Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276940 | XP_003627412.3 | 91.052 | 827 | 28 | 4 | 1 | 820 | 1 | 788 | 0.0 | 1510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276940 | sp|Q94A27|SAC2_ARATH | 53.799 | 816 | 274 | 11 | 26 | 805 | 12 | 760 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276940 | A0A396GEB7 | 91.041 | 826 | 29 | 4 | 1 | 820 | 1 | 787 | 0.0 | 1509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1234670 | Msa1276940 | 0.971778 | 1.057533e-133 | -8.615850e-47 |
| Msa1276940 | Msa1315350 | 0.955694 | 1.680355e-113 | -8.615850e-47 |
| Msa1174970 | Msa1276940 | 0.930493 | 1.511429e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276940 | MtrunA17_Chr8g0344911 | 91.041 | 826 | 29 | 4 | 1 | 820 | 1 | 787 | 0.0 | 1509 |
| Msa1276940 | MtrunA17_Chr4g0069981 | 57.333 | 825 | 263 | 14 | 28 | 815 | 21 | 793 | 0.0 | 893 |
| Msa1276940 | MtrunA17_Chr4g0014511 | 44.471 | 823 | 350 | 15 | 33 | 804 | 42 | 808 | 0.0 | 645 |
| Msa1276940 | MtrunA17_Chr5g0406801 | 28.155 | 309 | 171 | 9 | 104 | 408 | 63 | 324 | 3.31e-22 | 102 |
| Msa1276940 | MtrunA17_Chr5g0406801 | 37.984 | 129 | 78 | 2 | 531 | 658 | 389 | 516 | 2.72e-14 | 76.6 |
| Msa1276940 | MtrunA17_Chr4g0045791 | 29.231 | 195 | 117 | 5 | 250 | 426 | 179 | 370 | 2.52e-14 | 77.8 |
| Msa1276940 | MtrunA17_Chr7g0242661 | 29.927 | 137 | 94 | 2 | 531 | 666 | 196 | 331 | 3.59e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276940 | AT3G14205.1 | 53.799 | 816 | 274 | 11 | 26 | 805 | 12 | 760 | 0.0 | 822 |
| Msa1276940 | AT5G20840.1 | 51.766 | 821 | 306 | 13 | 33 | 816 | 24 | 791 | 0.0 | 770 |
| Msa1276940 | AT3G43220.1 | 51.171 | 811 | 319 | 12 | 33 | 812 | 15 | 779 | 0.0 | 748 |
| Msa1276940 | AT3G43220.3 | 50.860 | 814 | 312 | 12 | 33 | 812 | 15 | 774 | 0.0 | 745 |
| Msa1276940 | AT3G43220.2 | 56.361 | 676 | 244 | 7 | 33 | 701 | 15 | 646 | 0.0 | 719 |
| Msa1276940 | AT1G22620.1 | 50.522 | 671 | 262 | 10 | 33 | 683 | 34 | 654 | 0.0 | 646 |
| Msa1276940 | AT1G17340.1 | 49.115 | 678 | 274 | 9 | 33 | 702 | 19 | 633 | 0.0 | 616 |
| Msa1276940 | AT3G14205.2 | 53.909 | 614 | 218 | 10 | 228 | 805 | 1 | 585 | 0.0 | 598 |
| Msa1276940 | AT3G51830.1 | 22.664 | 578 | 329 | 18 | 93 | 660 | 50 | 519 | 1.07e-30 | 128 |
| Msa1276940 | AT5G66020.1 | 25.305 | 328 | 186 | 8 | 104 | 424 | 59 | 334 | 5.80e-23 | 104 |
| Msa1276940 | AT5G66020.1 | 37.398 | 123 | 75 | 2 | 531 | 652 | 386 | 507 | 2.34e-13 | 74.3 |
| Msa1276940 | AT3G51460.1 | 26.154 | 325 | 186 | 10 | 104 | 424 | 62 | 336 | 5.61e-22 | 101 |
| Msa1276940 | AT3G51460.1 | 36.585 | 123 | 76 | 2 | 531 | 652 | 388 | 509 | 6.81e-13 | 72.8 |
| Msa1276940 | AT3G59770.1 | 28.718 | 195 | 118 | 5 | 250 | 426 | 181 | 372 | 6.42e-16 | 83.2 |
| Msa1276940 | AT3G59770.3 | 28.718 | 195 | 118 | 5 | 250 | 426 | 181 | 372 | 6.89e-16 | 83.2 |
| Msa1276940 | AT3G59770.4 | 28.402 | 169 | 101 | 4 | 276 | 426 | 3 | 169 | 8.23e-13 | 73.2 |
| Msa1276940 | AT3G59770.2 | 29.530 | 149 | 86 | 3 | 295 | 426 | 1 | 147 | 8.34e-13 | 73.2 |
Find 183 sgRNAs with CRISPR-Local
Find 551 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTCCATCTGCTAAATT+TGG | 0.146934 | 8_3:+11920218 | None:intergenic |
| TTCAAGTGTGCGATCAAATT+TGG | 0.181811 | 8_3:-11924637 | Msa1276940:CDS |
| ATCAAGTTCAGTATAATAAT+TGG | 0.185083 | 8_3:+11922317 | None:intergenic |
| GACACATTAGCCTTTCAATA+TGG | 0.211695 | 8_3:-11921315 | Msa1276940:CDS |
| TGGACTGTTGCCTTAGTCTA+TGG | 0.221556 | 8_3:-11923708 | Msa1276940:CDS |
| TCCAAAAGAGATTGCTTATC+AGG | 0.251218 | 8_3:+11919539 | None:intergenic |
| TCCTGATAAGCAATCTCTTT+TGG | 0.253320 | 8_3:-11919540 | Msa1276940:CDS |
| ACTTACTCAGAAAAGGAATA+TGG | 0.268444 | 8_3:+11921846 | None:intergenic |
| TATATGAAACACTGTTTGTT+TGG | 0.269818 | 8_3:-11923779 | Msa1276940:CDS |
| CCAGTCCACATCAAGGAAAT+TGG | 0.290418 | 8_3:+11919260 | None:intergenic |
| TATTATACTGAACTTGATTA+AGG | 0.305053 | 8_3:-11922312 | Msa1276940:intron |
| GAGAATCTTGTCATGAGATA+TGG | 0.308963 | 8_3:-11922344 | Msa1276940:CDS |
| TTGGACCATGACTTCCAAAA+AGG | 0.315276 | 8_3:+11920237 | None:intergenic |
| AGGCGCTCACGGCACTATGC+TGG | 0.316310 | 8_3:-11923315 | Msa1276940:CDS |
| CACCAATGTGCTTTCACAAC+TGG | 0.330680 | 8_3:-11921952 | Msa1276940:CDS |
| AGTCTTCAAAAGAACTTATC+TGG | 0.334802 | 8_3:-11923825 | Msa1276940:CDS |
| GGGGTTCAATCCCTCTCTTT+TGG | 0.336187 | 8_3:-11922869 | Msa1276940:CDS |
| GGACGCCAGCTACATGCATT+TGG | 0.338791 | 8_3:-11921414 | Msa1276940:CDS |
| TAGGTTAACCTTTCTATATC+TGG | 0.339638 | 8_3:-11923366 | Msa1276940:CDS |
| GCTGATAAGGAAACAGAAAA+TGG | 0.350899 | 8_3:-11921582 | Msa1276940:CDS |
| GTACATTAATATGTGCCCTT+AGG | 0.358497 | 8_3:+11917431 | None:intergenic |
| TCAGTTCTGTGGTGCAGATC+CGG | 0.364139 | 8_3:-11922890 | Msa1276940:CDS |
| TGAATCTGGACCTATCTTAA+AGG | 0.365639 | 8_3:-11917557 | Msa1276940:CDS |
| CGCACACTTGAATGTGGAAT+TGG | 0.369716 | 8_3:+11924648 | None:intergenic |
| CAACAGTCCAGGAAGTATTC+TGG | 0.370306 | 8_3:+11923721 | None:intergenic |
| GAGGTGCCGGCAAGTGAATC+TGG | 0.372008 | 8_3:-11917571 | Msa1276940:CDS |
| CAAGAAGTTTCTATGCAGTA+TGG | 0.374428 | 8_3:-11923895 | Msa1276940:CDS |
| CCAATTTCCTTGATGTGGAC+TGG | 0.383314 | 8_3:-11919260 | Msa1276940:CDS |
| GGGGCATTTCCAGCCACAAC+AGG | 0.392246 | 8_3:-11920300 | Msa1276940:CDS |
| GACGCCAGCTACATGCATTT+GGG | 0.393314 | 8_3:-11921413 | Msa1276940:CDS |
| ACACATTAGCCTTTCAATAT+GGG | 0.394386 | 8_3:-11921314 | Msa1276940:CDS |
| GGTCTTAAAGATTGACAGAT+TGG | 0.396654 | 8_3:-11925055 | Msa1276940:CDS |
| GTAATAAGCAGCATGTAGTA+TGG | 0.398368 | 8_3:+11924738 | None:intergenic |
| AGTTCTTAACTCGTGGAATC+AGG | 0.401648 | 8_3:-11923752 | Msa1276940:CDS |
| GCTCAGAGATTCTATATGAT+TGG | 0.401655 | 8_3:-11925105 | Msa1276940:intron |
| TGTTAGTTCTAGAATCATTA+CGG | 0.409010 | 8_3:-11917523 | Msa1276940:exon |
| CCACAGAACTGATTTGCATT+GGG | 0.409148 | 8_3:+11922901 | None:intergenic |
| TTTGCTACATGCAGAAGTTT+AGG | 0.409804 | 8_3:-11926715 | Msa1276940:CDS |
| TCAAGTTCAGTATAATAATT+GGG | 0.410610 | 8_3:+11922318 | None:intergenic |
| GGACTCATGTTTGGTGTCAC+TGG | 0.418382 | 8_3:+11921882 | None:intergenic |
| GCTGGTGTTGAAGTTGGTGC+TGG | 0.420803 | 8_3:-11926764 | Msa1276940:CDS |
| TTAATATTTCCTAACTGAAA+AGG | 0.421064 | 8_3:+11917487 | None:intergenic |
| CAGTTCTGTGGTGCAGATCC+GGG | 0.421189 | 8_3:-11922889 | Msa1276940:CDS |
| AATCCCTCTGGACTCATGTT+TGG | 0.422679 | 8_3:+11921873 | None:intergenic |
| TATTAATAAAACTTTGAGTA+AGG | 0.424613 | 8_3:-11922118 | Msa1276940:CDS |
| AATTTAGCAGATGGAATTGA+TGG | 0.425095 | 8_3:-11920215 | Msa1276940:CDS |
| TCAGATGAGTACGGACAGTC+TGG | 0.425148 | 8_3:+11919566 | None:intergenic |
| ATAATCTCCAGAATACTTCC+TGG | 0.425618 | 8_3:-11923728 | Msa1276940:CDS |
| ATGTCAGGTTTCATATTCAA+TGG | 0.429541 | 8_3:+11922831 | None:intergenic |
| ATAGGTCCAGATTCACTTGC+CGG | 0.430491 | 8_3:+11917565 | None:intergenic |
| TACATTAATATGTGCCCTTA+GGG | 0.432282 | 8_3:+11917432 | None:intergenic |
| TTATTACAACAATACATATA+CGG | 0.440751 | 8_3:-11920504 | Msa1276940:CDS |
| AGCTCAAAACTTTACATCAA+TGG | 0.447201 | 8_3:+11926991 | None:intergenic |
| GAATCAAGCTTCCACAGTAC+TGG | 0.448668 | 8_3:+11920272 | None:intergenic |
| AATGTTGCACAGTATGCTTA+TGG | 0.455792 | 8_3:-11921450 | Msa1276940:CDS |
| TATTAAACTTGGCAACCCTT+TGG | 0.458278 | 8_3:-11921373 | Msa1276940:CDS |
| CTTACTCAGAAAAGGAATAT+GGG | 0.464241 | 8_3:+11921847 | None:intergenic |
| AATGAAAGTTTATGAGTCCA+TGG | 0.465884 | 8_3:-11921340 | Msa1276940:CDS |
| CAATCCGATGGCAATATTCT+CGG | 0.471072 | 8_3:-11919623 | Msa1276940:CDS |
| TTATGGTACTTACTCAGAAA+AGG | 0.471405 | 8_3:+11921839 | None:intergenic |
| CAGGCAAGTTTATGCAGGAA+TGG | 0.478598 | 8_3:-11919349 | Msa1276940:CDS |
| AAATTTGTTACAACTTGCTA+TGG | 0.480675 | 8_3:-11924925 | Msa1276940:CDS |
| TAGGCTCTATGAAACTTCTC+AGG | 0.480764 | 8_3:-11926696 | Msa1276940:intron |
| TTTCTAGAAGTAGAGGTCAA+TGG | 0.482402 | 8_3:-11920571 | Msa1276940:CDS |
| TATTGTTGTAATAACGCTGT+AGG | 0.483851 | 8_3:+11920513 | None:intergenic |
| ATTAATAGACTTAACAGCAT+TGG | 0.484492 | 8_3:+11922134 | None:intergenic |
| GTAGGGTTCGAATAAGCTCT+TGG | 0.486430 | 8_3:+11920531 | None:intergenic |
| GAATCCCCACATATTAAACT+TGG | 0.486919 | 8_3:-11921384 | Msa1276940:CDS |
| TTCATTAAATCCTTTGCCAA+AGG | 0.487276 | 8_3:+11921357 | None:intergenic |
| ACCAATGTGCTTTCACAACT+GGG | 0.489522 | 8_3:-11921951 | Msa1276940:CDS |
| ACCACAGAACTGATTTGCAT+TGG | 0.490668 | 8_3:+11922900 | None:intergenic |
| AAAGCCAAGACGGTTCAATC+AGG | 0.493324 | 8_3:-11921513 | Msa1276940:CDS |
| AGGAAGATCGGCACAATATG+TGG | 0.493549 | 8_3:-11924708 | Msa1276940:CDS |
| TCATTAAATCCTTTGCCAAA+GGG | 0.496371 | 8_3:+11921358 | None:intergenic |
| AGTCTTGTGGCTTCAAACAT+TGG | 0.496716 | 8_3:+11922374 | None:intergenic |
| CTTAACAGCATTGGCGAACT+CGG | 0.498542 | 8_3:+11922143 | None:intergenic |
| TATATACTGACCTTTAAGAT+AGG | 0.502188 | 8_3:+11917547 | None:intergenic |
