Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1315350 | sp|Q94A27|SAC2_ARATH | 52.103 | 856 | 304 | 12 | 26 | 842 | 12 | 800 | 0.0 | 820 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1315350 | A0A396GEB7 | 91.238 | 856 | 30 | 4 | 1 | 850 | 1 | 817 | 0.0 | 1568 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1234670 | Msa1315350 | 0.951962 | 6.723304e-110 | -8.615850e-47 |
Msa1276940 | Msa1315350 | 0.955694 | 1.680355e-113 | -8.615850e-47 |
Msa1314750 | Msa1315350 | 0.806778 | 6.971936e-50 | -8.615850e-47 |
Msa1174580 | Msa1315350 | 0.808484 | 3.027174e-50 | -8.615850e-47 |
Msa1174970 | Msa1315350 | 0.892359 | 1.706797e-74 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1315350 | MtrunA17_Chr8g0344911 | 91.238 | 856 | 30 | 4 | 1 | 850 | 1 | 817 | 0.0 | 1568 |
Msa1315350 | MtrunA17_Chr4g0069981 | 56.157 | 869 | 281 | 15 | 28 | 848 | 21 | 837 | 0.0 | 908 |
Msa1315350 | MtrunA17_Chr4g0014511 | 44.608 | 816 | 359 | 14 | 33 | 804 | 42 | 808 | 0.0 | 645 |
Msa1315350 | MtrunA17_Chr5g0406801 | 28.155 | 309 | 171 | 9 | 104 | 408 | 63 | 324 | 4.47e-22 | 101 |
Msa1315350 | MtrunA17_Chr5g0406801 | 37.984 | 129 | 78 | 2 | 531 | 658 | 389 | 516 | 2.92e-14 | 76.6 |
Msa1315350 | MtrunA17_Chr4g0045791 | 29.231 | 195 | 117 | 5 | 250 | 426 | 179 | 370 | 2.83e-14 | 77.4 |
Msa1315350 | MtrunA17_Chr7g0242661 | 29.927 | 137 | 94 | 2 | 531 | 666 | 196 | 331 | 3.68e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1315350 | AT3G14205.1 | 52.103 | 856 | 304 | 12 | 26 | 842 | 12 | 800 | 0.0 | 820 |
Msa1315350 | AT5G20840.1 | 50.640 | 859 | 328 | 15 | 33 | 848 | 24 | 829 | 0.0 | 779 |
Msa1315350 | AT3G43220.1 | 49.536 | 862 | 329 | 15 | 33 | 848 | 15 | 816 | 0.0 | 756 |
Msa1315350 | AT3G43220.3 | 49.249 | 865 | 322 | 15 | 33 | 848 | 15 | 811 | 0.0 | 752 |
Msa1315350 | AT3G43220.2 | 55.797 | 690 | 226 | 9 | 33 | 701 | 15 | 646 | 0.0 | 722 |
Msa1315350 | AT1G22620.1 | 50.522 | 671 | 262 | 10 | 33 | 683 | 34 | 654 | 0.0 | 646 |
Msa1315350 | AT1G17340.1 | 49.115 | 678 | 274 | 9 | 33 | 702 | 19 | 633 | 0.0 | 617 |
Msa1315350 | AT3G14205.2 | 51.682 | 654 | 248 | 11 | 228 | 842 | 1 | 625 | 0.0 | 598 |
Msa1315350 | AT3G51830.1 | 23.010 | 578 | 327 | 17 | 93 | 660 | 50 | 519 | 1.12e-29 | 125 |
Msa1315350 | AT5G66020.1 | 25.305 | 328 | 186 | 8 | 104 | 424 | 59 | 334 | 6.64e-23 | 104 |
Msa1315350 | AT5G66020.1 | 37.398 | 123 | 75 | 2 | 531 | 652 | 386 | 507 | 2.32e-13 | 74.3 |
Msa1315350 | AT3G51460.1 | 26.154 | 325 | 186 | 10 | 104 | 424 | 62 | 336 | 6.04e-22 | 101 |
Msa1315350 | AT3G51460.1 | 36.585 | 123 | 76 | 2 | 531 | 652 | 388 | 509 | 6.48e-13 | 72.8 |
Msa1315350 | AT3G59770.1 | 28.718 | 195 | 118 | 5 | 250 | 426 | 181 | 372 | 8.66e-16 | 82.8 |
Msa1315350 | AT3G59770.3 | 28.718 | 195 | 118 | 5 | 250 | 426 | 181 | 372 | 8.68e-16 | 82.8 |
Msa1315350 | AT3G59770.4 | 28.402 | 169 | 101 | 4 | 276 | 426 | 3 | 169 | 9.23e-13 | 73.2 |
Msa1315350 | AT3G59770.2 | 29.530 | 149 | 86 | 3 | 295 | 426 | 1 | 147 | 1.02e-12 | 72.8 |
Find 199 sgRNAs with CRISPR-Local
Find 673 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATTCCATCTGCTAAATT+TGG | 0.146934 | 8_4:+14697379 | None:intergenic |
ATACTGAAAGCTTTGAAAAT+TGG | 0.147538 | 8_4:-14692975 | Msa1315350:CDS |
TTCAAGTGTGCGATCAAATT+TGG | 0.181811 | 8_4:-14701796 | Msa1315350:CDS |
ATCAAGTTCAGTATAATAAT+TGG | 0.185083 | 8_4:+14699477 | None:intergenic |
GACACATTAGCCTTTCAATA+TGG | 0.211695 | 8_4:-14698476 | Msa1315350:CDS |
TGGACTGTTGCCTTAGTCTA+TGG | 0.221556 | 8_4:-14700867 | Msa1315350:CDS |
TGCTTGATACTGTACCTAAT+TGG | 0.234689 | 8_4:+14692694 | None:intergenic |
TCCAAAAGAGATTGCTTATC+AGG | 0.251218 | 8_4:+14696700 | None:intergenic |
TCCTGATAAGCAATCTCTTT+TGG | 0.253320 | 8_4:-14696701 | Msa1315350:CDS |
ACTTACTCAGAAAAGGAATA+TGG | 0.268444 | 8_4:+14699006 | None:intergenic |
TACTGAAAGCTTTGAAAATT+GGG | 0.269078 | 8_4:-14692974 | Msa1315350:CDS |
TATATGAAACACTGTTTGTT+TGG | 0.269818 | 8_4:-14700938 | Msa1315350:CDS |
CCAGTCCACATCAAGGAAAT+TGG | 0.290418 | 8_4:+14696421 | None:intergenic |
TATTATACTGAACTTGATTA+AGG | 0.305053 | 8_4:-14699472 | Msa1315350:intron |
GAGAATCTTGTCATGAGATA+TGG | 0.308963 | 8_4:-14699504 | Msa1315350:CDS |
TTGGACCATGACTTCCAAAA+AGG | 0.315276 | 8_4:+14697398 | None:intergenic |
AGGCGCTCACGGCACTATGC+TGG | 0.316310 | 8_4:-14700475 | Msa1315350:CDS |
CACCAATGTGCTTTCACAAC+TGG | 0.330680 | 8_4:-14699112 | Msa1315350:CDS |
AGTCTTCAAAAGAACTTATC+TGG | 0.334802 | 8_4:-14700984 | Msa1315350:CDS |
GGGGTTCAATCCCTCTCTTT+TGG | 0.336187 | 8_4:-14700029 | Msa1315350:CDS |
GGACGCCAGCTACATGCATT+TGG | 0.338791 | 8_4:-14698575 | Msa1315350:CDS |
TAGGTTAACCTTTCTATATC+TGG | 0.339638 | 8_4:-14700526 | Msa1315350:CDS |
CTTTGCTGTACAGAAATAAA+TGG | 0.340460 | 8_4:-14692864 | Msa1315350:three_prime_UTR |
GCTTGATACTGTACCTAATT+GGG | 0.346525 | 8_4:+14692695 | None:intergenic |
GCTGATAAGGAAACAGAAAA+TGG | 0.350899 | 8_4:-14698743 | Msa1315350:CDS |
TCAGTTCTGTGGTGCAGATC+CGG | 0.364139 | 8_4:-14700050 | Msa1315350:CDS |
TGAATCTGGACCTATCTTAA+AGG | 0.365639 | 8_4:-14694718 | Msa1315350:intron |
CGCACACTTGAATGTGGAAT+TGG | 0.369716 | 8_4:+14701807 | None:intergenic |
CAACAGTCCAGGAAGTATTC+TGG | 0.370306 | 8_4:+14700880 | None:intergenic |
GAGGTGCCGGCAAGTGAATC+TGG | 0.372008 | 8_4:-14694732 | Msa1315350:CDS |
CAAGAAGTTTCTATGCAGTA+TGG | 0.374428 | 8_4:-14701054 | Msa1315350:CDS |
CCAATTTCCTTGATGTGGAC+TGG | 0.383314 | 8_4:-14696421 | Msa1315350:CDS |
GGGGCATTTCCAGCCACAAC+AGG | 0.392246 | 8_4:-14697461 | Msa1315350:CDS |
GACGCCAGCTACATGCATTT+GGG | 0.393314 | 8_4:-14698574 | Msa1315350:CDS |
ACACATTAGCCTTTCAATAT+GGG | 0.394386 | 8_4:-14698475 | Msa1315350:CDS |
GGTCTTAAAGATTGACAGAT+TGG | 0.396654 | 8_4:-14702214 | Msa1315350:CDS |
GTAATAAGCAGCATGTAGTA+TGG | 0.398368 | 8_4:+14701897 | None:intergenic |
AGTTCTTAACTCGTGGAATC+AGG | 0.401648 | 8_4:-14700911 | Msa1315350:CDS |
GCTCAGAGATTCTATATGAT+TGG | 0.401655 | 8_4:-14702264 | Msa1315350:intron |
CCACAGAACTGATTTGCATT+GGG | 0.409148 | 8_4:+14700061 | None:intergenic |
TTTGCTACATGCAGAAGTTT+AGG | 0.409804 | 8_4:-14703871 | Msa1315350:CDS |
TCAAGTTCAGTATAATAATT+GGG | 0.410610 | 8_4:+14699478 | None:intergenic |
GGACTCATGTTTGGTGTCAC+TGG | 0.418382 | 8_4:+14699042 | None:intergenic |
GCTGGTGTTGAAGTTGGTGC+TGG | 0.420803 | 8_4:-14703920 | Msa1315350:CDS |
CAGTTCTGTGGTGCAGATCC+GGG | 0.421189 | 8_4:-14700049 | Msa1315350:CDS |
AATCCCTCTGGACTCATGTT+TGG | 0.422679 | 8_4:+14699033 | None:intergenic |
TATTAATAAAACTTTGAGTA+AGG | 0.424613 | 8_4:-14699278 | Msa1315350:CDS |
AATTTAGCAGATGGAATTGA+TGG | 0.425095 | 8_4:-14697376 | Msa1315350:CDS |
TCAGATGAGTACGGACAGTC+TGG | 0.425148 | 8_4:+14696727 | None:intergenic |
ATAATCTCCAGAATACTTCC+TGG | 0.425618 | 8_4:-14700887 | Msa1315350:CDS |
ATGTCAGGTTTCATATTCAA+TGG | 0.429541 | 8_4:+14699991 | None:intergenic |
ATAGGTCCAGATTCACTTGC+CGG | 0.430491 | 8_4:+14694726 | None:intergenic |
TTTAAACCTTAGTTTGGGTC+TGG | 0.436286 | 8_4:-14692600 | Msa1315350:three_prime_UTR |
TTATTACAACAATACATATA+CGG | 0.440751 | 8_4:-14697665 | Msa1315350:CDS |
AGCTCAAAACTTTACATCAA+TGG | 0.447201 | 8_4:+14704146 | None:intergenic |
GAATCAAGCTTCCACAGTAC+TGG | 0.448668 | 8_4:+14697433 | None:intergenic |
AATGTTGCACAGTATGCTTA+TGG | 0.455792 | 8_4:-14698611 | Msa1315350:CDS |
TATTAAACTTGGCAACCCTT+TGG | 0.458278 | 8_4:-14698534 | Msa1315350:CDS |
CTTACTCAGAAAAGGAATAT+GGG | 0.464241 | 8_4:+14699007 | None:intergenic |
AATGAAAGTTTATGAGTCCA+TGG | 0.465884 | 8_4:-14698501 | Msa1315350:CDS |
GATATAGGTCAGGAGACATT+AGG | 0.466832 | 8_4:+14692915 | None:intergenic |
CAATCCGATGGCAATATTCT+CGG | 0.471072 | 8_4:-14696784 | Msa1315350:CDS |
TTATGGTACTTACTCAGAAA+AGG | 0.471405 | 8_4:+14698999 | None:intergenic |
CAGGCAAGTTTATGCAGGAA+TGG | 0.478598 | 8_4:-14696510 | Msa1315350:CDS |
AGTCATGAATTCTCATCCTT+CGG | 0.480296 | 8_4:+14692885 | None:intergenic |
AAATTTGTTACAACTTGCTA+TGG | 0.480675 | 8_4:-14702084 | Msa1315350:CDS |
TAGGCTCTATGAAACTTCTC+AGG | 0.480764 | 8_4:-14703852 | Msa1315350:intron |
TTTCTAGAAGTAGAGGTCAA+TGG | 0.482402 | 8_4:-14697732 | Msa1315350:CDS |
TATTGTTGTAATAACGCTGT+AGG | 0.483851 | 8_4:+14697674 | None:intergenic |
ATTAATAGACTTAACAGCAT+TGG | 0.484492 | 8_4:+14699294 | None:intergenic |
GTAGGGTTCGAATAAGCTCT+TGG | 0.486430 | 8_4:+14697692 | None:intergenic |
GAATCCCCACATATTAAACT+TGG | 0.486919 | 8_4:-14698545 | Msa1315350:CDS |
TTCATTAAATCCTTTGCCAA+AGG | 0.487276 | 8_4:+14698518 | None:intergenic |
ACCAATGTGCTTTCACAACT+GGG | 0.489522 | 8_4:-14699111 | Msa1315350:CDS |
ACCACAGAACTGATTTGCAT+TGG | 0.490668 | 8_4:+14700060 | None:intergenic |
AAAGCCAAGACGGTTCAATC+AGG | 0.493324 | 8_4:-14698674 | Msa1315350:CDS |
AGGAAGATCGGCACAATATG+TGG | 0.493549 | 8_4:-14701867 | Msa1315350:CDS |
AATTAAATTATATACATGAA+TGG | 0.495549 | 8_4:+14692661 | None:intergenic |
TCATTAAATCCTTTGCCAAA+GGG | 0.496371 | 8_4:+14698519 | None:intergenic |
AGTCTTGTGGCTTCAAACAT+TGG | 0.496716 | 8_4:+14699534 | None:intergenic |
CTTAACAGCATTGGCGAACT+CGG | 0.498542 | 8_4:+14699303 | None:intergenic |
CGGATAAGTTGATATAGGTC+AGG | 0.499063 | 8_4:+14692905 | None:intergenic |
TTTGAAAATTGGGTTACTCA+TGG | 0.502111 | 8_4:-14692964 | Msa1315350:CDS |
TATATACTGACCTTTAAGAT+AGG | 0.502188 | 8_4:+14694708 | None:intergenic |
AGGCAAGTTTATGCAGGAAT+GGG | 0.504128 | 8_4:-14696509 | Msa1315350:CDS |
GAAACGAGGAGTCAATGAAA+GGG | 0.506357 | 8_4:-14700145 | Msa1315350:CDS |
TATATCGTACATATAATGTC+AGG | 0.506653 | 8_4:+14699976 | None:intergenic |
CACATTAGCCTTTCAATATG+GGG | 0.510110 | 8_4:-14698474 | Msa1315350:CDS |
GAATATGGGAATAATCCCTC+TGG | 0.512618 | 8_4:+14699021 | None:intergenic |
GGAGATTGAAGAAGAGAAGG+TGG | 0.516279 | 8_4:-14703954 | Msa1315350:CDS |
GCTTATGGACTCGTCGCACT+AGG | 0.517099 | 8_4:-14698596 | Msa1315350:CDS |
CTGCTCCAATTTCCTTGATG+TGG | 0.517591 | 8_4:-14696426 | Msa1315350:CDS |
TAGGGTTCGAATAAGCTCTT+GGG | 0.519595 | 8_4:+14697693 | None:intergenic |
GAGATTGAAGAAGAGAAGGT+GGG | 0.520849 | 8_4:-14703953 | Msa1315350:CDS |
CCACAAGTAGACTTCAATAG+AGG | 0.523606 | 8_4:+14696676 | None:intergenic |
TAATAAAACTTTGAGTAAGG+AGG | 0.524239 | 8_4:-14699275 | Msa1315350:CDS |
TAAACCCAAATGCATGTAGC+TGG | 0.525363 | 8_4:+14698570 | None:intergenic |
GGGTTGCCAAGTTTAATATG+TGG | 0.528032 | 8_4:+14698539 | None:intergenic |
