AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1315350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315350 MtrunA17_Chr8g0344911 91.238 856 30 4 1 850 1 817 0.0 1568
Msa1315350 MtrunA17_Chr4g0069981 56.157 869 281 15 28 848 21 837 0.0 908
Msa1315350 MtrunA17_Chr4g0014511 44.608 816 359 14 33 804 42 808 0.0 645
Msa1315350 MtrunA17_Chr5g0406801 28.155 309 171 9 104 408 63 324 4.47e-22 101
Msa1315350 MtrunA17_Chr5g0406801 37.984 129 78 2 531 658 389 516 2.92e-14 76.6
Msa1315350 MtrunA17_Chr4g0045791 29.231 195 117 5 250 426 179 370 2.83e-14 77.4
Msa1315350 MtrunA17_Chr7g0242661 29.927 137 94 2 531 666 196 331 3.68e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315350 AT3G14205.1 52.103 856 304 12 26 842 12 800 0.0 820
Msa1315350 AT5G20840.1 50.640 859 328 15 33 848 24 829 0.0 779
Msa1315350 AT3G43220.1 49.536 862 329 15 33 848 15 816 0.0 756
Msa1315350 AT3G43220.3 49.249 865 322 15 33 848 15 811 0.0 752
Msa1315350 AT3G43220.2 55.797 690 226 9 33 701 15 646 0.0 722
Msa1315350 AT1G22620.1 50.522 671 262 10 33 683 34 654 0.0 646
Msa1315350 AT1G17340.1 49.115 678 274 9 33 702 19 633 0.0 617
Msa1315350 AT3G14205.2 51.682 654 248 11 228 842 1 625 0.0 598
Msa1315350 AT3G51830.1 23.010 578 327 17 93 660 50 519 1.12e-29 125
Msa1315350 AT5G66020.1 25.305 328 186 8 104 424 59 334 6.64e-23 104
Msa1315350 AT5G66020.1 37.398 123 75 2 531 652 386 507 2.32e-13 74.3
Msa1315350 AT3G51460.1 26.154 325 186 10 104 424 62 336 6.04e-22 101
Msa1315350 AT3G51460.1 36.585 123 76 2 531 652 388 509 6.48e-13 72.8
Msa1315350 AT3G59770.1 28.718 195 118 5 250 426 181 372 8.66e-16 82.8
Msa1315350 AT3G59770.3 28.718 195 118 5 250 426 181 372 8.68e-16 82.8
Msa1315350 AT3G59770.4 28.402 169 101 4 276 426 3 169 9.23e-13 73.2
Msa1315350 AT3G59770.2 29.530 149 86 3 295 426 1 147 1.02e-12 72.8

Find 199 sgRNAs with CRISPR-Local

Find 673 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTCCATCTGCTAAATT+TGG 0.146934 8_4:+14697379 None:intergenic
ATACTGAAAGCTTTGAAAAT+TGG 0.147538 8_4:-14692975 Msa1315350:CDS
TTCAAGTGTGCGATCAAATT+TGG 0.181811 8_4:-14701796 Msa1315350:CDS
ATCAAGTTCAGTATAATAAT+TGG 0.185083 8_4:+14699477 None:intergenic
GACACATTAGCCTTTCAATA+TGG 0.211695 8_4:-14698476 Msa1315350:CDS
TGGACTGTTGCCTTAGTCTA+TGG 0.221556 8_4:-14700867 Msa1315350:CDS
TGCTTGATACTGTACCTAAT+TGG 0.234689 8_4:+14692694 None:intergenic
TCCAAAAGAGATTGCTTATC+AGG 0.251218 8_4:+14696700 None:intergenic
TCCTGATAAGCAATCTCTTT+TGG 0.253320 8_4:-14696701 Msa1315350:CDS
ACTTACTCAGAAAAGGAATA+TGG 0.268444 8_4:+14699006 None:intergenic
TACTGAAAGCTTTGAAAATT+GGG 0.269078 8_4:-14692974 Msa1315350:CDS
TATATGAAACACTGTTTGTT+TGG 0.269818 8_4:-14700938 Msa1315350:CDS
CCAGTCCACATCAAGGAAAT+TGG 0.290418 8_4:+14696421 None:intergenic
TATTATACTGAACTTGATTA+AGG 0.305053 8_4:-14699472 Msa1315350:intron
GAGAATCTTGTCATGAGATA+TGG 0.308963 8_4:-14699504 Msa1315350:CDS
TTGGACCATGACTTCCAAAA+AGG 0.315276 8_4:+14697398 None:intergenic
AGGCGCTCACGGCACTATGC+TGG 0.316310 8_4:-14700475 Msa1315350:CDS
CACCAATGTGCTTTCACAAC+TGG 0.330680 8_4:-14699112 Msa1315350:CDS
AGTCTTCAAAAGAACTTATC+TGG 0.334802 8_4:-14700984 Msa1315350:CDS
GGGGTTCAATCCCTCTCTTT+TGG 0.336187 8_4:-14700029 Msa1315350:CDS
GGACGCCAGCTACATGCATT+TGG 0.338791 8_4:-14698575 Msa1315350:CDS
TAGGTTAACCTTTCTATATC+TGG 0.339638 8_4:-14700526 Msa1315350:CDS
CTTTGCTGTACAGAAATAAA+TGG 0.340460 8_4:-14692864 Msa1315350:three_prime_UTR
GCTTGATACTGTACCTAATT+GGG 0.346525 8_4:+14692695 None:intergenic
GCTGATAAGGAAACAGAAAA+TGG 0.350899 8_4:-14698743 Msa1315350:CDS
TCAGTTCTGTGGTGCAGATC+CGG 0.364139 8_4:-14700050 Msa1315350:CDS
TGAATCTGGACCTATCTTAA+AGG 0.365639 8_4:-14694718 Msa1315350:intron
CGCACACTTGAATGTGGAAT+TGG 0.369716 8_4:+14701807 None:intergenic
CAACAGTCCAGGAAGTATTC+TGG 0.370306 8_4:+14700880 None:intergenic
GAGGTGCCGGCAAGTGAATC+TGG 0.372008 8_4:-14694732 Msa1315350:CDS
CAAGAAGTTTCTATGCAGTA+TGG 0.374428 8_4:-14701054 Msa1315350:CDS
CCAATTTCCTTGATGTGGAC+TGG 0.383314 8_4:-14696421 Msa1315350:CDS
GGGGCATTTCCAGCCACAAC+AGG 0.392246 8_4:-14697461 Msa1315350:CDS
GACGCCAGCTACATGCATTT+GGG 0.393314 8_4:-14698574 Msa1315350:CDS
ACACATTAGCCTTTCAATAT+GGG 0.394386 8_4:-14698475 Msa1315350:CDS
GGTCTTAAAGATTGACAGAT+TGG 0.396654 8_4:-14702214 Msa1315350:CDS
GTAATAAGCAGCATGTAGTA+TGG 0.398368 8_4:+14701897 None:intergenic
AGTTCTTAACTCGTGGAATC+AGG 0.401648 8_4:-14700911 Msa1315350:CDS
GCTCAGAGATTCTATATGAT+TGG 0.401655 8_4:-14702264 Msa1315350:intron
CCACAGAACTGATTTGCATT+GGG 0.409148 8_4:+14700061 None:intergenic
TTTGCTACATGCAGAAGTTT+AGG 0.409804 8_4:-14703871 Msa1315350:CDS
TCAAGTTCAGTATAATAATT+GGG 0.410610 8_4:+14699478 None:intergenic
GGACTCATGTTTGGTGTCAC+TGG 0.418382 8_4:+14699042 None:intergenic
GCTGGTGTTGAAGTTGGTGC+TGG 0.420803 8_4:-14703920 Msa1315350:CDS
CAGTTCTGTGGTGCAGATCC+GGG 0.421189 8_4:-14700049 Msa1315350:CDS
AATCCCTCTGGACTCATGTT+TGG 0.422679 8_4:+14699033 None:intergenic
TATTAATAAAACTTTGAGTA+AGG 0.424613 8_4:-14699278 Msa1315350:CDS
AATTTAGCAGATGGAATTGA+TGG 0.425095 8_4:-14697376 Msa1315350:CDS
TCAGATGAGTACGGACAGTC+TGG 0.425148 8_4:+14696727 None:intergenic
ATAATCTCCAGAATACTTCC+TGG 0.425618 8_4:-14700887 Msa1315350:CDS
ATGTCAGGTTTCATATTCAA+TGG 0.429541 8_4:+14699991 None:intergenic
ATAGGTCCAGATTCACTTGC+CGG 0.430491 8_4:+14694726 None:intergenic
TTTAAACCTTAGTTTGGGTC+TGG 0.436286 8_4:-14692600 Msa1315350:three_prime_UTR
TTATTACAACAATACATATA+CGG 0.440751 8_4:-14697665 Msa1315350:CDS
AGCTCAAAACTTTACATCAA+TGG 0.447201 8_4:+14704146 None:intergenic
GAATCAAGCTTCCACAGTAC+TGG 0.448668 8_4:+14697433 None:intergenic
AATGTTGCACAGTATGCTTA+TGG 0.455792 8_4:-14698611 Msa1315350:CDS
TATTAAACTTGGCAACCCTT+TGG 0.458278 8_4:-14698534 Msa1315350:CDS
CTTACTCAGAAAAGGAATAT+GGG 0.464241 8_4:+14699007 None:intergenic
AATGAAAGTTTATGAGTCCA+TGG 0.465884 8_4:-14698501 Msa1315350:CDS
GATATAGGTCAGGAGACATT+AGG 0.466832 8_4:+14692915 None:intergenic
CAATCCGATGGCAATATTCT+CGG 0.471072 8_4:-14696784 Msa1315350:CDS
TTATGGTACTTACTCAGAAA+AGG 0.471405 8_4:+14698999 None:intergenic
CAGGCAAGTTTATGCAGGAA+TGG 0.478598 8_4:-14696510 Msa1315350:CDS
AGTCATGAATTCTCATCCTT+CGG 0.480296 8_4:+14692885 None:intergenic
AAATTTGTTACAACTTGCTA+TGG 0.480675 8_4:-14702084 Msa1315350:CDS
TAGGCTCTATGAAACTTCTC+AGG 0.480764 8_4:-14703852 Msa1315350:intron
TTTCTAGAAGTAGAGGTCAA+TGG 0.482402 8_4:-14697732 Msa1315350:CDS
TATTGTTGTAATAACGCTGT+AGG 0.483851 8_4:+14697674 None:intergenic
ATTAATAGACTTAACAGCAT+TGG 0.484492 8_4:+14699294 None:intergenic
GTAGGGTTCGAATAAGCTCT+TGG 0.486430 8_4:+14697692 None:intergenic
GAATCCCCACATATTAAACT+TGG 0.486919 8_4:-14698545 Msa1315350:CDS
TTCATTAAATCCTTTGCCAA+AGG 0.487276 8_4:+14698518 None:intergenic
ACCAATGTGCTTTCACAACT+GGG 0.489522 8_4:-14699111 Msa1315350:CDS
ACCACAGAACTGATTTGCAT+TGG 0.490668 8_4:+14700060 None:intergenic
AAAGCCAAGACGGTTCAATC+AGG 0.493324 8_4:-14698674 Msa1315350:CDS
AGGAAGATCGGCACAATATG+TGG 0.493549 8_4:-14701867 Msa1315350:CDS
AATTAAATTATATACATGAA+TGG 0.495549 8_4:+14692661 None:intergenic
TCATTAAATCCTTTGCCAAA+GGG 0.496371 8_4:+14698519 None:intergenic
AGTCTTGTGGCTTCAAACAT+TGG 0.496716 8_4:+14699534 None:intergenic
CTTAACAGCATTGGCGAACT+CGG 0.498542 8_4:+14699303 None:intergenic
CGGATAAGTTGATATAGGTC+AGG 0.499063 8_4:+14692905 None:intergenic
TTTGAAAATTGGGTTACTCA+TGG 0.502111 8_4:-14692964 Msa1315350:CDS
TATATACTGACCTTTAAGAT+AGG 0.502188 8_4:+14694708 None:intergenic
AGGCAAGTTTATGCAGGAAT+GGG 0.504128 8_4:-14696509 Msa1315350:CDS
GAAACGAGGAGTCAATGAAA+GGG 0.506357 8_4:-14700145 Msa1315350:CDS
TATATCGTACATATAATGTC+AGG 0.506653 8_4:+14699976 None:intergenic
CACATTAGCCTTTCAATATG+GGG 0.510110 8_4:-14698474 Msa1315350:CDS
GAATATGGGAATAATCCCTC+TGG 0.512618 8_4:+14699021 None:intergenic
GGAGATTGAAGAAGAGAAGG+TGG 0.516279 8_4:-14703954 Msa1315350:CDS
GCTTATGGACTCGTCGCACT+AGG 0.517099 8_4:-14698596 Msa1315350:CDS
CTGCTCCAATTTCCTTGATG+TGG 0.517591 8_4:-14696426 Msa1315350:CDS
TAGGGTTCGAATAAGCTCTT+GGG 0.519595 8_4:+14697693 None:intergenic
GAGATTGAAGAAGAGAAGGT+GGG 0.520849 8_4:-14703953 Msa1315350:CDS
CCACAAGTAGACTTCAATAG+AGG 0.523606 8_4:+14696676 None:intergenic
TAATAAAACTTTGAGTAAGG+AGG 0.524239 8_4:-14699275 Msa1315350:CDS
TAAACCCAAATGCATGTAGC+TGG 0.525363 8_4:+14698570 None:intergenic
GGGTTGCCAAGTTTAATATG+TGG 0.528032 8_4:+14698539 None:intergenic
TACAACAATACATATACGGA+CGG 0.528782 8_4:-14697661 Msa1315350:CDS
ATTACAAAGCGGAGGAAGAT+CGG 0.531117 8_4:-14701879 Msa1315350:CDS
ACTTGGCAACCCTTTGGCAA+AGG 0.532622 8_4:-14698528 Msa1315350:CDS
CAGTTGTGAAAGCACATTGG+TGG 0.534453 8_4:+14699113 None:intergenic
TTCATTCACAATATTGTCTG+AGG 0.534573 8_4:+14694764 None:intergenic
TTATACAGGCAAGTTTATGC+AGG 0.534777 8_4:-14696515 Msa1315350:intron
TCCTTCGGATAAGTTGATAT+AGG 0.535865 8_4:+14692900 None:intergenic
TGAAATGCTGAAGCGTCTAC+AGG 0.535888 8_4:-14702133 Msa1315350:CDS
CGACCGCCAGACCCAAACTA+AGG 0.536113 8_4:+14692594 None:intergenic
GCGTCTACAGGATGGAAACT+TGG 0.538498 8_4:-14702121 Msa1315350:CDS
GTGAAGAAGAACTACTTGAC+AGG 0.539008 8_4:-14696376 Msa1315350:intron
TGAACTAATAACTGAGGTGC+CGG 0.541042 8_4:-14694745 Msa1315350:CDS
CATGGTCCAAATTTAGCAGA+TGG 0.542233 8_4:-14697385 Msa1315350:CDS
GGTTGCCAAGTTTAATATGT+GGG 0.543042 8_4:+14698540 None:intergenic
AGTGCTGCTGGTGTTGAAGT+TGG 0.547360 8_4:-14703926 Msa1315350:CDS
ATAGACTAAGGCAACAGTCC+AGG 0.549517 8_4:+14700869 None:intergenic