| ATATTAATGAGTTATAGTTA+AGG | 0.503200 | 8_3:-11917471 | Msa1276940:three_prime_UTR |
| AGGCAAGTTTATGCAGGAAT+GGG | 0.504128 | 8_3:-11919348 | Msa1276940:CDS |
| GAAACGAGGAGTCAATGAAA+GGG | 0.506357 | 8_3:-11922985 | Msa1276940:CDS |
| TATATCGTACATATAATGTC+AGG | 0.506653 | 8_3:+11922816 | None:intergenic |
| CACATTAGCCTTTCAATATG+GGG | 0.510110 | 8_3:-11921313 | Msa1276940:CDS |
| GAATATGGGAATAATCCCTC+TGG | 0.512618 | 8_3:+11921861 | None:intergenic |
| AAATGCTAACATGTGCCCTA+AGG | 0.516126 | 8_3:-11917447 | Msa1276940:three_prime_UTR |
| GGAGATTGAAGAAGAGAAGG+TGG | 0.516279 | 8_3:-11926798 | Msa1276940:CDS |
| GCTTATGGACTCGTCGCACT+AGG | 0.517099 | 8_3:-11921435 | Msa1276940:CDS |
| CTGCTCCAATTTCCTTGATG+TGG | 0.517591 | 8_3:-11919265 | Msa1276940:CDS |
| TAGGGTTCGAATAAGCTCTT+GGG | 0.519595 | 8_3:+11920532 | None:intergenic |
| GAGATTGAAGAAGAGAAGGT+GGG | 0.520849 | 8_3:-11926797 | Msa1276940:CDS |
| CCACAAGTAGACTTCAATAG+AGG | 0.523606 | 8_3:+11919515 | None:intergenic |
| TAATAAAACTTTGAGTAAGG+AGG | 0.524239 | 8_3:-11922115 | Msa1276940:CDS |
| TAAACCCAAATGCATGTAGC+TGG | 0.525363 | 8_3:+11921409 | None:intergenic |
| GGGTTGCCAAGTTTAATATG+TGG | 0.528032 | 8_3:+11921378 | None:intergenic |
| TACAACAATACATATACGGA+CGG | 0.528782 | 8_3:-11920500 | Msa1276940:CDS |
| ATTACAAAGCGGAGGAAGAT+CGG | 0.531117 | 8_3:-11924720 | Msa1276940:CDS |
| ACTTGGCAACCCTTTGGCAA+AGG | 0.532622 | 8_3:-11921367 | Msa1276940:CDS |
| CAGTTGTGAAAGCACATTGG+TGG | 0.534453 | 8_3:+11921953 | None:intergenic |
| TTCATTCACAATATTGTCTG+AGG | 0.534573 | 8_3:+11917603 | None:intergenic |
| TTATACAGGCAAGTTTATGC+AGG | 0.534777 | 8_3:-11919354 | Msa1276940:intron |
| TGAAATGCTGAAGCGTCTAC+AGG | 0.535888 | 8_3:-11924974 | Msa1276940:CDS |
| GCGTCTACAGGATGGAAACT+TGG | 0.538498 | 8_3:-11924962 | Msa1276940:CDS |
| GTGAAGAAGAACTACTTGAC+AGG | 0.539008 | 8_3:-11919215 | Msa1276940:intron |
| TGAACTAATAACTGAGGTGC+CGG | 0.541042 | 8_3:-11917584 | Msa1276940:CDS |
| CATGGTCCAAATTTAGCAGA+TGG | 0.542233 | 8_3:-11920224 | Msa1276940:CDS |
| GGTTGCCAAGTTTAATATGT+GGG | 0.543042 | 8_3:+11921379 | None:intergenic |
| AGTGCTGCTGGTGTTGAAGT+TGG | 0.547360 | 8_3:-11926770 | Msa1276940:CDS |
| ATAGACTAAGGCAACAGTCC+AGG | 0.549517 | 8_3:+11923710 | None:intergenic |
| GATGGAGATTGAAGAAGAGA+AGG | 0.551345 | 8_3:-11926801 | Msa1276940:CDS |
| GTCTTTGCAGATGCTAGTGA+TGG | 0.554035 | 8_3:-11922927 | Msa1276940:CDS |
| TTGACTTGATTACCATTGCT+AGG | 0.555440 | 8_3:-11923335 | Msa1276940:CDS |
| TGAAACGAGGAGTCAATGAA+AGG | 0.555782 | 8_3:-11922986 | Msa1276940:CDS |
| ATGAAAGTTTATGAGTCCAT+GGG | 0.555783 | 8_3:-11921339 | Msa1276940:CDS |
| AGGGATCTGAATTGTGATGA+TGG | 0.556554 | 8_3:-11926819 | Msa1276940:exon |
| GCTTTCACAACTGGGAAAAG+TGG | 0.557872 | 8_3:-11921943 | Msa1276940:CDS |
| AGATTGAAGAAGAGAAGGTG+GGG | 0.558991 | 8_3:-11926796 | Msa1276940:CDS |
| GATGAATTTCTTGTTGAGCA+AGG | 0.559740 | 8_3:-11921624 | Msa1276940:CDS |
| ATTCTCAAAATGAAGTCTTG+TGG | 0.560519 | 8_3:+11922361 | None:intergenic |
| TTTGATCGCACACTTGAATG+TGG | 0.561611 | 8_3:+11924642 | None:intergenic |
| ACTTGCGGCCAGATATAGAA+AGG | 0.562076 | 8_3:+11923358 | None:intergenic |
| ATTGTTGTAATAACGCTGTA+GGG | 0.562688 | 8_3:+11920514 | None:intergenic |
| GAACTTCTATCTGTCAATGC+AGG | 0.564220 | 8_3:-11919493 | Msa1276940:intron |
| AAAGGCTAATGTGTCGCCCA+TGG | 0.569063 | 8_3:+11921323 | None:intergenic |
| AAGGTGGGGACAAGTGCTGC+TGG | 0.571459 | 8_3:-11926782 | Msa1276940:CDS |
| GTGCCGTGAGCGCCTAGCAA+TGG | 0.576081 | 8_3:+11923323 | None:intergenic |
| AATGCTAACATGTGCCCTAA+GGG | 0.576467 | 8_3:-11917446 | Msa1276940:three_prime_UTR |
| AGGTTTCATATTCAATGGAG+AGG | 0.578082 | 8_3:+11922836 | None:intergenic |
| ATAAGCATACTGTGCAACAT+TGG | 0.579135 | 8_3:+11921452 | None:intergenic |
| ACAACAATACATATACGGAC+GGG | 0.579913 | 8_3:-11920499 | Msa1276940:CDS |
| AAGAAAGCCAGTCCACATCA+AGG | 0.580107 | 8_3:+11919253 | None:intergenic |
| ACAACTTGCTATGGAATCAT+CGG | 0.580415 | 8_3:-11924916 | Msa1276940:intron |
| CGGTTCAATCAGGCGTCTTG+AGG | 0.583992 | 8_3:-11921503 | Msa1276940:CDS |
| TTATCTGGTCATAATGTCAC+GGG | 0.584534 | 8_3:-11923810 | Msa1276940:CDS |
| TTCACCGAGAATATTGCCAT+CGG | 0.585090 | 8_3:+11919619 | None:intergenic |
| ATTAACAACTTTCAGCAGCA+AGG | 0.585777 | 8_3:-11921976 | Msa1276940:CDS |
| CACAGAACTGATTTGCATTG+GGG | 0.592102 | 8_3:+11922902 | None:intergenic |
| TGGAACGAGTTCTTAACTCG+TGG | 0.592450 | 8_3:-11923759 | Msa1276940:CDS |
| ATGCTGAAGCGTCTACAGGA+TGG | 0.593299 | 8_3:-11924970 | Msa1276940:CDS |
| TTCAGTGCGTATGCACAATG+TGG | 0.593906 | 8_3:-11924335 | Msa1276940:intron |
| AAGATGAGAGGGTTGACTTG+AGG | 0.597280 | 8_3:+11924308 | None:intergenic |
| CTTATCTGGTCATAATGTCA+CGG | 0.598724 | 8_3:-11923811 | Msa1276940:CDS |
| CAGGATGGAAACTTGGCCAC+AGG | 0.599825 | 8_3:-11924955 | Msa1276940:CDS |
| GAGTACCACAGAAAGATGAG+AGG | 0.604000 | 8_3:+11924296 | None:intergenic |
| ATGTTCGCGTTGAATCTGAC+TGG | 0.605772 | 8_3:-11921918 | Msa1276940:CDS |
| GATGGAAACTTGGCCACAGG+AGG | 0.606318 | 8_3:-11924952 | Msa1276940:CDS |
| GTTGCCAAGTTTAATATGTG+GGG | 0.606826 | 8_3:+11921380 | None:intergenic |
| AACAAATTTAAGCCCTCCTG+TGG | 0.608055 | 8_3:+11924939 | None:intergenic |
| ATTTAGCAGATGGAATTGAT+GGG | 0.608558 | 8_3:-11920214 | Msa1276940:intron |
| CCTCTATTGAAGTCTACTTG+TGG | 0.609343 | 8_3:-11919515 | Msa1276940:CDS |
| TAGAGGTCAATGGAAGGCAG+CGG | 0.610698 | 8_3:-11920561 | Msa1276940:CDS |
| CCCAATGCAAATCAGTTCTG+TGG | 0.613475 | 8_3:-11922901 | Msa1276940:CDS |
| ACATTAGCCTTTCAATATGG+GGG | 0.616794 | 8_3:-11921312 | Msa1276940:CDS |
| AGTACCACAGAAAGATGAGA+GGG | 0.619650 | 8_3:+11924297 | None:intergenic |
| AAAAGAGAGGGATTGAACCC+CGG | 0.619852 | 8_3:+11922871 | None:intergenic |
| AAGGAAACAGAAAATGGCAA+TGG | 0.620301 | 8_3:-11921576 | Msa1276940:CDS |
| TCCCAGTTGTGAAAGCACAT+TGG | 0.620901 | 8_3:+11921950 | None:intergenic |
| AGTTTATGCAGGAATGGGCA+AGG | 0.620967 | 8_3:-11919343 | Msa1276940:CDS |
| AGTTCTGTGGTGCAGATCCG+GGG | 0.622116 | 8_3:-11922888 | Msa1276940:CDS |
| AATGGTTATTACAGTGGTGA+TGG | 0.624797 | 8_3:-11921558 | Msa1276940:CDS |
| GTGAAAGTGACTCTACAACT+AGG | 0.625184 | 8_3:-11919601 | Msa1276940:CDS |
| CTTCCTGAGACCAAAAGAGA+GGG | 0.626552 | 8_3:+11922859 | None:intergenic |
| TAGAAGTAGAGGTCAATGGA+AGG | 0.628077 | 8_3:-11920567 | Msa1276940:CDS |
| TCAGTGCGTATGCACAATGT+GGG | 0.628859 | 8_3:-11924334 | Msa1276940:intron |
| GCTTCCTGAGACCAAAAGAG+AGG | 0.637321 | 8_3:+11922858 | None:intergenic |
| ACACCAAACATGAGTCCAGA+GGG | 0.639541 | 8_3:-11921876 | Msa1276940:CDS |
| TGGTGCAGGTATTTGAAACG+AGG | 0.645473 | 8_3:-11922999 | Msa1276940:intron |
| AATGGCAATGGTTATTACAG+TGG | 0.647267 | 8_3:-11921564 | Msa1276940:CDS |
| ATTAGAAGATCACAATCCGA+TGG | 0.647469 | 8_3:-11919635 | Msa1276940:CDS |
| GGGTTCTGCAGCGCACAACA+AGG | 0.652377 | 8_3:-11921292 | Msa1276940:intron |
| ATGCAGTATGGATCTTACAA+AGG | 0.656804 | 8_3:-11923883 | Msa1276940:CDS |
| TCAACCCTCTCATCTTTCTG+TGG | 0.657917 | 8_3:-11924301 | Msa1276940:CDS |
| ATGGAAACTTGGCCACAGGA+GGG | 0.658115 | 8_3:-11924951 | Msa1276940:CDS |
| GGGCATTTCCAGCCACAACA+GGG | 0.658755 | 8_3:-11920299 | Msa1276940:CDS |
| TGGTAATCAAGTCAAACTTG+CGG | 0.663201 | 8_3:+11923343 | None:intergenic |
| AACAGGGAAAACCAGTACTG+TGG | 0.673122 | 8_3:-11920283 | Msa1276940:CDS |
| AAACGAGGAGTCAATGAAAG+GGG | 0.678363 | 8_3:-11922984 | Msa1276940:CDS |
| TGAGTAAGGAGGATTGTCTG+AGG | 0.680809 | 8_3:-11922104 | Msa1276940:intron |
| TGCTGCTTATTACAAAGCGG+AGG | 0.690628 | 8_3:-11924728 | Msa1276940:CDS |
| TTACAGTGTCAAAGCCAAGA+CGG | 0.700662 | 8_3:-11921523 | Msa1276940:CDS |
| GACACCAAACATGAGTCCAG+AGG | 0.705411 | 8_3:-11921877 | Msa1276940:CDS |
| CATACTGTGCAACATTGGTG+CGG | 0.714917 | 8_3:+11921457 | None:intergenic |
| GTTCGCAGAATAGTTTCACG+CGG | 0.715239 | 8_3:+11922165 | None:intergenic |
| ACATGCTGCTTATTACAAAG+CGG | 0.716900 | 8_3:-11924731 | Msa1276940:CDS |
| TGTGAATGAACTAATAACTG+AGG | 0.731433 | 8_3:-11917590 | Msa1276940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACATTTTTTTTTTTTTATG+TGG | - | chr8_3:11917412-11917431 | Msa1276940:three_prime_UTR | 10.0% |
| !!! | TTTTTTATGTTAACTTAAAT+AGG | - | chr8_3:11919400-11919419 | Msa1276940:intron | 10.0% |
| !! | AAAAAAAAAATTAGAAGAAT+CGG | + | chr8_3:11921001-11921020 | None:intergenic | 10.0% |
| !! | AAAAGATAAAAGAATATAAA+AGG | + | chr8_3:11922454-11922473 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAACATTATGTG+TGG | - | chr8_3:11917648-11917667 | Msa1276940:intron | 15.0% |
| !!! | TTTTTATTGTACTTGTTTTT+GGG | - | chr8_3:11917694-11917713 | Msa1276940:intron | 15.0% |
| !!! | TTGTTTTTGTGTTTTATTTT+TGG | - | chr8_3:11918129-11918148 | Msa1276940:intron | 15.0% |
| !! | TTTGTTTAATTATTCATTCA+TGG | - | chr8_3:11918176-11918195 | Msa1276940:intron | 15.0% |
| !! | ATCTTTATAAATGAGAAATA+TGG | - | chr8_3:11918956-11918975 | Msa1276940:intron | 15.0% |
| !!! | ATTGTTATTGTTATGAATTA+CGG | - | chr8_3:11920171-11920190 | Msa1276940:intron | 15.0% |
