenic | 30.0% |
| !! | CCTAGTCTTAAAATTTGGTA+CGG | + | chr8_1:6208205-6208224 | None:intergenic | 30.0% |
| AACTTGTGTATTCCATACAT+TGG | - | chr8_1:6208363-6208382 | Msa1174970:CDS | 30.0% | |
| ACAGTTCAATTTCCAATGTA+TGG | + | chr8_1:6208378-6208397 | None:intergenic | 30.0% | |
| ! | CTCTTTAAGGATTCCTAATT+AGG | + | chr8_1:6208423-6208442 | None:intergenic | 30.0% |
| TATAGAAACCAGTAATCTGA+TGG | - | chr8_1:6208523-6208542 | Msa1174970:intron | 30.0% | |
| !! | TTCTTTTTCTTTCTGGTGTA+TGG | - | chr8_1:6208585-6208604 | Msa1174970:intron | 30.0% |
| ! | TTTTCATAAGCAATCCTAGA+GGG | + | chr8_1:6208952-6208971 | None:intergenic | 30.0% |
| ! | ATTTTCATAAGCAATCCTAG+AGG | + | chr8_1:6208953-6208972 | None:intergenic | 30.0% |
| GCAAAATTGTGTTTACCAAT+TGG | + | chr8_1:6209129-6209148 | None:intergenic | 30.0% | |
| TTTGAAAATTGGGTTACTCA+TGG | - | chr8_1:6209216-6209235 | Msa1174970:intron | 30.0% | |
| ! | CTTTGCTGTACAGAAATAAA+TGG | - | chr8_1:6209316-6209335 | Msa1174970:intron | 30.0% |
| !! | GAAGCTGATTTTTGTTCAAA+AGG | - | chr8_1:6209380-6209399 | Msa1174970:intron | 30.0% |
| TGGTAATCAAGTCAAACTTG+CGG | + | chr8_1:6201677-6201696 | None:intergenic | 35.0% | |
| ! | TTGACTTGATTACCATTGCT+AGG | - | chr8_1:6201682-6201701 | Msa1174970:three_prime_UTR | 35.0% |
| ! | ACGAGTTTCTAGACAAGATT+TGG | - | chr8_1:6201879-6201898 | Msa1174970:three_prime_UTR | 35.0% |
| GACTAGAGATACATAAGAGA+AGG | + | chr8_1:6201951-6201970 | None:intergenic | 35.0% | |
| !!! | GTTTCTTTATTTTGTGGTGC+AGG | - | chr8_1:6202004-6202023 | Msa1174970:CDS | 35.0% |
| AGGTTTCATATTCAATGGAG+AGG | + | chr8_1:6202184-6202203 | None:intergenic | 35.0% | |
| CAAACGTAAGTGAGAAACAA+AGG | + | chr8_1:6202248-6202267 | None:intergenic | 35.0% | |
| ! | CTTTGTTTCTCACTTACGTT+TGG | - | chr8_1:6202246-6202265 | Msa1174970:intron | 35.0% |
| TACGTTTGGGTAAACAACTT+AGG | - | chr8_1:6202260-6202279 | Msa1174970:intron | 35.0% | |
| TAACATAATATGGGCCTGTT+TGG | + | chr8_1:6202572-6202591 | None:intergenic | 35.0% | |
| ! | TTTAGACTGACTGCTCATTT+TGG | - | chr8_1:6202592-6202611 | Msa1174970:intron | 35.0% |
| GAGAATCTTGTCATGAGATA+TGG | - | chr8_1:6202673-6202692 | Msa1174970:intron | 35.0% | |
| CGAGATGGAAAAATAAAACC+TGG | + | chr8_1:6202764-6202783 | None:intergenic | 35.0% | |
| ATCTTAGTTTAGACACGAGA+TGG | + | chr8_1:6202779-6202798 | None:intergenic | 35.0% | |
| ! | ATTGTCTGAGGTATCTTCAT+TGG | - | chr8_1:6202925-6202944 | Msa1174970:intron | 35.0% |
| ! | TTGTCTGAGGTATCTTCATT+GGG | - | chr8_1:6202926-6202945 | Msa1174970:intron | 35.0% |
| !!! | TTTTTTGGTCCATGCTCAAT+AGG | - | chr8_1:6202985-6203004 | Msa1174970:intron | 35.0% |
| ATTAACAACTTTCAGCAGCA+AGG | - | chr8_1:6203041-6203060 | Msa1174970:intron | 35.0% | |
| AGGGTCAAAATGCATTGTTA+TGG | + | chr8_1:6203198-6203217 | None:intergenic | 35.0% | |
| CATTAGTACAACAGCAAAGA+GGG | + | chr8_1:6203217-6203236 | None:intergenic | 35.0% | |
| ATTGAAGATCAAACCATCTG+TGG | - | chr8_1:6203267-6203286 | Msa1174970:intron | 35.0% | |
| GATGAATTTCTTGTTGAGCA+AGG | - | chr8_1:6203395-6203414 | Msa1174970:intron | 35.0% | |
| GCTGATAAGGAAACAGAAAA+TGG | - | chr8_1:6203437-6203456 | Msa1174970:intron | 35.0% | |
| AAGGAAACAGAAAATGGCAA+TGG | - | chr8_1:6203443-6203462 | Msa1174970:intron | 35.0% | |
| AATGGCAATGGTTATTACAG+TGG | - | chr8_1:6203455-6203474 | Msa1174970:intron | 35.0% | |
| AATGGTTATTACAGTGGTGA+TGG | - | chr8_1:6203461-6203480 | Msa1174970:intron | 35.0% | |
| ATAAGCATACTGTGCAACAT+TGG | + | chr8_1:6203570-6203589 | None:intergenic | 35.0% | |