GATGGAGATTGAAGAAGAGA+AGG 0.551345 8_4:-14703957 Msa1315350:CDS
GTCTTTGCAGATGCTAGTGA+TGG 0.554035 8_4:-14700087 Msa1315350:CDS
TTGACTTGATTACCATTGCT+AGG 0.555440 8_4:-14700495 Msa1315350:CDS
TGAAACGAGGAGTCAATGAA+AGG 0.555782 8_4:-14700146 Msa1315350:CDS
ATGAAAGTTTATGAGTCCAT+GGG 0.555783 8_4:-14698500 Msa1315350:CDS
AGGGATCTGAATTGTGATGA+TGG 0.556554 8_4:-14703975 Msa1315350:exon
GCTTTCACAACTGGGAAAAG+TGG 0.557872 8_4:-14699103 Msa1315350:CDS
AGATTGAAGAAGAGAAGGTG+GGG 0.558991 8_4:-14703952 Msa1315350:CDS
CTTAGTTTGGGTCTGGCGGT+CGG 0.559001 8_4:-14692593 Msa1315350:three_prime_UTR
GATGAATTTCTTGTTGAGCA+AGG 0.559740 8_4:-14698785 Msa1315350:CDS
ATTCTCAAAATGAAGTCTTG+TGG 0.560519 8_4:+14699521 None:intergenic
TTTGATCGCACACTTGAATG+TGG 0.561611 8_4:+14701801 None:intergenic
ACTTGCGGCCAGATATAGAA+AGG 0.562076 8_4:+14700518 None:intergenic
ATTGTTGTAATAACGCTGTA+GGG 0.562688 8_4:+14697675 None:intergenic
GAACTTCTATCTGTCAATGC+AGG 0.564220 8_4:-14696654 Msa1315350:intron
CTTGATACTGTACCTAATTG+GGG 0.567672 8_4:+14692696 None:intergenic
AAAGGCTAATGTGTCGCCCA+TGG 0.569063 8_4:+14698484 None:intergenic
AAGGTGGGGACAAGTGCTGC+TGG 0.571459 8_4:-14703938 Msa1315350:CDS
ACCTATATCAACTTATCCGA+AGG 0.575997 8_4:-14692901 Msa1315350:three_prime_UTR
GTGCCGTGAGCGCCTAGCAA+TGG 0.576081 8_4:+14700483 None:intergenic
AGGTTTCATATTCAATGGAG+AGG 0.578082 8_4:+14699996 None:intergenic
ATAAGCATACTGTGCAACAT+TGG 0.579135 8_4:+14698613 None:intergenic
ACAACAATACATATACGGAC+GGG 0.579913 8_4:-14697660 Msa1315350:CDS
AAGAAAGCCAGTCCACATCA+AGG 0.580107 8_4:+14696414 None:intergenic
ACAACTTGCTATGGAATCAT+CGG 0.580415 8_4:-14702075 Msa1315350:intron
AAACCTTAGTTTGGGTCTGG+CGG 0.582020 8_4:-14692597 Msa1315350:three_prime_UTR
CGGTTCAATCAGGCGTCTTG+AGG 0.583992 8_4:-14698664 Msa1315350:CDS
TTATCTGGTCATAATGTCAC+GGG 0.584534 8_4:-14700969 Msa1315350:CDS
TTCACCGAGAATATTGCCAT+CGG 0.585090 8_4:+14696780 None:intergenic
ATTAACAACTTTCAGCAGCA+AGG 0.585777 8_4:-14699136 Msa1315350:CDS
CACAGAACTGATTTGCATTG+GGG 0.592102 8_4:+14700062 None:intergenic
TGGAACGAGTTCTTAACTCG+TGG 0.592450 8_4:-14700918 Msa1315350:CDS
ATGCTGAAGCGTCTACAGGA+TGG 0.593299 8_4:-14702129 Msa1315350:CDS
TTCAGTGCGTATGCACAATG+TGG 0.593906 8_4:-14701494 Msa1315350:intron
GATGCACATAAGATGAGGAC+TGG 0.595284 8_4:+14692570 None:intergenic
AAGATGAGAGGGTTGACTTG+AGG 0.597280 8_4:+14701467 None:intergenic
CTTATCTGGTCATAATGTCA+CGG 0.598724 8_4:-14700970 Msa1315350:CDS
CAGGATGGAAACTTGGCCAC+AGG 0.599825 8_4:-14702114 Msa1315350:CDS
GAGTACCACAGAAAGATGAG+AGG 0.604000 8_4:+14701455 None:intergenic
GATACAAAAGCAAATAGCAG+TGG 0.605071 8_4:-14692833 Msa1315350:three_prime_UTR
ATGTTCGCGTTGAATCTGAC+TGG 0.605772 8_4:-14699078 Msa1315350:CDS
GATGGAAACTTGGCCACAGG+AGG 0.606318 8_4:-14702111 Msa1315350:CDS
GTTGCCAAGTTTAATATGTG+GGG 0.606826 8_4:+14698541 None:intergenic
AACAAATTTAAGCCCTCCTG+TGG 0.608055 8_4:+14702098 None:intergenic
ATTTAGCAGATGGAATTGAT+GGG 0.608558 8_4:-14697375 Msa1315350:intron
CCTCTATTGAAGTCTACTTG+TGG 0.609343 8_4:-14696676 Msa1315350:CDS
TAGAGGTCAATGGAAGGCAG+CGG 0.610698 8_4:-14697722 Msa1315350:CDS
AATGGTTATTACAGTTGTGA+TGG 0.613237 8_4:-14698719 Msa1315350:CDS
CCCAATGCAAATCAGTTCTG+TGG 0.613475 8_4:-14700061 Msa1315350:CDS
AAGCAAATAGCAGTGGCAGA+AGG 0.616665 8_4:-14692826 Msa1315350:three_prime_UTR
ACATTAGCCTTTCAATATGG+GGG 0.616794 8_4:-14698473 Msa1315350:CDS
AGTACCACAGAAAGATGAGA+GGG 0.619650 8_4:+14701456 None:intergenic
AAAAGAGAGGGATTGAACCC+CGG 0.619852 8_4:+14700031 None:intergenic
AAGGAAACAGAAAATGGCAA+TGG 0.620301 8_4:-14698737 Msa1315350:CDS
TCCCAGTTGTGAAAGCACAT+TGG 0.620901 8_4:+14699110 None:intergenic
AGTTTATGCAGGAATGGGCA+AGG 0.620967 8_4:-14696504 Msa1315350:CDS
AGTTCTGTGGTGCAGATCCG+GGG 0.622116 8_4:-14700048 Msa1315350:CDS
GTGAAAGTGACTCTACAACT+AGG 0.625184 8_4:-14696762 Msa1315350:CDS
CTTCCTGAGACCAAAAGAGA+GGG 0.626552 8_4:+14700019 None:intergenic
TAGAAGTAGAGGTCAATGGA+AGG 0.628077 8_4:-14697728 Msa1315350:CDS
TCAGTGCGTATGCACAATGT+GGG 0.628859 8_4:-14701493 Msa1315350:intron
GCTTCCTGAGACCAAAAGAG+AGG 0.637321 8_4:+14700018 None:intergenic
ACACCAAACATGAGTCCAGA+GGG 0.639541 8_4:-14699036 Msa1315350:CDS
TGGTGCAGGTATTTGAAACG+AGG 0.645473 8_4:-14700159 Msa1315350:intron
ATTAGAAGATCACAATCCGA+TGG 0.647469 8_4:-14696796 Msa1315350:CDS
GGGTTCTGCAGCGCACAACA+AGG 0.652377 8_4:-14698453 Msa1315350:intron
ATGCAGTATGGATCTTACAA+AGG 0.656804 8_4:-14701042 Msa1315350:CDS
TCAACCCTCTCATCTTTCTG+TGG 0.657917 8_4:-14701460 Msa1315350:CDS
ATGGAAACTTGGCCACAGGA+GGG 0.658115 8_4:-14702110 Msa1315350:CDS
GGGCATTTCCAGCCACAACA+GGG 0.658755 8_4:-14697460 Msa1315350:CDS
TTGATACTGTACCTAATTGG+GGG 0.661403 8_4:+14692697 None:intergenic
TGGTAATCAAGTCAAACTTG+CGG 0.663201 8_4:+14700503 None:intergenic
TGATACTGTACCTAATTGGG+GGG 0.669505 8_4:+14692698 None:intergenic
TAATTGATGCACATAAGATG+AGG 0.671637 8_4:+14692565 None:intergenic
AACAGGGAAAACCAGTACTG+TGG 0.673122 8_4:-14697444 Msa1315350:CDS
AAACGAGGAGTCAATGAAAG+GGG 0.678363 8_4:-14700144 Msa1315350:CDS
TGAGTAAGGAGGATTGTCTG+AGG 0.680809 8_4:-14699264 Msa1315350:intron
GATACTGTACCTAATTGGGG+GGG 0.687239 8_4:+14692699 None:intergenic
TGCTGCTTATTACAAAGCGG+AGG 0.690628 8_4:-14701887 Msa1315350:CDS
TTACAGTGTCAAAGCCAAGA+CGG 0.700662 8_4:-14698684 Msa1315350:CDS
GACACCAAACATGAGTCCAG+AGG 0.705411 8_4:-14699037 Msa1315350:CDS
CATACTGTGCAACATTGGTG+CGG 0.714917 8_4:+14698618 None:intergenic
GTTCGCAGAATAGTTTCACG+CGG 0.715239 8_4:+14699325 None:intergenic
ACATGCTGCTTATTACAAAG+CGG 0.716900 8_4:-14701890 Msa1315350:CDS
TGTGAATGAACTAATAACTG+AGG 0.731433 8_4:-14694751 Msa1315350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACATTTTTTTTTATG+TGG - chr8_4:14692543-14692562 Msa1315350:three_prime_UTR 10.0%
!!! TTTTTTATGTTAACTTAAAT+AGG - chr8_4:14694533-14694552 Msa1315350:intron 10.0%
!! AAAAAAAAAATTAGAAGAAT+CGG + chr8_4:14696134-14696153 None:intergenic 10.0%
!! AAAAGATAAAAGAATATAAA+AGG + chr8_4:14697586-14697605 None:intergenic 10.0%
!!! TGTTTTGATTATAAATAAAA+AGG - chr8_4:14703055-14703074 Msa1315350:intron 10.0%
!!! GTTTTGATTATAAATAAAAA+GGG - chr8_4:14703056-14703075 Msa1315350:intron 10.0%
!!! GTTTTTTTTTTTTTTTTTGA+AGG - chr8_4:14703662-14703681 Msa1315350:intron 10.0%
!! AATTAAATTATATACATGAA+TGG + chr8_4:14704297-14704316 None:intergenic 10.0%
!!! ATTATTTAATCTTTTTTTGT+TGG - chr8_4:14704409-14704428 Msa1315350:five_prime_UTR 10.0%
!! AAAAAAAAAAACATTATGTG+TGG - chr8_4:14692785-14692804 Msa1315350:three_prime_UTR 15.0%
!!! TTTTTATTGTACTTGTTTTT+GGG - chr8_4:14692831-14692850 Msa1315350:three_prime_UTR 15.0%
!!! TTGTTTTTGTGTTTTATTTT+TGG - chr8_4:14693265-14693284 Msa1315350:intron 15.0%
!! TTTGTTTAATTATTCATTCA+TGG - chr8_4:14693312-14693331 Msa1315350:intron 15.0%
!! ATCTTTATAAATGAGAAATA+TGG - chr8_4:14694093-14694112 Msa1315350:intron 15.0%
!!! ATTGTTATTGTTATGAATTA+CGG - chr8_4:14695304-14695323 Msa1315350:intron 15.0%
!!! TTCGTTTTTTAATATACATT+TGG - chr8_4:14695758-14695777 Msa1315350:intron 15.0%
!! TTAATATAAAAATACCAGTA+AGG + chr8_4:14696691-14696710 None:intergenic 15.0%
!! TATTAATAAAACTTTGAGTA+AGG - chr8_4:14697677-14697696 Msa1315350:CDS 15.0%
!!! TGATTTTTATTTTTTTGGAA+TGG - chr8_4:14698548-14698567 Msa1315350:CDS 15.0%
!!! TTATTTTAACGATCTATTTT+AGG - chr8_4:14698675-14698694 Msa1315350:CDS 15.0%
!!! TGCTTATTTTCAATTATTTA+TGG - chr8_4:14698728-14698747 Msa1315350:CDS 15.0%
!! AAATTGATATCGATAAATAA+AGG + chr8_4:14698957-14698976 None:intergenic 15.0%
!! TTATTACAACAATACATATA+CGG - chr8_4:14699290-14699309 Msa1315350:CDS 15.0%
!! TGTAATATTAATTACACAAA+AGG + chr8_4:14699359-14699378 None:intergenic 15.0%
!!! TTTCTTTTAAGAAATTGTTT+TGG - chr8_4:14699639-14699658 Msa1315350:intron 15.0%
!!! AAAAATGTTATTTCTTTGTT+TGG - chr8_4:14700126-14700145 Msa1315350:CDS 15.0%
!! TTAAATGTAAAATACCAAAA+TGG - chr8_4:14700708-14700727 Msa1315350:intron 15.0%
!!! ATTTGACTTTATTTTATCAT+TGG - chr8_4:14701529-14701548 Msa1315350:intron 15.0%
!!! TTTATCATTTGTTATAGAAA+TGG - chr8_4:14701748-14701767 Msa1315350:intron 15.0%
!! TTACAAAAAAATTGTCAAAA+TGG + chr8_4:14701852-14701871 None:intergenic 15.0%
!! TTTGATCCAATATAATTATT+TGG - chr8_4:14701990-14702009 Msa1315350:intron 15.0%
!! ATATTAATGAGTTATAGTTA+AGG - chr8_4:14702323-14702342 Msa1315350:intron 15.0%
!! TAGTAAATAATTTCCTAATT+AGG - chr8_4:14703182-14703201 Msa1315350:intron 15.0%
!!! ATTTTTTTTCTTTTTCTTTC+TGG - chr8_4:14703353-14703372 Msa1315350:intron 15.0%
!!! TTTTTTTTTTTTTTTGAAGG+AGG - chr8_4:14703665-14703684 Msa1315350:intron 15.0%
!!! TACATATTCATATTTTCATT+TGG - chr8_4:14704188-14704207 Msa1315350:five_prime_UTR 15.0%
!!! ACATATTCATATTTTCATTT+GGG - chr8_4:14704189-14704208 Msa1315350:five_prime_UTR 15.0%
!!! GAAAAAAAGTAGCTTTTTTA+AGG + chr8_4:14692704-14692723 None:intergenic 20.0%
!!! CTTTTTATTGTACTTGTTTT+TGG - chr8_4:14692830-14692849 Msa1315350:three_prime_UTR 20.0%
!!! TTGTTGTTAATTTTTTCTGT+TGG - chr8_4:14692909-14692928 Msa1315350:three_prime_UTR 20.0%
!!! ACATGAATTGTTTTTTAATG+AGG - chr8_4:14693415-14693434 Msa1315350:intron 20.0%
!!! GTTTTTGAATTCTGTTTAAT+TGG - chr8_4:14693481-14693500 Msa1315350:intron 20.0%
!!! TCAAATTATTTTGCAGAAAA+TGG - chr8_4:14693631-14693650 Msa1315350:intron 20.0%
!!! AACGTTTTTTTTTTCCTAAA+AGG - chr8_4:14694157-14694176 Msa1315350:intron 20.0%
!! CTTATCATTATATTATCTGT+GGG + chr8_4:14694364-14694383 None:intergenic 20.0%
