AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175130 MtrunA17_Chr8g0345201 95.229 524 8 1 1 507 1 524 0.0 1032
Msa1175130 MtrunA17_Chr5g0412871 48.101 474 234 4 44 507 3 474 2.98e-158 458
Msa1175130 MtrunA17_Chr6g0488041 22.911 371 258 14 132 497 86 433 8.81e-18 85.9
Msa1175130 MtrunA17_Chr8g0387481 23.077 351 243 12 141 486 94 422 1.30e-17 85.5
Msa1175130 MtrunA17_Chr8g0360241 21.965 346 218 9 136 468 77 383 2.73e-16 80.9
Msa1175130 MtrunA17_Chr8g0389311 22.642 371 259 14 132 497 78 425 1.91e-15 78.6
Msa1175130 MtrunA17_Chr8g0389321 22.642 371 259 14 132 497 78 425 1.91e-15 78.6
Msa1175130 MtrunA17_Chr6g0475681 21.271 362 258 12 137 494 183 521 6.13e-15 77.4
Msa1175130 MtrunA17_Chr2g0324801 22.515 342 219 11 137 468 46 351 9.99e-15 75.9
Msa1175130 MtrunA17_Chr7g0248681 21.833 371 262 12 132 497 84 431 3.93e-14 74.7
Msa1175130 MtrunA17_Chr5g0400831 22.193 374 265 12 132 497 77 432 2.04e-13 72.4
Msa1175130 MtrunA17_Chr8g0348351 23.881 335 230 11 165 497 119 430 3.03e-13 72.0
Msa1175130 MtrunA17_Chr3g0135251 24.026 308 207 12 163 465 109 394 5.70e-13 70.9
Msa1175130 MtrunA17_Chr5g0398431 21.922 333 237 11 163 494 178 488 8.06e-13 70.5
Msa1175130 MtrunA17_Chr4g0004131 25.948 343 194 15 137 468 64 357 1.17e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175130 AT1G72330.1 74.349 538 98 3 10 507 3 540 0.0 823
Msa1175130 AT1G72330.3 72.595 551 98 4 10 507 3 553 0.0 815
Msa1175130 AT1G17290.1 81.667 480 71 1 45 507 64 543 0.0 796
Msa1175130 AT1G72330.2 71.499 407 76 3 10 376 3 409 0.0 586
Msa1175130 AT1G70580.4 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1175130 AT1G70580.2 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1175130 AT1G70580.3 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1175130 AT1G70580.1 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1175130 AT1G23310.1 51.724 435 208 2 72 505 39 472 1.29e-159 462
Msa1175130 AT1G23310.2 52.736 402 188 2 72 472 39 439 3.76e-147 429
Msa1175130 AT1G62960.1 23.324 373 263 11 125 494 194 546 1.08e-19 92.8
Msa1175130 AT5G51690.2 23.784 370 253 15 137 501 25 370 1.18e-18 88.2
Msa1175130 AT5G51690.1 23.529 374 257 15 133 501 144 493 1.48e-18 89.0
Msa1175130 AT4G28410.1 23.864 352 240 9 118 468 87 411 2.22e-18 88.2
Msa1175130 AT2G24850.1 22.133 375 244 11 136 500 86 422 2.40e-18 87.8
Msa1175130 AT4G11280.1 24.185 368 253 12 141 504 97 442 2.57e-18 88.2
Msa1175130 AT4G28410.2 23.647 351 240 9 118 467 87 410 3.26e-18 87.4
Msa1175130 AT5G36160.1 22.016 377 263 11 125 500 68 414 3.62e-17 84.0
Msa1175130 AT4G28420.2 21.684 392 250 12 125 502 86 434 3.82e-17 84.3
Msa1175130 AT2G28815.1 46.154 104 24 3 401 504 63 134 3.50e-16 79.7
Msa1175130 AT2G20610.1 22.135 384 260 12 119 497 86 435 3.53e-16 81.3
Msa1175130 AT4G26200.1 21.693 378 266 13 130 500 89 443 3.74e-16 81.3
Msa1175130 AT5G53970.1 22.857 350 232 10 125 468 59 376 5.26e-16 80.5