| AATGTTGCACAGTATGCTTA+TGG | - | chr8_1:6203569-6203588 | Msa1174970:intron | 35.0% | |
| GAATCCCCACATATTAAACT+TGG | - | chr8_1:6203635-6203654 | Msa1174970:intron | 35.0% | |
| GTTGCCAAGTTTAATATGTG+GGG | + | chr8_1:6203642-6203661 | None:intergenic | 35.0% | |
| GGTTGCCAAGTTTAATATGT+GGG | + | chr8_1:6203643-6203662 | None:intergenic | 35.0% | |
| TATTAAACTTGGCAACCCTT+TGG | - | chr8_1:6203646-6203665 | Msa1174970:intron | 35.0% | |
| !! | GACACATTAGCCTTTCAATA+TGG | - | chr8_1:6203704-6203723 | Msa1174970:intron | 35.0% |
| !! | CACATTAGCCTTTCAATATG+GGG | - | chr8_1:6203706-6203725 | Msa1174970:intron | 35.0% |
| !! | ACATTAGCCTTTCAATATGG+GGG | - | chr8_1:6203707-6203726 | Msa1174970:intron | 35.0% |
| AGTGCAAATGTTGGACTTTA+TGG | - | chr8_1:6203813-6203832 | Msa1174970:CDS | 35.0% | |
| ! | CGTTATATAGCATCGGATTT+CGG | + | chr8_1:6203861-6203880 | None:intergenic | 35.0% |
| TGATGATCTTCAACTCACTA+GGG | + | chr8_1:6203984-6204003 | None:intergenic | 35.0% | |
| ATGATGATCTTCAACTCACT+AGG | + | chr8_1:6203985-6204004 | None:intergenic | 35.0% | |
| ! | CATCATCACTTCTTGATTTG+AGG | - | chr8_1:6204218-6204237 | Msa1174970:intron | 35.0% |
| TTATGAACTCCTCTCGTAAA+AGG | - | chr8_1:6204249-6204268 | Msa1174970:intron | 35.0% | |
| ! | TTTCTAGAAGTAGAGGTCAA+TGG | - | chr8_1:6204448-6204467 | Msa1174970:intron | 35.0% |
| ACAACAATACATATACGGAC+GGG | - | chr8_1:6204520-6204539 | Msa1174970:intron | 35.0% | |
| !! | CATTACCTTTTTGGAAGTCA+TGG | - | chr8_1:6204777-6204796 | Msa1174970:intron | 35.0% |
| ! | ATGGAATTGATGGGTATGTT+TGG | - | chr8_1:6204814-6204833 | Msa1174970:intron | 35.0% |
| !!! | TAAGAAATTGTTTTGGAGGG+AGG | - | chr8_1:6204871-6204890 | Msa1174970:intron | 35.0% |
| GTGGAGTAACACAATAACAA+TGG | + | chr8_1:6205105-6205124 | None:intergenic | 35.0% | |
| ! | AGCTTTGACTTATCTATCGA+AGG | - | chr8_1:6205230-6205249 | Msa1174970:intron | 35.0% |
| TCGAAGGACAAATATCACAT+AGG | - | chr8_1:6205246-6205265 | Msa1174970:intron | 35.0% | |
| TCTTTCGTCATCAAAAAAGG+AGG | + | chr8_1:6205292-6205311 | None:intergenic | 35.0% | |
| ATTAGAAGATCACAATCCGA+TGG | - | chr8_1:6205384-6205403 | Msa1174970:intron | 35.0% | |
| ! | TCAGGATTTTCAGATGAGTA+CGG | + | chr8_1:6205465-6205484 | None:intergenic | 35.0% |
| ! | TCCTGATAAGCAATCTCTTT+TGG | - | chr8_1:6205479-6205498 | Msa1174970:CDS | 35.0% |
| TCCAAAAGAGATTGCTTATC+AGG | + | chr8_1:6205483-6205502 | None:intergenic | 35.0% | |
| CACGTAAGTTTCTAAACATG+TGG | + | chr8_1:6205636-6205655 | None:intergenic | 35.0% | |
| TTATACAGGCAAGTTTATGC+AGG | - | chr8_1:6205665-6205684 | Msa1174970:intron | 35.0% | |
| CTTTCTTCCTAAATGAGAAG+CGG | - | chr8_1:6205877-6205896 | Msa1174970:intron | 35.0% | |
| !!! | ACTTAGAAGTTTGTTTTGGC+TGG | + | chr8_1:6205905-6205924 | None:intergenic | 35.0% |
| !! | CCTCACTTAGAAGTTTGTTT+TGG | + | chr8_1:6205909-6205928 | None:intergenic | 35.0% |
| CCAAAACAAACTTCTAAGTG+AGG | - | chr8_1:6205906-6205925 | Msa1174970:intron | 35.0% | |
| !!! | TCGAACAAAGTTGGTTTTGT+TGG | - | chr8_1:6206005-6206024 | Msa1174970:intron | 35.0% |
| !!! | GTTGGTTTTGTTGGTTGTTT+TGG | - | chr8_1:6206014-6206033 | Msa1174970:intron | 35.0% |
| AAAGTTGCGTTCAAATTTGC+TGG | - | chr8_1:6206063-6206082 | Msa1174970:intron | 35.0% | |
| TTAGGCCTCCGAAAAATATT+AGG | + | chr8_1:6206234-6206253 | None:intergenic | 35.0% | |
| TCTATTTCGATTGTTTAGGG+AGG | - | chr8_1:6206312-6206331 | Msa1174970:intron | 35.0% | |
| ! | ATTGTCCGTGTTCTAAATCA+TGG | + | chr8_1:6206343-6206362 | None:intergenic | 35.0% |
| GGACTATAGCATGAACATAA+AGG | + | chr8_1:6206389-6206408 | None:intergenic | 35.0% | |