!!! AAAGTTTTACTATGATATAG+AGG + chr8_4:14694916-14694935 None:intergenic 20.0%
!!! TATGGTATCTCTTTTTATTT+AGG - chr8_4:14695016-14695035 Msa1315350:intron 20.0%
!!! ATGGTATCTCTTTTTATTTA+GGG - chr8_4:14695017-14695036 Msa1315350:intron 20.0%
!! ACAATAACAATTAAGTACAA+TGG + chr8_4:14695295-14695314 None:intergenic 20.0%
!!! TTATGAATTACGGTTTTTAT+CGG - chr8_4:14695314-14695333 Msa1315350:intron 20.0%
!! TACAAAGAAAAACTAAAATG+TGG + chr8_4:14695407-14695426 None:intergenic 20.0%
!!! TTTATCGTAAGTTCATTTTA+CGG - chr8_4:14695637-14695656 Msa1315350:intron 20.0%
!! TTTAAAAAATCCATAGACTA+AGG + chr8_4:14696101-14696120 None:intergenic 20.0%
!!! TATATTTCTACACATATTCA+AGG - chr8_4:14696760-14696779 Msa1315350:CDS 20.0%
!! TTATATAAACAGCTTATCTT+AGG + chr8_4:14697066-14697085 None:intergenic 20.0%
!! AAGATAAAATAAAGTCAAAC+TGG - chr8_4:14697089-14697108 Msa1315350:intron 20.0%
!! CAGTCTAAATAACATAATAT+GGG + chr8_4:14697359-14697378 None:intergenic 20.0%
!! TCAGTCTAAATAACATAATA+TGG + chr8_4:14697360-14697379 None:intergenic 20.0%
!! TCAAGTTCAGTATAATAATT+GGG + chr8_4:14697480-14697499 None:intergenic 20.0%
!! ATCAAGTTCAGTATAATAAT+TGG + chr8_4:14697481-14697500 None:intergenic 20.0%
!! TATTATACTGAACTTGATTA+AGG - chr8_4:14697483-14697502 Msa1315350:intron 20.0%
!! AAAACTTATCAGAAAATGTT+AGG + chr8_4:14698105-14698124 None:intergenic 20.0%
!!! AAAAAAGTATAATGCTGATA+AGG - chr8_4:14698199-14698218 Msa1315350:intron 20.0%
!!! GGGTTTGATTTTTATTTTTT+TGG - chr8_4:14698543-14698562 Msa1315350:CDS 20.0%
!! GTTTCTATAATATATTCAAC+AGG - chr8_4:14699079-14699098 Msa1315350:CDS 20.0%
!!! TTACATTTTCTCATTTTACT+TGG - chr8_4:14699149-14699168 Msa1315350:intron 20.0%
!! AAAATAATATCAAACAAGAG+AGG + chr8_4:14699462-14699481 None:intergenic 20.0%
!!! TATTATTTTGTTCAGATTCT+TGG - chr8_4:14699473-14699492 Msa1315350:CDS 20.0%
!!! ATTATTTTGTTCAGATTCTT+GGG - chr8_4:14699474-14699493 Msa1315350:CDS 20.0%
!!! TTTTAAGAAATTGTTTTGGA+GGG - chr8_4:14699643-14699662 Msa1315350:intron 20.0%
!! CTTGAAAATAAAATATTCAC+AGG + chr8_4:14699701-14699720 None:intergenic 20.0%
!! AAATAATTACATTAGTTGTG+CGG - chr8_4:14700906-14700925 Msa1315350:CDS 20.0%
!!! TTGTTTCACCTAATATTTTT+CGG - chr8_4:14700998-14701017 Msa1315350:CDS 20.0%
!!! AATAGCTTGAATTTTGTATT+TGG - chr8_4:14701207-14701226 Msa1315350:intron 20.0%
!! AGCTTATAACTTATATGAAA+TGG - chr8_4:14701700-14701719 Msa1315350:intron 20.0%
!!! AAAAATTGTCAAAATGGATT+AGG + chr8_4:14701846-14701865 None:intergenic 20.0%
!! CCTTAACCAAATAATTATAT+TGG + chr8_4:14701999-14702018 None:intergenic 20.0%
!! CCAATATAATTATTTGGTTA+AGG - chr8_4:14701996-14702015 Msa1315350:intron 20.0%
!! TTAATATTTCCTAACTGAAA+AGG + chr8_4:14702310-14702329 None:intergenic 20.0%
!!! ACTTTATAAATTCATTTTCG+GGG + chr8_4:14702771-14702790 None:intergenic 20.0%
!!! CACTTTATAAATTCATTTTC+GGG + chr8_4:14702772-14702791 None:intergenic 20.0%
!!! CCACTTTATAAATTCATTTT+CGG + chr8_4:14702773-14702792 None:intergenic 20.0%
!! CGAAAATGAATTTATAAAGT+GGG - chr8_4:14702771-14702790 Msa1315350:intron 20.0%
!! TTAAGAACCTTAAAATTGTT+TGG - chr8_4:14703008-14703027 Msa1315350:intron 20.0%
!! TAAGAACCTTAAAATTGTTT+GGG - chr8_4:14703009-14703028 Msa1315350:intron 20.0%
!! TAAATAAAAAGGGAAATGTT+CGG - chr8_4:14703066-14703085 Msa1315350:intron 20.0%
!! AGTTAATAATCTTAGAACTT+TGG - chr8_4:14703115-14703134 Msa1315350:intron 20.0%
!!! ACAAGTTGATATTTTTCTTA+GGG + chr8_4:14703247-14703266 None:intergenic 20.0%
!!! TACAAGTTGATATTTTTCTT+AGG + chr8_4:14703248-14703267 None:intergenic 20.0%
! TTTAGGAAATGGAAAAAAAC+AGG + chr8_4:14692660-14692679 None:intergenic 25.0%
!!! TTTTTTAAGGAATCAGAAGA+AGG + chr8_4:14692691-14692710 None:intergenic 25.0%
! GAAAGATTATAATCCATTTG+TGG - chr8_4:14693559-14693578 Msa1315350:intron 25.0%
!! AAAGTAATAGCTATCCTTTT+AGG + chr8_4:14694174-14694193 None:intergenic 25.0%
! GCTTATCATTATATTATCTG+TGG + chr8_4:14694365-14694384 None:intergenic 25.0%
!! ATAATGATAAGCTGTTGATT+TGG - chr8_4:14694373-14694392 Msa1315350:intron 25.0%
!! TTTGGAAAGACATTTAAGTT+TGG - chr8_4:14694391-14694410 Msa1315350:intron 25.0%
!!! AAATTTGTTACAACTTGCTA+TGG - chr8_4:14694871-14694890 Msa1315350:intron 25.0%
! TTTACTATGATATAGAGGAT+AGG + chr8_4:14694911-14694930 None:intergenic 25.0%
! ATAATAACTCAACTGTCTTA+TGG - chr8_4:14694998-14695017 Msa1315350:intron 25.0%
!! ATCAAATTTGGCATTTTCTA+AGG - chr8_4:14695171-14695190 Msa1315350:intron 25.0%
! ATGAACTTATGAAAACAACA+AGG + chr8_4:14695617-14695636 None:intergenic 25.0%
! GTAACTATTTGAGTAAAACA+AGG - chr8_4:14695701-14695720 Msa1315350:intron 25.0%
! ATACATTTGGTTAGAGTTAT+TGG - chr8_4:14695771-14695790 Msa1315350:intron 25.0%
! AGATGGTCTATATTAAATGA+AGG + chr8_4:14695839-14695858 None:intergenic 25.0%
! TATATGAAACACTGTTTGTT+TGG - chr8_4:14696017-14696036 Msa1315350:intron 25.0%
!!! AGTCTATGGATTTTTTAAAC+AGG - chr8_4:14696102-14696121 Msa1315350:intron 25.0%
! TTGTGTGAAGTTAATTAGTA+CGG - chr8_4:14696153-14696172 Msa1315350:intron 25.0%
! TCTAATAAACACATATCACT+AGG + chr8_4:14696358-14696377 None:intergenic 25.0%
!! TAAAAAGAAAAGTACAAACC+TGG + chr8_4:14696508-14696527 None:intergenic 25.0%
! GTGATATATGAAATTAATCC+AGG + chr8_4:14696601-14696620 None:intergenic 25.0%
! ATAAAAATACCAGTAAGGAA+TGG + chr8_4:14696686-14696705 None:intergenic 25.0%
!!! ATACATAAGAGAAGGTATTA+TGG + chr8_4:14696721-14696740 None:intergenic 25.0%
!!! TTCAAGGTTTCTTTATTTTG+TGG - chr8_4:14696776-14696795 Msa1315350:CDS 25.0%
! TATATCGTACATATAATGTC+AGG + chr8_4:14696982-14697001 None:intergenic 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr8_4:14697165-14697184 Msa1315350:intron 25.0%
! AATAAGCTGCAAAAAACTTA+TGG - chr8_4:14697235-14697254 Msa1315350:intron 25.0%
! CTTCTTAAATACTAGAGAAA+AGG + chr8_4:14697398-14697417 None:intergenic 25.0%
!! CTTTTCTCTAGTATTTAAGA+AGG - chr8_4:14697396-14697415 Msa1315350:CDS 25.0%
! ATTAATAGACTTAACAGCAT+TGG + chr8_4:14697664-14697683 None:intergenic 25.0%
! TAATAAAACTTTGAGTAAGG+AGG - chr8_4:14697680-14697699 Msa1315350:CDS 25.0%
!!! GGTAAATTTCTCTTCTTTTT+TGG - chr8_4:14697748-14697767 Msa1315350:intron 25.0%
! AATAATGTCAAAATAACACC+CGG + chr8_4:14697797-14697816 None:intergenic 25.0%
!!! AAGTTGATTTGGTATTTGAA+AGG - chr8_4:14698703-14698722 Msa1315350:CDS 25.0%
!!! AGTTGATTTGGTATTTGAAA+GGG - chr8_4:14698704-14698723 Msa1315350:CDS 25.0%
! ATCTACATGTAACAAAACAA+AGG + chr8_4:14698837-14698856 None:intergenic 25.0%
! AAATTCAGGGAAAATTATGA+TGG + chr8_4:14699117-14699136 None:intergenic 25.0%
! AATTTCCACTTCAAAATTCA+GGG + chr8_4:14699130-14699149 None:intergenic 25.0%
! AAATTTCCACTTCAAAATTC+AGG + chr8_4:14699131-14699150 None:intergenic 25.0%
!! TCATTACAGTTCATTCTTTT+GGG - chr8_4:14699182-14699201 Msa1315350:intron 25.0%
!!! TTATTTTGTTCAGATTCTTG+GGG - chr8_4:14699475-14699494 Msa1315350:CDS 25.0%
!!! CTTTTAAGAAATTGTTTTGG+AGG - chr8_4:14699642-14699661 Msa1315350:intron 25.0%
!! TAATTTAAGATCTTCAGATG+TGG + chr8_4:14699899-14699918 None:intergenic 25.0%
!!! AAAAAGTACTCAGAATTTTG+AGG + chr8_4:14699950-14699969 None:intergenic 25.0%
!!! TTCTGAGTACTTTTTTTAGA+TGG - chr8_4:14699955-14699974 Msa1315350:intron 25.0%
!! TTTTCTTTCGTCATCAAAAA+AGG + chr8_4:14700070-14700089 None:intergenic 25.0%
!!! ATGTTATTTCTTTGTTTGGT+AGG - chr8_4:14700130-14700149 Msa1315350:CDS 25.0%
! AAATACCAAAATGGAATACT+TGG - chr8_4:14700717-14700736 Msa1315350:intron 25.0%
! GATAGTTTATGAAAATAAGC+TGG + chr8_4:14701467-14701486 None:intergenic 25.0%
! AATAAGCTGAAAACATCTTA+TGG + chr8_4:14701648-14701667 None:intergenic 25.0%
! ATTGTGATCTTGCATTTAAA+TGG - chr8_4:14702026-14702045 Msa1315350:intron 25.0%
! GTTGCTTAATGTTAATACTA+TGG - chr8_4:14702067-14702086 Msa1315350:intron 25.0%
!!! TATATACTGACCTTTAAGAT+AGG + chr8_4:14702250-14702269 None:intergenic 25.0%
!!! TGTTAGTTCTAGAATCATTA+CGG - chr8_4:14702271-14702290 Msa1315350:intron 25.0%
! AGAGACAAATGTTTCTTAAA+TGG + chr8_4:14702581-14702600 None:intergenic 25.0%
! ATTCTTTGTAAACTTGAAGT+TGG - chr8_4:14702640-14702659 Msa1315350:intron 25.0%
! CCGAAAATGAATTTATAAAG+TGG - chr8_4:14702770-14702789 Msa1315350:intron 25.0%
! CTAACTCAAACTTACAAATT+CGG + chr8_4:14702818-14702837 None:intergenic 25.0%
!! ATTTAGAGTCTAAGATTCAT+TGG - chr8_4:14702868-14702887 Msa1315350:intron 25.0%
!! TTTAGAGTCTAAGATTCATT+GGG - chr8_4:14702869-14702888 Msa1315350:intron 25.0%
!!! TTTTCCGGTTTTGTAATATT+AGG - chr8_4:14702948-14702967 Msa1315350:intron 25.0%
! CTAACCTAATATTACAAAAC+CGG + chr8_4:14702955-14702974 None:intergenic 25.0%
!!! CTAAACCTAGTCTTAAAATT+TGG + chr8_4:14702985-14703004 None:intergenic 25.0%
!! TTTGAACCCAAACAATTTTA+AGG + chr8_4:14703018-14703037 None:intergenic 25.0%
! AAATAAAAAGGGAAATGTTC+GGG - chr8_4:14703067-14703086 Msa1315350:intron 25.0%
! TATCAGTTACAATAAGTTTG+CGG + chr8_4:14703504-14703523 None:intergenic 25.0%
! GAGTTTATGAAAACAACTTA+TGG - chr8_4:14703628-14703647 Msa1315350:intron 25.0%
!! TCATTCAAACATTCTTTTCT+AGG - chr8_4:14703872-14703891 Msa1315350:CDS 25.0%
!! TTTTGCTTTCAATGTATTTC+AGG - chr8_4:14703918-14703937 Msa1315350:CDS 25.0%
! GAAGAAGAACTTAACAAAAA+TGG - chr8_4:14703952-14703971 Msa1315350:CDS 25.0%
!!! ATACTGAAAGCTTTGAAAAT+TGG - chr8_4:14703980-14703999 Msa1315350:exon 25.0%
!!! TACTGAAAGCTTTGAAAATT+GGG - chr8_4:14703981-14704000 Msa1315350:exon 25.0%
!!! AAGCTGATTTTTGTTCAAAA+GGG - chr8_4:14704156-14704175 Msa1315350:five_prime_UTR 25.0%