| !!! | TTCGTTTTTTAATATACATT+TGG | - | chr8_3:11920625-11920644 | Msa1276940:intron | 15.0% |
| !! | TTAATATAAAAATACCAGTA+AGG | + | chr8_3:11921559-11921578 | None:intergenic | 15.0% |
| !! | TATTAATAAAACTTTGAGTA+AGG | - | chr8_3:11922545-11922564 | Msa1276940:intron | 15.0% |
| !!! | TGATTTTTATTTTTTTGGAA+TGG | - | chr8_3:11923417-11923436 | Msa1276940:intron | 15.0% |
| !!! | TTATTTTAACGATCTATTTT+AGG | - | chr8_3:11923544-11923563 | Msa1276940:intron | 15.0% |
| !!! | TGCTTATTTTCAATTATTTA+TGG | - | chr8_3:11923597-11923616 | Msa1276940:intron | 15.0% |
| !! | AAATTGATATCGATAAATAA+AGG | + | chr8_3:11923826-11923845 | None:intergenic | 15.0% |
| !! | TTATTACAACAATACATATA+CGG | - | chr8_3:11924159-11924178 | Msa1276940:intron | 15.0% |
| !! | TGTAATATTAATTACACAAA+AGG | + | chr8_3:11924228-11924247 | None:intergenic | 15.0% |
| !!! | TTTCTTTTAAGAAATTGTTT+TGG | - | chr8_3:11924508-11924527 | Msa1276940:intron | 15.0% |
| !!! | AAAAATGTTATTTCTTTGTT+TGG | - | chr8_3:11924995-11925014 | Msa1276940:CDS | 15.0% |
| !! | TTAAATGTAAAATACCAAAA+TGG | - | chr8_3:11925577-11925596 | Msa1276940:intron | 15.0% |
| !!! | ATTTGACTTTATTTTATCAT+TGG | - | chr8_3:11926398-11926417 | Msa1276940:intron | 15.0% |
| !!! | TTTATCATTTGTTATAGAAA+TGG | - | chr8_3:11926617-11926636 | Msa1276940:intron | 15.0% |
| !! | TTACAAAAAAATTGTCAAAA+TGG | + | chr8_3:11926721-11926740 | None:intergenic | 15.0% |
| !! | TTTGATCCAATATAATTATT+TGG | - | chr8_3:11926859-11926878 | Msa1276940:five_prime_UTR | 15.0% |
| !! | ATATTAATGAGTTATAGTTA+AGG | - | chr8_3:11927192-11927211 | Msa1276940:five_prime_UTR | 15.0% |
| !!! | GAAAAAAAGTAGCTTTTTTA+AGG | + | chr8_3:11917568-11917587 | None:intergenic | 20.0% |
| !!! | CTTTTTATTGTACTTGTTTT+TGG | - | chr8_3:11917693-11917712 | Msa1276940:intron | 20.0% |
| !!! | ACATGAATTGTTTTTTAATG+AGG | - | chr8_3:11918278-11918297 | Msa1276940:intron | 20.0% |
| !!! | GTTTTTGAATTCTGTTTAAT+TGG | - | chr8_3:11918344-11918363 | Msa1276940:intron | 20.0% |
| !!! | AACGTTTTTTTTTTCCTAAA+AGG | - | chr8_3:11919020-11919039 | Msa1276940:intron | 20.0% |
| !! | CTTATCATTATATTATCTGT+GGG | + | chr8_3:11919227-11919246 | None:intergenic | 20.0% |
| !!! | AAAGTTTTACTATGATATAG+AGG | + | chr8_3:11919783-11919802 | None:intergenic | 20.0% |
| !!! | TATGGTATCTCTTTTTATTT+AGG | - | chr8_3:11919883-11919902 | Msa1276940:intron | 20.0% |
| !!! | ATGGTATCTCTTTTTATTTA+GGG | - | chr8_3:11919884-11919903 | Msa1276940:intron | 20.0% |
| !! | ACAATAACAATTAAGTACAA+TGG | + | chr8_3:11920162-11920181 | None:intergenic | 20.0% |
| !!! | TTATGAATTACGGTTTTTAT+CGG | - | chr8_3:11920181-11920200 | Msa1276940:intron | 20.0% |
| !! | TACAAAGAAAAACTAAAATG+TGG | + | chr8_3:11920274-11920293 | None:intergenic | 20.0% |
| !!! | TTTATCGTAAGTTCATTTTA+CGG | - | chr8_3:11920504-11920523 | Msa1276940:CDS | 20.0% |
| !! | TTTAAAAAATCCATAGACTA+AGG | + | chr8_3:11920968-11920987 | None:intergenic | 20.0% |
| !!! | TATATTTCTACACATATTCA+AGG | - | chr8_3:11921628-11921647 | Msa1276940:CDS | 20.0% |
| !! | TTATATAAACAGCTTATCTT+AGG | + | chr8_3:11921934-11921953 | None:intergenic | 20.0% |
| !! | AAGATAAAATAAAGTCAAAC+TGG | - | chr8_3:11921957-11921976 | Msa1276940:CDS | 20.0% |
| !! | CAGTCTAAATAACATAATAT+GGG | + | chr8_3:11922227-11922246 | None:intergenic | 20.0% |
| !! | TCAGTCTAAATAACATAATA+TGG | + | chr8_3:11922228-11922247 | None:intergenic | 20.0% |
| !! | TCAAGTTCAGTATAATAATT+GGG | + | chr8_3:11922348-11922367 | None:intergenic | 20.0% |
| !! | ATCAAGTTCAGTATAATAAT+TGG | + | chr8_3:11922349-11922368 | None:intergenic | 20.0% |
| !! | TATTATACTGAACTTGATTA+AGG | - | chr8_3:11922351-11922370 | Msa1276940:CDS | 20.0% |
| !! | AAAACTTATCAGAAAATGTT+AGG | + | chr8_3:11922973-11922992 | None:intergenic | 20.0% |
| !!! | AAAAAAGTATAATGCTGATA+AGG | - | chr8_3:11923068-11923087 | Msa1276940:intron | 20.0% |
| !!! | GGGTTTGATTTTTATTTTTT+TGG | - | chr8_3:11923412-11923431 | Msa1276940:intron | 20.0% |
| !! | GTTTCTATAATATATTCAAC+AGG | - | chr8_3:11923948-11923967 | Msa1276940:intron | 20.0% |
| !!! | TTACATTTTCTCATTTTACT+TGG | - | chr8_3:11924018-11924037 | Msa1276940:intron | 20.0% |
| !! | AAAATAATATCAAACAAGAG+AGG | + | chr8_3:11924331-11924350 | None:intergenic | 20.0% |
| !!! | TATTATTTTGTTCAGATTCT+TGG | - | chr8_3:11924342-11924361 | Msa1276940:intron | 20.0% |
| !!! | ATTATTTTGTTCAGATTCTT+GGG | - | chr8_3:11924343-11924362 | Msa1276940:intron | 20.0% |
| !!! | TTTTAAGAAATTGTTTTGGA+GGG | - | chr8_3:11924512-11924531 | Msa1276940:intron | 20.0% |
| !! | CTTGAAAATAAAATATTCAC+AGG | + | chr8_3:11924570-11924589 | None:intergenic | 20.0% |
| !! | AAATAATTACATTAGTTGTG+CGG | - | chr8_3:11925775-11925794 | Msa1276940:intron | 20.0% |
| !!! | TTGTTTCACCTAATATTTTT+CGG | - | chr8_3:11925867-11925886 | Msa1276940:intron | 20.0% |
| !!! | AATAGCTTGAATTTTGTATT+TGG | - | chr8_3:11926076-11926095 | Msa1276940:intron | 20.0% |
| !! | AGCTTATAACTTATATGAAA+TGG | - | chr8_3:11926569-11926588 | Msa1276940:intron | 20.0% |
| !!! | AAAAATTGTCAAAATGGATT+AGG | + | chr8_3:11926715-11926734 | None:intergenic | 20.0% |
| !! | CCTTAACCAAATAATTATAT+TGG | + | chr8_3:11926868-11926887 | None:intergenic | 20.0% |
| !! | CCAATATAATTATTTGGTTA+AGG | - | chr8_3:11926865-11926884 | Msa1276940:five_prime_UTR | 20.0% |
| !! | TTAATATTTCCTAACTGAAA+AGG | + | chr8_3:11927179-11927198 | None:intergenic | 20.0% |
| ! | TTTAGGAAATGGAAAAAAAC+AGG | + | chr8_3:11917524-11917543 | None:intergenic | 25.0% |
| !!! | TTTTTTAAGGAATCAGAAGA+AGG | + | chr8_3:11917555-11917574 | None:intergenic | 25.0% |
| !!! | CTGTTGTTAATTTTTTCTGT+TGG | - | chr8_3:11917772-11917791 | Msa1276940:intron | 25.0% |
| ! | GAAAGATTATAATCCATTTG+TGG | - | chr8_3:11918422-11918441 | Msa1276940:intron | 25.0% |
| !! | TCAAATGATTTTGCAGAAAA+TGG | - | chr8_3:11918494-11918513 | Msa1276940:intron | 25.0% |
| !! | AAAGTAATAGCTATCCTTTT+AGG | + | chr8_3:11919037-11919056 | None:intergenic | 25.0% |
| ! | GCTTATCATTATATTATCTG+TGG | + | chr8_3:11919228-11919247 | None:intergenic | 25.0% |
| !! | ATAATGATAAGCTGTTGATT+TGG | - | chr8_3:11919236-11919255 | Msa1276940:CDS | 25.0% |
| !! | TTTGGAAAGACATTTAAGTT+TGG | - | chr8_3:11919254-11919273 | Msa1276940:CDS | 25.0% |
| !!! | AAATTTGTTACAACTTGCTA+TGG | - | chr8_3:11919738-11919757 | Msa1276940:intron | 25.0% |
| ! | TTTACTATGATATAGAGGAT+AGG | + | chr8_3:11919778-11919797 | None:intergenic | 25.0% |
| ! | ATAATAACTCAACTGTCTTA+TGG | - | chr8_3:11919865-11919884 | Msa1276940:intron | 25.0% |
| !! | ATCAAATTTGGCATTTTCTA+AGG | - | chr8_3:11920038-11920057 | Msa1276940:intron | 25.0% |
| ! | ATGAACTTATGAAAACAACA+AGG | + | chr8_3:11920484-11920503 | None:intergenic | 25.0% |
| ! | GTAACTATTTGAGTAAAACA+AGG | - | chr8_3:11920568-11920587 | Msa1276940:CDS | 25.0% |
| ! | ATACATTTGGTTAGAGTTAT+TGG | - | chr8_3:11920638-11920657 | Msa1276940:intron | 25.0% |
| ! | AGATGGTCTATATTAAATGA+AGG | + | chr8_3:11920706-11920725 | None:intergenic | 25.0% |
| ! | TATATGAAACACTGTTTGTT+TGG | - | chr8_3:11920884-11920903 | Msa1276940:intron | 25.0% |
| !!! | AGTCTATGGATTTTTTAAAC+AGG | - | chr8_3:11920969-11920988 | Msa1276940:intron | 25.0% |
| ! | TTGTGTGAAGTTAATTAGTA+CGG | - | chr8_3:11921020-11921039 | Msa1276940:intron | 25.0% |
| ! | TCTAATAAACACATATCACT+AGG | + | chr8_3:11921226-11921245 | None:intergenic | 25.0% |
| !! | TAAAAAGAAAAGTACAAACC+TGG | + | chr8_3:11921376-11921395 | None:intergenic | 25.0% |
| ! | GTGATATATGAAATTAATCC+AGG | + | chr8_3:11921469-11921488 | None:intergenic | 25.0% |
| ! | ATAAAAATACCAGTAAGGAA+TGG | + | chr8_3:11921554-11921573 | None:intergenic | 25.0% |
| !!! | ATACATAAGAGAAGGTATTA+TGG | + | chr8_3:11921589-11921608 | None:intergenic | 25.0% |
| !!! | TTCAAGGTTTCTTTATTTTG+TGG | - | chr8_3:11921644-11921663 | Msa1276940:intron | 25.0% |
| ! | TATATCGTACATATAATGTC+AGG | + | chr8_3:11921850-11921869 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr8_3:11922033-11922052 | Msa1276940:intron | 25.0% |
| ! | AATAAGCTGCAAAAAACTTA+TGG | - | chr8_3:11922103-11922122 | Msa1276940:intron | 25.0% |
| ! | CTTCTTAAATACTAGAGAAA+AGG | + | chr8_3:11922266-11922285 | None:intergenic | 25.0% |
| !! | CTTTTCTCTAGTATTTAAGA+AGG | - | chr8_3:11922264-11922283 | Msa1276940:intron | 25.0% |
| ! | ATTAATAGACTTAACAGCAT+TGG | + | chr8_3:11922532-11922551 | None:intergenic | 25.0% |
| ! | TAATAAAACTTTGAGTAAGG+AGG | - | chr8_3:11922548-11922567 | Msa1276940:intron | 25.0% |
| !!! | GGTAAATTTCTCTTCTTTTT+TGG | - | chr8_3:11922616-11922635 | Msa1276940:intron | 25.0% |
| ! | AATAATGTCAAAATAACACC+CGG | + | chr8_3:11922665-11922684 | None:intergenic | 25.0% |
| !!! | AAGTTGATTTGGTATTTGAA+AGG | - | chr8_3:11923572-11923591 | Msa1276940:intron | 25.0% |
| !!! | AGTTGATTTGGTATTTGAAA+GGG | - | chr8_3:11923573-11923592 | Msa1276940:intron | 25.0% |
| ! | ATCTACATGTAACAAAACAA+AGG | + | chr8_3:11923706-11923725 | None:intergenic | 25.0% |