| TAATTGAAGGAACTGAGTGA+AGG | + | chr8_1:6206543-6206562 | None:intergenic | 35.0% | |
| GCATATTGAAAGGATTTAGG+GGG | - | chr8_1:6206563-6206582 | Msa1174970:intron | 35.0% | |
| ATCACAAGTGCTTATGTCAA+TGG | + | chr8_1:6206617-6206636 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTGATACTGTTT+TGG | - | chr8_1:6206624-6206643 | Msa1174970:intron | 35.0% |
| ! | AGCACTTGTGATACTGTTTT+GGG | - | chr8_1:6206625-6206644 | Msa1174970:intron | 35.0% |
| ! | GAATTAGCTTATGGACACAT+CGG | + | chr8_1:6206670-6206689 | None:intergenic | 35.0% |
| AGTGCGTAATCAAGAGTTTA+TGG | - | chr8_1:6206829-6206848 | Msa1174970:intron | 35.0% | |
| CTGTCATAACATGTTAGTCA+AGG | - | chr8_1:6207098-6207117 | Msa1174970:intron | 35.0% | |
| TACTGAAGTGAATTCTGATG+TGG | - | chr8_1:6207129-6207148 | Msa1174970:intron | 35.0% | |
| GTGAATTCTGATGTGGAATT+AGG | - | chr8_1:6207136-6207155 | Msa1174970:intron | 35.0% | |
| AATTCTGATGTGGAATTAGG+AGG | - | chr8_1:6207139-6207158 | Msa1174970:intron | 35.0% | |
| ATTCTGATGTGGAATTAGGA+GGG | - | chr8_1:6207140-6207159 | Msa1174970:intron | 35.0% | |
| ACCTGTACCATCAACAATAT+TGG | + | chr8_1:6207384-6207403 | None:intergenic | 35.0% | |
| TGAATCTGGACCTATCTTAA+AGG | - | chr8_1:6207462-6207481 | Msa1174970:intron | 35.0% | |
| ! | ACATAACTGCCTTTTCAGTT+AGG | - | chr8_1:6207523-6207542 | Msa1174970:CDS | 35.0% |
| GTACATTAATATGTGCCCTT+AGG | + | chr8_1:6207591-6207610 | None:intergenic | 35.0% | |
| TTGTCTCTTTCTGGATTTCA+AGG | - | chr8_1:6207818-6207837 | Msa1174970:CDS | 35.0% | |
| !! | GATCTCTATTTTGTTGTCCT+GGG | - | chr8_1:6207940-6207959 | Msa1174970:intron | 35.0% |
| AGCTTGTAAGATGAGAGATA+TGG | + | chr8_1:6208151-6208170 | None:intergenic | 35.0% | |
| ATATCTCTCATCTTACAAGC+TGG | - | chr8_1:6208150-6208169 | Msa1174970:CDS | 35.0% | |
| !!! | CCGTACCAAATTTTAAGACT+AGG | - | chr8_1:6208202-6208221 | Msa1174970:intron | 35.0% |
| !! | AATCCTTAAAGAGTGCTCTT+AGG | - | chr8_1:6208430-6208449 | Msa1174970:intron | 35.0% |
| ! | ACTGGTTTCTATACGAAACT+TGG | + | chr8_1:6208516-6208535 | None:intergenic | 35.0% |
| AAACCAGTAATCTGATGGTA+TGG | - | chr8_1:6208528-6208547 | Msa1174970:intron | 35.0% | |
| AAATAAGAGAGCTTAGAGAG+AGG | + | chr8_1:6208653-6208672 | None:intergenic | 35.0% | |
| GTAACTGATAAGCTCTCATA+AGG | - | chr8_1:6208739-6208758 | Msa1174970:intron | 35.0% | |
| AAGGTAGAAGCTAATCCAAA+CGG | - | chr8_1:6208758-6208777 | Msa1174970:intron | 35.0% | |
| AAAAACACTAAGAACCCGTT+TGG | + | chr8_1:6208776-6208795 | None:intergenic | 35.0% | |
| !!! | ACGGGTTCTTAGTGTTTTTT+TGG | - | chr8_1:6208777-6208796 | Msa1174970:intron | 35.0% |
| CTTTCAATGTATTTCAGGAG+AGG | - | chr8_1:6209148-6209167 | Msa1174970:CDS | 35.0% | |
| ACCTATATCAACTTATCCGA+AGG | - | chr8_1:6209279-6209298 | Msa1174970:intron | 35.0% | |
| !! | TCCTTCGGATAAGTTGATAT+AGG | + | chr8_1:6209283-6209302 | None:intergenic | 35.0% |
| AGTCATGAATTCTCATCCTT+CGG | + | chr8_1:6209298-6209317 | None:intergenic | 35.0% | |
| GATACAAAAGCAAATAGCAG+TGG | - | chr8_1:6209347-6209366 | Msa1174970:intron | 35.0% | |
| ! | TATTTTCATTTGGGAGGTAG+TGG | - | chr8_1:6209423-6209442 | Msa1174970:intron | 35.0% |
| TGATACTGTACCTAATTGGA+GGG | + | chr8_1:6209484-6209503 | None:intergenic | 35.0% | |
| TTGATACTGTACCTAATTGG+AGG | + | chr8_1:6209485-6209504 | None:intergenic | 35.0% | |
| TGCTTGATACTGTACCTAAT+TGG | + | chr8_1:6209488-6209507 | None:intergenic | 35.0% | |
| ! | TTTAAACCTTAGTTTGGGTC+TGG | - | chr8_1:6209581-6209600 | Msa1174970:CDS | 35.0% |
| CGAGTGTACCTATACTATAC+CGG | - | chr8_1:6201842-6201861 | Msa1174970:three_prime_UTR | 40.0% | |