!! TATTCATATTTTCATTTGGG+AGG - chr8_4:14704192-14704211 Msa1315350:five_prime_UTR 25.0%
!! ATAGCTTTTAAACCTTAGTT+TGG - chr8_4:14704349-14704368 Msa1315350:five_prime_UTR 25.0%
!! TAGCTTTTAAACCTTAGTTT+GGG - chr8_4:14704350-14704369 Msa1315350:five_prime_UTR 25.0%
!!! AGGTGTTTAGTTTTAGGAAA+TGG + chr8_4:14692671-14692690 None:intergenic 30.0%
!!! AGAAGAAGGTGTTTAGTTTT+AGG + chr8_4:14692677-14692696 None:intergenic 30.0%
AGCTCAAAACTTTACATCAA+TGG + chr8_4:14692812-14692831 None:intergenic 30.0%
AGATTGTTTCAATTGAGCAA+AGG - chr8_4:14693347-14693366 Msa1315350:intron 30.0%
! ATTTTGCAGAAAATGGCTTA+TGG - chr8_4:14693638-14693657 Msa1315350:intron 30.0%
ATCTGAAAACAATGGAGAAT+AGG + chr8_4:14693667-14693686 None:intergenic 30.0%
TTAGTCGGCAAAAAGTAATA+GGG + chr8_4:14693967-14693986 None:intergenic 30.0%
ATTAGTCGGCAAAAAGTAAT+AGG + chr8_4:14693968-14693987 None:intergenic 30.0%
AAAAAAGCAGACAGATTAGT+CGG + chr8_4:14693982-14694001 None:intergenic 30.0%
TCAGTATTCAGTAATATCAC+AGG + chr8_4:14694038-14694057 None:intergenic 30.0%
!! TACTGATGAAGTGTTTTTAC+AGG - chr8_4:14694052-14694071 Msa1315350:intron 30.0%
! TTGTCTTATTCTCCTCAATT+TGG - chr8_4:14694196-14694215 Msa1315350:intron 30.0%
TATATTATCTGTGGGAGAAA+AGG + chr8_4:14694356-14694375 None:intergenic 30.0%
TTACGATGCTTTCTAATTAC+CGG - chr8_4:14694492-14694511 Msa1315350:intron 30.0%
!! AATATACGAAAGAGCACTAT+TGG - chr8_4:14694644-14694663 Msa1315350:intron 30.0%
AATCTCTGAGCATAGAAAAA+TGG + chr8_4:14694682-14694701 None:intergenic 30.0%
! GAGACAAAAACAGAACATTT+TGG - chr8_4:14694716-14694735 Msa1315350:intron 30.0%
! CAAAAACAGAACATTTTGGA+AGG - chr8_4:14694720-14694739 Msa1315350:CDS 30.0%
ACAATTAAGTACAATGGACA+GGG + chr8_4:14695289-14695308 None:intergenic 30.0%
AACAATTAAGTACAATGGAC+AGG + chr8_4:14695290-14695309 None:intergenic 30.0%
AACTTATGAAAACAACAAGG+AGG + chr8_4:14695614-14695633 None:intergenic 30.0%
! AGTAAAACAAGGTATTTCCA+GGG - chr8_4:14695712-14695731 Msa1315350:intron 30.0%
AATATAGACCATCTCACTAA+TGG - chr8_4:14695845-14695864 Msa1315350:intron 30.0%
AAAAAAGTCCATTAGTGAGA+TGG + chr8_4:14695856-14695875 None:intergenic 30.0%
AGTCTTCAAAAGAACTTATC+TGG - chr8_4:14695971-14695990 Msa1315350:intron 30.0%
!!! TTTTTTGTGGTTCAACTTCA+AGG + chr8_4:14696241-14696260 None:intergenic 30.0%
TGAAGTTGAACCACAAAAAA+AGG - chr8_4:14696241-14696260 Msa1315350:intron 30.0%
!!! GTATGTCAAACCTTTTTTTG+TGG + chr8_4:14696254-14696273 None:intergenic 30.0%
! TTTCATGTTTTGCGTATTTC+TGG - chr8_4:14696298-14696317 Msa1315350:intron 30.0%
! CTTGACAAGTTTTCATTACA+TGG - chr8_4:14696397-14696416 Msa1315350:CDS 30.0%
TAGGTTAACCTTTCTATATC+TGG - chr8_4:14696429-14696448 Msa1315350:CDS 30.0%
AACATAAACCGGTATAGTAT+AGG + chr8_4:14696631-14696650 None:intergenic 30.0%
CTCGTGAAATTAACATAAAC+CGG + chr8_4:14696642-14696661 None:intergenic 30.0%
ATGTCAGGTTTCATATTCAA+TGG + chr8_4:14696967-14696986 None:intergenic 30.0%
! TTTGTTTCTCACTTACGTTT+GGG - chr8_4:14697025-14697044 Msa1315350:intron 30.0%
GCTTATTTCAACTTATCTAC+TGG + chr8_4:14697316-14697335 None:intergenic 30.0%
ATTCTCAAAATGAAGTCTTG+TGG + chr8_4:14697437-14697456 None:intergenic 30.0%
ATACTGAACTTGATTAAGGT+AGG - chr8_4:14697487-14697506 Msa1315350:intron 30.0%
ATAATGTCAAAATAACACCC+GGG + chr8_4:14697796-14697815 None:intergenic 30.0%
CTTACTCAGAAAAGGAATAT+GGG + chr8_4:14697951-14697970 None:intergenic 30.0%
ACTTACTCAGAAAAGGAATA+TGG + chr8_4:14697952-14697971 None:intergenic 30.0%
TTATGGTACTTACTCAGAAA+AGG + chr8_4:14697959-14697978 None:intergenic 30.0%
AGGATCAAAATGCATTGTTA+TGG + chr8_4:14697976-14697995 None:intergenic 30.0%
AATGGTTATTACAGTTGTGA+TGG - chr8_4:14698236-14698255 Msa1315350:intron 30.0%
TCATTAAATCCTTTGCCAAA+GGG + chr8_4:14698439-14698458 None:intergenic 30.0%
TTCATTAAATCCTTTGCCAA+AGG + chr8_4:14698440-14698459 None:intergenic 30.0%
AATGAAAGTTTATGAGTCCA+TGG - chr8_4:14698454-14698473 Msa1315350:CDS 30.0%
ATGAAAGTTTATGAGTCCAT+GGG - chr8_4:14698455-14698474 Msa1315350:CDS 30.0%
!! ACACATTAGCCTTTCAATAT+GGG - chr8_4:14698480-14698499 Msa1315350:CDS 30.0%
AGGTAATCTTTCTATCTTTC+AGG - chr8_4:14698522-14698541 Msa1315350:CDS 30.0%
GGTAATCTTTCTATCTTTCA+GGG - chr8_4:14698523-14698542 Msa1315350:CDS 30.0%
AGTATATGTAGTGCAAATGT+TGG - chr8_4:14698579-14698598 Msa1315350:CDS 30.0%
AAACAGTCGTTATATAGCAT+CGG + chr8_4:14698643-14698662 None:intergenic 30.0%
! TTTAGGTAGCAAAGTTGATT+TGG - chr8_4:14698692-14698711 Msa1315350:CDS 30.0%
TACATGTAACAAAACAAAGG+TGG + chr8_4:14698834-14698853 None:intergenic 30.0%
CAATGAATCAAGAAAACAGT+AGG + chr8_4:14698895-14698914 None:intergenic 30.0%
!! ATTTTCCCTGAATTTTGAAG+TGG - chr8_4:14699122-14699141 Msa1315350:CDS 30.0%
! CTCATTACAGTTCATTCTTT+TGG - chr8_4:14699181-14699200 Msa1315350:intron 30.0%
!! CAGATATTTTCTAGAAGTAG+AGG - chr8_4:14699216-14699235 Msa1315350:intron 30.0%
ATTGTTGTAATAACGCTGTA+GGG + chr8_4:14699283-14699302 None:intergenic 30.0%
TATTGTTGTAATAACGCTGT+AGG + chr8_4:14699284-14699303 None:intergenic 30.0%
TACAACAATACATATACGGA+CGG - chr8_4:14699294-14699313 Msa1315350:CDS 30.0%
GTATACTTTCAGATTACCTA+TGG + chr8_4:14699395-14699414 None:intergenic 30.0%
! TCAGATCAACATTACCTTTT+TGG - chr8_4:14699543-14699562 Msa1315350:CDS 30.0%
TCAATTCCATCTGCTAAATT+TGG + chr8_4:14699579-14699598 None:intergenic 30.0%
AATTTAGCAGATGGAATTGA+TGG - chr8_4:14699579-14699598 Msa1315350:intron 30.0%
ATTTAGCAGATGGAATTGAT+GGG - chr8_4:14699580-14699599 Msa1315350:intron 30.0%
ATGAACCTTTACATCATTAG+AGG - chr8_4:14699732-14699751 Msa1315350:intron 30.0%
TAGTACCTCTAATGATGTAA+AGG + chr8_4:14699740-14699759 None:intergenic 30.0%
ACTCGAATCATCATGTTATA+TGG + chr8_4:14699846-14699865 None:intergenic 30.0%
AACACAATAACAATGGCATT+TGG + chr8_4:14699873-14699892 None:intergenic 30.0%
! AGCTTTGACTTATCTATCAA+AGG - chr8_4:14700005-14700024 Msa1315350:CDS 30.0%
TCAAAGGACAAATATCACAT+AGG - chr8_4:14700021-14700040 Msa1315350:CDS 30.0%
ATGACACAAACTTGTGTAAT+TGG - chr8_4:14700345-14700364 Msa1315350:intron 30.0%
ACGTGCTATCAATATTATAC+AGG - chr8_4:14700426-14700445 Msa1315350:intron 30.0%
! TGTGATCGTTTTCATAATGT+TGG + chr8_4:14700478-14700497 None:intergenic 30.0%
AAGTTTACCAAACAAAGTCT+CGG + chr8_4:14700612-14700631 None:intergenic 30.0%
! CTATACCAAGTATTCCATTT+TGG + chr8_4:14700725-14700744 None:intergenic 30.0%
AAATGGAATACTTGGTATAG+AGG - chr8_4:14700725-14700744 Msa1315350:intron 30.0%
! CTTTATTTGTCGAACAAAGT+TGG - chr8_4:14700771-14700790 Msa1315350:intron 30.0%
! AAATTTGAACGCAACTTTTG+AGG + chr8_4:14700836-14700855 None:intergenic 30.0%
AGAGCATAATACGAAATCTA+TGG + chr8_4:14700955-14700974 None:intergenic 30.0%
!! TTTCACCTAATATTTTTCGG+AGG - chr8_4:14701001-14701020 Msa1315350:CDS 30.0%
TCAGTCTATTTCGATTGTTT+AGG - chr8_4:14701083-14701102 Msa1315350:intron 30.0%
CAGTCTATTTCGATTGTTTA+GGG - chr8_4:14701084-14701103 Msa1315350:intron 30.0%
! TTCATCCATGATTTAGAACA+CGG - chr8_4:14701110-14701129 Msa1315350:intron 30.0%
CCTTTCAATATGCTAATTGA+AGG + chr8_4:14701331-14701350 None:intergenic 30.0%
CCTTCAATTAGCATATTGAA+AGG - chr8_4:14701328-14701347 Msa1315350:intron 30.0%
TTAGCATATTGAAAGGATTC+AGG - chr8_4:14701335-14701354 Msa1315350:intron 30.0%
TAGCATATTGAAAGGATTCA+GGG - chr8_4:14701336-14701355 Msa1315350:intron 30.0%
! AATAAGCTGGAATTAGCTTA+TGG + chr8_4:14701454-14701473 None:intergenic 30.0%
AAGCTATCTTAGAGAGATTA+TGG + chr8_4:14701672-14701691 None:intergenic 30.0%
!! AAAATGGATTAGGTCGTATT+TGG + chr8_4:14701836-14701855 None:intergenic 30.0%
TGTCATAACATGTTAGTCAA+GGG - chr8_4:14701874-14701893 Msa1315350:CDS 30.0%
!!! TGGATTTCATTTTTTGAGCA+TGG - chr8_4:14701940-14701959 Msa1315350:intron 30.0%
!!! TTTCATTTTTTGAGCATGGA+AGG - chr8_4:14701944-14701963 Msa1315350:intron 30.0%
!!! TTCATTTTTTGAGCATGGAA+GGG - chr8_4:14701945-14701964 Msa1315350:intron 30.0%
! AAAAACCTAGTTCTTGAGTT+AGG - chr8_4:14702093-14702112 Msa1315350:CDS 30.0%
! AAAACCTAGTTCTTGAGTTA+GGG - chr8_4:14702094-14702113 Msa1315350:CDS 30.0%
ATTGATGCCAATATTGTTGA+TGG - chr8_4:14702149-14702168 Msa1315350:CDS 30.0%
TTCATTCACAATATTGTCTG+AGG + chr8_4:14702194-14702213 None:intergenic 30.0%
TGTGAATGAACTAATAACTG+AGG - chr8_4:14702204-14702223 Msa1315350:CDS 30.0%
TACATTAATATGTGCCCTTA+GGG + chr8_4:14702365-14702384 None:intergenic 30.0%
AAGAAACATTTGTCTCTTTC+TGG - chr8_4:14702584-14702603 Msa1315350:intron 30.0%
CATCAATAAGTCTTACTAAC+AGG + chr8_4:14702619-14702638 None:intergenic 30.0%
ACTTCACAATGCAAACTTAT+TGG - chr8_4:14702670-14702689 Msa1315350:intron 30.0%
! CGAATTTGTAAGTTTGAGTT+AGG - chr8_4:14702816-14702835 Msa1315350:intron 30.0%
GACTAACACAAATTACAAGA+TGG - chr8_4:14702838-14702857 Msa1315350:intron 30.0%
!! CGGTTTTGTAATATTAGGTT+AGG - chr8_4:14702953-14702972 Msa1315350:intron 30.0%
!! CTAGTCTTAAAATTTGGTAC+GGG + chr8_4:14702979-14702998 None:intergenic 30.0%
!! CCTAGTCTTAAAATTTGGTA+CGG + chr8_4:14702980-14702999 None:intergenic 30.0%
AACTTGTGTATTCCATACAT+TGG - chr8_4:14703138-14703157 Msa1315350:intron 30.0%
ACAGTTCAATTTCCAATGTA+TGG + chr8_4:14703153-14703172 None:intergenic 30.0%
! CTCTTTAAGGATTCCTAATT+AGG + chr8_4:14703198-14703217 None:intergenic 30.0%
TATAGAAACCAGTAATCTGA+TGG - chr8_4:14703298-14703317 Msa1315350:intron 30.0%
!! TTCTTTTTCTTTCTGGTGTA+TGG - chr8_4:14703360-14703379 Msa1315350:intron 30.0%
! TTTTCATAAGCAATCCTAGA+GGG + chr8_4:14703727-14703746 None:intergenic 30.0%
! ATTTTCATAAGCAATCCTAG+AGG + chr8_4:14703728-14703747 None:intergenic 30.0%