| ! | AAATTCAGGGAAAATTATGA+TGG | + | chr8_3:11923986-11924005 | None:intergenic | 25.0% |
| ! | AATTTCCACTTCAAAATTCA+GGG | + | chr8_3:11923999-11924018 | None:intergenic | 25.0% |
| ! | AAATTTCCACTTCAAAATTC+AGG | + | chr8_3:11924000-11924019 | None:intergenic | 25.0% |
| !! | TCATTACAGTTCATTCTTTT+GGG | - | chr8_3:11924051-11924070 | Msa1276940:intron | 25.0% |
| !!! | TTATTTTGTTCAGATTCTTG+GGG | - | chr8_3:11924344-11924363 | Msa1276940:intron | 25.0% |
| !!! | CTTTTAAGAAATTGTTTTGG+AGG | - | chr8_3:11924511-11924530 | Msa1276940:intron | 25.0% |
| !! | TAATTTAAGATCTTCAGATG+TGG | + | chr8_3:11924768-11924787 | None:intergenic | 25.0% |
| !!! | AAAAAGTACTCAGAATTTTG+AGG | + | chr8_3:11924819-11924838 | None:intergenic | 25.0% |
| !!! | TTCTGAGTACTTTTTTTAGA+TGG | - | chr8_3:11924824-11924843 | Msa1276940:intron | 25.0% |
| !! | TTTTCTTTCGTCATCAAAAA+AGG | + | chr8_3:11924939-11924958 | None:intergenic | 25.0% |
| !!! | ATGTTATTTCTTTGTTTGGT+AGG | - | chr8_3:11924999-11925018 | Msa1276940:CDS | 25.0% |
| ! | AAATACCAAAATGGAATACT+TGG | - | chr8_3:11925586-11925605 | Msa1276940:intron | 25.0% |
| ! | TTAGCATATTGAAAGGATTT+AGG | - | chr8_3:11926204-11926223 | Msa1276940:intron | 25.0% |
| ! | TAGCATATTGAAAGGATTTA+GGG | - | chr8_3:11926205-11926224 | Msa1276940:intron | 25.0% |
| ! | GATAGTTTATGAAAATAAGC+TGG | + | chr8_3:11926336-11926355 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACATCTTA+TGG | + | chr8_3:11926517-11926536 | None:intergenic | 25.0% |
| ! | ATTGTGATCTTGCATTTAAA+TGG | - | chr8_3:11926895-11926914 | Msa1276940:five_prime_UTR | 25.0% |
| ! | GTTGCTTAATGTTAATACTA+TGG | - | chr8_3:11926936-11926955 | Msa1276940:five_prime_UTR | 25.0% |
| !!! | TATATACTGACCTTTAAGAT+AGG | + | chr8_3:11927119-11927138 | None:intergenic | 25.0% |
| !!! | TGTTAGTTCTAGAATCATTA+CGG | - | chr8_3:11927140-11927159 | Msa1276940:five_prime_UTR | 25.0% |
| !!! | AGGTGTTTAGTTTTAGGAAA+TGG | + | chr8_3:11917535-11917554 | None:intergenic | 30.0% |
| !!! | AGAAGAAGGTGTTTAGTTTT+AGG | + | chr8_3:11917541-11917560 | None:intergenic | 30.0% |
| AGCTCAAAACTTTACATCAA+TGG | + | chr8_3:11917675-11917694 | None:intergenic | 30.0% | |
| AGATTGTTTCAATTGAGCAA+AGG | - | chr8_3:11918211-11918230 | Msa1276940:intron | 30.0% | |
| ! | ATTTTGCAGAAAATGGCTTA+TGG | - | chr8_3:11918501-11918520 | Msa1276940:intron | 30.0% |
| ATCTGAAAACAATGGAGAAT+AGG | + | chr8_3:11918530-11918549 | None:intergenic | 30.0% | |
| TTAGTCGGCAAAAAGTAATA+GGG | + | chr8_3:11918830-11918849 | None:intergenic | 30.0% | |
| ATTAGTCGGCAAAAAGTAAT+AGG | + | chr8_3:11918831-11918850 | None:intergenic | 30.0% | |
| AAAAAAGCAGACAGATTAGT+CGG | + | chr8_3:11918845-11918864 | None:intergenic | 30.0% | |
| TCAGTATTCAGTAATATCAC+AGG | + | chr8_3:11918901-11918920 | None:intergenic | 30.0% | |
| !! | TACTGATGAAGTGTTTTTAC+AGG | - | chr8_3:11918915-11918934 | Msa1276940:intron | 30.0% |
| ! | TTGTCTTATTCTCCTCAATT+TGG | - | chr8_3:11919059-11919078 | Msa1276940:intron | 30.0% |
| TATATTATCTGTGGGAGAAA+AGG | + | chr8_3:11919219-11919238 | None:intergenic | 30.0% | |
| TTACGATGCTTTCTAATTAC+CGG | - | chr8_3:11919359-11919378 | Msa1276940:intron | 30.0% | |
| !! | AATATACGAAAGAGCACTAT+TGG | - | chr8_3:11919511-11919530 | Msa1276940:CDS | 30.0% |
| AATCTCTGAGCATAGAAAAA+TGG | + | chr8_3:11919549-11919568 | None:intergenic | 30.0% | |
| ! | GAGACAAAAACAGAACATTT+TGG | - | chr8_3:11919583-11919602 | Msa1276940:CDS | 30.0% |
| ! | CAAAAACAGAACATTTTGGA+AGG | - | chr8_3:11919587-11919606 | Msa1276940:CDS | 30.0% |
| ACAATTAAGTACAATGGACA+GGG | + | chr8_3:11920156-11920175 | None:intergenic | 30.0% | |
| AACAATTAAGTACAATGGAC+AGG | + | chr8_3:11920157-11920176 | None:intergenic | 30.0% | |
| AACTTATGAAAACAACAAGG+AGG | + | chr8_3:11920481-11920500 | None:intergenic | 30.0% | |
| ! | AGTAAAACAAGGTATTTCCA+GGG | - | chr8_3:11920579-11920598 | Msa1276940:intron | 30.0% |
| AATATAGACCATCTCACTAA+TGG | - | chr8_3:11920712-11920731 | Msa1276940:intron | 30.0% | |
| AAAAAAGTCCATTAGTGAGA+TGG | + | chr8_3:11920723-11920742 | None:intergenic | 30.0% | |
| AGTCTTCAAAAGAACTTATC+TGG | - | chr8_3:11920838-11920857 | Msa1276940:intron | 30.0% | |
| !!! | GTATGTCAAACCTTTTTTTG+TGG | + | chr8_3:11921121-11921140 | None:intergenic | 30.0% |
| ! | TTTCATGTTTTGCGTATTTC+TGG | - | chr8_3:11921166-11921185 | Msa1276940:intron | 30.0% |
| ! | CTTGACAAGTTTTCATTACA+TGG | - | chr8_3:11921265-11921284 | Msa1276940:intron | 30.0% |
| TAGGTTAACCTTTCTATATC+TGG | - | chr8_3:11921297-11921316 | Msa1276940:CDS | 30.0% | |
| AACATAAACCGGTATAGTAT+AGG | + | chr8_3:11921499-11921518 | None:intergenic | 30.0% | |
| CTCGTGAAATTAACATAAAC+CGG | + | chr8_3:11921510-11921529 | None:intergenic | 30.0% | |
| ATGTCAGGTTTCATATTCAA+TGG | + | chr8_3:11921835-11921854 | None:intergenic | 30.0% | |
| ! | TTTGTTTCTCACTTACGTTT+GGG | - | chr8_3:11921893-11921912 | Msa1276940:CDS | 30.0% |
| GCTTATTTCAACTTATCTAC+TGG | + | chr8_3:11922184-11922203 | None:intergenic | 30.0% | |
| ATTCTCAAAATGAAGTCTTG+TGG | + | chr8_3:11922305-11922324 | None:intergenic | 30.0% | |
| ATACTGAACTTGATTAAGGT+AGG | - | chr8_3:11922355-11922374 | Msa1276940:CDS | 30.0% | |
| ATAATGTCAAAATAACACCC+GGG | + | chr8_3:11922664-11922683 | None:intergenic | 30.0% | |
| CTTACTCAGAAAAGGAATAT+GGG | + | chr8_3:11922819-11922838 | None:intergenic | 30.0% | |
| ACTTACTCAGAAAAGGAATA+TGG | + | chr8_3:11922820-11922839 | None:intergenic | 30.0% | |
| TTATGGTACTTACTCAGAAA+AGG | + | chr8_3:11922827-11922846 | None:intergenic | 30.0% | |
| TCATTAAATCCTTTGCCAAA+GGG | + | chr8_3:11923308-11923327 | None:intergenic | 30.0% | |
| TTCATTAAATCCTTTGCCAA+AGG | + | chr8_3:11923309-11923328 | None:intergenic | 30.0% | |
| AATGAAAGTTTATGAGTCCA+TGG | - | chr8_3:11923323-11923342 | Msa1276940:CDS | 30.0% | |
| ATGAAAGTTTATGAGTCCAT+GGG | - | chr8_3:11923324-11923343 | Msa1276940:CDS | 30.0% | |
| !! | ACACATTAGCCTTTCAATAT+GGG | - | chr8_3:11923349-11923368 | Msa1276940:CDS | 30.0% |
| AGGTAATCTTTCTATCTTTC+AGG | - | chr8_3:11923391-11923410 | Msa1276940:intron | 30.0% | |
| GGTAATCTTTCTATCTTTCA+GGG | - | chr8_3:11923392-11923411 | Msa1276940:intron | 30.0% | |
| AGTATATGTAGTGCAAATGT+TGG | - | chr8_3:11923448-11923467 | Msa1276940:intron | 30.0% | |
| AAACAGTCGTTATATAGCAT+CGG | + | chr8_3:11923512-11923531 | None:intergenic | 30.0% | |
| ! | TTTAGGTAGCAAAGTTGATT+TGG | - | chr8_3:11923561-11923580 | Msa1276940:intron | 30.0% |
| TACATGTAACAAAACAAAGG+TGG | + | chr8_3:11923703-11923722 | None:intergenic | 30.0% | |
| CAATGAATCAAGAAAACAGT+AGG | + | chr8_3:11923764-11923783 | None:intergenic | 30.0% | |
| !! | ATTTTCCCTGAATTTTGAAG+TGG | - | chr8_3:11923991-11924010 | Msa1276940:intron | 30.0% |
| ! | CTCATTACAGTTCATTCTTT+TGG | - | chr8_3:11924050-11924069 | Msa1276940:intron | 30.0% |
| !! | CAGATATTTTCTAGAAGTAG+AGG | - | chr8_3:11924085-11924104 | Msa1276940:intron | 30.0% |
| ATTGTTGTAATAACGCTGTA+GGG | + | chr8_3:11924152-11924171 | None:intergenic | 30.0% | |
| TATTGTTGTAATAACGCTGT+AGG | + | chr8_3:11924153-11924172 | None:intergenic | 30.0% | |
| TACAACAATACATATACGGA+CGG | - | chr8_3:11924163-11924182 | Msa1276940:intron | 30.0% | |
| GTATACTTTCAGATTACCTA+TGG | + | chr8_3:11924264-11924283 | None:intergenic | 30.0% | |
| ! | TCAGATCAACATTACCTTTT+TGG | - | chr8_3:11924412-11924431 | Msa1276940:intron | 30.0% |
| TCAATTCCATCTGCTAAATT+TGG | + | chr8_3:11924448-11924467 | None:intergenic | 30.0% | |
| AATTTAGCAGATGGAATTGA+TGG | - | chr8_3:11924448-11924467 | Msa1276940:intron | 30.0% | |
| ATTTAGCAGATGGAATTGAT+GGG | - | chr8_3:11924449-11924468 | Msa1276940:intron | 30.0% | |
| ATGAACCTTTACATCATTAG+AGG | - | chr8_3:11924601-11924620 | Msa1276940:intron | 30.0% | |
| TAGTACCTCTAATGATGTAA+AGG | + | chr8_3:11924609-11924628 | None:intergenic | 30.0% | |
| ACTCGAATCATCATGTTATA+TGG | + | chr8_3:11924715-11924734 | None:intergenic | 30.0% | |
| AACACAATAACAATGGCATT+TGG | + | chr8_3:11924742-11924761 | None:intergenic | 30.0% | |
| ATGACACAAACTTGTGTAAT+TGG | - | chr8_3:11925214-11925233 | Msa1276940:intron | 30.0% | |
| ACGTGCTATCAATATTATAC+AGG | - | chr8_3:11925295-11925314 | Msa1276940:intron | 30.0% | |
| ! | TGTGATCGTTTTCATAATGT+TGG | + | chr8_3:11925347-11925366 | None:intergenic | 30.0% |
| AAGTTTACCAAACAAAGTCT+CGG | + | chr8_3:11925481-11925500 | None:intergenic | 30.0% | |
| ! | CTATACCAAGTATTCCATTT+TGG | + | chr8_3:11925594-11925613 | None:intergenic | 30.0% |
| AAATGGAATACTTGGTATAG+AGG | - | chr8_3:11925594-11925613 | Msa1276940:intron | 30.0% | |
| ! | CTTTATTTGTCGAACAAAGT+TGG | - | chr8_3:11925640-11925659 | Msa1276940:intron | 30.0% |
| ! | AAATTTGAACGCAACTTTTG+AGG | + | chr8_3:11925705-11925724 | None:intergenic | 30.0% |
| AGAGCATAATACGAAATCTA+TGG | + | chr8_3:11925824-11925843 | None:intergenic | 30.0% | |
| !! | TTTCACCTAATATTTTTCGG+AGG | - | chr8_3:11925870-11925889 | Msa1276940:intron | 30.0% |
| TCAGTCTATTTCGATTGTTT+AGG | - | chr8_3:11925952-11925971 | Msa1276940:intron | 30.0% | |