TACAACAATACATATACGGA+CGG | 0.528782 | 8_4:-14697661 | Msa1315350:CDS |
ATTACAAAGCGGAGGAAGAT+CGG | 0.531117 | 8_4:-14701879 | Msa1315350:CDS |
ACTTGGCAACCCTTTGGCAA+AGG | 0.532622 | 8_4:-14698528 | Msa1315350:CDS |
CAGTTGTGAAAGCACATTGG+TGG | 0.534453 | 8_4:+14699113 | None:intergenic |
TTCATTCACAATATTGTCTG+AGG | 0.534573 | 8_4:+14694764 | None:intergenic |
TTATACAGGCAAGTTTATGC+AGG | 0.534777 | 8_4:-14696515 | Msa1315350:intron |
TCCTTCGGATAAGTTGATAT+AGG | 0.535865 | 8_4:+14692900 | None:intergenic |
TGAAATGCTGAAGCGTCTAC+AGG | 0.535888 | 8_4:-14702133 | Msa1315350:CDS |
CGACCGCCAGACCCAAACTA+AGG | 0.536113 | 8_4:+14692594 | None:intergenic |
GCGTCTACAGGATGGAAACT+TGG | 0.538498 | 8_4:-14702121 | Msa1315350:CDS |
GTGAAGAAGAACTACTTGAC+AGG | 0.539008 | 8_4:-14696376 | Msa1315350:intron |
TGAACTAATAACTGAGGTGC+CGG | 0.541042 | 8_4:-14694745 | Msa1315350:CDS |
CATGGTCCAAATTTAGCAGA+TGG | 0.542233 | 8_4:-14697385 | Msa1315350:CDS |
GGTTGCCAAGTTTAATATGT+GGG | 0.543042 | 8_4:+14698540 | None:intergenic |
AGTGCTGCTGGTGTTGAAGT+TGG | 0.547360 | 8_4:-14703926 | Msa1315350:CDS |
ATAGACTAAGGCAACAGTCC+AGG | 0.549517 | 8_4:+14700869 | None:intergenic |
GATGGAGATTGAAGAAGAGA+AGG | 0.551345 | 8_4:-14703957 | Msa1315350:CDS |
GTCTTTGCAGATGCTAGTGA+TGG | 0.554035 | 8_4:-14700087 | Msa1315350:CDS |
TTGACTTGATTACCATTGCT+AGG | 0.555440 | 8_4:-14700495 | Msa1315350:CDS |
TGAAACGAGGAGTCAATGAA+AGG | 0.555782 | 8_4:-14700146 | Msa1315350:CDS |
ATGAAAGTTTATGAGTCCAT+GGG | 0.555783 | 8_4:-14698500 | Msa1315350:CDS |
AGGGATCTGAATTGTGATGA+TGG | 0.556554 | 8_4:-14703975 | Msa1315350:exon |
GCTTTCACAACTGGGAAAAG+TGG | 0.557872 | 8_4:-14699103 | Msa1315350:CDS |
AGATTGAAGAAGAGAAGGTG+GGG | 0.558991 | 8_4:-14703952 | Msa1315350:CDS |
CTTAGTTTGGGTCTGGCGGT+CGG | 0.559001 | 8_4:-14692593 | Msa1315350:three_prime_UTR |
GATGAATTTCTTGTTGAGCA+AGG | 0.559740 | 8_4:-14698785 | Msa1315350:CDS |
ATTCTCAAAATGAAGTCTTG+TGG | 0.560519 | 8_4:+14699521 | None:intergenic |
TTTGATCGCACACTTGAATG+TGG | 0.561611 | 8_4:+14701801 | None:intergenic |
ACTTGCGGCCAGATATAGAA+AGG | 0.562076 | 8_4:+14700518 | None:intergenic |
ATTGTTGTAATAACGCTGTA+GGG | 0.562688 | 8_4:+14697675 | None:intergenic |
GAACTTCTATCTGTCAATGC+AGG | 0.564220 | 8_4:-14696654 | Msa1315350:intron |
CTTGATACTGTACCTAATTG+GGG | 0.567672 | 8_4:+14692696 | None:intergenic |
AAAGGCTAATGTGTCGCCCA+TGG | 0.569063 | 8_4:+14698484 | None:intergenic |
AAGGTGGGGACAAGTGCTGC+TGG | 0.571459 | 8_4:-14703938 | Msa1315350:CDS |
ACCTATATCAACTTATCCGA+AGG | 0.575997 | 8_4:-14692901 | Msa1315350:three_prime_UTR |
GTGCCGTGAGCGCCTAGCAA+TGG | 0.576081 | 8_4:+14700483 | None:intergenic |
AGGTTTCATATTCAATGGAG+AGG | 0.578082 | 8_4:+14699996 | None:intergenic |
ATAAGCATACTGTGCAACAT+TGG | 0.579135 | 8_4:+14698613 | None:intergenic |
ACAACAATACATATACGGAC+GGG | 0.579913 | 8_4:-14697660 | Msa1315350:CDS |
AAGAAAGCCAGTCCACATCA+AGG | 0.580107 | 8_4:+14696414 | None:intergenic |
ACAACTTGCTATGGAATCAT+CGG | 0.580415 | 8_4:-14702075 | Msa1315350:intron |
AAACCTTAGTTTGGGTCTGG+CGG | 0.582020 | 8_4:-14692597 | Msa1315350:three_prime_UTR |
CGGTTCAATCAGGCGTCTTG+AGG | 0.583992 | 8_4:-14698664 | Msa1315350:CDS |
TTATCTGGTCATAATGTCAC+GGG | 0.584534 | 8_4:-14700969 | Msa1315350:CDS |
TTCACCGAGAATATTGCCAT+CGG | 0.585090 | 8_4:+14696780 | None:intergenic |
ATTAACAACTTTCAGCAGCA+AGG | 0.585777 | 8_4:-14699136 | Msa1315350:CDS |
CACAGAACTGATTTGCATTG+GGG | 0.592102 | 8_4:+14700062 | None:intergenic |
TGGAACGAGTTCTTAACTCG+TGG | 0.592450 | 8_4:-14700918 | Msa1315350:CDS |
ATGCTGAAGCGTCTACAGGA+TGG | 0.593299 | 8_4:-14702129 | Msa1315350:CDS |
TTCAGTGCGTATGCACAATG+TGG | 0.593906 | 8_4:-14701494 | Msa1315350:intron |
GATGCACATAAGATGAGGAC+TGG | 0.595284 | 8_4:+14692570 | None:intergenic |
AAGATGAGAGGGTTGACTTG+AGG | 0.597280 | 8_4:+14701467 | None:intergenic |
CTTATCTGGTCATAATGTCA+CGG | 0.598724 | 8_4:-14700970 | Msa1315350:CDS |
CAGGATGGAAACTTGGCCAC+AGG | 0.599825 | 8_4:-14702114 | Msa1315350:CDS |
GAGTACCACAGAAAGATGAG+AGG | 0.604000 | 8_4:+14701455 | None:intergenic |
GATACAAAAGCAAATAGCAG+TGG | 0.605071 | 8_4:-14692833 | Msa1315350:three_prime_UTR |
ATGTTCGCGTTGAATCTGAC+TGG | 0.605772 | 8_4:-14699078 | Msa1315350:CDS |
GATGGAAACTTGGCCACAGG+AGG | 0.606318 | 8_4:-14702111 | Msa1315350:CDS |
GTTGCCAAGTTTAATATGTG+GGG | 0.606826 | 8_4:+14698541 | None:intergenic |
AACAAATTTAAGCCCTCCTG+TGG | 0.608055 | 8_4:+14702098 | None:intergenic |
ATTTAGCAGATGGAATTGAT+GGG | 0.608558 | 8_4:-14697375 | Msa1315350:intron |
CCTCTATTGAAGTCTACTTG+TGG | 0.609343 | 8_4:-14696676 | Msa1315350:CDS |
TAGAGGTCAATGGAAGGCAG+CGG | 0.610698 | 8_4:-14697722 | Msa1315350:CDS |
AATGGTTATTACAGTTGTGA+TGG | 0.613237 | 8_4:-14698719 | Msa1315350:CDS |
CCCAATGCAAATCAGTTCTG+TGG | 0.613475 | 8_4:-14700061 | Msa1315350:CDS |
AAGCAAATAGCAGTGGCAGA+AGG | 0.616665 | 8_4:-14692826 | Msa1315350:three_prime_UTR |
ACATTAGCCTTTCAATATGG+GGG | 0.616794 | 8_4:-14698473 | Msa1315350:CDS |
AGTACCACAGAAAGATGAGA+GGG | 0.619650 | 8_4:+14701456 | None:intergenic |
AAAAGAGAGGGATTGAACCC+CGG | 0.619852 | 8_4:+14700031 | None:intergenic |
AAGGAAACAGAAAATGGCAA+TGG | 0.620301 | 8_4:-14698737 | Msa1315350:CDS |
TCCCAGTTGTGAAAGCACAT+TGG | 0.620901 | 8_4:+14699110 | None:intergenic |
AGTTTATGCAGGAATGGGCA+AGG | 0.620967 | 8_4:-14696504 | Msa1315350:CDS |
AGTTCTGTGGTGCAGATCCG+GGG | 0.622116 | 8_4:-14700048 | Msa1315350:CDS |
GTGAAAGTGACTCTACAACT+AGG | 0.625184 | 8_4:-14696762 | Msa1315350:CDS |
CTTCCTGAGACCAAAAGAGA+GGG | 0.626552 | 8_4:+14700019 | None:intergenic |
TAGAAGTAGAGGTCAATGGA+AGG | 0.628077 | 8_4:-14697728 | Msa1315350:CDS |
TCAGTGCGTATGCACAATGT+GGG | 0.628859 | 8_4:-14701493 | Msa1315350:intron |
GCTTCCTGAGACCAAAAGAG+AGG | 0.637321 | 8_4:+14700018 | None:intergenic |
ACACCAAACATGAGTCCAGA+GGG | 0.639541 | 8_4:-14699036 | Msa1315350:CDS |
TGGTGCAGGTATTTGAAACG+AGG | 0.645473 | 8_4:-14700159 | Msa1315350:intron |
ATTAGAAGATCACAATCCGA+TGG | 0.647469 | 8_4:-14696796 | Msa1315350:CDS |
GGGTTCTGCAGCGCACAACA+AGG | 0.652377 | 8_4:-14698453 | Msa1315350:intron |
ATGCAGTATGGATCTTACAA+AGG | 0.656804 | 8_4:-14701042 | Msa1315350:CDS |
TCAACCCTCTCATCTTTCTG+TGG | 0.657917 | 8_4:-14701460 | Msa1315350:CDS |
ATGGAAACTTGGCCACAGGA+GGG | 0.658115 | 8_4:-14702110 | Msa1315350:CDS |
GGGCATTTCCAGCCACAACA+GGG | 0.658755 | 8_4:-14697460 | Msa1315350:CDS |
TTGATACTGTACCTAATTGG+GGG | 0.661403 | 8_4:+14692697 | None:intergenic |
TGGTAATCAAGTCAAACTTG+CGG | 0.663201 | 8_4:+14700503 | None:intergenic |
TGATACTGTACCTAATTGGG+GGG | 0.669505 | 8_4:+14692698 | None:intergenic |
TAATTGATGCACATAAGATG+AGG | 0.671637 | 8_4:+14692565 | None:intergenic |
AACAGGGAAAACCAGTACTG+TGG | 0.673122 | 8_4:-14697444 | Msa1315350:CDS |
AAACGAGGAGTCAATGAAAG+GGG | 0.678363 | 8_4:-14700144 | Msa1315350:CDS |
TGAGTAAGGAGGATTGTCTG+AGG | 0.680809 | 8_4:-14699264 | Msa1315350:intron |
GATACTGTACCTAATTGGGG+GGG | 0.687239 | 8_4:+14692699 | None:intergenic |
TGCTGCTTATTACAAAGCGG+AGG | 0.690628 | 8_4:-14701887 | Msa1315350:CDS |
TTACAGTGTCAAAGCCAAGA+CGG | 0.700662 | 8_4:-14698684 | Msa1315350:CDS |
GACACCAAACATGAGTCCAG+AGG | 0.705411 | 8_4:-14699037 | Msa1315350:CDS |
CATACTGTGCAACATTGGTG+CGG | 0.714917 | 8_4:+14698618 | None:intergenic |
GTTCGCAGAATAGTTTCACG+CGG | 0.715239 | 8_4:+14699325 | None:intergenic |
ACATGCTGCTTATTACAAAG+CGG | 0.716900 | 8_4:-14701890 | Msa1315350:CDS |
TGTGAATGAACTAATAACTG+AGG | 0.731433 | 8_4:-14694751 | Msa1315350:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTACATTTTTTTTTATG+TGG | - | chr8_4:14692543-14692562 | Msa1315350:three_prime_UTR | 10.0% |
!!! | TTTTTTATGTTAACTTAAAT+AGG | - | chr8_4:14694533-14694552 | Msa1315350:intron | 10.0% |
!! | AAAAAAAAAATTAGAAGAAT+CGG | + | chr8_4:14696134-14696153 | None:intergenic | 10.0% |
!! | AAAAGATAAAAGAATATAAA+AGG | + | chr8_4:14697586-14697605 | None:intergenic | 10.0% |
!!! | TGTTTTGATTATAAATAAAA+AGG | - | chr8_4:14703055-14703074 | Msa1315350:intron | 10.0% |
!!! | GTTTTGATTATAAATAAAAA+GGG | - | chr8_4:14703056-14703075 | Msa1315350:intron | 10.0% |
!!! | GTTTTTTTTTTTTTTTTTGA+AGG | - | chr8_4:14703662-14703681 | Msa1315350:intron | 10.0% |
!! | AATTAAATTATATACATGAA+TGG | + | chr8_4:14704297-14704316 | None:intergenic | 10.0% |
!!! | ATTATTTAATCTTTTTTTGT+TGG | - | chr8_4:14704409-14704428 | Msa1315350:five_prime_UTR | 10.0% |
!! | AAAAAAAAAAACATTATGTG+TGG | - | chr8_4:14692785-14692804 | Msa1315350:three_prime_UTR | 15.0% |
!!! | TTTTTATTGTACTTGTTTTT+GGG | - | chr8_4:14692831-14692850 | Msa1315350:three_prime_UTR | 15.0% |
!!! | TTGTTTTTGTGTTTTATTTT+TGG | - | chr8_4:14693265-14693284 | Msa1315350:intron | 15.0% |
!! | TTTGTTTAATTATTCATTCA+TGG | - | chr8_4:14693312-14693331 | Msa1315350:intron | 15.0% |
!! | ATCTTTATAAATGAGAAATA+TGG | - | chr8_4:14694093-14694112 | Msa1315350:intron | 15.0% |
!!! | ATTGTTATTGTTATGAATTA+CGG | - | chr8_4:14695304-14695323 | Msa1315350:intron | 15.0% |
!!! | TTCGTTTTTTAATATACATT+TGG | - | chr8_4:14695758-14695777 | Msa1315350:intron | 15.0% |
!! | TTAATATAAAAATACCAGTA+AGG | + | chr8_4:14696691-14696710 | None:intergenic | 15.0% |
!! | TATTAATAAAACTTTGAGTA+AGG | - | chr8_4:14697677-14697696 | Msa1315350:CDS | 15.0% |
!!! | TGATTTTTATTTTTTTGGAA+TGG | - | chr8_4:14698548-14698567 | Msa1315350:CDS | 15.0% |
!!! | TTATTTTAACGATCTATTTT+AGG | - | chr8_4:14698675-14698694 | Msa1315350:CDS | 15.0% |
!!! | TGCTTATTTTCAATTATTTA+TGG | - | chr8_4:14698728-14698747 | Msa1315350:CDS | 15.0% |
!! | AAATTGATATCGATAAATAA+AGG | + | chr8_4:14698957-14698976 | None:intergenic | 15.0% |
!! | TTATTACAACAATACATATA+CGG | - | chr8_4:14699290-14699309 | Msa1315350:CDS | 15.0% |
!! | TGTAATATTAATTACACAAA+AGG | + | chr8_4:14699359-14699378 | None:intergenic | 15.0% |
!!! | TTTCTTTTAAGAAATTGTTT+TGG | - | chr8_4:14699639-14699658 | Msa1315350:intron | 15.0% |
!!! | AAAAATGTTATTTCTTTGTT+TGG | - | chr8_4:14700126-14700145 | Msa1315350:CDS | 15.0% |
!! | TTAAATGTAAAATACCAAAA+TGG | - | chr8_4:14700708-14700727 | Msa1315350:intron | 15.0% |
!!! | ATTTGACTTTATTTTATCAT+TGG | - | chr8_4:14701529-14701548 | Msa1315350:intron | 15.0% |
!!! | TTTATCATTTGTTATAGAAA+TGG | - | chr8_4:14701748-14701767 | Msa1315350:intron | 15.0% |
!! | TTACAAAAAAATTGTCAAAA+TGG | + | chr8_4:14701852-14701871 | None:intergenic | 15.0% |
!! | TTTGATCCAATATAATTATT+TGG | - | chr8_4:14701990-14702009 | Msa1315350:intron | 15.0% |