| TGAAACGAGGAGTCAATGAA+AGG | - | chr8_1:6202031-6202050 | Msa1174970:CDS | 40.0% | |
| GAAACGAGGAGTCAATGAAA+GGG | - | chr8_1:6202032-6202051 | Msa1174970:CDS | 40.0% | |
| AAACGAGGAGTCAATGAAAG+GGG | - | chr8_1:6202033-6202052 | Msa1174970:CDS | 40.0% | |
| !! | CACAGAACTGATTTGCATTG+GGG | + | chr8_1:6202118-6202137 | None:intergenic | 40.0% |
| !! | CCACAGAACTGATTTGCATT+GGG | + | chr8_1:6202119-6202138 | None:intergenic | 40.0% |
| !! | ACCACAGAACTGATTTGCAT+TGG | + | chr8_1:6202120-6202139 | None:intergenic | 40.0% |
| AAGCACTTGGGAGACTATTT+GGG | + | chr8_1:6202512-6202531 | None:intergenic | 40.0% | |
| TAAGCACTTGGGAGACTATT+TGG | + | chr8_1:6202513-6202532 | None:intergenic | 40.0% | |
| ATCTACTGGCATAAGCACTT+GGG | + | chr8_1:6202524-6202543 | None:intergenic | 40.0% | |
| TATCTACTGGCATAAGCACT+TGG | + | chr8_1:6202525-6202544 | None:intergenic | 40.0% | |
| AGCCAATCCAATTTCCAAAC+AGG | - | chr8_1:6202555-6202574 | Msa1174970:intron | 40.0% | |
| ATATGGGCCTGTTTGGAAAT+TGG | + | chr8_1:6202565-6202584 | None:intergenic | 40.0% | |
| ! | AGTCTTGTGGCTTCAAACAT+TGG | + | chr8_1:6202646-6202665 | None:intergenic | 40.0% |
| TAGGCATTTCTACACGTGTA+AGG | - | chr8_1:6202728-6202747 | Msa1174970:intron | 40.0% | |
| GTGTAAGGAAATCATTGACC+AGG | - | chr8_1:6202743-6202762 | Msa1174970:intron | 40.0% | |
| ATCTTCATTGGGATCTGACT+TGG | - | chr8_1:6202937-6202956 | Msa1174970:intron | 40.0% | |
| GGACAAAAACCTATTGAGCA+TGG | + | chr8_1:6202997-6203016 | None:intergenic | 40.0% | |
| ! | TGCTCAATAGGTTTTTGTCC+CGG | - | chr8_1:6202997-6203016 | Msa1174970:intron | 40.0% |
| ACCAATGTGCTTTCACAACT+GGG | - | chr8_1:6203066-6203085 | Msa1174970:intron | 40.0% | |
| GAATATGGGAATAATCCCTC+TGG | + | chr8_1:6203159-6203178 | None:intergenic | 40.0% | |
| GCATTAGTACAACAGCAAAG+AGG | + | chr8_1:6203218-6203237 | None:intergenic | 40.0% | |
| AAGCACTCACATTCCAATTG+TGG | + | chr8_1:6203296-6203315 | None:intergenic | 40.0% | |
| TTACAGTGTCAAAGCCAAGA+CGG | - | chr8_1:6203496-6203515 | Msa1174970:intron | 40.0% | |
| TAAACCCAAATGCATGTAGC+TGG | + | chr8_1:6203613-6203632 | None:intergenic | 40.0% | |
| GGGTTGCCAAGTTTAATATG+TGG | + | chr8_1:6203644-6203663 | None:intergenic | 40.0% | |
| ATGATCTTCAACTCACTAGG+GGG | + | chr8_1:6203982-6204001 | None:intergenic | 40.0% | |
| GATGATCTTCAACTCACTAG+GGG | + | chr8_1:6203983-6204002 | None:intergenic | 40.0% | |
| TCTATTGTTGGCATGTGAAG+TGG | + | chr8_1:6204022-6204041 | None:intergenic | 40.0% | |
| TGTGTGTGAGCTTCTATTGT+TGG | + | chr8_1:6204034-6204053 | None:intergenic | 40.0% | |
| TAGAAGTAGAGGTCAATGGA+AGG | - | chr8_1:6204452-6204471 | Msa1174970:intron | 40.0% | |
| TAGGGTTCGAATAAGCTCTT+GGG | + | chr8_1:6204490-6204509 | None:intergenic | 40.0% | |
| ACATGCATAGTTGCTTCCAT+AGG | - | chr8_1:6204601-6204620 | Msa1174970:intron | 40.0% | |
| TTGGACCATGACTTCCAAAA+AGG | + | chr8_1:6204785-6204804 | None:intergenic | 40.0% | |
| CATGGTCCAAATTTAGCAGA+TGG | - | chr8_1:6204795-6204814 | Msa1174970:intron | 40.0% | |
| CAATCCGATGGCAATATTCT+CGG | - | chr8_1:6205396-6205415 | Msa1174970:intron | 40.0% | |
| TTCACCGAGAATATTGCCAT+CGG | + | chr8_1:6205403-6205422 | None:intergenic | 40.0% | |
| GTGAAAGTGACTCTACAACT+AGG | - | chr8_1:6205418-6205437 | Msa1174970:intron | 40.0% | |
| CCACAAGTAGACTTCAATAG+AGG | + | chr8_1:6205507-6205526 | None:intergenic | 40.0% | |
| CCTCTATTGAAGTCTACTTG+TGG | - | chr8_1:6205504-6205523 | Msa1174970:CDS | 40.0% | |
| GAACTTCTATCTGTCAATGC+AGG | - | chr8_1:6205526-6205545 | Msa1174970:CDS | 40.0% | |