GCAAAATTGTGTTTACCAAT+TGG + chr8_4:14703904-14703923 None:intergenic 30.0%
TTTGAAAATTGGGTTACTCA+TGG - chr8_4:14703991-14704010 Msa1315350:five_prime_UTR 30.0%
! CTTTGCTGTACAGAAATAAA+TGG - chr8_4:14704091-14704110 Msa1315350:five_prime_UTR 30.0%
!! GAAGCTGATTTTTGTTCAAA+AGG - chr8_4:14704155-14704174 Msa1315350:five_prime_UTR 30.0%
TAATTGATGCACATAAGATG+AGG + chr8_4:14704393-14704412 None:intergenic 30.0%
!!! ACTTGTTTTTGGGTCTGTTT+TGG - chr8_4:14692841-14692860 Msa1315350:three_prime_UTR 35.0%
!!! AGCTTTGTTTTGAAGCTCAA+GGG - chr8_4:14692961-14692980 Msa1315350:CDS 35.0%
TTTGCTACATGCAGAAGTTT+AGG - chr8_4:14693084-14693103 Msa1315350:intron 35.0%
GTGGATTCTTCAAGAAAACA+TGG - chr8_4:14693510-14693529 Msa1315350:intron 35.0%
TATAATCTTTCAAGCCAAGC+AGG + chr8_4:14693550-14693569 None:intergenic 35.0%
AACACAAATGACACCACAAA+TGG + chr8_4:14693575-14693594 None:intergenic 35.0%
! TCTCCATTGTTTTCAGATTG+TGG - chr8_4:14693669-14693688 Msa1315350:intron 35.0%
! CTCCATTGTTTTCAGATTGT+GGG - chr8_4:14693670-14693689 Msa1315350:intron 35.0%
! TCCATTGTTTTCAGATTGTG+GGG - chr8_4:14693671-14693690 Msa1315350:intron 35.0%
GCTTATGCCAATAAGCTATT+TGG - chr8_4:14693814-14693833 Msa1315350:intron 35.0%
TATGCCAATAAGCTATTTGG+AGG - chr8_4:14693817-14693836 Msa1315350:intron 35.0%
AGTTCCTCCAAATAGCTTAT+TGG + chr8_4:14693824-14693843 None:intergenic 35.0%
AAAAAGTAATAGGGGGAGTT+TGG + chr8_4:14693958-14693977 None:intergenic 35.0%
TAGTCGGCAAAAAGTAATAG+GGG + chr8_4:14693966-14693985 None:intergenic 35.0%
GGAATCTTTCAAGAGAAATG+TGG + chr8_4:14694017-14694036 None:intergenic 35.0%
TCCTCAATTTGGTAAGATTG+AGG - chr8_4:14694207-14694226 Msa1315350:intron 35.0%
TCCTCAATCTTACCAAATTG+AGG + chr8_4:14694211-14694230 None:intergenic 35.0%
AGATTCTGGATATAGTCACA+TGG + chr8_4:14694237-14694256 None:intergenic 35.0%
GTGACTATATCCAGAATCTT+TGG - chr8_4:14694238-14694257 Msa1315350:intron 35.0%
CAGAATCTTTGGCTGAAAAT+GGG - chr8_4:14694249-14694268 Msa1315350:intron 35.0%
AGAATCTTTGGCTGAAAATG+GGG - chr8_4:14694250-14694269 Msa1315350:intron 35.0%
AATGGGGAAAAGGCTAATTA+AGG - chr8_4:14694266-14694285 Msa1315350:intron 35.0%
! TTCTGGAAATGGGATCTAAA+AGG - chr8_4:14694323-14694342 Msa1315350:intron 35.0%
! AACGACAAGATTTTCTCAGA+AGG + chr8_4:14694609-14694628 None:intergenic 35.0%
GCTCAGAGATTCTATATGAT+TGG - chr8_4:14694691-14694710 Msa1315350:intron 35.0%
GGTCTTAAAGATTGACAGAT+TGG - chr8_4:14694741-14694760 Msa1315350:CDS 35.0%
!! ACAACTTGCTATGGAATCAT+CGG - chr8_4:14694880-14694899 Msa1315350:intron 35.0%
GTAATAAGCAGCATGTAGTA+TGG + chr8_4:14695061-14695080 None:intergenic 35.0%
! ACATGCTGCTTATTACAAAG+CGG - chr8_4:14695065-14695084 Msa1315350:intron 35.0%
TTCAAGTGTGCGATCAAATT+TGG - chr8_4:14695159-14695178 Msa1315350:intron 35.0%
!! CATTTTCTAAGGATGAGAAC+AGG - chr8_4:14695182-14695201 Msa1315350:intron 35.0%
ATGTACCTGTAATGTGTCTA+TGG - chr8_4:14695222-14695241 Msa1315350:intron 35.0%
ATGTACCATAGACACATTAC+AGG + chr8_4:14695230-14695249 None:intergenic 35.0%
! TTCATTTTACGGAACTGTAC+AGG - chr8_4:14695648-14695667 Msa1315350:intron 35.0%
! GAGTAAAACAAGGTATTTCC+AGG - chr8_4:14695711-14695730 Msa1315350:intron 35.0%
CAAGAAGTTTCTATGCAGTA+TGG - chr8_4:14695901-14695920 Msa1315350:intron 35.0%
ATGCAGTATGGATCTTACAA+AGG - chr8_4:14695913-14695932 Msa1315350:intron 35.0%
CTTATCTGGTCATAATGTCA+CGG - chr8_4:14695985-14696004 Msa1315350:intron 35.0%
TTATCTGGTCATAATGTCAC+GGG - chr8_4:14695986-14696005 Msa1315350:intron 35.0%
ATAATCTCCAGAATACTTCC+TGG - chr8_4:14696068-14696087 Msa1315350:intron 35.0%
ACATGAAAGAAACTGGCAAT+AGG + chr8_4:14696286-14696305 None:intergenic 35.0%
ACGCAAAACATGAAAGAAAC+TGG + chr8_4:14696293-14696312 None:intergenic 35.0%
TGGTAATCAAGTCAAACTTG+CGG + chr8_4:14696455-14696474 None:intergenic 35.0%
! TTGACTTGATTACCATTGCT+AGG - chr8_4:14696460-14696479 Msa1315350:CDS 35.0%
! ACGAGTTTCTAGACAAGATT+TGG - chr8_4:14696657-14696676 Msa1315350:CDS 35.0%
GACTAGAGATACATAAGAGA+AGG + chr8_4:14696729-14696748 None:intergenic 35.0%
!!! GTTTCTTTATTTTGTGGTGC+AGG - chr8_4:14696782-14696801 Msa1315350:CDS 35.0%
AGGTTTCATATTCAATGGAG+AGG + chr8_4:14696962-14696981 None:intergenic 35.0%
CAAACGTAAGTGAGAAACAA+AGG + chr8_4:14697026-14697045 None:intergenic 35.0%
! CTTTGTTTCTCACTTACGTT+TGG - chr8_4:14697024-14697043 Msa1315350:intron 35.0%
TACGTTTGGGTAAACAACTT+AGG - chr8_4:14697038-14697057 Msa1315350:intron 35.0%
TAACATAATATGGGCCTGTT+TGG + chr8_4:14697350-14697369 None:intergenic 35.0%
! TTTAGACTGACTGCTCATTT+TGG - chr8_4:14697370-14697389 Msa1315350:intron 35.0%
GAGAATCTTGTCATGAGATA+TGG - chr8_4:14697451-14697470 Msa1315350:CDS 35.0%
CGAGATGGAAAAATAAAACC+TGG + chr8_4:14697542-14697561 None:intergenic 35.0%
ATCTTAGTTTAGACACGAGA+TGG + chr8_4:14697557-14697576 None:intergenic 35.0%
! ATTGTCTGAGGTATCTTCAT+TGG - chr8_4:14697703-14697722 Msa1315350:CDS 35.0%
! TTGTCTGAGGTATCTTCATT+GGG - chr8_4:14697704-14697723 Msa1315350:CDS 35.0%
!!! TTTTTTGGTCCATGCTCAAT+AGG - chr8_4:14697763-14697782 Msa1315350:intron 35.0%
ATTAACAACTTTCAGCAGCA+AGG - chr8_4:14697819-14697838 Msa1315350:intron 35.0%
ATTGAAGATCAAACCATCTG+TGG - chr8_4:14698045-14698064 Msa1315350:intron 35.0%
GATGAATTTCTTGTTGAGCA+AGG - chr8_4:14698170-14698189 Msa1315350:intron 35.0%
GCTGATAAGGAAACAGAAAA+TGG - chr8_4:14698212-14698231 Msa1315350:intron 35.0%
AAGGAAACAGAAAATGGCAA+TGG - chr8_4:14698218-14698237 Msa1315350:intron 35.0%
ATAAGCATACTGTGCAACAT+TGG + chr8_4:14698345-14698364 None:intergenic 35.0%
AATGTTGCACAGTATGCTTA+TGG - chr8_4:14698344-14698363 Msa1315350:intron 35.0%
GAATCCCCACATATTAAACT+TGG - chr8_4:14698410-14698429 Msa1315350:intron 35.0%
GTTGCCAAGTTTAATATGTG+GGG + chr8_4:14698417-14698436 None:intergenic 35.0%
GGTTGCCAAGTTTAATATGT+GGG + chr8_4:14698418-14698437 None:intergenic 35.0%
TATTAAACTTGGCAACCCTT+TGG - chr8_4:14698421-14698440 Msa1315350:intron 35.0%
!! GACACATTAGCCTTTCAATA+TGG - chr8_4:14698479-14698498 Msa1315350:CDS 35.0%
!! CACATTAGCCTTTCAATATG+GGG - chr8_4:14698481-14698500 Msa1315350:CDS 35.0%
!! ACATTAGCCTTTCAATATGG+GGG - chr8_4:14698482-14698501 Msa1315350:CDS 35.0%
AGTGCAAATGTTGGACTTTA+TGG - chr8_4:14698588-14698607 Msa1315350:CDS 35.0%
! CGTTATATAGCATCGGATTT+CGG + chr8_4:14698636-14698655 None:intergenic 35.0%
TGATGATCTTCAACTCACTA+GGG + chr8_4:14698759-14698778 None:intergenic 35.0%
ATGATGATCTTCAACTCACT+AGG + chr8_4:14698760-14698779 None:intergenic 35.0%
! CATCATCACTTCTTGATTTG+AGG - chr8_4:14698993-14699012 Msa1315350:intron 35.0%
TTATGAACTCCTCTCGTAAA+AGG - chr8_4:14699024-14699043 Msa1315350:CDS 35.0%
! TTTCTAGAAGTAGAGGTCAA+TGG - chr8_4:14699223-14699242 Msa1315350:intron 35.0%
ACAACAATACATATACGGAC+GGG - chr8_4:14699295-14699314 Msa1315350:CDS 35.0%
!! CATTACCTTTTTGGAAGTCA+TGG - chr8_4:14699552-14699571 Msa1315350:intron 35.0%
! ATGGAATTGATGGGTATGTT+TGG - chr8_4:14699589-14699608 Msa1315350:intron 35.0%
!!! TAAGAAATTGTTTTGGAGGG+AGG - chr8_4:14699646-14699665 Msa1315350:intron 35.0%
GTGGAGTAACACAATAACAA+TGG + chr8_4:14699880-14699899 None:intergenic 35.0%
TCTTTCGTCATCAAAAAAGG+AGG + chr8_4:14700067-14700086 None:intergenic 35.0%
ATTAGAAGATCACAATCCGA+TGG - chr8_4:14700159-14700178 Msa1315350:intron 35.0%
! TCAGGATTTTCAGATGAGTA+CGG + chr8_4:14700240-14700259 None:intergenic 35.0%
! TCCTGATAAGCAATCTCTTT+TGG - chr8_4:14700254-14700273 Msa1315350:intron 35.0%
TCCAAAAGAGATTGCTTATC+AGG + chr8_4:14700258-14700277 None:intergenic 35.0%
CACGTAAGTTTCTAAACATG+TGG + chr8_4:14700411-14700430 None:intergenic 35.0%
TTATACAGGCAAGTTTATGC+AGG - chr8_4:14700440-14700459 Msa1315350:intron 35.0%
CTTTCTTCCTAAATGAGAAG+CGG - chr8_4:14700652-14700671 Msa1315350:intron 35.0%
!!! ACTTAGAAGTTTGTTTTGGC+TGG + chr8_4:14700680-14700699 None:intergenic 35.0%
!! CCTCACTTAGAAGTTTGTTT+TGG + chr8_4:14700684-14700703 None:intergenic 35.0%
CCAAAACAAACTTCTAAGTG+AGG - chr8_4:14700681-14700700 Msa1315350:intron 35.0%
!!! TCGAACAAAGTTGGTTTTGT+TGG - chr8_4:14700780-14700799 Msa1315350:intron 35.0%
!!! GTTGGTTTTGTTGGTTGTTT+TGG - chr8_4:14700789-14700808 Msa1315350:intron 35.0%
AAAGTTGCGTTCAAATTTGC+TGG - chr8_4:14700838-14700857 Msa1315350:intron 35.0%
TTAGGCCTCCGAAAAATATT+AGG + chr8_4:14701009-14701028 None:intergenic 35.0%
TCTATTTCGATTGTTTAGGG+AGG - chr8_4:14701087-14701106 Msa1315350:intron 35.0%
! ATTGTCCGTGTTCTAAATCA+TGG + chr8_4:14701118-14701137 None:intergenic 35.0%
GGACTATAGCATGAACATAA+AGG + chr8_4:14701164-14701183 None:intergenic 35.0%
TAATTGAAGGAACTGAGTGA+AGG + chr8_4:14701318-14701337 None:intergenic 35.0%
AGCATATTGAAAGGATTCAG+GGG - chr8_4:14701337-14701356 Msa1315350:intron 35.0%
ATCACAAGTGCTTATGTCAA+TGG + chr8_4:14701392-14701411 None:intergenic 35.0%
! AAGCACTTGTGATACTGTTT+TGG - chr8_4:14701399-14701418 Msa1315350:CDS 35.0%
! AGCACTTGTGATACTGTTTT+GGG - chr8_4:14701400-14701419 Msa1315350:CDS 35.0%
!!! ATACTGTTTTGGGGAGTTTA+TGG - chr8_4:14701410-14701429 Msa1315350:CDS 35.0%
! GAATTAGCTTATGGACACAT+CGG + chr8_4:14701445-14701464 None:intergenic 35.0%
AGTGCGTAATCAAGAGTTTA+TGG - chr8_4:14701604-14701623 Msa1315350:intron 35.0%
CTGTCATAACATGTTAGTCA+AGG - chr8_4:14701873-14701892 Msa1315350:CDS 35.0%
TACTGAAGTGAATTCTGATG+TGG - chr8_4:14701904-14701923 Msa1315350:CDS 35.0%
GTGAATTCTGATGTGGAATT+AGG - chr8_4:14701911-14701930 Msa1315350:CDS 35.0%
AATTCTGATGTGGAATTAGG+AGG - chr8_4:14701914-14701933 Msa1315350:CDS 35.0%