!! | ATATTAATGAGTTATAGTTA+AGG | - | chr8_4:14702323-14702342 | Msa1315350:intron | 15.0% |
!! | TAGTAAATAATTTCCTAATT+AGG | - | chr8_4:14703182-14703201 | Msa1315350:intron | 15.0% |
!!! | ATTTTTTTTCTTTTTCTTTC+TGG | - | chr8_4:14703353-14703372 | Msa1315350:intron | 15.0% |
!!! | TTTTTTTTTTTTTTTGAAGG+AGG | - | chr8_4:14703665-14703684 | Msa1315350:intron | 15.0% |
!!! | TACATATTCATATTTTCATT+TGG | - | chr8_4:14704188-14704207 | Msa1315350:five_prime_UTR | 15.0% |
!!! | ACATATTCATATTTTCATTT+GGG | - | chr8_4:14704189-14704208 | Msa1315350:five_prime_UTR | 15.0% |
!!! | GAAAAAAAGTAGCTTTTTTA+AGG | + | chr8_4:14692704-14692723 | None:intergenic | 20.0% |
!!! | CTTTTTATTGTACTTGTTTT+TGG | - | chr8_4:14692830-14692849 | Msa1315350:three_prime_UTR | 20.0% |
!!! | TTGTTGTTAATTTTTTCTGT+TGG | - | chr8_4:14692909-14692928 | Msa1315350:three_prime_UTR | 20.0% |
!!! | ACATGAATTGTTTTTTAATG+AGG | - | chr8_4:14693415-14693434 | Msa1315350:intron | 20.0% |
!!! | GTTTTTGAATTCTGTTTAAT+TGG | - | chr8_4:14693481-14693500 | Msa1315350:intron | 20.0% |
!!! | TCAAATTATTTTGCAGAAAA+TGG | - | chr8_4:14693631-14693650 | Msa1315350:intron | 20.0% |
!!! | AACGTTTTTTTTTTCCTAAA+AGG | - | chr8_4:14694157-14694176 | Msa1315350:intron | 20.0% |
!! | CTTATCATTATATTATCTGT+GGG | + | chr8_4:14694364-14694383 | None:intergenic | 20.0% |
!!! | AAAGTTTTACTATGATATAG+AGG | + | chr8_4:14694916-14694935 | None:intergenic | 20.0% |
!!! | TATGGTATCTCTTTTTATTT+AGG | - | chr8_4:14695016-14695035 | Msa1315350:intron | 20.0% |
!!! | ATGGTATCTCTTTTTATTTA+GGG | - | chr8_4:14695017-14695036 | Msa1315350:intron | 20.0% |
!! | ACAATAACAATTAAGTACAA+TGG | + | chr8_4:14695295-14695314 | None:intergenic | 20.0% |
!!! | TTATGAATTACGGTTTTTAT+CGG | - | chr8_4:14695314-14695333 | Msa1315350:intron | 20.0% |
!! | TACAAAGAAAAACTAAAATG+TGG | + | chr8_4:14695407-14695426 | None:intergenic | 20.0% |
!!! | TTTATCGTAAGTTCATTTTA+CGG | - | chr8_4:14695637-14695656 | Msa1315350:intron | 20.0% |
!! | TTTAAAAAATCCATAGACTA+AGG | + | chr8_4:14696101-14696120 | None:intergenic | 20.0% |
!!! | TATATTTCTACACATATTCA+AGG | - | chr8_4:14696760-14696779 | Msa1315350:CDS | 20.0% |
!! | TTATATAAACAGCTTATCTT+AGG | + | chr8_4:14697066-14697085 | None:intergenic | 20.0% |
!! | AAGATAAAATAAAGTCAAAC+TGG | - | chr8_4:14697089-14697108 | Msa1315350:intron | 20.0% |
!! | CAGTCTAAATAACATAATAT+GGG | + | chr8_4:14697359-14697378 | None:intergenic | 20.0% |
!! | TCAGTCTAAATAACATAATA+TGG | + | chr8_4:14697360-14697379 | None:intergenic | 20.0% |
!! | TCAAGTTCAGTATAATAATT+GGG | + | chr8_4:14697480-14697499 | None:intergenic | 20.0% |
!! | ATCAAGTTCAGTATAATAAT+TGG | + | chr8_4:14697481-14697500 | None:intergenic | 20.0% |
!! | TATTATACTGAACTTGATTA+AGG | - | chr8_4:14697483-14697502 | Msa1315350:intron | 20.0% |
!! | AAAACTTATCAGAAAATGTT+AGG | + | chr8_4:14698105-14698124 | None:intergenic | 20.0% |
!!! | AAAAAAGTATAATGCTGATA+AGG | - | chr8_4:14698199-14698218 | Msa1315350:intron | 20.0% |
!!! | GGGTTTGATTTTTATTTTTT+TGG | - | chr8_4:14698543-14698562 | Msa1315350:CDS | 20.0% |
!! | GTTTCTATAATATATTCAAC+AGG | - | chr8_4:14699079-14699098 | Msa1315350:CDS | 20.0% |
!!! | TTACATTTTCTCATTTTACT+TGG | - | chr8_4:14699149-14699168 | Msa1315350:intron | 20.0% |
!! | AAAATAATATCAAACAAGAG+AGG | + | chr8_4:14699462-14699481 | None:intergenic | 20.0% |
!!! | TATTATTTTGTTCAGATTCT+TGG | - | chr8_4:14699473-14699492 | Msa1315350:CDS | 20.0% |
!!! | ATTATTTTGTTCAGATTCTT+GGG | - | chr8_4:14699474-14699493 | Msa1315350:CDS | 20.0% |
!!! | TTTTAAGAAATTGTTTTGGA+GGG | - | chr8_4:14699643-14699662 | Msa1315350:intron | 20.0% |
!! | CTTGAAAATAAAATATTCAC+AGG | + | chr8_4:14699701-14699720 | None:intergenic | 20.0% |
!! | AAATAATTACATTAGTTGTG+CGG | - | chr8_4:14700906-14700925 | Msa1315350:CDS | 20.0% |
!!! | TTGTTTCACCTAATATTTTT+CGG | - | chr8_4:14700998-14701017 | Msa1315350:CDS | 20.0% |
!!! | AATAGCTTGAATTTTGTATT+TGG | - | chr8_4:14701207-14701226 | Msa1315350:intron | 20.0% |
!! | AGCTTATAACTTATATGAAA+TGG | - | chr8_4:14701700-14701719 | Msa1315350:intron | 20.0% |
!!! | AAAAATTGTCAAAATGGATT+AGG | + | chr8_4:14701846-14701865 | None:intergenic | 20.0% |
!! | CCTTAACCAAATAATTATAT+TGG | + | chr8_4:14701999-14702018 | None:intergenic | 20.0% |
!! | CCAATATAATTATTTGGTTA+AGG | - | chr8_4:14701996-14702015 | Msa1315350:intron | 20.0% |
!! | TTAATATTTCCTAACTGAAA+AGG | + | chr8_4:14702310-14702329 | None:intergenic | 20.0% |
!!! | ACTTTATAAATTCATTTTCG+GGG | + | chr8_4:14702771-14702790 | None:intergenic | 20.0% |
!!! | CACTTTATAAATTCATTTTC+GGG | + | chr8_4:14702772-14702791 | None:intergenic | 20.0% |
!!! | CCACTTTATAAATTCATTTT+CGG | + | chr8_4:14702773-14702792 | None:intergenic | 20.0% |
!! | CGAAAATGAATTTATAAAGT+GGG | - | chr8_4:14702771-14702790 | Msa1315350:intron | 20.0% |
!! | TTAAGAACCTTAAAATTGTT+TGG | - | chr8_4:14703008-14703027 | Msa1315350:intron | 20.0% |
!! | TAAGAACCTTAAAATTGTTT+GGG | - | chr8_4:14703009-14703028 | Msa1315350:intron | 20.0% |
!! | TAAATAAAAAGGGAAATGTT+CGG | - | chr8_4:14703066-14703085 | Msa1315350:intron | 20.0% |
!! | AGTTAATAATCTTAGAACTT+TGG | - | chr8_4:14703115-14703134 | Msa1315350:intron | 20.0% |
!!! | ACAAGTTGATATTTTTCTTA+GGG | + | chr8_4:14703247-14703266 | None:intergenic | 20.0% |
!!! | TACAAGTTGATATTTTTCTT+AGG | + | chr8_4:14703248-14703267 | None:intergenic | 20.0% |
! | TTTAGGAAATGGAAAAAAAC+AGG | + | chr8_4:14692660-14692679 | None:intergenic | 25.0% |
!!! | TTTTTTAAGGAATCAGAAGA+AGG | + | chr8_4:14692691-14692710 | None:intergenic | 25.0% |
! | GAAAGATTATAATCCATTTG+TGG | - | chr8_4:14693559-14693578 | Msa1315350:intron | 25.0% |
!! | AAAGTAATAGCTATCCTTTT+AGG | + | chr8_4:14694174-14694193 | None:intergenic | 25.0% |
! | GCTTATCATTATATTATCTG+TGG | + | chr8_4:14694365-14694384 | None:intergenic | 25.0% |
!! | ATAATGATAAGCTGTTGATT+TGG | - | chr8_4:14694373-14694392 | Msa1315350:intron | 25.0% |
!! | TTTGGAAAGACATTTAAGTT+TGG | - | chr8_4:14694391-14694410 | Msa1315350:intron | 25.0% |
!!! | AAATTTGTTACAACTTGCTA+TGG | - | chr8_4:14694871-14694890 | Msa1315350:intron | 25.0% |
! | TTTACTATGATATAGAGGAT+AGG | + | chr8_4:14694911-14694930 | None:intergenic | 25.0% |
! | ATAATAACTCAACTGTCTTA+TGG | - | chr8_4:14694998-14695017 | Msa1315350:intron | 25.0% |
!! | ATCAAATTTGGCATTTTCTA+AGG | - | chr8_4:14695171-14695190 | Msa1315350:intron | 25.0% |
! | ATGAACTTATGAAAACAACA+AGG | + | chr8_4:14695617-14695636 | None:intergenic | 25.0% |
! | GTAACTATTTGAGTAAAACA+AGG | - | chr8_4:14695701-14695720 | Msa1315350:intron | 25.0% |
! | ATACATTTGGTTAGAGTTAT+TGG | - | chr8_4:14695771-14695790 | Msa1315350:intron | 25.0% |
! | AGATGGTCTATATTAAATGA+AGG | + | chr8_4:14695839-14695858 | None:intergenic | 25.0% |
! | TATATGAAACACTGTTTGTT+TGG | - | chr8_4:14696017-14696036 | Msa1315350:intron | 25.0% |
!!! | AGTCTATGGATTTTTTAAAC+AGG | - | chr8_4:14696102-14696121 | Msa1315350:intron | 25.0% |
! | TTGTGTGAAGTTAATTAGTA+CGG | - | chr8_4:14696153-14696172 | Msa1315350:intron | 25.0% |
! | TCTAATAAACACATATCACT+AGG | + | chr8_4:14696358-14696377 | None:intergenic | 25.0% |
!! | TAAAAAGAAAAGTACAAACC+TGG | + | chr8_4:14696508-14696527 | None:intergenic | 25.0% |
! | GTGATATATGAAATTAATCC+AGG | + | chr8_4:14696601-14696620 | None:intergenic | 25.0% |
! | ATAAAAATACCAGTAAGGAA+TGG | + | chr8_4:14696686-14696705 | None:intergenic | 25.0% |
!!! | ATACATAAGAGAAGGTATTA+TGG | + | chr8_4:14696721-14696740 | None:intergenic | 25.0% |
!!! | TTCAAGGTTTCTTTATTTTG+TGG | - | chr8_4:14696776-14696795 | Msa1315350:CDS | 25.0% |
! | TATATCGTACATATAATGTC+AGG | + | chr8_4:14696982-14697001 | None:intergenic | 25.0% |
! | AATAAGCTGAAAACAACTTA+TGG | - | chr8_4:14697165-14697184 | Msa1315350:intron | 25.0% |
! | AATAAGCTGCAAAAAACTTA+TGG | - | chr8_4:14697235-14697254 | Msa1315350:intron | 25.0% |
! | CTTCTTAAATACTAGAGAAA+AGG | + | chr8_4:14697398-14697417 | None:intergenic | 25.0% |
!! | CTTTTCTCTAGTATTTAAGA+AGG | - | chr8_4:14697396-14697415 | Msa1315350:CDS | 25.0% |
! | ATTAATAGACTTAACAGCAT+TGG | + | chr8_4:14697664-14697683 | None:intergenic | 25.0% |
! | TAATAAAACTTTGAGTAAGG+AGG | - | chr8_4:14697680-14697699 | Msa1315350:CDS | 25.0% |
!!! | GGTAAATTTCTCTTCTTTTT+TGG | - | chr8_4:14697748-14697767 | Msa1315350:intron | 25.0% |
! | AATAATGTCAAAATAACACC+CGG | + | chr8_4:14697797-14697816 | None:intergenic | 25.0% |
!!! | AAGTTGATTTGGTATTTGAA+AGG | - | chr8_4:14698703-14698722 | Msa1315350:CDS | 25.0% |
!!! | AGTTGATTTGGTATTTGAAA+GGG | - | chr8_4:14698704-14698723 | Msa1315350:CDS | 25.0% |
! | ATCTACATGTAACAAAACAA+AGG | + | chr8_4:14698837-14698856 | None:intergenic | 25.0% |
! | AAATTCAGGGAAAATTATGA+TGG | + | chr8_4:14699117-14699136 | None:intergenic | 25.0% |
! | AATTTCCACTTCAAAATTCA+GGG | + | chr8_4:14699130-14699149 | None:intergenic | 25.0% |
! | AAATTTCCACTTCAAAATTC+AGG | + | chr8_4:14699131-14699150 | None:intergenic | 25.0% |
!! | TCATTACAGTTCATTCTTTT+GGG | - | chr8_4:14699182-14699201 | Msa1315350:intron | 25.0% |
!!! | TTATTTTGTTCAGATTCTTG+GGG | - | chr8_4:14699475-14699494 | Msa1315350:CDS | 25.0% |
!!! | CTTTTAAGAAATTGTTTTGG+AGG | - | chr8_4:14699642-14699661 | Msa1315350:intron | 25.0% |
!! | TAATTTAAGATCTTCAGATG+TGG | + | chr8_4:14699899-14699918 | None:intergenic | 25.0% |
!!! | AAAAAGTACTCAGAATTTTG+AGG | + | chr8_4:14699950-14699969 | None:intergenic | 25.0% |
!!! | TTCTGAGTACTTTTTTTAGA+TGG | - | chr8_4:14699955-14699974 | Msa1315350:intron | 25.0% |
!! | TTTTCTTTCGTCATCAAAAA+AGG | + | chr8_4:14700070-14700089 | None:intergenic | 25.0% |
!!! | ATGTTATTTCTTTGTTTGGT+AGG | - | chr8_4:14700130-14700149 | Msa1315350:CDS | 25.0% |
! | AAATACCAAAATGGAATACT+TGG | - | chr8_4:14700717-14700736 | Msa1315350:intron | 25.0% |
! | GATAGTTTATGAAAATAAGC+TGG | + | chr8_4:14701467-14701486 | None:intergenic | 25.0% |
! | AATAAGCTGAAAACATCTTA+TGG | + | chr8_4:14701648-14701667 | None:intergenic | 25.0% |
! | ATTGTGATCTTGCATTTAAA+TGG | - | chr8_4:14702026-14702045 | Msa1315350:intron | 25.0% |
! | GTTGCTTAATGTTAATACTA+TGG | - | chr8_4:14702067-14702086 | Msa1315350:intron | 25.0% |
!!! | TATATACTGACCTTTAAGAT+AGG | + | chr8_4:14702250-14702269 | None:intergenic | 25.0% |
!!! | TGTTAGTTCTAGAATCATTA+CGG | - | chr8_4:14702271-14702290 | Msa1315350:intron | 25.0% |