| AGGCAAGTTTATGCAGGAAT+GGG | - | chr8_1:6205671-6205690 | Msa1174970:intron | 40.0% | |
| GTGAAGAAGAACTACTTGAC+AGG | - | chr8_1:6205804-6205823 | Msa1174970:CDS | 40.0% | |
| TGTAGTTCCGAGACTTTGTT+TGG | - | chr8_1:6205827-6205846 | Msa1174970:CDS | 40.0% | |
| TTCGCAAAATTGCATGAGAG+CGG | + | chr8_1:6206410-6206429 | None:intergenic | 40.0% | |
| GGAAGACATGAAAAAGAGAG+CGG | - | chr8_1:6206453-6206472 | Msa1174970:CDS | 40.0% | |
| GAAGACATGAAAAAGAGAGC+GGG | - | chr8_1:6206454-6206473 | Msa1174970:CDS | 40.0% | |
| AAGACATGAAAAAGAGAGCG+GGG | - | chr8_1:6206455-6206474 | Msa1174970:CDS | 40.0% | |
| AAAAGGTGATTGCTAAGCTC+TGG | + | chr8_1:6206492-6206511 | None:intergenic | 40.0% | |
| ! | GCACTTGTGATACTGTTTTG+GGG | - | chr8_1:6206626-6206645 | Msa1174970:intron | 40.0% |
| CAAACCCTAACTCAAGAACT+AGG | + | chr8_1:6207326-6207345 | None:intergenic | 40.0% | |
| ! | CTAGTTCTTGAGTTAGGGTT+TGG | - | chr8_1:6207324-6207343 | Msa1174970:intron | 40.0% |
| !! | GCCAATATTGTTGATGGTAC+AGG | - | chr8_1:6207380-6207399 | Msa1174970:intron | 40.0% |
| TGAACTAATAACTGAGGTGC+CGG | - | chr8_1:6207435-6207454 | Msa1174970:intron | 40.0% | |
| AAATGCTAACATGTGCCCTA+AGG | - | chr8_1:6207572-6207591 | Msa1174970:CDS | 40.0% | |
| AATGCTAACATGTGCCCTAA+GGG | - | chr8_1:6207573-6207592 | Msa1174970:CDS | 40.0% | |
| ! | CTTGCTAACTTGTGCCATTA+GGG | + | chr8_1:6207738-6207757 | None:intergenic | 40.0% |
| ! | TCTTGCTAACTTGTGCCATT+AGG | + | chr8_1:6207739-6207758 | None:intergenic | 40.0% |
| !! | CGATCTCTATTTTGTTGTCC+TGG | - | chr8_1:6207939-6207958 | Msa1174970:intron | 40.0% |
| CAAAGCTTATCTGGCTACAT+GGG | - | chr8_1:6208118-6208137 | Msa1174970:CDS | 40.0% | |
| !!! | CATCTTACAAGCTGGTTTTC+CGG | - | chr8_1:6208158-6208177 | Msa1174970:CDS | 40.0% |
| AATGTTCGGGCACTCTTTAA+AGG | - | chr8_1:6208305-6208324 | Msa1174970:CDS | 40.0% | |
| !! | TGTCCTAAGAGCACTCTTTA+AGG | + | chr8_1:6208436-6208455 | None:intergenic | 40.0% |
| TTGCCATACCATCAGATTAC+TGG | + | chr8_1:6208534-6208553 | None:intergenic | 40.0% | |
| TCTGATGGTATGGCAATACA+TGG | - | chr8_1:6208538-6208557 | Msa1174970:CDS | 40.0% | |
| TGGCAATACATGGTGAATGA+TGG | - | chr8_1:6208548-6208567 | Msa1174970:CDS | 40.0% | |
| AGGTAGAAGCTAATCCAAAC+GGG | - | chr8_1:6208759-6208778 | Msa1174970:intron | 40.0% | |
| CTTATTTCCATAAGCCCTCT+AGG | - | chr8_1:6208935-6208954 | Msa1174970:intron | 40.0% | |
| ! | TTTTCTAGGCTGCAACCAAT+TGG | - | chr8_1:6209111-6209130 | Msa1174970:CDS | 40.0% |
| GATATAGGTCAGGAGACATT+AGG | + | chr8_1:6209268-6209287 | None:intergenic | 40.0% | |
| !! | CGGATAAGTTGATATAGGTC+AGG | + | chr8_1:6209278-6209297 | None:intergenic | 40.0% |
| ACTTGCGGCCAGATATAGAA+AGG | + | chr8_1:6201662-6201681 | None:intergenic | 45.0% | |
| CATCTTTGCACTTGTGATCC+TGG | - | chr8_1:6201802-6201821 | Msa1174970:three_prime_UTR | 45.0% | |
| ATTTGGCTGCCATTCCTTAC+TGG | - | chr8_1:6201896-6201915 | Msa1174970:three_prime_UTR | 45.0% | |
| ! | TGGTGCAGGTATTTGAAACG+AGG | - | chr8_1:6202018-6202037 | Msa1174970:CDS | 45.0% |
| GTCTTTGCAGATGCTAGTGA+TGG | - | chr8_1:6202090-6202109 | Msa1174970:intron | 45.0% | |
| CCCAATGCAAATCAGTTCTG+TGG | - | chr8_1:6202116-6202135 | Msa1174970:intron | 45.0% | |
| AAAAGAGAGGGATTGAACCC+CGG | + | chr8_1:6202149-6202168 | None:intergenic | 45.0% | |
| ! | AATCCCTCTCTTTTGGTCTC+AGG | - | chr8_1:6202155-6202174 | Msa1174970:intron | 45.0% |
| CTTCCTGAGACCAAAAGAGA+GGG | + | chr8_1:6202161-6202180 | None:intergenic | 45.0% | |
| GGCCTGTTTGGAAATTGGAT+TGG | + | chr8_1:6202560-6202579 | None:intergenic | 45.0% | |