ATTCTGATGTGGAATTAGGA+GGG - chr8_4:14701915-14701934 Msa1315350:CDS 35.0%
ACCTGTACCATCAACAATAT+TGG + chr8_4:14702159-14702178 None:intergenic 35.0%
TGAATCTGGACCTATCTTAA+AGG - chr8_4:14702237-14702256 Msa1315350:CDS 35.0%
! ACATAACTGCCTTTTCAGTT+AGG - chr8_4:14702298-14702317 Msa1315350:intron 35.0%
GTACATTAATATGTGCCCTT+AGG + chr8_4:14702366-14702385 None:intergenic 35.0%
TTGTCTCTTTCTGGATTTCA+AGG - chr8_4:14702593-14702612 Msa1315350:intron 35.0%
!! GATCTCTATTTTGTTGTCCT+GGG - chr8_4:14702715-14702734 Msa1315350:intron 35.0%
AGCTTGTAAGATGAGAGATA+TGG + chr8_4:14702926-14702945 None:intergenic 35.0%
ATATCTCTCATCTTACAAGC+TGG - chr8_4:14702925-14702944 Msa1315350:intron 35.0%
!!! CCGTACCAAATTTTAAGACT+AGG - chr8_4:14702977-14702996 Msa1315350:intron 35.0%
!! AATCCTTAAAGAGTGCTCTT+AGG - chr8_4:14703205-14703224 Msa1315350:intron 35.0%
! ACTGGTTTCTATACGAAACT+TGG + chr8_4:14703291-14703310 None:intergenic 35.0%
AAACCAGTAATCTGATGGTA+TGG - chr8_4:14703303-14703322 Msa1315350:intron 35.0%
AAATAAGAGAGCTTAGAGAG+AGG + chr8_4:14703428-14703447 None:intergenic 35.0%
GTAACTGATAAGCTCTCATA+AGG - chr8_4:14703514-14703533 Msa1315350:intron 35.0%
AAGGTAGAAGCTAATCCAAA+CGG - chr8_4:14703533-14703552 Msa1315350:intron 35.0%
AAAAACACTAAGAACCCGTT+TGG + chr8_4:14703551-14703570 None:intergenic 35.0%
!!! ACGGGTTCTTAGTGTTTTTT+TGG - chr8_4:14703552-14703571 Msa1315350:intron 35.0%
CTTTCAATGTATTTCAGGAG+AGG - chr8_4:14703923-14703942 Msa1315350:CDS 35.0%
ACCTATATCAACTTATCCGA+AGG - chr8_4:14704054-14704073 Msa1315350:five_prime_UTR 35.0%
!! TCCTTCGGATAAGTTGATAT+AGG + chr8_4:14704058-14704077 None:intergenic 35.0%
AGTCATGAATTCTCATCCTT+CGG + chr8_4:14704073-14704092 None:intergenic 35.0%
GATACAAAAGCAAATAGCAG+TGG - chr8_4:14704122-14704141 Msa1315350:five_prime_UTR 35.0%
! TATTTTCATTTGGGAGGTAG+TGG - chr8_4:14704198-14704217 Msa1315350:five_prime_UTR 35.0%
TTGATACTGTACCTAATTGG+GGG + chr8_4:14704261-14704280 None:intergenic 35.0%
CTTGATACTGTACCTAATTG+GGG + chr8_4:14704262-14704281 None:intergenic 35.0%
GCTTGATACTGTACCTAATT+GGG + chr8_4:14704263-14704282 None:intergenic 35.0%
TGCTTGATACTGTACCTAAT+TGG + chr8_4:14704264-14704283 None:intergenic 35.0%
! TTTAAACCTTAGTTTGGGTC+TGG - chr8_4:14704355-14704374 Msa1315350:five_prime_UTR 35.0%
!!! GAGCTTTGTTTTGAAGCTCA+AGG - chr8_4:14692960-14692979 Msa1315350:CDS 40.0%
AGGGATCTGAATTGTGATGA+TGG - chr8_4:14692980-14692999 Msa1315350:CDS 40.0%
GATGGAGATTGAAGAAGAGA+AGG - chr8_4:14692998-14693017 Msa1315350:CDS 40.0%
GAGATTGAAGAAGAGAAGGT+GGG - chr8_4:14693002-14693021 Msa1315350:CDS 40.0%
AGATTGAAGAAGAGAAGGTG+GGG - chr8_4:14693003-14693022 Msa1315350:CDS 40.0%
TAGGCTCTATGAAACTTCTC+AGG - chr8_4:14693103-14693122 Msa1315350:intron 40.0%
TCTGTTTAATTGGATTCGCG+TGG - chr8_4:14693491-14693510 Msa1315350:intron 40.0%
AAGAAAACATGGATCCATCC+AGG - chr8_4:14693521-14693540 Msa1315350:intron 40.0%
! CCATTGTTTTCAGATTGTGG+GGG - chr8_4:14693672-14693691 Msa1315350:intron 40.0%
AGTCGGCAAAAAGTAATAGG+GGG + chr8_4:14693965-14693984 None:intergenic 40.0%
! CCATTTTCAGCCAAAGATTC+TGG + chr8_4:14694251-14694270 None:intergenic 40.0%
CCAGAATCTTTGGCTGAAAA+TGG - chr8_4:14694248-14694267 Msa1315350:intron 40.0%
TTTGGCTGAAAATGGGGAAA+AGG - chr8_4:14694256-14694275 Msa1315350:intron 40.0%
!! AAAATGCCGCTTTCTTCTTC+TGG - chr8_4:14694306-14694325 Msa1315350:intron 40.0%
CCATTTCCAGAAGAAGAAAG+CGG + chr8_4:14694315-14694334 None:intergenic 40.0%
! CGCTTTCTTCTTCTGGAAAT+GGG - chr8_4:14694313-14694332 Msa1315350:intron 40.0%
TTATCTGTGGGAGAAAAGGA+AGG + chr8_4:14694352-14694371 None:intergenic 40.0%
AACAAATTTAAGCCCTCCTG+TGG + chr8_4:14694860-14694879 None:intergenic 40.0%
ATTACAAAGCGGAGGAAGAT+CGG - chr8_4:14695076-14695095 Msa1315350:intron 40.0%
TTTGATCGCACACTTGAATG+TGG + chr8_4:14695157-14695176 None:intergenic 40.0%
AGTACCACAGAAAGATGAGA+GGG + chr8_4:14695502-14695521 None:intergenic 40.0%
AGTTCTTAACTCGTGGAATC+AGG - chr8_4:14696044-14696063 Msa1315350:intron 40.0%
GAAGTTAATTAGTACGGTGC+TGG - chr8_4:14696159-14696178 Msa1315350:intron 40.0%
! CATATCACTAGGCTCTTTTC+TGG + chr8_4:14696347-14696366 None:intergenic 40.0%
CATTACATGGTATCACGTGT+AGG - chr8_4:14696410-14696429 Msa1315350:CDS 40.0%
CGAGTGTACCTATACTATAC+CGG - chr8_4:14696620-14696639 Msa1315350:intron 40.0%
TGAAACGAGGAGTCAATGAA+AGG - chr8_4:14696809-14696828 Msa1315350:intron 40.0%
GAAACGAGGAGTCAATGAAA+GGG - chr8_4:14696810-14696829 Msa1315350:intron 40.0%
AAACGAGGAGTCAATGAAAG+GGG - chr8_4:14696811-14696830 Msa1315350:intron 40.0%
!! CACAGAACTGATTTGCATTG+GGG + chr8_4:14696896-14696915 None:intergenic 40.0%
!! CCACAGAACTGATTTGCATT+GGG + chr8_4:14696897-14696916 None:intergenic 40.0%
!! ACCACAGAACTGATTTGCAT+TGG + chr8_4:14696898-14696917 None:intergenic 40.0%
AAGCACTTGGGAGACTATTT+GGG + chr8_4:14697290-14697309 None:intergenic 40.0%
TAAGCACTTGGGAGACTATT+TGG + chr8_4:14697291-14697310 None:intergenic 40.0%
ATCTACTGGCATAAGCACTT+GGG + chr8_4:14697302-14697321 None:intergenic 40.0%
TATCTACTGGCATAAGCACT+TGG + chr8_4:14697303-14697322 None:intergenic 40.0%
AGCCAATCCAATTTCCAAAC+AGG - chr8_4:14697333-14697352 Msa1315350:intron 40.0%
ATATGGGCCTGTTTGGAAAT+TGG + chr8_4:14697343-14697362 None:intergenic 40.0%
! AGTCTTGTGGCTTCAAACAT+TGG + chr8_4:14697424-14697443 None:intergenic 40.0%
TAGGCATTTCTACACGTGTA+AGG - chr8_4:14697506-14697525 Msa1315350:intron 40.0%
ATCTTCATTGGGATCTGACT+TGG - chr8_4:14697715-14697734 Msa1315350:CDS 40.0%
GGACAAAAACCTATTGAGCA+TGG + chr8_4:14697775-14697794 None:intergenic 40.0%
! TGCTCAATAGGTTTTTGTCC+CGG - chr8_4:14697775-14697794 Msa1315350:intron 40.0%
ACCAATGTGCTTTCACAACT+GGG - chr8_4:14697844-14697863 Msa1315350:intron 40.0%
GAATATGGGAATAATCCCTC+TGG + chr8_4:14697937-14697956 None:intergenic 40.0%
GCATTAGTACAACAGCAAAG+AGG + chr8_4:14697996-14698015 None:intergenic 40.0%
AAGCACTCACATTCCAATTG+TGG + chr8_4:14698074-14698093 None:intergenic 40.0%
TTACAGTGTCAAAGCCAAGA+CGG - chr8_4:14698271-14698290 Msa1315350:intron 40.0%
TAAACCCAAATGCATGTAGC+TGG + chr8_4:14698388-14698407 None:intergenic 40.0%
GGGTTGCCAAGTTTAATATG+TGG + chr8_4:14698419-14698438 None:intergenic 40.0%
ATGATCTTCAACTCACTAGG+GGG + chr8_4:14698757-14698776 None:intergenic 40.0%
GATGATCTTCAACTCACTAG+GGG + chr8_4:14698758-14698777 None:intergenic 40.0%
TCTATTGTTGGCATGTGAAG+TGG + chr8_4:14698797-14698816 None:intergenic 40.0%
TGTGTGTGAGCTTCTATTGT+TGG + chr8_4:14698809-14698828 None:intergenic 40.0%
TAGAAGTAGAGGTCAATGGA+AGG - chr8_4:14699227-14699246 Msa1315350:intron 40.0%
TAGGGTTCGAATAAGCTCTT+GGG + chr8_4:14699265-14699284 None:intergenic 40.0%
ACATGCATAGTTGCTTCCAT+AGG - chr8_4:14699376-14699395 Msa1315350:intron 40.0%
TTGGACCATGACTTCCAAAA+AGG + chr8_4:14699560-14699579 None:intergenic 40.0%
CATGGTCCAAATTTAGCAGA+TGG - chr8_4:14699570-14699589 Msa1315350:intron 40.0%
CAATCCGATGGCAATATTCT+CGG - chr8_4:14700171-14700190 Msa1315350:intron 40.0%
TTCACCGAGAATATTGCCAT+CGG + chr8_4:14700178-14700197 None:intergenic 40.0%
GTGAAAGTGACTCTACAACT+AGG - chr8_4:14700193-14700212 Msa1315350:intron 40.0%
CCACAAGTAGACTTCAATAG+AGG + chr8_4:14700282-14700301 None:intergenic 40.0%
CCTCTATTGAAGTCTACTTG+TGG - chr8_4:14700279-14700298 Msa1315350:intron 40.0%
GAACTTCTATCTGTCAATGC+AGG - chr8_4:14700301-14700320 Msa1315350:intron 40.0%
AGGCAAGTTTATGCAGGAAT+GGG - chr8_4:14700446-14700465 Msa1315350:intron 40.0%
GTGAAGAAGAACTACTTGAC+AGG - chr8_4:14700579-14700598 Msa1315350:intron 40.0%
TGTAGTTCCGAGACTTTGTT+TGG - chr8_4:14700602-14700621 Msa1315350:intron 40.0%
TTCGCAAAATTGCATGAGAG+CGG + chr8_4:14701185-14701204 None:intergenic 40.0%
GGAAGACATGAAAAAGAGAG+CGG - chr8_4:14701228-14701247 Msa1315350:intron 40.0%
GAAGACATGAAAAAGAGAGC+GGG - chr8_4:14701229-14701248 Msa1315350:intron 40.0%
AAGACATGAAAAAGAGAGCG+GGG - chr8_4:14701230-14701249 Msa1315350:intron 40.0%
AAAAGGTGATTGCTAAGCTC+TGG + chr8_4:14701267-14701286 None:intergenic 40.0%
GCATATTGAAAGGATTCAGG+GGG - chr8_4:14701338-14701357 Msa1315350:intron 40.0%
! GCACTTGTGATACTGTTTTG+GGG - chr8_4:14701401-14701420 Msa1315350:CDS 40.0%
CAAACCCTAACTCAAGAACT+AGG + chr8_4:14702101-14702120 None:intergenic 40.0%
! CTAGTTCTTGAGTTAGGGTT+TGG - chr8_4:14702099-14702118 Msa1315350:CDS 40.0%
!! GCCAATATTGTTGATGGTAC+AGG - chr8_4:14702155-14702174 Msa1315350:CDS 40.0%
TGAACTAATAACTGAGGTGC+CGG - chr8_4:14702210-14702229 Msa1315350:CDS 40.0%
AAATGCTAACATGTGCCCTA+AGG - chr8_4:14702347-14702366 Msa1315350:intron 40.0%
AATGCTAACATGTGCCCTAA+GGG - chr8_4:14702348-14702367 Msa1315350:intron 40.0%
! CTTGCTAACTTGTGCCATTA+GGG + chr8_4:14702513-14702532 None:intergenic 40.0%
! TCTTGCTAACTTGTGCCATT+AGG + chr8_4:14702514-14702533 None:intergenic 40.0%
!! CGATCTCTATTTTGTTGTCC+TGG - chr8_4:14702714-14702733 Msa1315350:intron 40.0%
CAAAGCTTATCTGGCTACAT+GGG - chr8_4:14702893-14702912 Msa1315350:intron 40.0%
!!! CATCTTACAAGCTGGTTTTC+CGG - chr8_4:14702933-14702952 Msa1315350:intron 40.0%
AATGTTCGGGCACTCTTTAA+AGG - chr8_4:14703080-14703099 Msa1315350:intron 40.0%
!! TGTCCTAAGAGCACTCTTTA+AGG + chr8_4:14703211-14703230 None:intergenic 40.0%
TTGCCATACCATCAGATTAC+TGG + chr8_4:14703309-14703328 None:intergenic 40.0%
TCTGATGGTATGGCAATACA+TGG - chr8_4:14703313-14703332 Msa1315350:intron 40.0%
TGGCAATACATGGTGAATGA+TGG - chr8_4:14703323-14703342 Msa1315350:intron 40.0%
AGGTAGAAGCTAATCCAAAC+GGG - chr8_4:14703534-14703553 Msa1315350:intron 40.0%