! | AGAGACAAATGTTTCTTAAA+TGG | + | chr8_4:14702581-14702600 | None:intergenic | 25.0% |
! | ATTCTTTGTAAACTTGAAGT+TGG | - | chr8_4:14702640-14702659 | Msa1315350:intron | 25.0% |
! | CCGAAAATGAATTTATAAAG+TGG | - | chr8_4:14702770-14702789 | Msa1315350:intron | 25.0% |
! | CTAACTCAAACTTACAAATT+CGG | + | chr8_4:14702818-14702837 | None:intergenic | 25.0% |
!! | ATTTAGAGTCTAAGATTCAT+TGG | - | chr8_4:14702868-14702887 | Msa1315350:intron | 25.0% |
!! | TTTAGAGTCTAAGATTCATT+GGG | - | chr8_4:14702869-14702888 | Msa1315350:intron | 25.0% |
!!! | TTTTCCGGTTTTGTAATATT+AGG | - | chr8_4:14702948-14702967 | Msa1315350:intron | 25.0% |
! | CTAACCTAATATTACAAAAC+CGG | + | chr8_4:14702955-14702974 | None:intergenic | 25.0% |
!!! | CTAAACCTAGTCTTAAAATT+TGG | + | chr8_4:14702985-14703004 | None:intergenic | 25.0% |
!! | TTTGAACCCAAACAATTTTA+AGG | + | chr8_4:14703018-14703037 | None:intergenic | 25.0% |
! | AAATAAAAAGGGAAATGTTC+GGG | - | chr8_4:14703067-14703086 | Msa1315350:intron | 25.0% |
! | TATCAGTTACAATAAGTTTG+CGG | + | chr8_4:14703504-14703523 | None:intergenic | 25.0% |
! | GAGTTTATGAAAACAACTTA+TGG | - | chr8_4:14703628-14703647 | Msa1315350:intron | 25.0% |
!! | TCATTCAAACATTCTTTTCT+AGG | - | chr8_4:14703872-14703891 | Msa1315350:CDS | 25.0% |
!! | TTTTGCTTTCAATGTATTTC+AGG | - | chr8_4:14703918-14703937 | Msa1315350:CDS | 25.0% |
! | GAAGAAGAACTTAACAAAAA+TGG | - | chr8_4:14703952-14703971 | Msa1315350:CDS | 25.0% |
!!! | ATACTGAAAGCTTTGAAAAT+TGG | - | chr8_4:14703980-14703999 | Msa1315350:exon | 25.0% |
!!! | TACTGAAAGCTTTGAAAATT+GGG | - | chr8_4:14703981-14704000 | Msa1315350:exon | 25.0% |
!!! | AAGCTGATTTTTGTTCAAAA+GGG | - | chr8_4:14704156-14704175 | Msa1315350:five_prime_UTR | 25.0% |
!! | TATTCATATTTTCATTTGGG+AGG | - | chr8_4:14704192-14704211 | Msa1315350:five_prime_UTR | 25.0% |
!! | ATAGCTTTTAAACCTTAGTT+TGG | - | chr8_4:14704349-14704368 | Msa1315350:five_prime_UTR | 25.0% |
!! | TAGCTTTTAAACCTTAGTTT+GGG | - | chr8_4:14704350-14704369 | Msa1315350:five_prime_UTR | 25.0% |
!!! | AGGTGTTTAGTTTTAGGAAA+TGG | + | chr8_4:14692671-14692690 | None:intergenic | 30.0% |
!!! | AGAAGAAGGTGTTTAGTTTT+AGG | + | chr8_4:14692677-14692696 | None:intergenic | 30.0% |
AGCTCAAAACTTTACATCAA+TGG | + | chr8_4:14692812-14692831 | None:intergenic | 30.0% | |
AGATTGTTTCAATTGAGCAA+AGG | - | chr8_4:14693347-14693366 | Msa1315350:intron | 30.0% | |
! | ATTTTGCAGAAAATGGCTTA+TGG | - | chr8_4:14693638-14693657 | Msa1315350:intron | 30.0% |
ATCTGAAAACAATGGAGAAT+AGG | + | chr8_4:14693667-14693686 | None:intergenic | 30.0% | |
TTAGTCGGCAAAAAGTAATA+GGG | + | chr8_4:14693967-14693986 | None:intergenic | 30.0% | |
ATTAGTCGGCAAAAAGTAAT+AGG | + | chr8_4:14693968-14693987 | None:intergenic | 30.0% | |
AAAAAAGCAGACAGATTAGT+CGG | + | chr8_4:14693982-14694001 | None:intergenic | 30.0% | |
TCAGTATTCAGTAATATCAC+AGG | + | chr8_4:14694038-14694057 | None:intergenic | 30.0% | |
!! | TACTGATGAAGTGTTTTTAC+AGG | - | chr8_4:14694052-14694071 | Msa1315350:intron | 30.0% |
! | TTGTCTTATTCTCCTCAATT+TGG | - | chr8_4:14694196-14694215 | Msa1315350:intron | 30.0% |
TATATTATCTGTGGGAGAAA+AGG | + | chr8_4:14694356-14694375 | None:intergenic | 30.0% | |
TTACGATGCTTTCTAATTAC+CGG | - | chr8_4:14694492-14694511 | Msa1315350:intron | 30.0% | |
!! | AATATACGAAAGAGCACTAT+TGG | - | chr8_4:14694644-14694663 | Msa1315350:intron | 30.0% |
AATCTCTGAGCATAGAAAAA+TGG | + | chr8_4:14694682-14694701 | None:intergenic | 30.0% | |
! | GAGACAAAAACAGAACATTT+TGG | - | chr8_4:14694716-14694735 | Msa1315350:intron | 30.0% |
! | CAAAAACAGAACATTTTGGA+AGG | - | chr8_4:14694720-14694739 | Msa1315350:CDS | 30.0% |
ACAATTAAGTACAATGGACA+GGG | + | chr8_4:14695289-14695308 | None:intergenic | 30.0% | |
AACAATTAAGTACAATGGAC+AGG | + | chr8_4:14695290-14695309 | None:intergenic | 30.0% | |
AACTTATGAAAACAACAAGG+AGG | + | chr8_4:14695614-14695633 | None:intergenic | 30.0% | |
! | AGTAAAACAAGGTATTTCCA+GGG | - | chr8_4:14695712-14695731 | Msa1315350:intron | 30.0% |
AATATAGACCATCTCACTAA+TGG | - | chr8_4:14695845-14695864 | Msa1315350:intron | 30.0% | |
AAAAAAGTCCATTAGTGAGA+TGG | + | chr8_4:14695856-14695875 | None:intergenic | 30.0% | |
AGTCTTCAAAAGAACTTATC+TGG | - | chr8_4:14695971-14695990 | Msa1315350:intron | 30.0% | |
!!! | TTTTTTGTGGTTCAACTTCA+AGG | + | chr8_4:14696241-14696260 | None:intergenic | 30.0% |
TGAAGTTGAACCACAAAAAA+AGG | - | chr8_4:14696241-14696260 | Msa1315350:intron | 30.0% | |
!!! | GTATGTCAAACCTTTTTTTG+TGG | + | chr8_4:14696254-14696273 | None:intergenic | 30.0% |
! | TTTCATGTTTTGCGTATTTC+TGG | - | chr8_4:14696298-14696317 | Msa1315350:intron | 30.0% |
! | CTTGACAAGTTTTCATTACA+TGG | - | chr8_4:14696397-14696416 | Msa1315350:CDS | 30.0% |
TAGGTTAACCTTTCTATATC+TGG | - | chr8_4:14696429-14696448 | Msa1315350:CDS | 30.0% | |
AACATAAACCGGTATAGTAT+AGG | + | chr8_4:14696631-14696650 | None:intergenic | 30.0% | |
CTCGTGAAATTAACATAAAC+CGG | + | chr8_4:14696642-14696661 | None:intergenic | 30.0% | |
ATGTCAGGTTTCATATTCAA+TGG | + | chr8_4:14696967-14696986 | None:intergenic | 30.0% | |
! | TTTGTTTCTCACTTACGTTT+GGG | - | chr8_4:14697025-14697044 | Msa1315350:intron | 30.0% |
GCTTATTTCAACTTATCTAC+TGG | + | chr8_4:14697316-14697335 | None:intergenic | 30.0% | |
ATTCTCAAAATGAAGTCTTG+TGG | + | chr8_4:14697437-14697456 | None:intergenic | 30.0% | |
ATACTGAACTTGATTAAGGT+AGG | - | chr8_4:14697487-14697506 | Msa1315350:intron | 30.0% | |
ATAATGTCAAAATAACACCC+GGG | + | chr8_4:14697796-14697815 | None:intergenic | 30.0% | |
CTTACTCAGAAAAGGAATAT+GGG | + | chr8_4:14697951-14697970 | None:intergenic | 30.0% | |
ACTTACTCAGAAAAGGAATA+TGG | + | chr8_4:14697952-14697971 | None:intergenic | 30.0% | |
TTATGGTACTTACTCAGAAA+AGG | + | chr8_4:14697959-14697978 | None:intergenic | 30.0% | |
AGGATCAAAATGCATTGTTA+TGG | + | chr8_4:14697976-14697995 | None:intergenic | 30.0% | |
AATGGTTATTACAGTTGTGA+TGG | - | chr8_4:14698236-14698255 | Msa1315350:intron | 30.0% | |
TCATTAAATCCTTTGCCAAA+GGG | + | chr8_4:14698439-14698458 | None:intergenic | 30.0% | |
TTCATTAAATCCTTTGCCAA+AGG | + | chr8_4:14698440-14698459 | None:intergenic | 30.0% | |
AATGAAAGTTTATGAGTCCA+TGG | - | chr8_4:14698454-14698473 | Msa1315350:CDS | 30.0% | |
ATGAAAGTTTATGAGTCCAT+GGG | - | chr8_4:14698455-14698474 | Msa1315350:CDS | 30.0% | |
!! | ACACATTAGCCTTTCAATAT+GGG | - | chr8_4:14698480-14698499 | Msa1315350:CDS | 30.0% |
AGGTAATCTTTCTATCTTTC+AGG | - | chr8_4:14698522-14698541 | Msa1315350:CDS | 30.0% | |
GGTAATCTTTCTATCTTTCA+GGG | - | chr8_4:14698523-14698542 | Msa1315350:CDS | 30.0% | |
AGTATATGTAGTGCAAATGT+TGG | - | chr8_4:14698579-14698598 | Msa1315350:CDS | 30.0% | |
AAACAGTCGTTATATAGCAT+CGG | + | chr8_4:14698643-14698662 | None:intergenic | 30.0% | |
! | TTTAGGTAGCAAAGTTGATT+TGG | - | chr8_4:14698692-14698711 | Msa1315350:CDS | 30.0% |
TACATGTAACAAAACAAAGG+TGG | + | chr8_4:14698834-14698853 | None:intergenic | 30.0% | |
CAATGAATCAAGAAAACAGT+AGG | + | chr8_4:14698895-14698914 | None:intergenic | 30.0% | |
!! | ATTTTCCCTGAATTTTGAAG+TGG | - | chr8_4:14699122-14699141 | Msa1315350:CDS | 30.0% |
! | CTCATTACAGTTCATTCTTT+TGG | - | chr8_4:14699181-14699200 | Msa1315350:intron | 30.0% |
!! | CAGATATTTTCTAGAAGTAG+AGG | - | chr8_4:14699216-14699235 | Msa1315350:intron | 30.0% |
ATTGTTGTAATAACGCTGTA+GGG | + | chr8_4:14699283-14699302 | None:intergenic | 30.0% | |
TATTGTTGTAATAACGCTGT+AGG | + | chr8_4:14699284-14699303 | None:intergenic | 30.0% | |
TACAACAATACATATACGGA+CGG | - | chr8_4:14699294-14699313 | Msa1315350:CDS | 30.0% | |
GTATACTTTCAGATTACCTA+TGG | + | chr8_4:14699395-14699414 | None:intergenic | 30.0% | |
! | TCAGATCAACATTACCTTTT+TGG | - | chr8_4:14699543-14699562 | Msa1315350:CDS | 30.0% |
TCAATTCCATCTGCTAAATT+TGG | + | chr8_4:14699579-14699598 | None:intergenic | 30.0% | |
AATTTAGCAGATGGAATTGA+TGG | - | chr8_4:14699579-14699598 | Msa1315350:intron | 30.0% | |
ATTTAGCAGATGGAATTGAT+GGG | - | chr8_4:14699580-14699599 | Msa1315350:intron | 30.0% | |
ATGAACCTTTACATCATTAG+AGG | - | chr8_4:14699732-14699751 | Msa1315350:intron | 30.0% | |
TAGTACCTCTAATGATGTAA+AGG | + | chr8_4:14699740-14699759 | None:intergenic | 30.0% | |
ACTCGAATCATCATGTTATA+TGG | + | chr8_4:14699846-14699865 | None:intergenic | 30.0% | |
AACACAATAACAATGGCATT+TGG | + | chr8_4:14699873-14699892 | None:intergenic | 30.0% | |
! | AGCTTTGACTTATCTATCAA+AGG | - | chr8_4:14700005-14700024 | Msa1315350:CDS | 30.0% |
TCAAAGGACAAATATCACAT+AGG | - | chr8_4:14700021-14700040 | Msa1315350:CDS | 30.0% | |
ATGACACAAACTTGTGTAAT+TGG | - | chr8_4:14700345-14700364 | Msa1315350:intron | 30.0% | |
ACGTGCTATCAATATTATAC+AGG | - | chr8_4:14700426-14700445 | Msa1315350:intron | 30.0% | |
! | TGTGATCGTTTTCATAATGT+TGG | + | chr8_4:14700478-14700497 | None:intergenic | 30.0% |
AAGTTTACCAAACAAAGTCT+CGG | + | chr8_4:14700612-14700631 | None:intergenic | 30.0% | |
! | CTATACCAAGTATTCCATTT+TGG | + | chr8_4:14700725-14700744 | None:intergenic | 30.0% |
AAATGGAATACTTGGTATAG+AGG | - | chr8_4:14700725-14700744 | Msa1315350:intron | 30.0% | |
! | CTTTATTTGTCGAACAAAGT+TGG | - | chr8_4:14700771-14700790 | Msa1315350:intron | 30.0% |
! | AAATTTGAACGCAACTTTTG+AGG | + | chr8_4:14700836-14700855 | None:intergenic | 30.0% |
AGAGCATAATACGAAATCTA+TGG | + | chr8_4:14700955-14700974 | None:intergenic | 30.0% | |
!! | TTTCACCTAATATTTTTCGG+AGG | - | chr8_4:14701001-14701020 | Msa1315350:CDS | 30.0% |
TCAGTCTATTTCGATTGTTT+AGG | - | chr8_4:14701083-14701102 | Msa1315350:intron | 30.0% | |
CAGTCTATTTCGATTGTTTA+GGG | - | chr8_4:14701084-14701103 | Msa1315350:intron | 30.0% | |
! | TTCATCCATGATTTAGAACA+CGG | - | chr8_4:14701110-14701129 | Msa1315350:intron | 30.0% |
CCTTTCAATATGCTAATTGA+AGG | + | chr8_4:14701331-14701350 | None:intergenic | 30.0% | |
CCTTCAATTAGCATATTGAA+AGG | - | chr8_4:14701328-14701347 | Msa1315350:intron | 30.0% | |
TTAGCATATTGAAAGGATTC+AGG | - | chr8_4:14701335-14701354 | Msa1315350:intron | 30.0% | |
TAGCATATTGAAAGGATTCA+GGG | - | chr8_4:14701336-14701355 | Msa1315350:intron | 30.0% | |
! | AATAAGCTGGAATTAGCTTA+TGG | + | chr8_4:14701454-14701473 | None:intergenic | 30.0% |
AAGCTATCTTAGAGAGATTA+TGG | + | chr8_4:14701672-14701691 | None:intergenic | 30.0% | |
!! | AAAATGGATTAGGTCGTATT+TGG | + | chr8_4:14701836-14701855 | None:intergenic | 30.0% |