| GTTCGCAGAATAGTTTCACG+CGG | + | chr8_1:6202855-6202874 | None:intergenic | 45.0% | |
| !! | CTTAACAGCATTGGCGAACT+CGG | + | chr8_1:6202877-6202896 | None:intergenic | 45.0% |
| TGAGTAAGGAGGATTGTCTG+AGG | - | chr8_1:6202913-6202932 | Msa1174970:intron | 45.0% | |
| !! | ATCTGACTTGGCATTCGAGA+CGG | - | chr8_1:6202949-6202968 | Msa1174970:intron | 45.0% |
| ! | GCTCAATAGGTTTTTGTCCC+GGG | - | chr8_1:6202998-6203017 | Msa1174970:intron | 45.0% |
| ! | CAGTTGTGAAAGCACATTGG+TGG | + | chr8_1:6203067-6203086 | None:intergenic | 45.0% |
| CACCAATGTGCTTTCACAAC+TGG | - | chr8_1:6203065-6203084 | Msa1174970:intron | 45.0% | |
| ! | TCCCAGTTGTGAAAGCACAT+TGG | + | chr8_1:6203070-6203089 | None:intergenic | 45.0% |
| GCTTTCACAACTGGGAAAAG+TGG | - | chr8_1:6203074-6203093 | Msa1174970:intron | 45.0% | |
| ATGTTCGCGTTGAATCTGAC+TGG | - | chr8_1:6203099-6203118 | Msa1174970:intron | 45.0% | |
| ACACCAAACATGAGTCCAGA+GGG | - | chr8_1:6203141-6203160 | Msa1174970:intron | 45.0% | |
| AATCCCTCTGGACTCATGTT+TGG | + | chr8_1:6203147-6203166 | None:intergenic | 45.0% | |
| AAAGCCAAGACGGTTCAATC+AGG | - | chr8_1:6203506-6203525 | Msa1174970:intron | 45.0% | |
| CATACTGTGCAACATTGGTG+CGG | + | chr8_1:6203565-6203584 | None:intergenic | 45.0% | |
| TGCAGAACCCCCATATTGAA+AGG | + | chr8_1:6203717-6203736 | None:intergenic | 45.0% | |
| !!! | AAGAGTGCTCCTTTTACGAG+AGG | + | chr8_1:6204261-6204280 | None:intergenic | 45.0% |
| GTAGGGTTCGAATAAGCTCT+TGG | + | chr8_1:6204491-6204510 | None:intergenic | 45.0% | |
| !!! | AGTACTGGTTTTCCCTGTTG+TGG | + | chr8_1:6204735-6204754 | None:intergenic | 45.0% |
| AACAGGGAAAACCAGTACTG+TGG | - | chr8_1:6204736-6204755 | Msa1174970:intron | 45.0% | |
| GAATCAAGCTTCCACAGTAC+TGG | + | chr8_1:6204750-6204769 | None:intergenic | 45.0% | |
| TGAACTAAACTCAGAGCTGC+CGG | + | chr8_1:6205027-6205046 | None:intergenic | 45.0% | |
| CAGGCAAGTTTATGCAGGAA+TGG | - | chr8_1:6205670-6205689 | Msa1174970:intron | 45.0% | |
| AGTTTATGCAGGAATGGGCA+AGG | - | chr8_1:6205676-6205695 | Msa1174970:intron | 45.0% | |
| CTGCTCCAATTTCCTTGATG+TGG | - | chr8_1:6205754-6205773 | Msa1174970:CDS | 45.0% | |
| CCAGTCCACATCAAGGAAAT+TGG | + | chr8_1:6205762-6205781 | None:intergenic | 45.0% | |
| CCAATTTCCTTGATGTGGAC+TGG | - | chr8_1:6205759-6205778 | Msa1174970:CDS | 45.0% | |
| AAGAAAGCCAGTCCACATCA+AGG | + | chr8_1:6205769-6205788 | None:intergenic | 45.0% | |
| !!! | GAACGCAACTTTTGAGGTTC+AGG | + | chr8_1:6206055-6206074 | None:intergenic | 45.0% |
| GAGGCCTAAAGCAACTTCTT+AGG | - | chr8_1:6206245-6206264 | Msa1174970:intron | 45.0% | |
| ! | GTGGCCTAAGAAGTTGCTTT+AGG | + | chr8_1:6206252-6206271 | None:intergenic | 45.0% |
| GATGTGGAATTAGGAGGGAA+TGG | - | chr8_1:6207145-6207164 | Msa1174970:intron | 45.0% | |
| ATAGGTCCAGATTCACTTGC+CGG | + | chr8_1:6207457-6207476 | None:intergenic | 45.0% | |
| ! | AACTTGTGCCATTAGGGCAA+GGG | + | chr8_1:6207732-6207751 | None:intergenic | 45.0% |
| ! | TAACTTGTGCCATTAGGGCA+AGG | + | chr8_1:6207733-6207752 | None:intergenic | 45.0% |
| TCATTGGGCCAAAGCTTATC+TGG | - | chr8_1:6208109-6208128 | Msa1174970:CDS | 45.0% | |
| CCATGTAGCCAGATAAGCTT+TGG | + | chr8_1:6208120-6208139 | None:intergenic | 45.0% | |
| CCAAAGCTTATCTGGCTACA+TGG | - | chr8_1:6208117-6208136 | Msa1174970:CDS | 45.0% | |
| AAGCAATCCTAGAGGGCTTA+TGG | + | chr8_1:6208945-6208964 | None:intergenic | 45.0% | |
| AAGCAAATAGCAGTGGCAGA+AGG | - | chr8_1:6209354-6209373 | Msa1174970:intron | 45.0% | |
| ! | TTTTGTGCCTCCCTCCAATT+AGG | - | chr8_1:6209471-6209490 | Msa1174970:intron | 45.0% |
| TACTGTACCTAATTGGAGGG+AGG | + | chr8_1:6209481-6209500 | None:intergenic | 45.0% | |