CTTATTTCCATAAGCCCTCT+AGG - chr8_4:14703710-14703729 Msa1315350:intron 40.0%
! TTTTCTAGGCTGCAACCAAT+TGG - chr8_4:14703886-14703905 Msa1315350:CDS 40.0%
GATATAGGTCAGGAGACATT+AGG + chr8_4:14704043-14704062 None:intergenic 40.0%
!! CGGATAAGTTGATATAGGTC+AGG + chr8_4:14704053-14704072 None:intergenic 40.0%
TGATACTGTACCTAATTGGG+GGG + chr8_4:14704260-14704279 None:intergenic 40.0%
GGAGATTGAAGAAGAGAAGG+TGG - chr8_4:14693001-14693020 Msa1315350:CDS 45.0%
!!! GTTGGTGCTGGTTTTGAAGA+TGG - chr8_4:14693047-14693066 Msa1315350:intron 45.0%
! GTGCAGTTTTCTTGTTCTGC+TGG - chr8_4:14693240-14693259 Msa1315350:intron 45.0%
CCCCCACAATCTGAAAACAA+TGG + chr8_4:14693675-14693694 None:intergenic 45.0%
!! TTTCAGATTGTGGGGGCATT+TGG - chr8_4:14693679-14693698 Msa1315350:intron 45.0%
CAACATGCATGACACTGTGA+TGG + chr8_4:14694136-14694155 None:intergenic 45.0%
! CCGCTTTCTTCTTCTGGAAA+TGG - chr8_4:14694312-14694331 Msa1315350:intron 45.0%
AGACAAACGAAGTTCGTTGC+CGG + chr8_4:14694514-14694533 None:intergenic 45.0%
!! ACGAAAGAGCACTATTGGTG+TGG - chr8_4:14694649-14694668 Msa1315350:intron 45.0%
! TGAAATGCTGAAGCGTCTAC+AGG - chr8_4:14694822-14694841 Msa1315350:intron 45.0%
! TGCTGCTTATTACAAAGCGG+AGG - chr8_4:14695068-14695087 Msa1315350:intron 45.0%
AGGAAGATCGGCACAATATG+TGG - chr8_4:14695088-14695107 Msa1315350:intron 45.0%
CGCACACTTGAATGTGGAAT+TGG + chr8_4:14695151-14695170 None:intergenic 45.0%
TTCAGTGCGTATGCACAATG+TGG - chr8_4:14695461-14695480 Msa1315350:intron 45.0%
TCAGTGCGTATGCACAATGT+GGG - chr8_4:14695462-14695481 Msa1315350:intron 45.0%
!! AAGATGAGAGGGTTGACTTG+AGG + chr8_4:14695491-14695510 None:intergenic 45.0%
TCAACCCTCTCATCTTTCTG+TGG - chr8_4:14695495-14695514 Msa1315350:intron 45.0%
GAGTACCACAGAAAGATGAG+AGG + chr8_4:14695503-14695522 None:intergenic 45.0%
AGGTATTTCCAGGGTTCACA+TGG - chr8_4:14695721-14695740 Msa1315350:intron 45.0%
GGTATTTCCAGGGTTCACAT+GGG - chr8_4:14695722-14695741 Msa1315350:intron 45.0%
TGGAACGAGTTCTTAACTCG+TGG - chr8_4:14696037-14696056 Msa1315350:intron 45.0%
!! CAACAGTCCAGGAAGTATTC+TGG + chr8_4:14696078-14696097 None:intergenic 45.0%
ATAGACTAAGGCAACAGTCC+AGG + chr8_4:14696089-14696108 None:intergenic 45.0%
TGGACTGTTGCCTTAGTCTA+TGG - chr8_4:14696088-14696107 Msa1315350:intron 45.0%
!!! CTCTTTTCTGGTGCTGTCAA+TGG + chr8_4:14696335-14696354 None:intergenic 45.0%
ACTTGCGGCCAGATATAGAA+AGG + chr8_4:14696440-14696459 None:intergenic 45.0%
CATCTTTGCACTTGTGATCC+TGG - chr8_4:14696580-14696599 Msa1315350:intron 45.0%
ATTTGGCTGCCATTCCTTAC+TGG - chr8_4:14696674-14696693 Msa1315350:CDS 45.0%
! TGGTGCAGGTATTTGAAACG+AGG - chr8_4:14696796-14696815 Msa1315350:CDS 45.0%
GTCTTTGCAGATGCTAGTGA+TGG - chr8_4:14696868-14696887 Msa1315350:intron 45.0%
CCCAATGCAAATCAGTTCTG+TGG - chr8_4:14696894-14696913 Msa1315350:intron 45.0%
AAAAGAGAGGGATTGAACCC+CGG + chr8_4:14696927-14696946 None:intergenic 45.0%
! AATCCCTCTCTTTTGGTCTC+AGG - chr8_4:14696933-14696952 Msa1315350:intron 45.0%
CTTCCTGAGACCAAAAGAGA+GGG + chr8_4:14696939-14696958 None:intergenic 45.0%
GGCCTGTTTGGAAATTGGAT+TGG + chr8_4:14697338-14697357 None:intergenic 45.0%
GTTCGCAGAATAGTTTCACG+CGG + chr8_4:14697633-14697652 None:intergenic 45.0%
!! CTTAACAGCATTGGCGAACT+CGG + chr8_4:14697655-14697674 None:intergenic 45.0%
TGAGTAAGGAGGATTGTCTG+AGG - chr8_4:14697691-14697710 Msa1315350:CDS 45.0%
!! ATCTGACTTGGCATTCGAGA+CGG - chr8_4:14697727-14697746 Msa1315350:CDS 45.0%
! GCTCAATAGGTTTTTGTCCC+GGG - chr8_4:14697776-14697795 Msa1315350:intron 45.0%
! CAGTTGTGAAAGCACATTGG+TGG + chr8_4:14697845-14697864 None:intergenic 45.0%
CACCAATGTGCTTTCACAAC+TGG - chr8_4:14697843-14697862 Msa1315350:intron 45.0%
! TCCCAGTTGTGAAAGCACAT+TGG + chr8_4:14697848-14697867 None:intergenic 45.0%
GCTTTCACAACTGGGAAAAG+TGG - chr8_4:14697852-14697871 Msa1315350:intron 45.0%
ATGTTCGCGTTGAATCTGAC+TGG - chr8_4:14697877-14697896 Msa1315350:intron 45.0%
ACACCAAACATGAGTCCAGA+GGG - chr8_4:14697919-14697938 Msa1315350:intron 45.0%
AATCCCTCTGGACTCATGTT+TGG + chr8_4:14697925-14697944 None:intergenic 45.0%
AAAGCCAAGACGGTTCAATC+AGG - chr8_4:14698281-14698300 Msa1315350:intron 45.0%
CATACTGTGCAACATTGGTG+CGG + chr8_4:14698340-14698359 None:intergenic 45.0%
TGCAGAACCCCCATATTGAA+AGG + chr8_4:14698492-14698511 None:intergenic 45.0%
!!! AAGAGTGCTCCTTTTACGAG+AGG + chr8_4:14699036-14699055 None:intergenic 45.0%
GTAGGGTTCGAATAAGCTCT+TGG + chr8_4:14699266-14699285 None:intergenic 45.0%
!!! AGTACTGGTTTTCCCTGTTG+TGG + chr8_4:14699510-14699529 None:intergenic 45.0%
AACAGGGAAAACCAGTACTG+TGG - chr8_4:14699511-14699530 Msa1315350:CDS 45.0%
GAATCAAGCTTCCACAGTAC+TGG + chr8_4:14699525-14699544 None:intergenic 45.0%
TGAACTAAACTCAGAGCTGC+CGG + chr8_4:14699802-14699821 None:intergenic 45.0%
CAGGCAAGTTTATGCAGGAA+TGG - chr8_4:14700445-14700464 Msa1315350:intron 45.0%
AGTTTATGCAGGAATGGGCA+AGG - chr8_4:14700451-14700470 Msa1315350:intron 45.0%
CTGCTCCAATTTCCTTGATG+TGG - chr8_4:14700529-14700548 Msa1315350:intron 45.0%
CCAGTCCACATCAAGGAAAT+TGG + chr8_4:14700537-14700556 None:intergenic 45.0%
CCAATTTCCTTGATGTGGAC+TGG - chr8_4:14700534-14700553 Msa1315350:intron 45.0%
AAGAAAGCCAGTCCACATCA+AGG + chr8_4:14700544-14700563 None:intergenic 45.0%
!!! GAACGCAACTTTTGAGGTTC+AGG + chr8_4:14700830-14700849 None:intergenic 45.0%
GAGGCCTAAAGCAACTTCTT+AGG - chr8_4:14701020-14701039 Msa1315350:CDS 45.0%
! GTGGCCTAAGAAGTTGCTTT+AGG + chr8_4:14701027-14701046 None:intergenic 45.0%
GATGTGGAATTAGGAGGGAA+TGG - chr8_4:14701920-14701939 Msa1315350:CDS 45.0%
ATAGGTCCAGATTCACTTGC+CGG + chr8_4:14702232-14702251 None:intergenic 45.0%
! AACTTGTGCCATTAGGGCAA+GGG + chr8_4:14702507-14702526 None:intergenic 45.0%
! TAACTTGTGCCATTAGGGCA+AGG + chr8_4:14702508-14702527 None:intergenic 45.0%
TCATTGGGCCAAAGCTTATC+TGG - chr8_4:14702884-14702903 Msa1315350:intron 45.0%
CCATGTAGCCAGATAAGCTT+TGG + chr8_4:14702895-14702914 None:intergenic 45.0%
CCAAAGCTTATCTGGCTACA+TGG - chr8_4:14702892-14702911 Msa1315350:intron 45.0%
AAGCAATCCTAGAGGGCTTA+TGG + chr8_4:14703720-14703739 None:intergenic 45.0%
AAGCAAATAGCAGTGGCAGA+AGG - chr8_4:14704129-14704148 Msa1315350:five_prime_UTR 45.0%
GATACTGTACCTAATTGGGG+GGG + chr8_4:14704259-14704278 None:intergenic 45.0%
! AAACCTTAGTTTGGGTCTGG+CGG - chr8_4:14704358-14704377 Msa1315350:five_prime_UTR 45.0%
GATGCACATAAGATGAGGAC+TGG + chr8_4:14704388-14704407 None:intergenic 45.0%
!!! GATTTATTTTTTTTTTTTTA+TGG - chr8_4:14693378-14693397 Msa1315350:intron 5.0%
!!! TATTATTATTATTTTTCAAA+CGG + chr8_4:14694981-14695000 None:intergenic 5.0%
! AGTGCTGCTGGTGTTGAAGT+TGG - chr8_4:14693029-14693048 Msa1315350:intron 50.0%
ATCCATCCAGGTTACCTGCT+TGG - chr8_4:14693533-14693552 Msa1315350:intron 50.0%
TTCAAGCCAAGCAGGTAACC+TGG + chr8_4:14693542-14693561 None:intergenic 50.0%
ACATTGCGCACTTGCGACAA+GGG + chr8_4:14694458-14694477 None:intergenic 50.0%
! ATGCTGAAGCGTCTACAGGA+TGG - chr8_4:14694826-14694845 Msa1315350:intron 50.0%
GCGTCTACAGGATGGAAACT+TGG - chr8_4:14694834-14694853 Msa1315350:intron 50.0%
ATGGAAACTTGGCCACAGGA+GGG - chr8_4:14694845-14694864 Msa1315350:intron 50.0%
TTACCATTGCTAGGCGCTCA+CGG - chr8_4:14696469-14696488 Msa1315350:CDS 50.0%
TCAGTTCTGTGGTGCAGATC+CGG - chr8_4:14696905-14696924 Msa1315350:intron 50.0%
! GGGGTTCAATCCCTCTCTTT+TGG - chr8_4:14696926-14696945 Msa1315350:intron 50.0%
GCTTCCTGAGACCAAAAGAG+AGG + chr8_4:14696940-14696959 None:intergenic 50.0%
!! GGACTCATGTTTGGTGTCAC+TGG + chr8_4:14697916-14697935 None:intergenic 50.0%
GACACCAAACATGAGTCCAG+AGG - chr8_4:14697918-14697937 Msa1315350:intron 50.0%
CCAATTGTGGTTGCCACAGA+TGG + chr8_4:14698061-14698080 None:intergenic 50.0%
CCATCTGTGGCAACCACAAT+TGG - chr8_4:14698058-14698077 Msa1315350:intron 50.0%
GACGCCAGCTACATGCATTT+GGG - chr8_4:14698381-14698400 Msa1315350:intron 50.0%
ACTTGGCAACCCTTTGGCAA+AGG - chr8_4:14698427-14698446 Msa1315350:intron 50.0%
AAAGGCTAATGTGTCGCCCA+TGG + chr8_4:14698474-14698493 None:intergenic 50.0%
TAGAGGTCAATGGAAGGCAG+CGG - chr8_4:14699233-14699252 Msa1315350:intron 50.0%
TATTTCGATCTGTCCGCAGC+CGG - chr8_4:14699780-14699799 Msa1315350:intron 50.0%
TCAGATGAGTACGGACAGTC+TGG + chr8_4:14700231-14700250 None:intergenic 50.0%
GCTGGAACCGCTTCTCATTT+AGG + chr8_4:14700662-14700681 None:intergenic 50.0%
TCACAGCCAGCACAAGCATT+AGG + chr8_4:14701049-14701068 None:intergenic 50.0%
! ACTGCTGGCTAGGCAACAAA+AGG + chr8_4:14701284-14701303 None:intergenic 50.0%
TTGCCTAGCCAGCAGTACAT+CGG - chr8_4:14701288-14701307 Msa1315350:intron 50.0%
! TAGGGCAAGGGCACATGTTA+AGG + chr8_4:14702495-14702514 None:intergenic 50.0%
AACATGTGCCCTTGCCCTAA+TGG - chr8_4:14702496-14702515 Msa1315350:intron 50.0%
ATGGGTGACTCTTAACACCC+AGG + chr8_4:14702735-14702754 None:intergenic 50.0%
GGGTGTTAAGAGTCACCCAT+TGG - chr8_4:14702735-14702754 Msa1315350:intron 50.0%
CGGGGCATATCTCATCCAAT+GGG + chr8_4:14702753-14702772 None:intergenic 50.0%
TCGGGGCATATCTCATCCAA+TGG + chr8_4:14702754-14702773 None:intergenic 50.0%
!! GCTGGTGTTGAAGTTGGTGC+TGG - chr8_4:14693035-14693054 Msa1315350:intron 55.0%
AGCCAAGCAGGTAACCTGGA+TGG + chr8_4:14693538-14693557 None:intergenic 55.0%
CACATTGCGCACTTGCGACA+AGG + chr8_4:14694459-14694478 None:intergenic 55.0%
CAGGATGGAAACTTGGCCAC+AGG - chr8_4:14694841-14694860 Msa1315350:intron 55.0%
GATGGAAACTTGGCCACAGG+AGG - chr8_4:14694844-14694863 Msa1315350:intron 55.0%