TGTCATAACATGTTAGTCAA+GGG | - | chr8_4:14701874-14701893 | Msa1315350:CDS | 30.0% | |
!!! | TGGATTTCATTTTTTGAGCA+TGG | - | chr8_4:14701940-14701959 | Msa1315350:intron | 30.0% |
!!! | TTTCATTTTTTGAGCATGGA+AGG | - | chr8_4:14701944-14701963 | Msa1315350:intron | 30.0% |
!!! | TTCATTTTTTGAGCATGGAA+GGG | - | chr8_4:14701945-14701964 | Msa1315350:intron | 30.0% |
! | AAAAACCTAGTTCTTGAGTT+AGG | - | chr8_4:14702093-14702112 | Msa1315350:CDS | 30.0% |
! | AAAACCTAGTTCTTGAGTTA+GGG | - | chr8_4:14702094-14702113 | Msa1315350:CDS | 30.0% |
ATTGATGCCAATATTGTTGA+TGG | - | chr8_4:14702149-14702168 | Msa1315350:CDS | 30.0% | |
TTCATTCACAATATTGTCTG+AGG | + | chr8_4:14702194-14702213 | None:intergenic | 30.0% | |
TGTGAATGAACTAATAACTG+AGG | - | chr8_4:14702204-14702223 | Msa1315350:CDS | 30.0% | |
TACATTAATATGTGCCCTTA+GGG | + | chr8_4:14702365-14702384 | None:intergenic | 30.0% | |
AAGAAACATTTGTCTCTTTC+TGG | - | chr8_4:14702584-14702603 | Msa1315350:intron | 30.0% | |
CATCAATAAGTCTTACTAAC+AGG | + | chr8_4:14702619-14702638 | None:intergenic | 30.0% | |
ACTTCACAATGCAAACTTAT+TGG | - | chr8_4:14702670-14702689 | Msa1315350:intron | 30.0% | |
! | CGAATTTGTAAGTTTGAGTT+AGG | - | chr8_4:14702816-14702835 | Msa1315350:intron | 30.0% |
GACTAACACAAATTACAAGA+TGG | - | chr8_4:14702838-14702857 | Msa1315350:intron | 30.0% | |
!! | CGGTTTTGTAATATTAGGTT+AGG | - | chr8_4:14702953-14702972 | Msa1315350:intron | 30.0% |
!! | CTAGTCTTAAAATTTGGTAC+GGG | + | chr8_4:14702979-14702998 | None:intergenic | 30.0% |
!! | CCTAGTCTTAAAATTTGGTA+CGG | + | chr8_4:14702980-14702999 | None:intergenic | 30.0% |
AACTTGTGTATTCCATACAT+TGG | - | chr8_4:14703138-14703157 | Msa1315350:intron | 30.0% | |
ACAGTTCAATTTCCAATGTA+TGG | + | chr8_4:14703153-14703172 | None:intergenic | 30.0% | |
! | CTCTTTAAGGATTCCTAATT+AGG | + | chr8_4:14703198-14703217 | None:intergenic | 30.0% |
TATAGAAACCAGTAATCTGA+TGG | - | chr8_4:14703298-14703317 | Msa1315350:intron | 30.0% | |
!! | TTCTTTTTCTTTCTGGTGTA+TGG | - | chr8_4:14703360-14703379 | Msa1315350:intron | 30.0% |
! | TTTTCATAAGCAATCCTAGA+GGG | + | chr8_4:14703727-14703746 | None:intergenic | 30.0% |
! | ATTTTCATAAGCAATCCTAG+AGG | + | chr8_4:14703728-14703747 | None:intergenic | 30.0% |
GCAAAATTGTGTTTACCAAT+TGG | + | chr8_4:14703904-14703923 | None:intergenic | 30.0% | |
TTTGAAAATTGGGTTACTCA+TGG | - | chr8_4:14703991-14704010 | Msa1315350:five_prime_UTR | 30.0% | |
! | CTTTGCTGTACAGAAATAAA+TGG | - | chr8_4:14704091-14704110 | Msa1315350:five_prime_UTR | 30.0% |
!! | GAAGCTGATTTTTGTTCAAA+AGG | - | chr8_4:14704155-14704174 | Msa1315350:five_prime_UTR | 30.0% |
TAATTGATGCACATAAGATG+AGG | + | chr8_4:14704393-14704412 | None:intergenic | 30.0% | |
!!! | ACTTGTTTTTGGGTCTGTTT+TGG | - | chr8_4:14692841-14692860 | Msa1315350:three_prime_UTR | 35.0% |
!!! | AGCTTTGTTTTGAAGCTCAA+GGG | - | chr8_4:14692961-14692980 | Msa1315350:CDS | 35.0% |
TTTGCTACATGCAGAAGTTT+AGG | - | chr8_4:14693084-14693103 | Msa1315350:intron | 35.0% | |
GTGGATTCTTCAAGAAAACA+TGG | - | chr8_4:14693510-14693529 | Msa1315350:intron | 35.0% | |
TATAATCTTTCAAGCCAAGC+AGG | + | chr8_4:14693550-14693569 | None:intergenic | 35.0% | |
AACACAAATGACACCACAAA+TGG | + | chr8_4:14693575-14693594 | None:intergenic | 35.0% | |
! | TCTCCATTGTTTTCAGATTG+TGG | - | chr8_4:14693669-14693688 | Msa1315350:intron | 35.0% |
! | CTCCATTGTTTTCAGATTGT+GGG | - | chr8_4:14693670-14693689 | Msa1315350:intron | 35.0% |
! | TCCATTGTTTTCAGATTGTG+GGG | - | chr8_4:14693671-14693690 | Msa1315350:intron | 35.0% |
GCTTATGCCAATAAGCTATT+TGG | - | chr8_4:14693814-14693833 | Msa1315350:intron | 35.0% | |
TATGCCAATAAGCTATTTGG+AGG | - | chr8_4:14693817-14693836 | Msa1315350:intron | 35.0% | |
AGTTCCTCCAAATAGCTTAT+TGG | + | chr8_4:14693824-14693843 | None:intergenic | 35.0% | |
AAAAAGTAATAGGGGGAGTT+TGG | + | chr8_4:14693958-14693977 | None:intergenic | 35.0% | |
TAGTCGGCAAAAAGTAATAG+GGG | + | chr8_4:14693966-14693985 | None:intergenic | 35.0% | |
GGAATCTTTCAAGAGAAATG+TGG | + | chr8_4:14694017-14694036 | None:intergenic | 35.0% | |
TCCTCAATTTGGTAAGATTG+AGG | - | chr8_4:14694207-14694226 | Msa1315350:intron | 35.0% | |
TCCTCAATCTTACCAAATTG+AGG | + | chr8_4:14694211-14694230 | None:intergenic | 35.0% | |
AGATTCTGGATATAGTCACA+TGG | + | chr8_4:14694237-14694256 | None:intergenic | 35.0% | |
GTGACTATATCCAGAATCTT+TGG | - | chr8_4:14694238-14694257 | Msa1315350:intron | 35.0% | |
CAGAATCTTTGGCTGAAAAT+GGG | - | chr8_4:14694249-14694268 | Msa1315350:intron | 35.0% | |
AGAATCTTTGGCTGAAAATG+GGG | - | chr8_4:14694250-14694269 | Msa1315350:intron | 35.0% | |
AATGGGGAAAAGGCTAATTA+AGG | - | chr8_4:14694266-14694285 | Msa1315350:intron | 35.0% | |
! | TTCTGGAAATGGGATCTAAA+AGG | - | chr8_4:14694323-14694342 | Msa1315350:intron | 35.0% |
! | AACGACAAGATTTTCTCAGA+AGG | + | chr8_4:14694609-14694628 | None:intergenic | 35.0% |
GCTCAGAGATTCTATATGAT+TGG | - | chr8_4:14694691-14694710 | Msa1315350:intron | 35.0% | |
GGTCTTAAAGATTGACAGAT+TGG | - | chr8_4:14694741-14694760 | Msa1315350:CDS | 35.0% | |
!! | ACAACTTGCTATGGAATCAT+CGG | - | chr8_4:14694880-14694899 | Msa1315350:intron | 35.0% |
GTAATAAGCAGCATGTAGTA+TGG | + | chr8_4:14695061-14695080 | None:intergenic | 35.0% | |
! | ACATGCTGCTTATTACAAAG+CGG | - | chr8_4:14695065-14695084 | Msa1315350:intron | 35.0% |
TTCAAGTGTGCGATCAAATT+TGG | - | chr8_4:14695159-14695178 | Msa1315350:intron | 35.0% | |
!! | CATTTTCTAAGGATGAGAAC+AGG | - | chr8_4:14695182-14695201 | Msa1315350:intron | 35.0% |
ATGTACCTGTAATGTGTCTA+TGG | - | chr8_4:14695222-14695241 | Msa1315350:intron | 35.0% | |
ATGTACCATAGACACATTAC+AGG | + | chr8_4:14695230-14695249 | None:intergenic | 35.0% | |
! | TTCATTTTACGGAACTGTAC+AGG | - | chr8_4:14695648-14695667 | Msa1315350:intron | 35.0% |
! | GAGTAAAACAAGGTATTTCC+AGG | - | chr8_4:14695711-14695730 | Msa1315350:intron | 35.0% |
CAAGAAGTTTCTATGCAGTA+TGG | - | chr8_4:14695901-14695920 | Msa1315350:intron | 35.0% | |
ATGCAGTATGGATCTTACAA+AGG | - | chr8_4:14695913-14695932 | Msa1315350:intron | 35.0% | |
CTTATCTGGTCATAATGTCA+CGG | - | chr8_4:14695985-14696004 | Msa1315350:intron | 35.0% | |
TTATCTGGTCATAATGTCAC+GGG | - | chr8_4:14695986-14696005 | Msa1315350:intron | 35.0% | |
ATAATCTCCAGAATACTTCC+TGG | - | chr8_4:14696068-14696087 | Msa1315350:intron | 35.0% | |
ACATGAAAGAAACTGGCAAT+AGG | + | chr8_4:14696286-14696305 | None:intergenic | 35.0% | |
ACGCAAAACATGAAAGAAAC+TGG | + | chr8_4:14696293-14696312 | None:intergenic | 35.0% | |
TGGTAATCAAGTCAAACTTG+CGG | + | chr8_4:14696455-14696474 | None:intergenic | 35.0% | |
! | TTGACTTGATTACCATTGCT+AGG | - | chr8_4:14696460-14696479 | Msa1315350:CDS | 35.0% |
! | ACGAGTTTCTAGACAAGATT+TGG | - | chr8_4:14696657-14696676 | Msa1315350:CDS | 35.0% |
GACTAGAGATACATAAGAGA+AGG | + | chr8_4:14696729-14696748 | None:intergenic | 35.0% | |
!!! | GTTTCTTTATTTTGTGGTGC+AGG | - | chr8_4:14696782-14696801 | Msa1315350:CDS | 35.0% |
AGGTTTCATATTCAATGGAG+AGG | + | chr8_4:14696962-14696981 | None:intergenic | 35.0% | |
CAAACGTAAGTGAGAAACAA+AGG | + | chr8_4:14697026-14697045 | None:intergenic | 35.0% | |
! | CTTTGTTTCTCACTTACGTT+TGG | - | chr8_4:14697024-14697043 | Msa1315350:intron | 35.0% |
TACGTTTGGGTAAACAACTT+AGG | - | chr8_4:14697038-14697057 | Msa1315350:intron | 35.0% | |
TAACATAATATGGGCCTGTT+TGG | + | chr8_4:14697350-14697369 | None:intergenic | 35.0% | |
! | TTTAGACTGACTGCTCATTT+TGG | - | chr8_4:14697370-14697389 | Msa1315350:intron | 35.0% |
GAGAATCTTGTCATGAGATA+TGG | - | chr8_4:14697451-14697470 | Msa1315350:CDS | 35.0% | |
CGAGATGGAAAAATAAAACC+TGG | + | chr8_4:14697542-14697561 | None:intergenic | 35.0% | |
ATCTTAGTTTAGACACGAGA+TGG | + | chr8_4:14697557-14697576 | None:intergenic | 35.0% | |
! | ATTGTCTGAGGTATCTTCAT+TGG | - | chr8_4:14697703-14697722 | Msa1315350:CDS | 35.0% |
! | TTGTCTGAGGTATCTTCATT+GGG | - | chr8_4:14697704-14697723 | Msa1315350:CDS | 35.0% |
!!! | TTTTTTGGTCCATGCTCAAT+AGG | - | chr8_4:14697763-14697782 | Msa1315350:intron | 35.0% |
ATTAACAACTTTCAGCAGCA+AGG | - | chr8_4:14697819-14697838 | Msa1315350:intron | 35.0% | |
ATTGAAGATCAAACCATCTG+TGG | - | chr8_4:14698045-14698064 | Msa1315350:intron | 35.0% | |
GATGAATTTCTTGTTGAGCA+AGG | - | chr8_4:14698170-14698189 | Msa1315350:intron | 35.0% | |
GCTGATAAGGAAACAGAAAA+TGG | - | chr8_4:14698212-14698231 | Msa1315350:intron | 35.0% | |
AAGGAAACAGAAAATGGCAA+TGG | - | chr8_4:14698218-14698237 | Msa1315350:intron | 35.0% | |
ATAAGCATACTGTGCAACAT+TGG | + | chr8_4:14698345-14698364 | None:intergenic | 35.0% | |
AATGTTGCACAGTATGCTTA+TGG | - | chr8_4:14698344-14698363 | Msa1315350:intron | 35.0% | |
GAATCCCCACATATTAAACT+TGG | - | chr8_4:14698410-14698429 | Msa1315350:intron | 35.0% | |
GTTGCCAAGTTTAATATGTG+GGG | + | chr8_4:14698417-14698436 | None:intergenic | 35.0% | |
GGTTGCCAAGTTTAATATGT+GGG | + | chr8_4:14698418-14698437 | None:intergenic | 35.0% | |
TATTAAACTTGGCAACCCTT+TGG | - | chr8_4:14698421-14698440 | Msa1315350:intron | 35.0% | |
!! | GACACATTAGCCTTTCAATA+TGG | - | chr8_4:14698479-14698498 | Msa1315350:CDS | 35.0% |
!! | CACATTAGCCTTTCAATATG+GGG | - | chr8_4:14698481-14698500 | Msa1315350:CDS | 35.0% |
!! | ACATTAGCCTTTCAATATGG+GGG | - | chr8_4:14698482-14698501 | Msa1315350:CDS | 35.0% |
AGTGCAAATGTTGGACTTTA+TGG | - | chr8_4:14698588-14698607 | Msa1315350:CDS | 35.0% | |
! | CGTTATATAGCATCGGATTT+CGG | + | chr8_4:14698636-14698655 | None:intergenic | 35.0% |
TGATGATCTTCAACTCACTA+GGG | + | chr8_4:14698759-14698778 | None:intergenic | 35.0% | |
ATGATGATCTTCAACTCACT+AGG | + | chr8_4:14698760-14698779 | None:intergenic | 35.0% | |
! | CATCATCACTTCTTGATTTG+AGG | - | chr8_4:14698993-14699012 | Msa1315350:intron | 35.0% |
TTATGAACTCCTCTCGTAAA+AGG | - | chr8_4:14699024-14699043 | Msa1315350:CDS | 35.0% | |
! | TTTCTAGAAGTAGAGGTCAA+TGG | - | chr8_4:14699223-14699242 | Msa1315350:intron | 35.0% |
ACAACAATACATATACGGAC+GGG | - | chr8_4:14699295-14699314 | Msa1315350:CDS | 35.0% | |
!! | CATTACCTTTTTGGAAGTCA+TGG | - | chr8_4:14699552-14699571 | Msa1315350:intron | 35.0% |
! | ATGGAATTGATGGGTATGTT+TGG | - | chr8_4:14699589-14699608 | Msa1315350:intron | 35.0% |
!!! | TAAGAAATTGTTTTGGAGGG+AGG | - | chr8_4:14699646-14699665 | Msa1315350:intron | 35.0% |