| CAGTCTATTTCGATTGTTTA+GGG | - | chr8_3:11925953-11925972 | Msa1276940:intron | 30.0% | |
| ! | TTCATCCATGATTTAGAACA+CGG | - | chr8_3:11925979-11925998 | Msa1276940:intron | 30.0% |
| CCTTTCAATATGCTAATTGA+AGG | + | chr8_3:11926200-11926219 | None:intergenic | 30.0% | |
| CCTTCAATTAGCATATTGAA+AGG | - | chr8_3:11926197-11926216 | Msa1276940:intron | 30.0% | |
| AGCATATTGAAAGGATTTAG+GGG | - | chr8_3:11926206-11926225 | Msa1276940:intron | 30.0% | |
| ! | AATAAGCTGGAATTAGCTTA+TGG | + | chr8_3:11926323-11926342 | None:intergenic | 30.0% |
| AAGCTATCTTAGAGAGATTA+TGG | + | chr8_3:11926541-11926560 | None:intergenic | 30.0% | |
| !! | AAAATGGATTAGGTCGTATT+TGG | + | chr8_3:11926705-11926724 | None:intergenic | 30.0% |
| TGTCATAACATGTTAGTCAA+GGG | - | chr8_3:11926743-11926762 | Msa1276940:CDS | 30.0% | |
| !!! | TGGATTTCATTTTTTGAGCA+TGG | - | chr8_3:11926809-11926828 | Msa1276940:exon | 30.0% |
| !!! | TTTCATTTTTTGAGCATGGA+AGG | - | chr8_3:11926813-11926832 | Msa1276940:exon | 30.0% |
| !!! | TTCATTTTTTGAGCATGGAA+GGG | - | chr8_3:11926814-11926833 | Msa1276940:exon | 30.0% |
| ! | AAAAACCTAGTTCTTGAGTT+AGG | - | chr8_3:11926962-11926981 | Msa1276940:five_prime_UTR | 30.0% |
| ! | AAAACCTAGTTCTTGAGTTA+GGG | - | chr8_3:11926963-11926982 | Msa1276940:five_prime_UTR | 30.0% |
| ATTGATGCCAATATTGTTGA+TGG | - | chr8_3:11927018-11927037 | Msa1276940:five_prime_UTR | 30.0% | |
| TTCATTCACAATATTGTCTG+AGG | + | chr8_3:11927063-11927082 | None:intergenic | 30.0% | |
| TGTGAATGAACTAATAACTG+AGG | - | chr8_3:11927073-11927092 | Msa1276940:five_prime_UTR | 30.0% | |
| TACATTAATATGTGCCCTTA+GGG | + | chr8_3:11927234-11927253 | None:intergenic | 30.0% | |
| !!! | AGCTTTGTTTTGAAGCTCAA+GGG | - | chr8_3:11917825-11917844 | Msa1276940:intron | 35.0% |
| TTTGCTACATGCAGAAGTTT+AGG | - | chr8_3:11917948-11917967 | Msa1276940:intron | 35.0% | |
| GTGGATTCTTCAAGAAAACA+TGG | - | chr8_3:11918373-11918392 | Msa1276940:intron | 35.0% | |
| TATAATCTTTCAAGCCAAGC+AGG | + | chr8_3:11918413-11918432 | None:intergenic | 35.0% | |
| AACACAAATGACACCACAAA+TGG | + | chr8_3:11918438-11918457 | None:intergenic | 35.0% | |
| ! | TCTCCATTGTTTTCAGATTG+TGG | - | chr8_3:11918532-11918551 | Msa1276940:intron | 35.0% |
| ! | CTCCATTGTTTTCAGATTGT+GGG | - | chr8_3:11918533-11918552 | Msa1276940:intron | 35.0% |
| ! | TCCATTGTTTTCAGATTGTG+GGG | - | chr8_3:11918534-11918553 | Msa1276940:intron | 35.0% |
| GCTTATGCCAATAAGCTATT+TGG | - | chr8_3:11918677-11918696 | Msa1276940:intron | 35.0% | |
| TATGCCAATAAGCTATTTGG+AGG | - | chr8_3:11918680-11918699 | Msa1276940:intron | 35.0% | |
| AGTTCCTCCAAATAGCTTAT+TGG | + | chr8_3:11918687-11918706 | None:intergenic | 35.0% | |
| AAAAAGTAATAGGGGGAGTT+TGG | + | chr8_3:11918821-11918840 | None:intergenic | 35.0% | |
| TAGTCGGCAAAAAGTAATAG+GGG | + | chr8_3:11918829-11918848 | None:intergenic | 35.0% | |
| GGAATCTTTCAAGAGAAATG+TGG | + | chr8_3:11918880-11918899 | None:intergenic | 35.0% | |
| TCCTCAATTTGGTAAGATTG+AGG | - | chr8_3:11919070-11919089 | Msa1276940:intron | 35.0% | |
| TCCTCAATCTTACCAAATTG+AGG | + | chr8_3:11919074-11919093 | None:intergenic | 35.0% | |
| AGATTCTGGATATAGTCACA+TGG | + | chr8_3:11919100-11919119 | None:intergenic | 35.0% | |
| GTGACTATATCCAGAATCTT+TGG | - | chr8_3:11919101-11919120 | Msa1276940:intron | 35.0% | |
| CAGAATCTTTGGCTGAAAAT+GGG | - | chr8_3:11919112-11919131 | Msa1276940:intron | 35.0% | |
| AGAATCTTTGGCTGAAAATG+GGG | - | chr8_3:11919113-11919132 | Msa1276940:intron | 35.0% | |
| AATGGGGAAAAGGCTAATTA+AGG | - | chr8_3:11919129-11919148 | Msa1276940:intron | 35.0% | |
| ! | TTCTGGAAATGGGATCTAAA+AGG | - | chr8_3:11919186-11919205 | Msa1276940:intron | 35.0% |
| ! | AACGACAAGATTTTCTCAGA+AGG | + | chr8_3:11919476-11919495 | None:intergenic | 35.0% |
| GCTCAGAGATTCTATATGAT+TGG | - | chr8_3:11919558-11919577 | Msa1276940:CDS | 35.0% | |
| GGTCTTAAAGATTGACAGAT+TGG | - | chr8_3:11919608-11919627 | Msa1276940:CDS | 35.0% | |
| !! | ACAACTTGCTATGGAATCAT+CGG | - | chr8_3:11919747-11919766 | Msa1276940:intron | 35.0% |
| GTAATAAGCAGCATGTAGTA+TGG | + | chr8_3:11919928-11919947 | None:intergenic | 35.0% | |
| ! | ACATGCTGCTTATTACAAAG+CGG | - | chr8_3:11919932-11919951 | Msa1276940:intron | 35.0% |
| TTCAAGTGTGCGATCAAATT+TGG | - | chr8_3:11920026-11920045 | Msa1276940:intron | 35.0% | |
| !! | CATTTTCTAAGGATGAGAAC+AGG | - | chr8_3:11920049-11920068 | Msa1276940:intron | 35.0% |
| ATGTACCTGTAATGTGTCTA+TGG | - | chr8_3:11920089-11920108 | Msa1276940:intron | 35.0% | |
| ATGTACCATAGACACATTAC+AGG | + | chr8_3:11920097-11920116 | None:intergenic | 35.0% | |
| ! | TTCATTTTACGGAACTGTAC+AGG | - | chr8_3:11920515-11920534 | Msa1276940:CDS | 35.0% |
| ! | GAGTAAAACAAGGTATTTCC+AGG | - | chr8_3:11920578-11920597 | Msa1276940:CDS | 35.0% |
| CAAGAAGTTTCTATGCAGTA+TGG | - | chr8_3:11920768-11920787 | Msa1276940:intron | 35.0% | |
| ATGCAGTATGGATCTTACAA+AGG | - | chr8_3:11920780-11920799 | Msa1276940:intron | 35.0% | |
| CTTATCTGGTCATAATGTCA+CGG | - | chr8_3:11920852-11920871 | Msa1276940:intron | 35.0% | |
| TTATCTGGTCATAATGTCAC+GGG | - | chr8_3:11920853-11920872 | Msa1276940:intron | 35.0% | |
| ATAATCTCCAGAATACTTCC+TGG | - | chr8_3:11920935-11920954 | Msa1276940:intron | 35.0% | |
| !!! | TTTTTTGTGGTTCAACTTCG+AGG | + | chr8_3:11921108-11921127 | None:intergenic | 35.0% |
| CGAAGTTGAACCACAAAAAA+AGG | - | chr8_3:11921108-11921127 | Msa1276940:intron | 35.0% | |
| CATGAAAGTAAACTGGCAAT+AGG | + | chr8_3:11921153-11921172 | None:intergenic | 35.0% | |
| CGCAAAACATGAAAGTAAAC+TGG | + | chr8_3:11921160-11921179 | None:intergenic | 35.0% | |
| TGGTAATCAAGTCAAACTTG+CGG | + | chr8_3:11921323-11921342 | None:intergenic | 35.0% | |
| ! | TTGACTTGATTACCATTGCT+AGG | - | chr8_3:11921328-11921347 | Msa1276940:CDS | 35.0% |
| ! | ACGAGTTTCTAGACAAGATT+TGG | - | chr8_3:11921525-11921544 | Msa1276940:CDS | 35.0% |
| GACTAGAGATACATAAGAGA+AGG | + | chr8_3:11921597-11921616 | None:intergenic | 35.0% | |
| !!! | GTTTCTTTATTTTGTGGTGC+AGG | - | chr8_3:11921650-11921669 | Msa1276940:intron | 35.0% |
| AGGTTTCATATTCAATGGAG+AGG | + | chr8_3:11921830-11921849 | None:intergenic | 35.0% | |
| CAAACGTAAGTGAGAAACAA+AGG | + | chr8_3:11921894-11921913 | None:intergenic | 35.0% | |
| ! | CTTTGTTTCTCACTTACGTT+TGG | - | chr8_3:11921892-11921911 | Msa1276940:CDS | 35.0% |
| TACGTTTGGGTAAACAACTT+AGG | - | chr8_3:11921906-11921925 | Msa1276940:CDS | 35.0% | |
| TAACATAATATGGGCCTGTT+TGG | + | chr8_3:11922218-11922237 | None:intergenic | 35.0% | |
| ! | TTTAGACTGACTGCTCATTT+TGG | - | chr8_3:11922238-11922257 | Msa1276940:intron | 35.0% |
| GAGAATCTTGTCATGAGATA+TGG | - | chr8_3:11922319-11922338 | Msa1276940:CDS | 35.0% | |
| CGAGATGGAAAAATAAAACC+TGG | + | chr8_3:11922410-11922429 | None:intergenic | 35.0% | |
| ATCTTAGTTTAGACACGAGA+TGG | + | chr8_3:11922425-11922444 | None:intergenic | 35.0% | |
| ! | ATTGTCTGAGGTATCTTCAT+TGG | - | chr8_3:11922571-11922590 | Msa1276940:intron | 35.0% |
| ! | TTGTCTGAGGTATCTTCATT+GGG | - | chr8_3:11922572-11922591 | Msa1276940:intron | 35.0% |
| !!! | TTTTTTGGTCCATGCTCAAT+AGG | - | chr8_3:11922631-11922650 | Msa1276940:intron | 35.0% |
| ATTAACAACTTTCAGCAGCA+AGG | - | chr8_3:11922687-11922706 | Msa1276940:intron | 35.0% | |
| AGGGTCAAAATGCATTGTTA+TGG | + | chr8_3:11922844-11922863 | None:intergenic | 35.0% | |
| CATTAGTACAACAGCAAAGA+GGG | + | chr8_3:11922863-11922882 | None:intergenic | 35.0% | |
| ATTGAAGATCAAACCATCTG+TGG | - | chr8_3:11922913-11922932 | Msa1276940:CDS | 35.0% | |
| GATGAATTTCTTGTTGAGCA+AGG | - | chr8_3:11923039-11923058 | Msa1276940:intron | 35.0% | |
| GCTGATAAGGAAACAGAAAA+TGG | - | chr8_3:11923081-11923100 | Msa1276940:intron | 35.0% | |
| AAGGAAACAGAAAATGGCAA+TGG | - | chr8_3:11923087-11923106 | Msa1276940:intron | 35.0% | |
| AATGGCAATGGTTATTACAG+TGG | - | chr8_3:11923099-11923118 | Msa1276940:intron | 35.0% | |
| AATGGTTATTACAGTGGTGA+TGG | - | chr8_3:11923105-11923124 | Msa1276940:intron | 35.0% | |
| ATAAGCATACTGTGCAACAT+TGG | + | chr8_3:11923214-11923233 | None:intergenic | 35.0% | |
| AATGTTGCACAGTATGCTTA+TGG | - | chr8_3:11923213-11923232 | Msa1276940:intron | 35.0% | |
| GAATCCCCACATATTAAACT+TGG | - | chr8_3:11923279-11923298 | Msa1276940:intron | 35.0% | |
| GTTGCCAAGTTTAATATGTG+GGG | + | chr8_3:11923286-11923305 | None:intergenic | 35.0% | |
| GGTTGCCAAGTTTAATATGT+GGG | + | chr8_3:11923287-11923306 | None:intergenic | 35.0% | |
| TATTAAACTTGGCAACCCTT+TGG | - | chr8_3:11923290-11923309 | Msa1276940:intron | 35.0% | |
| !! | GACACATTAGCCTTTCAATA+TGG | - | chr8_3:11923348-11923367 | Msa1276940:CDS | 35.0% |
| !! | CACATTAGCCTTTCAATATG+GGG | - | chr8_3:11923350-11923369 | Msa1276940:CDS | 35.0% |
| !! | ACATTAGCCTTTCAATATGG+GGG | - | chr8_3:11923351-11923370 | Msa1276940:CDS | 35.0% |
| AGTGCAAATGTTGGACTTTA+TGG | - | chr8_3:11923457-11923476 | Msa1276940:intron | 35.0% | |