TCCAGGGTTCACATGGGAGA+CGG - chr8_4:14695728-14695747 Msa1315350:intron 55.0%
CAGTTCTGTGGTGCAGATCC+GGG - chr8_4:14696906-14696925 Msa1315350:intron 55.0%
AGTTCTGTGGTGCAGATCCG+GGG - chr8_4:14696907-14696926 Msa1315350:intron 55.0%
GACGCCTGATTGAACCGTCT+TGG + chr8_4:14698288-14698307 None:intergenic 55.0%
CGGTTCAATCAGGCGTCTTG+AGG - chr8_4:14698291-14698310 Msa1315350:intron 55.0%
GCTTATGGACTCGTCGCACT+AGG - chr8_4:14698359-14698378 Msa1315350:intron 55.0%
GGACGCCAGCTACATGCATT+TGG - chr8_4:14698380-14698399 Msa1315350:intron 55.0%
GGGCATTTCCAGCCACAACA+GGG - chr8_4:14699495-14699514 Msa1315350:CDS 55.0%
!! CTGGTTTTCCCTGTTGTGGC+TGG + chr8_4:14699506-14699525 None:intergenic 55.0%
AGGCCACCTAATGCTTGTGC+TGG - chr8_4:14701040-14701059 Msa1315350:CDS 55.0%
CAGCCAGCACAAGCATTAGG+TGG + chr8_4:14701046-14701065 None:intergenic 55.0%
TGCCTAGCCAGCAGTACATC+GGG - chr8_4:14701289-14701308 Msa1315350:intron 55.0%
! TTCCCGATGTACTGCTGGCT+AGG + chr8_4:14701294-14701313 None:intergenic 55.0%
AAGGCTTCCCGATGTACTGC+TGG + chr8_4:14701299-14701318 None:intergenic 55.0%
TTTGTGCCTCCCCCCCAATT+AGG - chr8_4:14704247-14704266 Msa1315350:five_prime_UTR 55.0%
ACTGTACCTAATTGGGGGGG+AGG + chr8_4:14704256-14704275 None:intergenic 55.0%
! CTTAGTTTGGGTCTGGCGGT+CGG - chr8_4:14704362-14704381 Msa1315350:five_prime_UTR 55.0%
! AAGGTGGGGACAAGTGCTGC+TGG - chr8_4:14693017-14693036 Msa1315350:CDS 60.0%
GCGACGTTGCACGTCATGCA+TGG + chr8_4:14694434-14694453 None:intergenic 60.0%
GGGTTCTGCAGCGCACAACA+AGG - chr8_4:14698502-14698521 Msa1315350:CDS 60.0%
! GGGGCATTTCCAGCCACAAC+AGG - chr8_4:14699494-14699513 Msa1315350:CDS 60.0%
! AAACTCAGAGCTGCCGGCTG+CGG + chr8_4:14699796-14699815 None:intergenic 60.0%
!! GAGGTGCCGGCAAGTGAATC+TGG - chr8_4:14702223-14702242 Msa1315350:CDS 60.0%
CGACCGCCAGACCCAAACTA+AGG + chr8_4:14704364-14704383 None:intergenic 60.0%
GCCGTCTCCCATGTGAACCC+TGG + chr8_4:14695732-14695751 None:intergenic 65.0%
GTGCCGTGAGCGCCTAGCAA+TGG + chr8_4:14696475-14696494 None:intergenic 65.0%
AGGCGCTCACGGCACTATGC+TGG - chr8_4:14696480-14696499 Msa1315350:CDS 65.0%
GGCGCTCACGGCACTATGCT+GGG - chr8_4:14696481-14696500 Msa1315350:CDS 65.0%
CACGGCACTATGCTGGGACC+AGG - chr8_4:14696487-14696506 Msa1315350:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 14692539 14704438 14692539 ID=Msa1315350;Name=Msa1315350
chr8_4 mRNA 14692539 14704438 14692539 ID=Msa1315350-mRNA-1;Parent=Msa1315350;Name=Msa1315350-mRNA-1;_AED=0.17;_eAED=0.17;_QI=457|0.81|0.82|1|1|1|17|406|850
chr8_4 exon 14692539 14693037 14692539 ID=Msa1315350-mRNA-1:exon:5589;Parent=Msa1315350-mRNA-1
chr8_4 exon 14694719 14694800 14694719 ID=Msa1315350-mRNA-1:exon:5588;Parent=Msa1315350-mRNA-1
chr8_4 exon 14696377 14696529 14696377 ID=Msa1315350-mRNA-1:exon:5587;Parent=Msa1315350-mRNA-1
chr8_4 exon 14696655 14696825 14696655 ID=Msa1315350-mRNA-1:exon:5586;Parent=Msa1315350-mRNA-1
chr8_4 exon 14697376 14697489 14697376 ID=Msa1315350-mRNA-1:exon:5585;Parent=Msa1315350-mRNA-1
chr8_4 exon 14697637 14697758 14697637 ID=Msa1315350-mRNA-1:exon:5584;Parent=Msa1315350-mRNA-1
chr8_4 exon 14698454 14698823 14698454 ID=Msa1315350-mRNA-1:exon:5583;Parent=Msa1315350-mRNA-1
chr8_4 exon 14699012 14699158 14699012 ID=Msa1315350-mRNA-1:exon:5582;Parent=Msa1315350-mRNA-1
chr8_4 exon 14699265 14699362 14699265 ID=Msa1315350-mRNA-1:exon:5581;Parent=Msa1315350-mRNA-1
chr8_4 exon 14699473 14699570 14699473 ID=Msa1315350-mRNA-1:exon:5580;Parent=Msa1315350-mRNA-1
chr8_4 exon 14699986 14700173 14699986 ID=Msa1315350-mRNA-1:exon:5579;Parent=Msa1315350-mRNA-1
chr8_4 exon 14700469 14700545 14700469 ID=Msa1315350-mRNA-1:exon:5578;Parent=Msa1315350-mRNA-1
chr8_4 exon 14700854 14701079 14700854 ID=Msa1315350-mRNA-1:exon:5577;Parent=Msa1315350-mRNA-1
chr8_4 exon 14701398 14701511 14701398 ID=Msa1315350-mRNA-1:exon:5576;Parent=Msa1315350-mRNA-1
chr8_4 exon 14701774 14701939 14701774 ID=Msa1315350-mRNA-1:exon:5575;Parent=Msa1315350-mRNA-1
chr8_4 exon 14702076 14702280 14702076 ID=Msa1315350-mRNA-1:exon:5574;Parent=Msa1315350-mRNA-1
chr8_4 exon 14703853 14704438 14703853 ID=Msa1315350-mRNA-1:exon:5573;Parent=Msa1315350-mRNA-1
chr8_4 five_prime_UTR 14703982 14704438 14703982 ID=Msa1315350-mRNA-1:five_prime_utr;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14703853 14703981 14703853 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14702076 14702280 14702076 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14701774 14701939 14701774 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14701398 14701511 14701398 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14700854 14701079 14700854 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14700469 14700545 14700469 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14699986 14700173 14699986 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14699473 14699570 14699473 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14699265 14699362 14699265 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14699012 14699158 14699012 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14698454 14698823 14698454 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14697637 14697758 14697637 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14697376 14697489 14697376 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14696655 14696825 14696655 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14696377 14696529 14696377 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14694719 14694800 14694719 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 CDS 14692945 14693037 14692945 ID=Msa1315350-mRNA-1:cds;Parent=Msa1315350-mRNA-1
chr8_4 three_prime_UTR 14692539 14692944 14692539 ID=Msa1315350-mRNA-1:three_prime_utr;Parent=Msa1315350-mRNA-1
Gene Sequence

>Msa1315350

ATGATGGAGATTGAAGAAGAGAAGGTGGGGACAAGTGCTGCTGGTGTTGAAGTTGGTGCTGGTTTTGAAGATGGAGTTGACTCTAAGTTTTGCTACATGCAGAAGTTTAGGCTCTATGAAACTTCTCAGAGATTCTATATGATTGGAAGAGACAAAAACAGAACATTTTGGAAGGTCTTAAAGATTGACAGATTGGATCAGTCTGAGTTAAATATCTCTGAAGATCAAACAAAATACTCAGAAATTGAGTGTTGTGAAATGCTGAAGCGTCTACAGGATGGAAACTTGGCCACAGGAGGGCTTAAATTTGTTACAACTTGCTATGGAATCATCGGGTTTATCAAATTTCTTGAGCCATACTACATGCTGCTTATTACAAAGCGGAGGAAGATCGGCACAATATGTGGACACACTATATATGCTATCACAAAGAGTGAAATGATTCCAATTCCACATTCAAGTGTGCGATCAAATTTGGCATTTTCTAAGGATGAGAACAGTGCGTATGCACAATGTGGGATTCCTCAAGTCAACCCTCTCATCTTTCTGTGGTACTCTCTAATTGTTTCATTTGAGATAGAATTCTTAAAGCTTCTTCTAGATTTCGTAGTCGTATACAAGAAGTTTCTATGCAGTATGGATCTTACAAAGGACTTCTTTTACAGCTACTCATACAACATTATGCTTAGTCTTCAAAAGAACTTATCTGGTCATAATGTCACGGGACAATCACTATATGAAACACTGTTTGTTTGGAACGAGTTCTTAACTCGTGGAATCAGGAATAATCTCCAGAATACTTCCTGGACTGTTGCCTTAGTCTATGGATTTTTTAAACAGGTTAACCTTTCTATATCTGGCCGCAAGTTTGACTTGATTACCATTGCTAGGCGCTCACGGCACTATGCTGGGACCAGGTATTTGAAACGAGGAGTCAATGAAAGGGGTAGAGTAGCAAATGATGTTGAGACAGAGCAGATAGTCTTTGCAGATGCTAGTGATGGATCCCCAATGCAAATCAGTTCTGTGGTGCAGATCCGGGGTTCAATCCCTCTCTTTTGGTCTCAGGAAGCCTCTCCATTGAATATGAAACCTGACATTATATTATTTAAGAAGGATCCAATGTTTGAAGCCACAAGACTTCATTTTGAGAATCTTGTCATGAGATATGGAAACCCAATTATTATACTGAACTTGATTAAGACTCATGAAAAGAAGCCGCGTGAAACTATTCTGCGAACCGAGTTCGCCAATGCTGTTAAGTCTATTAATAAAACTTTGAGTAAGGAGGATTGTCTGAGATTAACAACTTTCAGCAGCAAGGCCACCAATGTGCTTTCACAACTGGGAAAAGTGGCTATGTTCGCGTTGAATCTGACTGGCATTTTCTACTGTCCAGTGACACCAAACATGAGTCCAGAGGGATTATTCCCATATTCCTTTTCTGACAATAACAATGTCATTGATGAATTTCTTGTTGAGCAAGGTACTGTAAAAAAGTATAATGCTGATAAGGAAACAGAAAATGGCAATGGTTATTACAGTTGTGATGGTGAGAACAAAGATTACAGTGTCAAAGCCAAGACGGTTCAATCAGGCGTCTTGAGGACAAATTGCATAGATTGTTTAGACCGCACCAATGTTGCACAGTATGCTTATGGACTCGTCGCACTAGGACGCCAGCTACATGCATTTGGGTTTATTGAATCCCCACATATTAAACTTGGCAACCCTTTGGCAAAGGATTTAATGAAAGTTTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCGCACAACAAGATATTTTCTAGAAGTAGAGGTCAATGGAAGGCAGCGGCACAATCCCAAGAGCTTATTCGAACCCTACAGCGTTATTACAACAATACATATACGGACGGGTTTAAACAAAAAGCAATTAACATATTCTTGGGGCATTTCCAGCCACAACAGGGAAAACCAGTACTGTGGAAGCTTGATTCAGATCAACATTACCTTTTTGGAAGTCATGGTCCAAATTTAGCAGATGGAATTGATGGGTCATTCATTAGAAGATCACAATCCGATGGCAATATTCTCGGTGAAAGTGACTCTACAACTAGGAATATGCATGCTCCAGACTGTCCGTACTCATCTGAAAATCCTGATAAGCAATCTCTTTTGGAGCCTCTATTGAAGTCTACTTGTGGAACTTCTATCTGTCAATGCAGGCAAGTTTATGCAGGAATGGGCAAGGACCAACATTATGAAAACGATCACATTTGTTATGATGAACATGAAGATGCAAATGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGAAAATTCTTGTGAAGAAGAACTACTTGACAGGTCAATCAGCATCTCCTCAGACAATATTGTGAATGAACTAATAACTGAGGTGCCGGCAAGTGAATCTGGACCTATCTTAAAGGAGAGGCAAAGTGAAGAAGAACTTAACAAAAATGGAAAATATACTGAAAGCTTTGAAAATTGGGTTACTCATGGTCAATTGCTTTATGTTTGA

Protein sequence

>Msa1315350

MMEIEEEKVGTSAAGVEVGAGFEDGVDSKFCYMQKFRLYETSQRFYMIGRDKNRTFWKVLKIDRLDQSELNISEDQTKYSEIECCEMLKRLQDGNLATGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAITKSEMIPIPHSSVRSNLAFSKDENSAYAQCGIPQVNPLIFLWYSLIVSFEIEFLKLLLDFVVVYKKFLCSMDLTKDFFYSYSYNIMLSLQKNLSGHNVTGQSLYETLFVWNEFLTRGIRNNLQNTSWTVALVYGFFKQVNLSISGRKFDLITIARRSRHYAGTRYLKRGVNERGRVANDVETEQIVFADASDGSPMQISSVVQIRGSIPLFWSQEASPLNMKPDIILFKKDPMFEATRLHFENLVMRYGNPIIILNLIKTHEKKPRETILRTEFANAVKSINKTLSKEDCLRLTTFSSKATNVLSQLGKVAMFALNLTGIFYCPVTPNMSPEGLFPYSFSDNNNVIDEFLVEQGTVKKYNADKETENGNGYYSCDGENKDYSVKAKTVQSGVLRTNCIDCLDRTNVAQYAYGLVALGRQLHAFGFIESPHIKLGNPLAKDLMKVYESMGDTLAFQYGGSAAHNKIFSRSRGQWKAAAQSQELIRTLQRYYNNTYTDGFKQKAINIFLGHFQPQQGKPVLWKLDSDQHYLFGSHGPNLADGIDGSFIRRSQSDGNILGESDSTTRNMHAPDCPYSSENPDKQSLLEPLLKSTCGTSICQCRQVYAGMGKDQHYENDHICYDEHEDANDCSNFLDVDWLSSSENSCEEELLDRSISISSDNIVNELITEVPASESGPILKERQSEEELNKNGKYTESFENWVTHGQLLYV*