| TTACCATTGCTAGGCGCTCA+CGG | - | chr8_1:6201691-6201710 | Msa1174970:three_prime_UTR | 50.0% | |
| TCAGTTCTGTGGTGCAGATC+CGG | - | chr8_1:6202127-6202146 | Msa1174970:intron | 50.0% | |
| ! | GGGGTTCAATCCCTCTCTTT+TGG | - | chr8_1:6202148-6202167 | Msa1174970:intron | 50.0% |
| GCTTCCTGAGACCAAAAGAG+AGG | + | chr8_1:6202162-6202181 | None:intergenic | 50.0% | |
| !! | GGACTCATGTTTGGTGTCAC+TGG | + | chr8_1:6203138-6203157 | None:intergenic | 50.0% |
| GACACCAAACATGAGTCCAG+AGG | - | chr8_1:6203140-6203159 | Msa1174970:intron | 50.0% | |
| CCAATTGTGGTTGCCACAGA+TGG | + | chr8_1:6203283-6203302 | None:intergenic | 50.0% | |
| CCATCTGTGGCAACCACAAT+TGG | - | chr8_1:6203280-6203299 | Msa1174970:intron | 50.0% | |
| GACGCCAGCTACATGCATTT+GGG | - | chr8_1:6203606-6203625 | Msa1174970:intron | 50.0% | |
| ACTTGGCAACCCTTTGGCAA+AGG | - | chr8_1:6203652-6203671 | Msa1174970:intron | 50.0% | |
| AAAGGCTAATGTGTCGCCCA+TGG | + | chr8_1:6203699-6203718 | None:intergenic | 50.0% | |
| TAGAGGTCAATGGAAGGCAG+CGG | - | chr8_1:6204458-6204477 | Msa1174970:intron | 50.0% | |
| TATTTCGATCTGTCCGCAGC+CGG | - | chr8_1:6205005-6205024 | Msa1174970:intron | 50.0% | |
| TCAGATGAGTACGGACAGTC+TGG | + | chr8_1:6205456-6205475 | None:intergenic | 50.0% | |
| GCTGGAACCGCTTCTCATTT+AGG | + | chr8_1:6205887-6205906 | None:intergenic | 50.0% | |
| TCACAGCCAGCACAAGCATT+AGG | + | chr8_1:6206274-6206293 | None:intergenic | 50.0% | |
| ! | ACTGCTGGCTAGGCAACAAA+AGG | + | chr8_1:6206509-6206528 | None:intergenic | 50.0% |
| TTGCCTAGCCAGCAGTACAT+CGG | - | chr8_1:6206513-6206532 | Msa1174970:CDS | 50.0% | |
| ! | TAGGGCAAGGGCACATGTTA+AGG | + | chr8_1:6207720-6207739 | None:intergenic | 50.0% |
| AACATGTGCCCTTGCCCTAA+TGG | - | chr8_1:6207721-6207740 | Msa1174970:CDS | 50.0% | |
| ATGGGTGACTCTTAACACCC+AGG | + | chr8_1:6207960-6207979 | None:intergenic | 50.0% | |
| GGGTGTTAAGAGTCACCCAT+TGG | - | chr8_1:6207960-6207979 | Msa1174970:intron | 50.0% | |
| CGGGGCATATCTCATCCAAT+GGG | + | chr8_1:6207978-6207997 | None:intergenic | 50.0% | |
| TCGGGGCATATCTCATCCAA+TGG | + | chr8_1:6207979-6207998 | None:intergenic | 50.0% | |
| CAGTTCTGTGGTGCAGATCC+GGG | - | chr8_1:6202128-6202147 | Msa1174970:intron | 55.0% | |
| AGTTCTGTGGTGCAGATCCG+GGG | - | chr8_1:6202129-6202148 | Msa1174970:intron | 55.0% | |
| GACGCCTGATTGAACCGTCT+TGG | + | chr8_1:6203513-6203532 | None:intergenic | 55.0% | |
| CGGTTCAATCAGGCGTCTTG+AGG | - | chr8_1:6203516-6203535 | Msa1174970:intron | 55.0% | |
| GCTTATGGACTCGTCGCACT+AGG | - | chr8_1:6203584-6203603 | Msa1174970:intron | 55.0% | |
| GGACGCCAGCTACATGCATT+TGG | - | chr8_1:6203605-6203624 | Msa1174970:intron | 55.0% | |
| GGGCATTTCCAGCCACAACA+GGG | - | chr8_1:6204720-6204739 | Msa1174970:intron | 55.0% | |
| !! | CTGGTTTTCCCTGTTGTGGC+TGG | + | chr8_1:6204731-6204750 | None:intergenic | 55.0% |
| AGGCCACCTAATGCTTGTGC+TGG | - | chr8_1:6206265-6206284 | Msa1174970:intron | 55.0% | |
| CAGCCAGCACAAGCATTAGG+TGG | + | chr8_1:6206271-6206290 | None:intergenic | 55.0% | |
| TGCCTAGCCAGCAGTACATC+GGG | - | chr8_1:6206514-6206533 | Msa1174970:CDS | 55.0% | |
| ! | TTCCCGATGTACTGCTGGCT+AGG | + | chr8_1:6206519-6206538 | None:intergenic | 55.0% |
| AAGGCTTCCCGATGTACTGC+TGG | + | chr8_1:6206524-6206543 | None:intergenic | 55.0% | |
| GGGTTCTGCAGCGCACAACA+AGG | - | chr8_1:6203727-6203746 | Msa1174970:intron | 60.0% | |
| ! | GGGGCATTTCCAGCCACAAC+AGG | - | chr8_1:6204719-6204738 | Msa1174970:intron | 60.0% |
| ! | AAACTCAGAGCTGCCGGCTG+CGG | + | chr8_1:6205021-6205040 | None:intergenic | 60.0% |