| ! | CGTTATATAGCATCGGATTT+CGG | + | chr8_3:11923505-11923524 | None:intergenic | 35.0% |
| TGATGATCTTCAACTCACTA+GGG | + | chr8_3:11923628-11923647 | None:intergenic | 35.0% | |
| ATGATGATCTTCAACTCACT+AGG | + | chr8_3:11923629-11923648 | None:intergenic | 35.0% | |
| ! | CATCATCACTTCTTGATTTG+AGG | - | chr8_3:11923862-11923881 | Msa1276940:CDS | 35.0% |
| TTATGAACTCCTCTCGTAAA+AGG | - | chr8_3:11923893-11923912 | Msa1276940:CDS | 35.0% | |
| ! | TTTCTAGAAGTAGAGGTCAA+TGG | - | chr8_3:11924092-11924111 | Msa1276940:intron | 35.0% |
| ACAACAATACATATACGGAC+GGG | - | chr8_3:11924164-11924183 | Msa1276940:intron | 35.0% | |
| !! | CATTACCTTTTTGGAAGTCA+TGG | - | chr8_3:11924421-11924440 | Msa1276940:intron | 35.0% |
| ! | ATGGAATTGATGGGTATGTT+TGG | - | chr8_3:11924458-11924477 | Msa1276940:intron | 35.0% |
| !!! | TAAGAAATTGTTTTGGAGGG+AGG | - | chr8_3:11924515-11924534 | Msa1276940:intron | 35.0% |
| GTGGAGTAACACAATAACAA+TGG | + | chr8_3:11924749-11924768 | None:intergenic | 35.0% | |
| ! | AGCTTTGACTTATCTATCGA+AGG | - | chr8_3:11924874-11924893 | Msa1276940:intron | 35.0% |
| TCGAAGGACAAATATCACAT+AGG | - | chr8_3:11924890-11924909 | Msa1276940:intron | 35.0% | |
| TCTTTCGTCATCAAAAAAGG+AGG | + | chr8_3:11924936-11924955 | None:intergenic | 35.0% | |
| ATTAGAAGATCACAATCCGA+TGG | - | chr8_3:11925028-11925047 | Msa1276940:CDS | 35.0% | |
| ! | TCAGGATTTTCAGATGAGTA+CGG | + | chr8_3:11925109-11925128 | None:intergenic | 35.0% |
| ! | TCCTGATAAGCAATCTCTTT+TGG | - | chr8_3:11925123-11925142 | Msa1276940:intron | 35.0% |
| TCCAAAAGAGATTGCTTATC+AGG | + | chr8_3:11925127-11925146 | None:intergenic | 35.0% | |
| CACGTAAGTTTCTAAACATG+TGG | + | chr8_3:11925280-11925299 | None:intergenic | 35.0% | |
| TTATACAGGCAAGTTTATGC+AGG | - | chr8_3:11925309-11925328 | Msa1276940:intron | 35.0% | |
| CTTTCTTCCTAAATGAGAAG+CGG | - | chr8_3:11925521-11925540 | Msa1276940:intron | 35.0% | |
| !!! | ACTTAGAAGTTTGTTTTGGC+TGG | + | chr8_3:11925549-11925568 | None:intergenic | 35.0% |
| !! | CCTCACTTAGAAGTTTGTTT+TGG | + | chr8_3:11925553-11925572 | None:intergenic | 35.0% |
| CCAAAACAAACTTCTAAGTG+AGG | - | chr8_3:11925550-11925569 | Msa1276940:intron | 35.0% | |
| !!! | TCGAACAAAGTTGGTTTTGT+TGG | - | chr8_3:11925649-11925668 | Msa1276940:intron | 35.0% |
| !!! | GTTGGTTTTGTTGGTTGTTT+TGG | - | chr8_3:11925658-11925677 | Msa1276940:intron | 35.0% |
| AAAGTTGCGTTCAAATTTGC+TGG | - | chr8_3:11925707-11925726 | Msa1276940:intron | 35.0% | |
| TTAGGCCTCCGAAAAATATT+AGG | + | chr8_3:11925878-11925897 | None:intergenic | 35.0% | |
| TCTATTTCGATTGTTTAGGG+AGG | - | chr8_3:11925956-11925975 | Msa1276940:intron | 35.0% | |
| ! | ATTGTCCGTGTTCTAAATCA+TGG | + | chr8_3:11925987-11926006 | None:intergenic | 35.0% |
| GGACTATAGCATGAACATAA+AGG | + | chr8_3:11926033-11926052 | None:intergenic | 35.0% | |
| TAATTGAAGGAACTGAGTGA+AGG | + | chr8_3:11926187-11926206 | None:intergenic | 35.0% | |
| GCATATTGAAAGGATTTAGG+GGG | - | chr8_3:11926207-11926226 | Msa1276940:intron | 35.0% | |
| ATCACAAGTGCTTATGTCAA+TGG | + | chr8_3:11926261-11926280 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTGATACTGTTT+TGG | - | chr8_3:11926268-11926287 | Msa1276940:intron | 35.0% |
| ! | AGCACTTGTGATACTGTTTT+GGG | - | chr8_3:11926269-11926288 | Msa1276940:intron | 35.0% |
| !!! | ATACTGTTTTGGGGAGTTTA+TGG | - | chr8_3:11926279-11926298 | Msa1276940:intron | 35.0% |
| ! | GAATTAGCTTATGGACACAT+CGG | + | chr8_3:11926314-11926333 | None:intergenic | 35.0% |
| AGTGCGTAATCAAGAGTTTA+TGG | - | chr8_3:11926473-11926492 | Msa1276940:intron | 35.0% | |
| CTGTCATAACATGTTAGTCA+AGG | - | chr8_3:11926742-11926761 | Msa1276940:CDS | 35.0% | |
| TACTGAAGTGAATTCTGATG+TGG | - | chr8_3:11926773-11926792 | Msa1276940:CDS | 35.0% | |
| GTGAATTCTGATGTGGAATT+AGG | - | chr8_3:11926780-11926799 | Msa1276940:CDS | 35.0% | |
| AATTCTGATGTGGAATTAGG+AGG | - | chr8_3:11926783-11926802 | Msa1276940:CDS | 35.0% | |
| ATTCTGATGTGGAATTAGGA+GGG | - | chr8_3:11926784-11926803 | Msa1276940:CDS | 35.0% | |
| ACCTGTACCATCAACAATAT+TGG | + | chr8_3:11927028-11927047 | None:intergenic | 35.0% | |
| TGAATCTGGACCTATCTTAA+AGG | - | chr8_3:11927106-11927125 | Msa1276940:five_prime_UTR | 35.0% | |
| ! | ACATAACTGCCTTTTCAGTT+AGG | - | chr8_3:11927167-11927186 | Msa1276940:five_prime_UTR | 35.0% |
| GTACATTAATATGTGCCCTT+AGG | + | chr8_3:11927235-11927254 | None:intergenic | 35.0% | |
| !!! | GAGCTTTGTTTTGAAGCTCA+AGG | - | chr8_3:11917824-11917843 | Msa1276940:intron | 40.0% |
| AGGGATCTGAATTGTGATGA+TGG | - | chr8_3:11917844-11917863 | Msa1276940:intron | 40.0% | |
| GATGGAGATTGAAGAAGAGA+AGG | - | chr8_3:11917862-11917881 | Msa1276940:intron | 40.0% | |
| GAGATTGAAGAAGAGAAGGT+GGG | - | chr8_3:11917866-11917885 | Msa1276940:intron | 40.0% | |
| AGATTGAAGAAGAGAAGGTG+GGG | - | chr8_3:11917867-11917886 | Msa1276940:intron | 40.0% | |
| TAGGCTCTATGAAACTTCTC+AGG | - | chr8_3:11917967-11917986 | Msa1276940:intron | 40.0% | |
| TCTGTTTAATTGGATTCGCG+TGG | - | chr8_3:11918354-11918373 | Msa1276940:intron | 40.0% | |
| AAGAAAACATGGATCCATCC+AGG | - | chr8_3:11918384-11918403 | Msa1276940:intron | 40.0% | |
| ! | CCATTGTTTTCAGATTGTGG+GGG | - | chr8_3:11918535-11918554 | Msa1276940:intron | 40.0% |
| AGTCGGCAAAAAGTAATAGG+GGG | + | chr8_3:11918828-11918847 | None:intergenic | 40.0% | |
| ! | CCATTTTCAGCCAAAGATTC+TGG | + | chr8_3:11919114-11919133 | None:intergenic | 40.0% |
| CCAGAATCTTTGGCTGAAAA+TGG | - | chr8_3:11919111-11919130 | Msa1276940:intron | 40.0% | |
| TTTGGCTGAAAATGGGGAAA+AGG | - | chr8_3:11919119-11919138 | Msa1276940:intron | 40.0% | |
| !! | AAAATGCCGCTTTCTTCTTC+TGG | - | chr8_3:11919169-11919188 | Msa1276940:intron | 40.0% |
| CCATTTCCAGAAGAAGAAAG+CGG | + | chr8_3:11919178-11919197 | None:intergenic | 40.0% | |
| ! | CGCTTTCTTCTTCTGGAAAT+GGG | - | chr8_3:11919176-11919195 | Msa1276940:intron | 40.0% |
| TTATCTGTGGGAGAAAAGGA+AGG | + | chr8_3:11919215-11919234 | None:intergenic | 40.0% | |
| AACAAATTTAAGCCCTCCTG+TGG | + | chr8_3:11919727-11919746 | None:intergenic | 40.0% | |
| ATTACAAAGCGGAGGAAGAT+CGG | - | chr8_3:11919943-11919962 | Msa1276940:intron | 40.0% | |
| TTTGATCGCACACTTGAATG+TGG | + | chr8_3:11920024-11920043 | None:intergenic | 40.0% | |
| AGTACCACAGAAAGATGAGA+GGG | + | chr8_3:11920369-11920388 | None:intergenic | 40.0% | |
| AGTTCTTAACTCGTGGAATC+AGG | - | chr8_3:11920911-11920930 | Msa1276940:intron | 40.0% | |
| GAAGTTAATTAGTACGGTGC+TGG | - | chr8_3:11921026-11921045 | Msa1276940:intron | 40.0% | |
| ! | CATATCACTAGGCTCTTTTC+TGG | + | chr8_3:11921215-11921234 | None:intergenic | 40.0% |
| CATTACATGGTATCACGTGT+AGG | - | chr8_3:11921278-11921297 | Msa1276940:intron | 40.0% | |
| CGAGTGTACCTATACTATAC+CGG | - | chr8_3:11921488-11921507 | Msa1276940:CDS | 40.0% | |
| TGAAACGAGGAGTCAATGAA+AGG | - | chr8_3:11921677-11921696 | Msa1276940:intron | 40.0% | |
| GAAACGAGGAGTCAATGAAA+GGG | - | chr8_3:11921678-11921697 | Msa1276940:intron | 40.0% | |
| AAACGAGGAGTCAATGAAAG+GGG | - | chr8_3:11921679-11921698 | Msa1276940:intron | 40.0% | |
| !! | CACAGAACTGATTTGCATTG+GGG | + | chr8_3:11921764-11921783 | None:intergenic | 40.0% |
| !! | CCACAGAACTGATTTGCATT+GGG | + | chr8_3:11921765-11921784 | None:intergenic | 40.0% |
| !! | ACCACAGAACTGATTTGCAT+TGG | + | chr8_3:11921766-11921785 | None:intergenic | 40.0% |
| AAGCACTTGGGAGACTATTT+GGG | + | chr8_3:11922158-11922177 | None:intergenic | 40.0% | |
| TAAGCACTTGGGAGACTATT+TGG | + | chr8_3:11922159-11922178 | None:intergenic | 40.0% | |
| ATCTACTGGCATAAGCACTT+GGG | + | chr8_3:11922170-11922189 | None:intergenic | 40.0% | |
| TATCTACTGGCATAAGCACT+TGG | + | chr8_3:11922171-11922190 | None:intergenic | 40.0% | |
| AGCCAATCCAATTTCCAAAC+AGG | - | chr8_3:11922201-11922220 | Msa1276940:intron | 40.0% | |
| ATATGGGCCTGTTTGGAAAT+TGG | + | chr8_3:11922211-11922230 | None:intergenic | 40.0% | |
| ! | AGTCTTGTGGCTTCAAACAT+TGG | + | chr8_3:11922292-11922311 | None:intergenic | 40.0% |
| TAGGCATTTCTACACGTGTA+AGG | - | chr8_3:11922374-11922393 | Msa1276940:CDS | 40.0% | |
| GTGTAAGGAAATCATTGACC+AGG | - | chr8_3:11922389-11922408 | Msa1276940:CDS | 40.0% | |
| GGACAAAAACCTATTGAGCA+TGG | + | chr8_3:11922643-11922662 | None:intergenic | 40.0% | |
| ! | TGCTCAATAGGTTTTTGTCC+CGG | - | chr8_3:11922643-11922662 | Msa1276940:intron | 40.0% |
| ACCAATGTGCTTTCACAACT+GGG | - | chr8_3:11922712-11922731 | Msa1276940:intron | 40.0% | |
| GAATATGGGAATAATCCCTC+TGG | + | chr8_3:11922805-11922824 | None:intergenic | 40.0% | |
| GCATTAGTACAACAGCAAAG+AGG | + | chr8_3:11922864-11922883 | None:intergenic | 40.0% | |
| AAGCACTCACATTCCAATTG+TGG | + | chr8_3:11922942-11922961 | None:intergenic | 40.0% | |
| TTACAGTGTCAAAGCCAAGA+CGG | - | chr8_3:11923140-11923159 | Msa1276940:intron | 40.0% | |
| TAAACCCAAATGCATGTAGC+TGG | + | chr8_3:11923257-11923276 | None:intergenic | 40.0% | |
| GGGTTGCCAAGTTTAATATG+TGG | + | chr8_3:11923288-11923307 | None:intergenic | 40.0% | |