GTGGAGTAACACAATAACAA+TGG | + | chr8_4:14699880-14699899 | None:intergenic | 35.0% | |
TCTTTCGTCATCAAAAAAGG+AGG | + | chr8_4:14700067-14700086 | None:intergenic | 35.0% | |
ATTAGAAGATCACAATCCGA+TGG | - | chr8_4:14700159-14700178 | Msa1315350:intron | 35.0% | |
! | TCAGGATTTTCAGATGAGTA+CGG | + | chr8_4:14700240-14700259 | None:intergenic | 35.0% |
! | TCCTGATAAGCAATCTCTTT+TGG | - | chr8_4:14700254-14700273 | Msa1315350:intron | 35.0% |
TCCAAAAGAGATTGCTTATC+AGG | + | chr8_4:14700258-14700277 | None:intergenic | 35.0% | |
CACGTAAGTTTCTAAACATG+TGG | + | chr8_4:14700411-14700430 | None:intergenic | 35.0% | |
TTATACAGGCAAGTTTATGC+AGG | - | chr8_4:14700440-14700459 | Msa1315350:intron | 35.0% | |
CTTTCTTCCTAAATGAGAAG+CGG | - | chr8_4:14700652-14700671 | Msa1315350:intron | 35.0% | |
!!! | ACTTAGAAGTTTGTTTTGGC+TGG | + | chr8_4:14700680-14700699 | None:intergenic | 35.0% |
!! | CCTCACTTAGAAGTTTGTTT+TGG | + | chr8_4:14700684-14700703 | None:intergenic | 35.0% |
CCAAAACAAACTTCTAAGTG+AGG | - | chr8_4:14700681-14700700 | Msa1315350:intron | 35.0% | |
!!! | TCGAACAAAGTTGGTTTTGT+TGG | - | chr8_4:14700780-14700799 | Msa1315350:intron | 35.0% |
!!! | GTTGGTTTTGTTGGTTGTTT+TGG | - | chr8_4:14700789-14700808 | Msa1315350:intron | 35.0% |
AAAGTTGCGTTCAAATTTGC+TGG | - | chr8_4:14700838-14700857 | Msa1315350:intron | 35.0% | |
TTAGGCCTCCGAAAAATATT+AGG | + | chr8_4:14701009-14701028 | None:intergenic | 35.0% | |
TCTATTTCGATTGTTTAGGG+AGG | - | chr8_4:14701087-14701106 | Msa1315350:intron | 35.0% | |
! | ATTGTCCGTGTTCTAAATCA+TGG | + | chr8_4:14701118-14701137 | None:intergenic | 35.0% |
GGACTATAGCATGAACATAA+AGG | + | chr8_4:14701164-14701183 | None:intergenic | 35.0% | |
TAATTGAAGGAACTGAGTGA+AGG | + | chr8_4:14701318-14701337 | None:intergenic | 35.0% | |
AGCATATTGAAAGGATTCAG+GGG | - | chr8_4:14701337-14701356 | Msa1315350:intron | 35.0% | |
ATCACAAGTGCTTATGTCAA+TGG | + | chr8_4:14701392-14701411 | None:intergenic | 35.0% | |
! | AAGCACTTGTGATACTGTTT+TGG | - | chr8_4:14701399-14701418 | Msa1315350:CDS | 35.0% |
! | AGCACTTGTGATACTGTTTT+GGG | - | chr8_4:14701400-14701419 | Msa1315350:CDS | 35.0% |
!!! | ATACTGTTTTGGGGAGTTTA+TGG | - | chr8_4:14701410-14701429 | Msa1315350:CDS | 35.0% |
! | GAATTAGCTTATGGACACAT+CGG | + | chr8_4:14701445-14701464 | None:intergenic | 35.0% |
AGTGCGTAATCAAGAGTTTA+TGG | - | chr8_4:14701604-14701623 | Msa1315350:intron | 35.0% | |
CTGTCATAACATGTTAGTCA+AGG | - | chr8_4:14701873-14701892 | Msa1315350:CDS | 35.0% | |
TACTGAAGTGAATTCTGATG+TGG | - | chr8_4:14701904-14701923 | Msa1315350:CDS | 35.0% | |
GTGAATTCTGATGTGGAATT+AGG | - | chr8_4:14701911-14701930 | Msa1315350:CDS | 35.0% | |
AATTCTGATGTGGAATTAGG+AGG | - | chr8_4:14701914-14701933 | Msa1315350:CDS | 35.0% | |
ATTCTGATGTGGAATTAGGA+GGG | - | chr8_4:14701915-14701934 | Msa1315350:CDS | 35.0% | |
ACCTGTACCATCAACAATAT+TGG | + | chr8_4:14702159-14702178 | None:intergenic | 35.0% | |
TGAATCTGGACCTATCTTAA+AGG | - | chr8_4:14702237-14702256 | Msa1315350:CDS | 35.0% | |
! | ACATAACTGCCTTTTCAGTT+AGG | - | chr8_4:14702298-14702317 | Msa1315350:intron | 35.0% |
GTACATTAATATGTGCCCTT+AGG | + | chr8_4:14702366-14702385 | None:intergenic | 35.0% | |
TTGTCTCTTTCTGGATTTCA+AGG | - | chr8_4:14702593-14702612 | Msa1315350:intron | 35.0% | |
!! | GATCTCTATTTTGTTGTCCT+GGG | - | chr8_4:14702715-14702734 | Msa1315350:intron | 35.0% |
AGCTTGTAAGATGAGAGATA+TGG | + | chr8_4:14702926-14702945 | None:intergenic | 35.0% | |
ATATCTCTCATCTTACAAGC+TGG | - | chr8_4:14702925-14702944 | Msa1315350:intron | 35.0% | |
!!! | CCGTACCAAATTTTAAGACT+AGG | - | chr8_4:14702977-14702996 | Msa1315350:intron | 35.0% |
!! | AATCCTTAAAGAGTGCTCTT+AGG | - | chr8_4:14703205-14703224 | Msa1315350:intron | 35.0% |
! | ACTGGTTTCTATACGAAACT+TGG | + | chr8_4:14703291-14703310 | None:intergenic | 35.0% |
AAACCAGTAATCTGATGGTA+TGG | - | chr8_4:14703303-14703322 | Msa1315350:intron | 35.0% | |
AAATAAGAGAGCTTAGAGAG+AGG | + | chr8_4:14703428-14703447 | None:intergenic | 35.0% | |
GTAACTGATAAGCTCTCATA+AGG | - | chr8_4:14703514-14703533 | Msa1315350:intron | 35.0% | |
AAGGTAGAAGCTAATCCAAA+CGG | - | chr8_4:14703533-14703552 | Msa1315350:intron | 35.0% | |
AAAAACACTAAGAACCCGTT+TGG | + | chr8_4:14703551-14703570 | None:intergenic | 35.0% | |
!!! | ACGGGTTCTTAGTGTTTTTT+TGG | - | chr8_4:14703552-14703571 | Msa1315350:intron | 35.0% |
CTTTCAATGTATTTCAGGAG+AGG | - | chr8_4:14703923-14703942 | Msa1315350:CDS | 35.0% | |
ACCTATATCAACTTATCCGA+AGG | - | chr8_4:14704054-14704073 | Msa1315350:five_prime_UTR | 35.0% | |
!! | TCCTTCGGATAAGTTGATAT+AGG | + | chr8_4:14704058-14704077 | None:intergenic | 35.0% |
AGTCATGAATTCTCATCCTT+CGG | + | chr8_4:14704073-14704092 | None:intergenic | 35.0% | |
GATACAAAAGCAAATAGCAG+TGG | - | chr8_4:14704122-14704141 | Msa1315350:five_prime_UTR | 35.0% | |
! | TATTTTCATTTGGGAGGTAG+TGG | - | chr8_4:14704198-14704217 | Msa1315350:five_prime_UTR | 35.0% |
TTGATACTGTACCTAATTGG+GGG | + | chr8_4:14704261-14704280 | None:intergenic | 35.0% | |
CTTGATACTGTACCTAATTG+GGG | + | chr8_4:14704262-14704281 | None:intergenic | 35.0% | |
GCTTGATACTGTACCTAATT+GGG | + | chr8_4:14704263-14704282 | None:intergenic | 35.0% | |
TGCTTGATACTGTACCTAAT+TGG | + | chr8_4:14704264-14704283 | None:intergenic | 35.0% | |
! | TTTAAACCTTAGTTTGGGTC+TGG | - | chr8_4:14704355-14704374 | Msa1315350:five_prime_UTR | 35.0% |
!!! | GAGCTTTGTTTTGAAGCTCA+AGG | - | chr8_4:14692960-14692979 | Msa1315350:CDS | 40.0% |
AGGGATCTGAATTGTGATGA+TGG | - | chr8_4:14692980-14692999 | Msa1315350:CDS | 40.0% | |
GATGGAGATTGAAGAAGAGA+AGG | - | chr8_4:14692998-14693017 | Msa1315350:CDS | 40.0% | |
GAGATTGAAGAAGAGAAGGT+GGG | - | chr8_4:14693002-14693021 | Msa1315350:CDS | 40.0% | |
AGATTGAAGAAGAGAAGGTG+GGG | - | chr8_4:14693003-14693022 | Msa1315350:CDS | 40.0% | |
TAGGCTCTATGAAACTTCTC+AGG | - | chr8_4:14693103-14693122 | Msa1315350:intron | 40.0% | |
TCTGTTTAATTGGATTCGCG+TGG | - | chr8_4:14693491-14693510 | Msa1315350:intron | 40.0% | |
AAGAAAACATGGATCCATCC+AGG | - | chr8_4:14693521-14693540 | Msa1315350:intron | 40.0% | |
! | CCATTGTTTTCAGATTGTGG+GGG | - | chr8_4:14693672-14693691 | Msa1315350:intron | 40.0% |
AGTCGGCAAAAAGTAATAGG+GGG | + | chr8_4:14693965-14693984 | None:intergenic | 40.0% | |
! | CCATTTTCAGCCAAAGATTC+TGG | + | chr8_4:14694251-14694270 | None:intergenic | 40.0% |
CCAGAATCTTTGGCTGAAAA+TGG | - | chr8_4:14694248-14694267 | Msa1315350:intron | 40.0% | |
TTTGGCTGAAAATGGGGAAA+AGG | - | chr8_4:14694256-14694275 | Msa1315350:intron | 40.0% | |
!! | AAAATGCCGCTTTCTTCTTC+TGG | - | chr8_4:14694306-14694325 | Msa1315350:intron | 40.0% |
CCATTTCCAGAAGAAGAAAG+CGG | + | chr8_4:14694315-14694334 | None:intergenic | 40.0% | |
! | CGCTTTCTTCTTCTGGAAAT+GGG | - | chr8_4:14694313-14694332 | Msa1315350:intron | 40.0% |
TTATCTGTGGGAGAAAAGGA+AGG | + | chr8_4:14694352-14694371 | None:intergenic | 40.0% | |
AACAAATTTAAGCCCTCCTG+TGG | + | chr8_4:14694860-14694879 | None:intergenic | 40.0% | |
ATTACAAAGCGGAGGAAGAT+CGG | - | chr8_4:14695076-14695095 | Msa1315350:intron | 40.0% | |
TTTGATCGCACACTTGAATG+TGG | + | chr8_4:14695157-14695176 | None:intergenic | 40.0% | |
AGTACCACAGAAAGATGAGA+GGG | + | chr8_4:14695502-14695521 | None:intergenic | 40.0% | |
AGTTCTTAACTCGTGGAATC+AGG | - | chr8_4:14696044-14696063 | Msa1315350:intron | 40.0% | |
GAAGTTAATTAGTACGGTGC+TGG | - | chr8_4:14696159-14696178 | Msa1315350:intron | 40.0% | |
! | CATATCACTAGGCTCTTTTC+TGG | + | chr8_4:14696347-14696366 | None:intergenic | 40.0% |
CATTACATGGTATCACGTGT+AGG | - | chr8_4:14696410-14696429 | Msa1315350:CDS | 40.0% | |
CGAGTGTACCTATACTATAC+CGG | - | chr8_4:14696620-14696639 | Msa1315350:intron | 40.0% | |
TGAAACGAGGAGTCAATGAA+AGG | - | chr8_4:14696809-14696828 | Msa1315350:intron | 40.0% | |
GAAACGAGGAGTCAATGAAA+GGG | - | chr8_4:14696810-14696829 | Msa1315350:intron | 40.0% | |
AAACGAGGAGTCAATGAAAG+GGG | - | chr8_4:14696811-14696830 | Msa1315350:intron | 40.0% | |
!! | CACAGAACTGATTTGCATTG+GGG | + | chr8_4:14696896-14696915 | None:intergenic | 40.0% |
!! | CCACAGAACTGATTTGCATT+GGG | + | chr8_4:14696897-14696916 | None:intergenic | 40.0% |
!! | ACCACAGAACTGATTTGCAT+TGG | + | chr8_4:14696898-14696917 | None:intergenic | 40.0% |
AAGCACTTGGGAGACTATTT+GGG | + | chr8_4:14697290-14697309 | None:intergenic | 40.0% | |
TAAGCACTTGGGAGACTATT+TGG | + | chr8_4:14697291-14697310 | None:intergenic | 40.0% | |
ATCTACTGGCATAAGCACTT+GGG | + | chr8_4:14697302-14697321 | None:intergenic | 40.0% | |
TATCTACTGGCATAAGCACT+TGG | + | chr8_4:14697303-14697322 | None:intergenic | 40.0% | |
AGCCAATCCAATTTCCAAAC+AGG | - | chr8_4:14697333-14697352 | Msa1315350:intron | 40.0% | |
ATATGGGCCTGTTTGGAAAT+TGG | + | chr8_4:14697343-14697362 | None:intergenic | 40.0% | |
! | AGTCTTGTGGCTTCAAACAT+TGG | + | chr8_4:14697424-14697443 | None:intergenic | 40.0% |
TAGGCATTTCTACACGTGTA+AGG | - | chr8_4:14697506-14697525 | Msa1315350:intron | 40.0% | |
ATCTTCATTGGGATCTGACT+TGG | - | chr8_4:14697715-14697734 | Msa1315350:CDS | 40.0% | |
GGACAAAAACCTATTGAGCA+TGG | + | chr8_4:14697775-14697794 | None:intergenic | 40.0% | |
! | TGCTCAATAGGTTTTTGTCC+CGG | - | chr8_4:14697775-14697794 | Msa1315350:intron | 40.0% |
ACCAATGTGCTTTCACAACT+GGG | - | chr8_4:14697844-14697863 | Msa1315350:intron | 40.0% | |
GAATATGGGAATAATCCCTC+TGG | + | chr8_4:14697937-14697956 | None:intergenic | 40.0% | |
GCATTAGTACAACAGCAAAG+AGG | + | chr8_4:14697996-14698015 | None:intergenic | 40.0% | |
AAGCACTCACATTCCAATTG+TGG | + | chr8_4:14698074-14698093 | None:intergenic | 40.0% | |
TTACAGTGTCAAAGCCAAGA+CGG | - | chr8_4:14698271-14698290 | Msa1315350:intron | 40.0% | |
TAAACCCAAATGCATGTAGC+TGG | + | chr8_4:14698388-14698407 | None:intergenic | 40.0% | |
GGGTTGCCAAGTTTAATATG+TGG | + | chr8_4:14698419-14698438 | None:intergenic | 40.0% | |
ATGATCTTCAACTCACTAGG+GGG | + | chr8_4:14698757-14698776 | None:intergenic | 40.0% | |
GATGATCTTCAACTCACTAG+GGG | + | chr8_4:14698758-14698777 | None:intergenic | 40.0% | |
TCTATTGTTGGCATGTGAAG+TGG | + | chr8_4:14698797-14698816 | None:intergenic | 40.0% | |
TGTGTGTGAGCTTCTATTGT+TGG | + | chr8_4:14698809-14698828 | None:intergenic | 40.0% | |
TAGAAGTAGAGGTCAATGGA+AGG | - | chr8_4:14699227-14699246 | Msa1315350:intron | 40.0% | |
TAGGGTTCGAATAAGCTCTT+GGG | + | chr8_4:14699265-14699284 | None:intergenic | 40.0% | |