| !! | GAGGTGCCGGCAAGTGAATC+TGG | - | chr8_1:6207448-6207467 | Msa1174970:intron | 60.0% |
| GTGCCGTGAGCGCCTAGCAA+TGG | + | chr8_1:6201697-6201716 | None:intergenic | 65.0% | |
| AGGCGCTCACGGCACTATGC+TGG | - | chr8_1:6201702-6201721 | Msa1174970:three_prime_UTR | 65.0% | |
| GGCGCTCACGGCACTATGCT+GGG | - | chr8_1:6201703-6201722 | Msa1174970:three_prime_UTR | 65.0% | |
| CACGGCACTATGCTGGGACC+AGG | - | chr8_1:6201709-6201728 | Msa1174970:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 6201654 | 6209604 | 6201654 | ID=Msa1174970;Name=Msa1174970 |
| chr8_1 | mRNA | 6201654 | 6209604 | 6201654 | ID=Msa1174970-mRNA-1;Parent=Msa1174970;Name=Msa1174970-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.75|0.61|1|0.83|0.76|13|347|565 |
| chr8_1 | exon | 6201654 | 6202093 | 6201654 | ID=Msa1174970-mRNA-1:exon:2177;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6203775 | 6203856 | 6203775 | ID=Msa1174970-mRNA-1:exon:2176;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6205433 | 6205585 | 6205433 | ID=Msa1174970-mRNA-1:exon:2175;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6205711 | 6205881 | 6205711 | ID=Msa1174970-mRNA-1:exon:2174;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6206432 | 6206545 | 6206432 | ID=Msa1174970-mRNA-1:exon:2173;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6206693 | 6206814 | 6206693 | ID=Msa1174970-mRNA-1:exon:2172;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6207510 | 6207677 | 6207510 | ID=Msa1174970-mRNA-1:exon:2171;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6207687 | 6207879 | 6207687 | ID=Msa1174970-mRNA-1:exon:2170;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6208071 | 6208202 | 6208071 | ID=Msa1174970-mRNA-1:exon:2169;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6208288 | 6208421 | 6208288 | ID=Msa1174970-mRNA-1:exon:2168;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6208532 | 6208602 | 6208532 | ID=Msa1174970-mRNA-1:exon:2167;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6209045 | 6209232 | 6209045 | ID=Msa1174970-mRNA-1:exon:2166;Parent=Msa1174970-mRNA-1 |
| chr8_1 | exon | 6209528 | 6209604 | 6209528 | ID=Msa1174970-mRNA-1:exon:2165;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6209528 | 6209604 | 6209528 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6209045 | 6209232 | 6209045 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6208532 | 6208602 | 6208532 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6208288 | 6208421 | 6208288 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6208071 | 6208202 | 6208071 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6207687 | 6207879 | 6207687 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6207510 | 6207677 | 6207510 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6206693 | 6206814 | 6206693 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6206432 | 6206545 | 6206432 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6205711 | 6205881 | 6205711 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6205433 | 6205585 | 6205433 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6203775 | 6203856 | 6203775 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | CDS | 6202001 | 6202093 | 6202001 | ID=Msa1174970-mRNA-1:cds;Parent=Msa1174970-mRNA-1 |
| chr8_1 | three_prime_UTR | 6201654 | 6202000 | 6201654 | ID=Msa1174970-mRNA-1:three_prime_utr;Parent=Msa1174970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