| ATGATCTTCAACTCACTAGG+GGG | + | chr8_3:11923626-11923645 | None:intergenic | 40.0% | |
| GATGATCTTCAACTCACTAG+GGG | + | chr8_3:11923627-11923646 | None:intergenic | 40.0% | |
| TCTATTGTTGGCATGTGAAG+TGG | + | chr8_3:11923666-11923685 | None:intergenic | 40.0% | |
| TGTGTGTGAGCTTCTATTGT+TGG | + | chr8_3:11923678-11923697 | None:intergenic | 40.0% | |
| TAGAAGTAGAGGTCAATGGA+AGG | - | chr8_3:11924096-11924115 | Msa1276940:intron | 40.0% | |
| TAGGGTTCGAATAAGCTCTT+GGG | + | chr8_3:11924134-11924153 | None:intergenic | 40.0% | |
| ACATGCATAGTTGCTTCCAT+AGG | - | chr8_3:11924245-11924264 | Msa1276940:CDS | 40.0% | |
| TTGGACCATGACTTCCAAAA+AGG | + | chr8_3:11924429-11924448 | None:intergenic | 40.0% | |
| CATGGTCCAAATTTAGCAGA+TGG | - | chr8_3:11924439-11924458 | Msa1276940:intron | 40.0% | |
| CAATCCGATGGCAATATTCT+CGG | - | chr8_3:11925040-11925059 | Msa1276940:CDS | 40.0% | |
| TTCACCGAGAATATTGCCAT+CGG | + | chr8_3:11925047-11925066 | None:intergenic | 40.0% | |
| GTGAAAGTGACTCTACAACT+AGG | - | chr8_3:11925062-11925081 | Msa1276940:CDS | 40.0% | |
| CCACAAGTAGACTTCAATAG+AGG | + | chr8_3:11925151-11925170 | None:intergenic | 40.0% | |
| CCTCTATTGAAGTCTACTTG+TGG | - | chr8_3:11925148-11925167 | Msa1276940:intron | 40.0% | |
| GAACTTCTATCTGTCAATGC+AGG | - | chr8_3:11925170-11925189 | Msa1276940:intron | 40.0% | |
| AGGCAAGTTTATGCAGGAAT+GGG | - | chr8_3:11925315-11925334 | Msa1276940:intron | 40.0% | |
| GTGAAGAAGAACTACTTGAC+AGG | - | chr8_3:11925448-11925467 | Msa1276940:intron | 40.0% | |
| TGTAGTTCCGAGACTTTGTT+TGG | - | chr8_3:11925471-11925490 | Msa1276940:intron | 40.0% | |
| TTCGCAAAATTGCATGAGAG+CGG | + | chr8_3:11926054-11926073 | None:intergenic | 40.0% | |
| GGAAGACATGAAAAAGAGAG+CGG | - | chr8_3:11926097-11926116 | Msa1276940:intron | 40.0% | |
| GAAGACATGAAAAAGAGAGC+GGG | - | chr8_3:11926098-11926117 | Msa1276940:intron | 40.0% | |
| AAGACATGAAAAAGAGAGCG+GGG | - | chr8_3:11926099-11926118 | Msa1276940:intron | 40.0% | |
| AAAAGGTGATTGCTAAGCTC+TGG | + | chr8_3:11926136-11926155 | None:intergenic | 40.0% | |
| ! | GCACTTGTGATACTGTTTTG+GGG | - | chr8_3:11926270-11926289 | Msa1276940:intron | 40.0% |
| CAAACCCTAACTCAAGAACT+AGG | + | chr8_3:11926970-11926989 | None:intergenic | 40.0% | |
| ! | CTAGTTCTTGAGTTAGGGTT+TGG | - | chr8_3:11926968-11926987 | Msa1276940:five_prime_UTR | 40.0% |
| !! | GCCAATATTGTTGATGGTAC+AGG | - | chr8_3:11927024-11927043 | Msa1276940:five_prime_UTR | 40.0% |
| TGAACTAATAACTGAGGTGC+CGG | - | chr8_3:11927079-11927098 | Msa1276940:five_prime_UTR | 40.0% | |
| AAATGCTAACATGTGCCCTA+AGG | - | chr8_3:11927216-11927235 | Msa1276940:five_prime_UTR | 40.0% | |
| AATGCTAACATGTGCCCTAA+GGG | - | chr8_3:11927217-11927236 | Msa1276940:five_prime_UTR | 40.0% | |
| GGAGATTGAAGAAGAGAAGG+TGG | - | chr8_3:11917865-11917884 | Msa1276940:intron | 45.0% | |
| !!! | GTTGGTGCTGGTTTTGAAGA+TGG | - | chr8_3:11917911-11917930 | Msa1276940:intron | 45.0% |
| ! | GTGCAGTTTTCTTGTTCTGC+TGG | - | chr8_3:11918104-11918123 | Msa1276940:intron | 45.0% |
| CCCCCACAATCTGAAAACAA+TGG | + | chr8_3:11918538-11918557 | None:intergenic | 45.0% | |
| !! | TTTCAGATTGTGGGGGCATT+TGG | - | chr8_3:11918542-11918561 | Msa1276940:intron | 45.0% |
| CAACATGCATGACACTGTGA+TGG | + | chr8_3:11918999-11919018 | None:intergenic | 45.0% | |
| ! | CCGCTTTCTTCTTCTGGAAA+TGG | - | chr8_3:11919175-11919194 | Msa1276940:intron | 45.0% |
| AGACAAACGAAGTTCGTTGC+CGG | + | chr8_3:11919381-11919400 | None:intergenic | 45.0% | |
| !! | ACGAAAGAGCACTATTGGTG+TGG | - | chr8_3:11919516-11919535 | Msa1276940:CDS | 45.0% |
| ! | TGAAATGCTGAAGCGTCTAC+AGG | - | chr8_3:11919689-11919708 | Msa1276940:intron | 45.0% |
| ! | TGCTGCTTATTACAAAGCGG+AGG | - | chr8_3:11919935-11919954 | Msa1276940:intron | 45.0% |
| AGGAAGATCGGCACAATATG+TGG | - | chr8_3:11919955-11919974 | Msa1276940:intron | 45.0% | |
| CGCACACTTGAATGTGGAAT+TGG | + | chr8_3:11920018-11920037 | None:intergenic | 45.0% | |
| TTCAGTGCGTATGCACAATG+TGG | - | chr8_3:11920328-11920347 | Msa1276940:intron | 45.0% | |
| TCAGTGCGTATGCACAATGT+GGG | - | chr8_3:11920329-11920348 | Msa1276940:intron | 45.0% | |
| !! | AAGATGAGAGGGTTGACTTG+AGG | + | chr8_3:11920358-11920377 | None:intergenic | 45.0% |
| TCAACCCTCTCATCTTTCTG+TGG | - | chr8_3:11920362-11920381 | Msa1276940:intron | 45.0% | |
| GAGTACCACAGAAAGATGAG+AGG | + | chr8_3:11920370-11920389 | None:intergenic | 45.0% | |
| AGGTATTTCCAGGGTTCACA+TGG | - | chr8_3:11920588-11920607 | Msa1276940:intron | 45.0% | |
| GGTATTTCCAGGGTTCACAT+GGG | - | chr8_3:11920589-11920608 | Msa1276940:intron | 45.0% | |
| TGGAACGAGTTCTTAACTCG+TGG | - | chr8_3:11920904-11920923 | Msa1276940:intron | 45.0% | |
| !! | CAACAGTCCAGGAAGTATTC+TGG | + | chr8_3:11920945-11920964 | None:intergenic | 45.0% |
| ATAGACTAAGGCAACAGTCC+AGG | + | chr8_3:11920956-11920975 | None:intergenic | 45.0% | |
| TGGACTGTTGCCTTAGTCTA+TGG | - | chr8_3:11920955-11920974 | Msa1276940:intron | 45.0% | |
| !!! | CTCTTTTCTGGTGCTGTCAA+TGG | + | chr8_3:11921203-11921222 | None:intergenic | 45.0% |
| ACTTGCGGCCAGATATAGAA+AGG | + | chr8_3:11921308-11921327 | None:intergenic | 45.0% | |
| CATCTTTGCACTTGTGATCC+TGG | - | chr8_3:11921448-11921467 | Msa1276940:CDS | 45.0% | |
| ATTTGGCTGCCATTCCTTAC+TGG | - | chr8_3:11921542-11921561 | Msa1276940:CDS | 45.0% | |
| ! | TGGTGCAGGTATTTGAAACG+AGG | - | chr8_3:11921664-11921683 | Msa1276940:intron | 45.0% |
| GTCTTTGCAGATGCTAGTGA+TGG | - | chr8_3:11921736-11921755 | Msa1276940:intron | 45.0% | |
| CCCAATGCAAATCAGTTCTG+TGG | - | chr8_3:11921762-11921781 | Msa1276940:intron | 45.0% | |
| AAAAGAGAGGGATTGAACCC+CGG | + | chr8_3:11921795-11921814 | None:intergenic | 45.0% | |
| ! | AATCCCTCTCTTTTGGTCTC+AGG | - | chr8_3:11921801-11921820 | Msa1276940:intron | 45.0% |
| CTTCCTGAGACCAAAAGAGA+GGG | + | chr8_3:11921807-11921826 | None:intergenic | 45.0% | |
| GGCCTGTTTGGAAATTGGAT+TGG | + | chr8_3:11922206-11922225 | None:intergenic | 45.0% | |
| GTTCGCAGAATAGTTTCACG+CGG | + | chr8_3:11922501-11922520 | None:intergenic | 45.0% | |
| !! | CTTAACAGCATTGGCGAACT+CGG | + | chr8_3:11922523-11922542 | None:intergenic | 45.0% |
| TGAGTAAGGAGGATTGTCTG+AGG | - | chr8_3:11922559-11922578 | Msa1276940:intron | 45.0% | |
| ! | GCTCAATAGGTTTTTGTCCC+GGG | - | chr8_3:11922644-11922663 | Msa1276940:intron | 45.0% |
| ! | CAGTTGTGAAAGCACATTGG+TGG | + | chr8_3:11922713-11922732 | None:intergenic | 45.0% |
| CACCAATGTGCTTTCACAAC+TGG | - | chr8_3:11922711-11922730 | Msa1276940:intron | 45.0% | |
| ! | TCCCAGTTGTGAAAGCACAT+TGG | + | chr8_3:11922716-11922735 | None:intergenic | 45.0% |
| GCTTTCACAACTGGGAAAAG+TGG | - | chr8_3:11922720-11922739 | Msa1276940:intron | 45.0% | |
| ATGTTCGCGTTGAATCTGAC+TGG | - | chr8_3:11922745-11922764 | Msa1276940:intron | 45.0% | |
| ACACCAAACATGAGTCCAGA+GGG | - | chr8_3:11922787-11922806 | Msa1276940:intron | 45.0% | |
| AATCCCTCTGGACTCATGTT+TGG | + | chr8_3:11922793-11922812 | None:intergenic | 45.0% | |
| AAAGCCAAGACGGTTCAATC+AGG | - | chr8_3:11923150-11923169 | Msa1276940:intron | 45.0% | |
| CATACTGTGCAACATTGGTG+CGG | + | chr8_3:11923209-11923228 | None:intergenic | 45.0% | |
| TGCAGAACCCCCATATTGAA+AGG | + | chr8_3:11923361-11923380 | None:intergenic | 45.0% | |
| !!! | AAGAGTGCTCCTTTTACGAG+AGG | + | chr8_3:11923905-11923924 | None:intergenic | 45.0% |
| GTAGGGTTCGAATAAGCTCT+TGG | + | chr8_3:11924135-11924154 | None:intergenic | 45.0% | |
| !!! | AGTACTGGTTTTCCCTGTTG+TGG | + | chr8_3:11924379-11924398 | None:intergenic | 45.0% |
| AACAGGGAAAACCAGTACTG+TGG | - | chr8_3:11924380-11924399 | Msa1276940:intron | 45.0% | |
| GAATCAAGCTTCCACAGTAC+TGG | + | chr8_3:11924394-11924413 | None:intergenic | 45.0% | |
| TGAACTAAACTCAGAGCTGC+CGG | + | chr8_3:11924671-11924690 | None:intergenic | 45.0% | |
| CAGGCAAGTTTATGCAGGAA+TGG | - | chr8_3:11925314-11925333 | Msa1276940:intron | 45.0% | |
| AGTTTATGCAGGAATGGGCA+AGG | - | chr8_3:11925320-11925339 | Msa1276940:intron | 45.0% | |
| CTGCTCCAATTTCCTTGATG+TGG | - | chr8_3:11925398-11925417 | Msa1276940:intron | 45.0% | |
| CCAGTCCACATCAAGGAAAT+TGG | + | chr8_3:11925406-11925425 | None:intergenic | 45.0% | |
| CCAATTTCCTTGATGTGGAC+TGG | - | chr8_3:11925403-11925422 | Msa1276940:intron | 45.0% | |
| AAGAAAGCCAGTCCACATCA+AGG | + | chr8_3:11925413-11925432 | None:intergenic | 45.0% | |
| !!! | GAACGCAACTTTTGAGGTTC+AGG | + | chr8_3:11925699-11925718 | None:intergenic | 45.0% |
| GAGGCCTAAAGCAACTTCTT+AGG | - | chr8_3:11925889-11925908 | Msa1276940:intron | 45.0% | |
| ! | GTGGCCTAAGAAGTTGCTTT+AGG | + | chr8_3:11925896-11925915 | None:intergenic | 45.0% |
| GATGTGGAATTAGGAGGGAA+TGG | - | chr8_3:11926789-11926808 | Msa1276940:CDS | 45.0% | |
| ATAGGTCCAGATTCACTTGC+CGG | + | chr8_3:11927101-11927120 | None:intergenic | 45.0% | |
| !!! | AGATTTTTTTTTTTTTTTTA+TGG | - | chr8_3:11918241-11918260 | Msa1276940:intron | 5.0% |