ACATGCATAGTTGCTTCCAT+AGG | - | chr8_4:14699376-14699395 | Msa1315350:intron | 40.0% | |
TTGGACCATGACTTCCAAAA+AGG | + | chr8_4:14699560-14699579 | None:intergenic | 40.0% | |
CATGGTCCAAATTTAGCAGA+TGG | - | chr8_4:14699570-14699589 | Msa1315350:intron | 40.0% | |
CAATCCGATGGCAATATTCT+CGG | - | chr8_4:14700171-14700190 | Msa1315350:intron | 40.0% | |
TTCACCGAGAATATTGCCAT+CGG | + | chr8_4:14700178-14700197 | None:intergenic | 40.0% | |
GTGAAAGTGACTCTACAACT+AGG | - | chr8_4:14700193-14700212 | Msa1315350:intron | 40.0% | |
CCACAAGTAGACTTCAATAG+AGG | + | chr8_4:14700282-14700301 | None:intergenic | 40.0% | |
CCTCTATTGAAGTCTACTTG+TGG | - | chr8_4:14700279-14700298 | Msa1315350:intron | 40.0% | |
GAACTTCTATCTGTCAATGC+AGG | - | chr8_4:14700301-14700320 | Msa1315350:intron | 40.0% | |
AGGCAAGTTTATGCAGGAAT+GGG | - | chr8_4:14700446-14700465 | Msa1315350:intron | 40.0% | |
GTGAAGAAGAACTACTTGAC+AGG | - | chr8_4:14700579-14700598 | Msa1315350:intron | 40.0% | |
TGTAGTTCCGAGACTTTGTT+TGG | - | chr8_4:14700602-14700621 | Msa1315350:intron | 40.0% | |
TTCGCAAAATTGCATGAGAG+CGG | + | chr8_4:14701185-14701204 | None:intergenic | 40.0% | |
GGAAGACATGAAAAAGAGAG+CGG | - | chr8_4:14701228-14701247 | Msa1315350:intron | 40.0% | |
GAAGACATGAAAAAGAGAGC+GGG | - | chr8_4:14701229-14701248 | Msa1315350:intron | 40.0% | |
AAGACATGAAAAAGAGAGCG+GGG | - | chr8_4:14701230-14701249 | Msa1315350:intron | 40.0% | |
AAAAGGTGATTGCTAAGCTC+TGG | + | chr8_4:14701267-14701286 | None:intergenic | 40.0% | |
GCATATTGAAAGGATTCAGG+GGG | - | chr8_4:14701338-14701357 | Msa1315350:intron | 40.0% | |
! | GCACTTGTGATACTGTTTTG+GGG | - | chr8_4:14701401-14701420 | Msa1315350:CDS | 40.0% |
CAAACCCTAACTCAAGAACT+AGG | + | chr8_4:14702101-14702120 | None:intergenic | 40.0% | |
! | CTAGTTCTTGAGTTAGGGTT+TGG | - | chr8_4:14702099-14702118 | Msa1315350:CDS | 40.0% |
!! | GCCAATATTGTTGATGGTAC+AGG | - | chr8_4:14702155-14702174 | Msa1315350:CDS | 40.0% |
TGAACTAATAACTGAGGTGC+CGG | - | chr8_4:14702210-14702229 | Msa1315350:CDS | 40.0% | |
AAATGCTAACATGTGCCCTA+AGG | - | chr8_4:14702347-14702366 | Msa1315350:intron | 40.0% | |
AATGCTAACATGTGCCCTAA+GGG | - | chr8_4:14702348-14702367 | Msa1315350:intron | 40.0% | |
! | CTTGCTAACTTGTGCCATTA+GGG | + | chr8_4:14702513-14702532 | None:intergenic | 40.0% |
! | TCTTGCTAACTTGTGCCATT+AGG | + | chr8_4:14702514-14702533 | None:intergenic | 40.0% |
!! | CGATCTCTATTTTGTTGTCC+TGG | - | chr8_4:14702714-14702733 | Msa1315350:intron | 40.0% |
CAAAGCTTATCTGGCTACAT+GGG | - | chr8_4:14702893-14702912 | Msa1315350:intron | 40.0% | |
!!! | CATCTTACAAGCTGGTTTTC+CGG | - | chr8_4:14702933-14702952 | Msa1315350:intron | 40.0% |
AATGTTCGGGCACTCTTTAA+AGG | - | chr8_4:14703080-14703099 | Msa1315350:intron | 40.0% | |
!! | TGTCCTAAGAGCACTCTTTA+AGG | + | chr8_4:14703211-14703230 | None:intergenic | 40.0% |
TTGCCATACCATCAGATTAC+TGG | + | chr8_4:14703309-14703328 | None:intergenic | 40.0% | |
TCTGATGGTATGGCAATACA+TGG | - | chr8_4:14703313-14703332 | Msa1315350:intron | 40.0% | |
TGGCAATACATGGTGAATGA+TGG | - | chr8_4:14703323-14703342 | Msa1315350:intron | 40.0% | |
AGGTAGAAGCTAATCCAAAC+GGG | - | chr8_4:14703534-14703553 | Msa1315350:intron | 40.0% | |
CTTATTTCCATAAGCCCTCT+AGG | - | chr8_4:14703710-14703729 | Msa1315350:intron | 40.0% | |
! | TTTTCTAGGCTGCAACCAAT+TGG | - | chr8_4:14703886-14703905 | Msa1315350:CDS | 40.0% |
GATATAGGTCAGGAGACATT+AGG | + | chr8_4:14704043-14704062 | None:intergenic | 40.0% | |
!! | CGGATAAGTTGATATAGGTC+AGG | + | chr8_4:14704053-14704072 | None:intergenic | 40.0% |
TGATACTGTACCTAATTGGG+GGG | + | chr8_4:14704260-14704279 | None:intergenic | 40.0% | |
GGAGATTGAAGAAGAGAAGG+TGG | - | chr8_4:14693001-14693020 | Msa1315350:CDS | 45.0% | |
!!! | GTTGGTGCTGGTTTTGAAGA+TGG | - | chr8_4:14693047-14693066 | Msa1315350:intron | 45.0% |
! | GTGCAGTTTTCTTGTTCTGC+TGG | - | chr8_4:14693240-14693259 | Msa1315350:intron | 45.0% |
CCCCCACAATCTGAAAACAA+TGG | + | chr8_4:14693675-14693694 | None:intergenic | 45.0% | |
!! | TTTCAGATTGTGGGGGCATT+TGG | - | chr8_4:14693679-14693698 | Msa1315350:intron | 45.0% |
CAACATGCATGACACTGTGA+TGG | + | chr8_4:14694136-14694155 | None:intergenic | 45.0% | |
! | CCGCTTTCTTCTTCTGGAAA+TGG | - | chr8_4:14694312-14694331 | Msa1315350:intron | 45.0% |
AGACAAACGAAGTTCGTTGC+CGG | + | chr8_4:14694514-14694533 | None:intergenic | 45.0% | |
!! | ACGAAAGAGCACTATTGGTG+TGG | - | chr8_4:14694649-14694668 | Msa1315350:intron | 45.0% |
! | TGAAATGCTGAAGCGTCTAC+AGG | - | chr8_4:14694822-14694841 | Msa1315350:intron | 45.0% |
! | TGCTGCTTATTACAAAGCGG+AGG | - | chr8_4:14695068-14695087 | Msa1315350:intron | 45.0% |
AGGAAGATCGGCACAATATG+TGG | - | chr8_4:14695088-14695107 | Msa1315350:intron | 45.0% | |
CGCACACTTGAATGTGGAAT+TGG | + | chr8_4:14695151-14695170 | None:intergenic | 45.0% | |
TTCAGTGCGTATGCACAATG+TGG | - | chr8_4:14695461-14695480 | Msa1315350:intron | 45.0% | |
TCAGTGCGTATGCACAATGT+GGG | - | chr8_4:14695462-14695481 | Msa1315350:intron | 45.0% | |
!! | AAGATGAGAGGGTTGACTTG+AGG | + | chr8_4:14695491-14695510 | None:intergenic | 45.0% |
TCAACCCTCTCATCTTTCTG+TGG | - | chr8_4:14695495-14695514 | Msa1315350:intron | 45.0% | |
GAGTACCACAGAAAGATGAG+AGG | + | chr8_4:14695503-14695522 | None:intergenic | 45.0% | |
AGGTATTTCCAGGGTTCACA+TGG | - | chr8_4:14695721-14695740 | Msa1315350:intron | 45.0% | |
GGTATTTCCAGGGTTCACAT+GGG | - | chr8_4:14695722-14695741 | Msa1315350:intron | 45.0% | |
TGGAACGAGTTCTTAACTCG+TGG | - | chr8_4:14696037-14696056 | Msa1315350:intron | 45.0% | |
!! | CAACAGTCCAGGAAGTATTC+TGG | + | chr8_4:14696078-14696097 | None:intergenic | 45.0% |
ATAGACTAAGGCAACAGTCC+AGG | + | chr8_4:14696089-14696108 | None:intergenic | 45.0% | |
TGGACTGTTGCCTTAGTCTA+TGG | - | chr8_4:14696088-14696107 | Msa1315350:intron | 45.0% | |
!!! | CTCTTTTCTGGTGCTGTCAA+TGG | + | chr8_4:14696335-14696354 | None:intergenic | 45.0% |
ACTTGCGGCCAGATATAGAA+AGG | + | chr8_4:14696440-14696459 | None:intergenic | 45.0% | |
CATCTTTGCACTTGTGATCC+TGG | - | chr8_4:14696580-14696599 | Msa1315350:intron | 45.0% | |
ATTTGGCTGCCATTCCTTAC+TGG | - | chr8_4:14696674-14696693 | Msa1315350:CDS | 45.0% | |
! | TGGTGCAGGTATTTGAAACG+AGG | - | chr8_4:14696796-14696815 | Msa1315350:CDS | 45.0% |
GTCTTTGCAGATGCTAGTGA+TGG | - | chr8_4:14696868-14696887 | Msa1315350:intron | 45.0% | |
CCCAATGCAAATCAGTTCTG+TGG | - | chr8_4:14696894-14696913 | Msa1315350:intron | 45.0% | |
AAAAGAGAGGGATTGAACCC+CGG | + | chr8_4:14696927-14696946 | None:intergenic | 45.0% | |
! | AATCCCTCTCTTTTGGTCTC+AGG | - | chr8_4:14696933-14696952 | Msa1315350:intron | 45.0% |
CTTCCTGAGACCAAAAGAGA+GGG | + | chr8_4:14696939-14696958 | None:intergenic | 45.0% | |
GGCCTGTTTGGAAATTGGAT+TGG | + | chr8_4:14697338-14697357 | None:intergenic | 45.0% | |
GTTCGCAGAATAGTTTCACG+CGG | + | chr8_4:14697633-14697652 | None:intergenic | 45.0% | |
!! | CTTAACAGCATTGGCGAACT+CGG | + | chr8_4:14697655-14697674 | None:intergenic | 45.0% |
TGAGTAAGGAGGATTGTCTG+AGG | - | chr8_4:14697691-14697710 | Msa1315350:CDS | 45.0% | |
!! | ATCTGACTTGGCATTCGAGA+CGG | - | chr8_4:14697727-14697746 | Msa1315350:CDS | 45.0% |
! | GCTCAATAGGTTTTTGTCCC+GGG | - | chr8_4:14697776-14697795 | Msa1315350:intron | 45.0% |
! | CAGTTGTGAAAGCACATTGG+TGG | + | chr8_4:14697845-14697864 | None:intergenic | 45.0% |
CACCAATGTGCTTTCACAAC+TGG | - | chr8_4:14697843-14697862 | Msa1315350:intron | 45.0% | |
! | TCCCAGTTGTGAAAGCACAT+TGG | + | chr8_4:14697848-14697867 | None:intergenic | 45.0% |
GCTTTCACAACTGGGAAAAG+TGG | - | chr8_4:14697852-14697871 | Msa1315350:intron | 45.0% | |
ATGTTCGCGTTGAATCTGAC+TGG | - | chr8_4:14697877-14697896 | Msa1315350:intron | 45.0% | |
ACACCAAACATGAGTCCAGA+GGG | - | chr8_4:14697919-14697938 | Msa1315350:intron | 45.0% | |
AATCCCTCTGGACTCATGTT+TGG | + | chr8_4:14697925-14697944 | None:intergenic | 45.0% | |
AAAGCCAAGACGGTTCAATC+AGG | - | chr8_4:14698281-14698300 | Msa1315350:intron | 45.0% | |
CATACTGTGCAACATTGGTG+CGG | + | chr8_4:14698340-14698359 | None:intergenic | 45.0% | |
TGCAGAACCCCCATATTGAA+AGG | + | chr8_4:14698492-14698511 | None:intergenic | 45.0% | |
!!! | AAGAGTGCTCCTTTTACGAG+AGG | + | chr8_4:14699036-14699055 | None:intergenic | 45.0% |
GTAGGGTTCGAATAAGCTCT+TGG | + | chr8_4:14699266-14699285 | None:intergenic | 45.0% | |
!!! | AGTACTGGTTTTCCCTGTTG+TGG | + | chr8_4:14699510-14699529 | None:intergenic | 45.0% |
AACAGGGAAAACCAGTACTG+TGG | - | chr8_4:14699511-14699530 | Msa1315350:CDS | 45.0% | |
GAATCAAGCTTCCACAGTAC+TGG | + | chr8_4:14699525-14699544 | None:intergenic | 45.0% | |
TGAACTAAACTCAGAGCTGC+CGG | + | chr8_4:14699802-14699821 | None:intergenic | 45.0% | |
CAGGCAAGTTTATGCAGGAA+TGG | - | chr8_4:14700445-14700464 | Msa1315350:intron | 45.0% | |
AGTTTATGCAGGAATGGGCA+AGG | - | chr8_4:14700451-14700470 | Msa1315350:intron | 45.0% | |
CTGCTCCAATTTCCTTGATG+TGG | - | chr8_4:14700529-14700548 | Msa1315350:intron | 45.0% | |
CCAGTCCACATCAAGGAAAT+TGG | + | chr8_4:14700537-14700556 | None:intergenic | 45.0% | |
CCAATTTCCTTGATGTGGAC+TGG | - | chr8_4:14700534-14700553 | Msa1315350:intron | 45.0% | |
AAGAAAGCCAGTCCACATCA+AGG | + | chr8_4:14700544-14700563 | None:intergenic | 45.0% | |
!!! | GAACGCAACTTTTGAGGTTC+AGG | + | chr8_4:14700830-14700849 | None:intergenic | 45.0% |
GAGGCCTAAAGCAACTTCTT+AGG | - | chr8_4:14701020-14701039 | Msa1315350:CDS | 45.0% | |
! | GTGGCCTAAGAAGTTGCTTT+AGG | + | chr8_4:14701027-14701046 | None:intergenic | 45.0% |
GATGTGGAATTAGGAGGGAA+TGG | - | chr8_4:14701920-14701939 | Msa1315350:CDS | 45.0% | |
ATAGGTCCAGATTCACTTGC+CGG | + | chr8_4:14702232-14702251 | None:intergenic | 45.0% | |
! | AACTTGTGCCATTAGGGCAA+GGG | + | chr8_4:14702507-14702526 | None:intergenic | 45.0% |
! | TAACTTGTGCCATTAGGGCA+AGG | + | chr8_4:14702508-14702527 | None:intergenic | 45.0% |
TCATTGGGCCAAAGCTTATC+TGG | - | chr8_4:14702884-14702903 | Msa1315350:intron | 45.0% | |
CCATGTAGCCAGATAAGCTT+TGG | + | chr8_4:14702895-14702914 | None:intergenic | 45.0% | |
CCAAAGCTTATCTGGCTACA+TGG | - | chr8_4:14702892-14702911 | Msa1315350:intron | 45.0% | |
AAGCAATCCTAGAGGGCTTA+TGG | + | chr8_4:14703720-14703739 | None:intergenic | 45.0% | |
AAGCAAATAGCAGTGGCAGA+AGG | - | chr8_4:14704129-14704148 | Msa1315350:five_prime_UTR | 45.0% | |