| !!! | TATTATTATTATTTTTCAAA+CGG | + | chr8_3:11919848-11919867 | None:intergenic | 5.0% |
| ! | AGTGCTGCTGGTGTTGAAGT+TGG | - | chr8_3:11917893-11917912 | Msa1276940:intron | 50.0% |
| ATCCATCCAGGTTACCTGCT+TGG | - | chr8_3:11918396-11918415 | Msa1276940:intron | 50.0% | |
| TTCAAGCCAAGCAGGTAACC+TGG | + | chr8_3:11918405-11918424 | None:intergenic | 50.0% | |
| ACATTGCGCACTTGCGACAA+GGG | + | chr8_3:11919325-11919344 | None:intergenic | 50.0% | |
| ! | ATGCTGAAGCGTCTACAGGA+TGG | - | chr8_3:11919693-11919712 | Msa1276940:intron | 50.0% |
| GCGTCTACAGGATGGAAACT+TGG | - | chr8_3:11919701-11919720 | Msa1276940:intron | 50.0% | |
| ATGGAAACTTGGCCACAGGA+GGG | - | chr8_3:11919712-11919731 | Msa1276940:intron | 50.0% | |
| TTACCATTGCTAGGCGCTCA+CGG | - | chr8_3:11921337-11921356 | Msa1276940:CDS | 50.0% | |
| TCAGTTCTGTGGTGCAGATC+CGG | - | chr8_3:11921773-11921792 | Msa1276940:intron | 50.0% | |
| ! | GGGGTTCAATCCCTCTCTTT+TGG | - | chr8_3:11921794-11921813 | Msa1276940:intron | 50.0% |
| GCTTCCTGAGACCAAAAGAG+AGG | + | chr8_3:11921808-11921827 | None:intergenic | 50.0% | |
| !! | GGACTCATGTTTGGTGTCAC+TGG | + | chr8_3:11922784-11922803 | None:intergenic | 50.0% |
| GACACCAAACATGAGTCCAG+AGG | - | chr8_3:11922786-11922805 | Msa1276940:intron | 50.0% | |
| CCAATTGTGGTTGCCACAGA+TGG | + | chr8_3:11922929-11922948 | None:intergenic | 50.0% | |
| CCATCTGTGGCAACCACAAT+TGG | - | chr8_3:11922926-11922945 | Msa1276940:CDS | 50.0% | |
| GACGCCAGCTACATGCATTT+GGG | - | chr8_3:11923250-11923269 | Msa1276940:intron | 50.0% | |
| ACTTGGCAACCCTTTGGCAA+AGG | - | chr8_3:11923296-11923315 | Msa1276940:intron | 50.0% | |
| AAAGGCTAATGTGTCGCCCA+TGG | + | chr8_3:11923343-11923362 | None:intergenic | 50.0% | |
| TAGAGGTCAATGGAAGGCAG+CGG | - | chr8_3:11924102-11924121 | Msa1276940:intron | 50.0% | |
| TATTTCGATCTGTCCGCAGC+CGG | - | chr8_3:11924649-11924668 | Msa1276940:CDS | 50.0% | |
| TCAGATGAGTACGGACAGTC+TGG | + | chr8_3:11925100-11925119 | None:intergenic | 50.0% | |
| GCTGGAACCGCTTCTCATTT+AGG | + | chr8_3:11925531-11925550 | None:intergenic | 50.0% | |
| TCACAGCCAGCACAAGCATT+AGG | + | chr8_3:11925918-11925937 | None:intergenic | 50.0% | |
| ! | ACTGCTGGCTAGGCAACAAA+AGG | + | chr8_3:11926153-11926172 | None:intergenic | 50.0% |
| TTGCCTAGCCAGCAGTACAT+CGG | - | chr8_3:11926157-11926176 | Msa1276940:intron | 50.0% | |
| !! | GCTGGTGTTGAAGTTGGTGC+TGG | - | chr8_3:11917899-11917918 | Msa1276940:intron | 55.0% |
| AGCCAAGCAGGTAACCTGGA+TGG | + | chr8_3:11918401-11918420 | None:intergenic | 55.0% | |
| CACATTGCGCACTTGCGACA+AGG | + | chr8_3:11919326-11919345 | None:intergenic | 55.0% | |
| CAGGATGGAAACTTGGCCAC+AGG | - | chr8_3:11919708-11919727 | Msa1276940:intron | 55.0% | |
| GATGGAAACTTGGCCACAGG+AGG | - | chr8_3:11919711-11919730 | Msa1276940:intron | 55.0% | |
| TCCAGGGTTCACATGGGAGA+CGG | - | chr8_3:11920595-11920614 | Msa1276940:intron | 55.0% | |
| CAGTTCTGTGGTGCAGATCC+GGG | - | chr8_3:11921774-11921793 | Msa1276940:intron | 55.0% | |
| AGTTCTGTGGTGCAGATCCG+GGG | - | chr8_3:11921775-11921794 | Msa1276940:intron | 55.0% | |
| GACGCCTGATTGAACCGTCT+TGG | + | chr8_3:11923157-11923176 | None:intergenic | 55.0% | |
| CGGTTCAATCAGGCGTCTTG+AGG | - | chr8_3:11923160-11923179 | Msa1276940:intron | 55.0% | |
| GCTTATGGACTCGTCGCACT+AGG | - | chr8_3:11923228-11923247 | Msa1276940:intron | 55.0% | |
| GGACGCCAGCTACATGCATT+TGG | - | chr8_3:11923249-11923268 | Msa1276940:intron | 55.0% | |
| GGGCATTTCCAGCCACAACA+GGG | - | chr8_3:11924364-11924383 | Msa1276940:intron | 55.0% | |
| !! | CTGGTTTTCCCTGTTGTGGC+TGG | + | chr8_3:11924375-11924394 | None:intergenic | 55.0% |
| AGGCCACCTAATGCTTGTGC+TGG | - | chr8_3:11925909-11925928 | Msa1276940:intron | 55.0% | |
| CAGCCAGCACAAGCATTAGG+TGG | + | chr8_3:11925915-11925934 | None:intergenic | 55.0% | |
| TGCCTAGCCAGCAGTACATC+GGG | - | chr8_3:11926158-11926177 | Msa1276940:intron | 55.0% | |
| ! | TTCCCGATGTACTGCTGGCT+AGG | + | chr8_3:11926163-11926182 | None:intergenic | 55.0% |
| AAGGCTTCCCGATGTACTGC+TGG | + | chr8_3:11926168-11926187 | None:intergenic | 55.0% | |
| ! | AAGGTGGGGACAAGTGCTGC+TGG | - | chr8_3:11917881-11917900 | Msa1276940:intron | 60.0% |
| GCGACGTTGCACGTCATGCA+TGG | + | chr8_3:11919297-11919316 | None:intergenic | 60.0% | |
| GGGTTCTGCAGCGCACAACA+AGG | - | chr8_3:11923371-11923390 | Msa1276940:intron | 60.0% | |
| ! | GGGGCATTTCCAGCCACAAC+AGG | - | chr8_3:11924363-11924382 | Msa1276940:intron | 60.0% |
| ! | AAACTCAGAGCTGCCGGCTG+CGG | + | chr8_3:11924665-11924684 | None:intergenic | 60.0% |
| !! | GAGGTGCCGGCAAGTGAATC+TGG | - | chr8_3:11927092-11927111 | Msa1276940:five_prime_UTR | 60.0% |
| GCCGTCTCCCATGTGAACCC+TGG | + | chr8_3:11920599-11920618 | None:intergenic | 65.0% | |
| GTGCCGTGAGCGCCTAGCAA+TGG | + | chr8_3:11921343-11921362 | None:intergenic | 65.0% | |
| AGGCGCTCACGGCACTATGC+TGG | - | chr8_3:11921348-11921367 | Msa1276940:CDS | 65.0% | |
| GGCGCTCACGGCACTATGCT+GGG | - | chr8_3:11921349-11921368 | Msa1276940:CDS | 65.0% | |
| CACGGCACTATGCTGGGACC+AGG | - | chr8_3:11921355-11921374 | Msa1276940:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 11917404 | 11927281 | 11917404 | ID=Msa1276940;Name=Msa1276940 |
| chr8_3 | mRNA | 11917404 | 11927281 | 11917404 | ID=Msa1276940-mRNA-1;Parent=Msa1276940;Name=Msa1276940-mRNA-1;_AED=0.18;_eAED=0.18;_QI=456|0.8|0.81|1|1|1|16|136|825 |
| chr8_3 | exon | 11917404 | 11917639 | 11917404 | ID=Msa1276940-mRNA-1:exon:4849;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11919216 | 11919368 | 11919216 | ID=Msa1276940-mRNA-1:exon:4848;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11919494 | 11919664 | 11919494 | ID=Msa1276940-mRNA-1:exon:4847;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11920215 | 11920328 | 11920215 | ID=Msa1276940-mRNA-1:exon:4846;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11920476 | 11920597 | 11920476 | ID=Msa1276940-mRNA-1:exon:4845;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11921293 | 11921662 | 11921293 | ID=Msa1276940-mRNA-1:exon:4844;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11921852 | 11921998 | 11921852 | ID=Msa1276940-mRNA-1:exon:4843;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11922105 | 11922202 | 11922105 | ID=Msa1276940-mRNA-1:exon:4842;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11922313 | 11922410 | 11922313 | ID=Msa1276940-mRNA-1:exon:4841;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11922826 | 11923013 | 11922826 | ID=Msa1276940-mRNA-1:exon:4840;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11923309 | 11923385 | 11923309 | ID=Msa1276940-mRNA-1:exon:4839;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11923695 | 11923920 | 11923695 | ID=Msa1276940-mRNA-1:exon:4838;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11924239 | 11924352 | 11924239 | ID=Msa1276940-mRNA-1:exon:4837;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11924615 | 11924780 | 11924615 | ID=Msa1276940-mRNA-1:exon:4836;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11924917 | 11925121 | 11924917 | ID=Msa1276940-mRNA-1:exon:4835;Parent=Msa1276940-mRNA-1 |
| chr8_3 | exon | 11926697 | 11927281 | 11926697 | ID=Msa1276940-mRNA-1:exon:4834;Parent=Msa1276940-mRNA-1 |
| chr8_3 | five_prime_UTR | 11926826 | 11927281 | 11926826 | ID=Msa1276940-mRNA-1:five_prime_utr;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11926697 | 11926825 | 11926697 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11924917 | 11925121 | 11924917 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11924615 | 11924780 | 11924615 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11924239 | 11924352 | 11924239 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11923695 | 11923920 | 11923695 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11923309 | 11923385 | 11923309 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11922826 | 11923013 | 11922826 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11922313 | 11922410 | 11922313 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11922105 | 11922202 | 11922105 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11921852 | 11921998 | 11921852 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11921293 | 11921662 | 11921293 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11920476 | 11920597 | 11920476 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11920215 | 11920328 | 11920215 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11919494 | 11919664 | 11919494 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11919216 | 11919368 | 11919216 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | CDS | 11917540 | 11917639 | 11917540 | ID=Msa1276940-mRNA-1:cds;Parent=Msa1276940-mRNA-1 |
| chr8_3 | three_prime_UTR | 11917404 | 11917539 | 11917404 | ID=Msa1276940-mRNA-1:three_prime_utr;Parent=Msa1276940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