GATACTGTACCTAATTGGGG+GGG | + | chr8_4:14704259-14704278 | None:intergenic | 45.0% | |
! | AAACCTTAGTTTGGGTCTGG+CGG | - | chr8_4:14704358-14704377 | Msa1315350:five_prime_UTR | 45.0% |
GATGCACATAAGATGAGGAC+TGG | + | chr8_4:14704388-14704407 | None:intergenic | 45.0% | |
!!! | GATTTATTTTTTTTTTTTTA+TGG | - | chr8_4:14693378-14693397 | Msa1315350:intron | 5.0% |
!!! | TATTATTATTATTTTTCAAA+CGG | + | chr8_4:14694981-14695000 | None:intergenic | 5.0% |
! | AGTGCTGCTGGTGTTGAAGT+TGG | - | chr8_4:14693029-14693048 | Msa1315350:intron | 50.0% |
ATCCATCCAGGTTACCTGCT+TGG | - | chr8_4:14693533-14693552 | Msa1315350:intron | 50.0% | |
TTCAAGCCAAGCAGGTAACC+TGG | + | chr8_4:14693542-14693561 | None:intergenic | 50.0% | |
ACATTGCGCACTTGCGACAA+GGG | + | chr8_4:14694458-14694477 | None:intergenic | 50.0% | |
! | ATGCTGAAGCGTCTACAGGA+TGG | - | chr8_4:14694826-14694845 | Msa1315350:intron | 50.0% |
GCGTCTACAGGATGGAAACT+TGG | - | chr8_4:14694834-14694853 | Msa1315350:intron | 50.0% | |
ATGGAAACTTGGCCACAGGA+GGG | - | chr8_4:14694845-14694864 | Msa1315350:intron | 50.0% | |
TTACCATTGCTAGGCGCTCA+CGG | - | chr8_4:14696469-14696488 | Msa1315350:CDS | 50.0% | |
TCAGTTCTGTGGTGCAGATC+CGG | - | chr8_4:14696905-14696924 | Msa1315350:intron | 50.0% | |
! | GGGGTTCAATCCCTCTCTTT+TGG | - | chr8_4:14696926-14696945 | Msa1315350:intron | 50.0% |
GCTTCCTGAGACCAAAAGAG+AGG | + | chr8_4:14696940-14696959 | None:intergenic | 50.0% | |
!! | GGACTCATGTTTGGTGTCAC+TGG | + | chr8_4:14697916-14697935 | None:intergenic | 50.0% |
GACACCAAACATGAGTCCAG+AGG | - | chr8_4:14697918-14697937 | Msa1315350:intron | 50.0% | |
CCAATTGTGGTTGCCACAGA+TGG | + | chr8_4:14698061-14698080 | None:intergenic | 50.0% | |
CCATCTGTGGCAACCACAAT+TGG | - | chr8_4:14698058-14698077 | Msa1315350:intron | 50.0% | |
GACGCCAGCTACATGCATTT+GGG | - | chr8_4:14698381-14698400 | Msa1315350:intron | 50.0% | |
ACTTGGCAACCCTTTGGCAA+AGG | - | chr8_4:14698427-14698446 | Msa1315350:intron | 50.0% | |
AAAGGCTAATGTGTCGCCCA+TGG | + | chr8_4:14698474-14698493 | None:intergenic | 50.0% | |
TAGAGGTCAATGGAAGGCAG+CGG | - | chr8_4:14699233-14699252 | Msa1315350:intron | 50.0% | |
TATTTCGATCTGTCCGCAGC+CGG | - | chr8_4:14699780-14699799 | Msa1315350:intron | 50.0% | |
TCAGATGAGTACGGACAGTC+TGG | + | chr8_4:14700231-14700250 | None:intergenic | 50.0% | |
GCTGGAACCGCTTCTCATTT+AGG | + | chr8_4:14700662-14700681 | None:intergenic | 50.0% | |
TCACAGCCAGCACAAGCATT+AGG | + | chr8_4:14701049-14701068 | None:intergenic | 50.0% | |
! | ACTGCTGGCTAGGCAACAAA+AGG | + | chr8_4:14701284-14701303 | None:intergenic | 50.0% |
TTGCCTAGCCAGCAGTACAT+CGG | - | chr8_4:14701288-14701307 | Msa1315350:intron | 50.0% | |
! | TAGGGCAAGGGCACATGTTA+AGG | + | chr8_4:14702495-14702514 | None:intergenic | 50.0% |
AACATGTGCCCTTGCCCTAA+TGG | - | chr8_4:14702496-14702515 | Msa1315350:intron | 50.0% | |
ATGGGTGACTCTTAACACCC+AGG | + | chr8_4:14702735-14702754 | None:intergenic | 50.0% | |
GGGTGTTAAGAGTCACCCAT+TGG | - | chr8_4:14702735-14702754 | Msa1315350:intron | 50.0% | |
CGGGGCATATCTCATCCAAT+GGG | + | chr8_4:14702753-14702772 | None:intergenic | 50.0% | |
TCGGGGCATATCTCATCCAA+TGG | + | chr8_4:14702754-14702773 | None:intergenic | 50.0% | |
!! | GCTGGTGTTGAAGTTGGTGC+TGG | - | chr8_4:14693035-14693054 | Msa1315350:intron | 55.0% |
AGCCAAGCAGGTAACCTGGA+TGG | + | chr8_4:14693538-14693557 | None:intergenic | 55.0% | |
CACATTGCGCACTTGCGACA+AGG | + | chr8_4:14694459-14694478 | None:intergenic | 55.0% | |
CAGGATGGAAACTTGGCCAC+AGG | - | chr8_4:14694841-14694860 | Msa1315350:intron | 55.0% | |
GATGGAAACTTGGCCACAGG+AGG | - | chr8_4:14694844-14694863 | Msa1315350:intron | 55.0% | |
TCCAGGGTTCACATGGGAGA+CGG | - | chr8_4:14695728-14695747 | Msa1315350:intron | 55.0% | |
CAGTTCTGTGGTGCAGATCC+GGG | - | chr8_4:14696906-14696925 | Msa1315350:intron | 55.0% | |
AGTTCTGTGGTGCAGATCCG+GGG | - | chr8_4:14696907-14696926 | Msa1315350:intron | 55.0% | |
GACGCCTGATTGAACCGTCT+TGG | + | chr8_4:14698288-14698307 | None:intergenic | 55.0% | |
CGGTTCAATCAGGCGTCTTG+AGG | - | chr8_4:14698291-14698310 | Msa1315350:intron | 55.0% | |
GCTTATGGACTCGTCGCACT+AGG | - | chr8_4:14698359-14698378 | Msa1315350:intron | 55.0% | |
GGACGCCAGCTACATGCATT+TGG | - | chr8_4:14698380-14698399 | Msa1315350:intron | 55.0% | |
GGGCATTTCCAGCCACAACA+GGG | - | chr8_4:14699495-14699514 | Msa1315350:CDS | 55.0% | |
!! | CTGGTTTTCCCTGTTGTGGC+TGG | + | chr8_4:14699506-14699525 | None:intergenic | 55.0% |
AGGCCACCTAATGCTTGTGC+TGG | - | chr8_4:14701040-14701059 | Msa1315350:CDS | 55.0% | |
CAGCCAGCACAAGCATTAGG+TGG | + | chr8_4:14701046-14701065 | None:intergenic | 55.0% | |
TGCCTAGCCAGCAGTACATC+GGG | - | chr8_4:14701289-14701308 | Msa1315350:intron | 55.0% | |
! | TTCCCGATGTACTGCTGGCT+AGG | + | chr8_4:14701294-14701313 | None:intergenic | 55.0% |
AAGGCTTCCCGATGTACTGC+TGG | + | chr8_4:14701299-14701318 | None:intergenic | 55.0% | |
TTTGTGCCTCCCCCCCAATT+AGG | - | chr8_4:14704247-14704266 | Msa1315350:five_prime_UTR | 55.0% | |
ACTGTACCTAATTGGGGGGG+AGG | + | chr8_4:14704256-14704275 | None:intergenic | 55.0% | |
! | CTTAGTTTGGGTCTGGCGGT+CGG | - | chr8_4:14704362-14704381 | Msa1315350:five_prime_UTR | 55.0% |
! | AAGGTGGGGACAAGTGCTGC+TGG | - | chr8_4:14693017-14693036 | Msa1315350:CDS | 60.0% |
GCGACGTTGCACGTCATGCA+TGG | + | chr8_4:14694434-14694453 | None:intergenic | 60.0% | |
GGGTTCTGCAGCGCACAACA+AGG | - | chr8_4:14698502-14698521 | Msa1315350:CDS | 60.0% | |
! | GGGGCATTTCCAGCCACAAC+AGG | - | chr8_4:14699494-14699513 | Msa1315350:CDS | 60.0% |
! | AAACTCAGAGCTGCCGGCTG+CGG | + | chr8_4:14699796-14699815 | None:intergenic | 60.0% |
!! | GAGGTGCCGGCAAGTGAATC+TGG | - | chr8_4:14702223-14702242 | Msa1315350:CDS | 60.0% |
CGACCGCCAGACCCAAACTA+AGG | + | chr8_4:14704364-14704383 | None:intergenic | 60.0% | |
GCCGTCTCCCATGTGAACCC+TGG | + | chr8_4:14695732-14695751 | None:intergenic | 65.0% | |
GTGCCGTGAGCGCCTAGCAA+TGG | + | chr8_4:14696475-14696494 | None:intergenic | 65.0% | |
AGGCGCTCACGGCACTATGC+TGG | - | chr8_4:14696480-14696499 | Msa1315350:CDS | 65.0% | |
GGCGCTCACGGCACTATGCT+GGG | - | chr8_4:14696481-14696500 | Msa1315350:CDS | 65.0% | |
CACGGCACTATGCTGGGACC+AGG | - | chr8_4:14696487-14696506 | Msa1315350:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 14692539 | 14704438 | 14692539 | ID=Msa1315350;Name=Msa1315350 |
chr8_4 | mRNA | 14692539 | 14704438 | 14692539 | ID=Msa1315350-mRNA-1;Parent=Msa1315350;Name=Msa1315350-mRNA-1;_AED=0.17;_eAED=0.17;_QI=457|0.81|0.82|1|1|1|17|406|850 |
chr8_4 | exon | 14692539 | 14693037 | 14692539 | ID=Msa1315350-mRNA-1:exon:5589;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14694719 | 14694800 | 14694719 | ID=Msa1315350-mRNA-1:exon:5588;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14696377 | 14696529 | 14696377 | ID=Msa1315350-mRNA-1:exon:5587;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14696655 | 14696825 | 14696655 | ID=Msa1315350-mRNA-1:exon:5586;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14697376 | 14697489 | 14697376 | ID=Msa1315350-mRNA-1:exon:5585;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14697637 | 14697758 | 14697637 | ID=Msa1315350-mRNA-1:exon:5584;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14698454 | 14698823 | 14698454 | ID=Msa1315350-mRNA-1:exon:5583;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14699012 | 14699158 | 14699012 | ID=Msa1315350-mRNA-1:exon:5582;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14699265 | 14699362 | 14699265 | ID=Msa1315350-mRNA-1:exon:5581;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14699473 | 14699570 | 14699473 | ID=Msa1315350-mRNA-1:exon:5580;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14699986 | 14700173 | 14699986 | ID=Msa1315350-mRNA-1:exon:5579;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14700469 | 14700545 | 14700469 | ID=Msa1315350-mRNA-1:exon:5578;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14700854 | 14701079 | 14700854 | ID=Msa1315350-mRNA-1:exon:5577;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14701398 | 14701511 | 14701398 | ID=Msa1315350-mRNA-1:exon:5576;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14701774 | 14701939 | 14701774 | ID=Msa1315350-mRNA-1:exon:5575;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14702076 | 14702280 | 14702076 | ID=Msa1315350-mRNA-1:exon:5574;Parent=Msa1315350-mRNA-1 |
chr8_4 | exon | 14703853 | 14704438 | 14703853 | ID=Msa1315350-mRNA-1:exon:5573;Parent=Msa1315350-mRNA-1 |
chr8_4 | five_prime_UTR | 14703982 | 14704438 | 14703982 | ID=Msa1315350-mRNA-1:five_prime_utr;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14703853 | 14703981 | 14703853 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14702076 | 14702280 | 14702076 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14701774 | 14701939 | 14701774 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14701398 | 14701511 | 14701398 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14700854 | 14701079 | 14700854 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14700469 | 14700545 | 14700469 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14699986 | 14700173 | 14699986 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14699473 | 14699570 | 14699473 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14699265 | 14699362 | 14699265 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14699012 | 14699158 | 14699012 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14698454 | 14698823 | 14698454 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14697637 | 14697758 | 14697637 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14697376 | 14697489 | 14697376 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14696655 | 14696825 | 14696655 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14696377 | 14696529 | 14696377 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14694719 | 14694800 | 14694719 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | CDS | 14692945 | 14693037 | 14692945 | ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1 |
chr8_4 | three_prime_UTR | 14692539 | 14692944 | 14692539 | ID=Msa1315350-mRNA-1:three_prime_utr;Parent=Msa1315350-mRNA-1 |
Gene Sequence |
Protein sequence |