Msa1175130 AT4G37770.1 23.342 377 252 13 132 497 77 427 6.37e-16 80.5
Msa1175130 AT4G23590.1 21.226 424 278 16 90 500 27 407 7.09e-16 80.1
Msa1175130 AT4G28420.1 21.905 315 199 9 125 425 86 367 8.45e-16 79.7
Msa1175130 AT3G61510.1 22.493 369 253 14 135 497 87 428 2.89e-15 78.6
Msa1175130 AT2G20610.2 21.937 351 238 10 119 464 86 405 2.95e-15 78.6
Msa1175130 AT4G08040.1 24.709 344 231 14 127 465 70 390 2.00e-14 75.9
Msa1175130 AT4G23600.1 21.066 394 256 16 90 469 27 379 3.23e-13 72.0
Msa1175130 AT3G49700.1 23.836 365 247 13 141 497 86 427 1.80e-12 69.7
Msa1175130 AT1G01480.1 21.978 364 261 11 141 500 94 438 5.39e-12 68.6
Msa1175130 AT4G23600.3 21.204 382 246 16 97 464 34 374 9.79e-12 67.0
Msa1175130 AT5G65800.1 22.727 374 258 13 132 497 77 427 1.40e-11 67.0
Msa1175130 AT1G01480.2 22.024 336 241 10 167 500 16 332 2.08e-11 66.2

Find 155 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGAAGGTTTGGTTCTTT+TGG 0.206185 8_1:-6404766 Msa1175130:CDS
CACCTGCCCTGTTGGATTGC+CGG 0.219208 8_1:+6404939 None:intergenic
TGCTCCTTCTGCTTTGTTGC+AGG 0.238077 8_1:+6403581 None:intergenic
ATTTCCATATCAGGGTATTC+AGG 0.251842 8_1:-6405873 Msa1175130:intron
ATGTGACTATCCTGCTCTTT+TGG 0.267249 8_1:-6406603 Msa1175130:CDS
CCTATCTTCTTGAGGTAATA+TGG 0.270115 8_1:+6402955 None:intergenic
ATTGTTGTTGTTCCTGGTTC+TGG 0.272343 8_1:-6403447 Msa1175130:CDS
GGCACACCCCTTAAATTTAT+AGG 0.275408 8_1:+6402842 None:intergenic
CCTCCGTTCTTTGTCTTCAA+TGG 0.279276 8_1:-6409186 Msa1175130:CDS
ACCTGCCCTGTTGGATTGCC+GGG 0.285128 8_1:+6404940 None:intergenic
GCACACCCCTTAAATTTATA+GGG 0.286667 8_1:+6402843 None:intergenic
GTTGTTCCTGGTTCTGGTTT+TGG 0.293635 8_1:-6403441 Msa1175130:CDS
TGGAAAGCGAGGAGGTTATA+TGG 0.296188 8_1:-6404158 Msa1175130:CDS
ACTGGAATTGTTGTTGTTCC+TGG 0.300917 8_1:-6403453 Msa1175130:CDS
AGTCCAAGGGCATCAGTGTT+AGG 0.320042 8_1:-6404981 Msa1175130:CDS
AAGTAAGCGTTTGCAATAGA+AGG 0.322961 8_1:+6403482 None:intergenic
TAGGCACCAGTTGCTCTTCC+AGG 0.325169 8_1:+6405989 None:intergenic
AATCCGCTGCAGACAGATTC+AGG 0.326102 8_1:-6409274 Msa1175130:CDS
TAAATTTGTTCCCTCACATC+TGG 0.331054 8_1:+6404118 None:intergenic
TCATTGTTAAATATATCAAT+TGG 0.341988 8_1:+6402820 None:intergenic
AAAGAGTGAAATTTCTTCTC+AGG 0.347700 8_1:+6404376 None:intergenic
GTTGCTTCATCAAGATAATA+TGG 0.353298 8_1:+6405054 None:intergenic
GATACGTCTCAACAATTCAT+AGG 0.375165 8_1:-6409425 None:intergenic
ATTGATATATTTAACAATGA+TGG 0.381889 8_1:-6402817 Msa1175130:three_prime_UTR
AGAAGCTTTAAACAAATTAG+AGG 0.385150 8_1:-6403610 Msa1175130:CDS
TTATTGTCTTTCAAGGTTCC+CGG 0.386428 8_1:-6402998 Msa1175130:intron
GTGAAACACAGGGTTTGTTC+AGG 0.393334 8_1:-6406574 Msa1175130:intron
TCTTGATGAAGCAACTGGTT+GGG 0.394854 8_1:-6405046 Msa1175130:CDS
TGTTTGGCATCAGGCTATCA+TGG 0.398247 8_1:-6404187 Msa1175130:intron
CTTGATGAAGCAACTGGTTG+GGG 0.405077 8_1:-6405045 Msa1175130:CDS
CGCTCAAAATATTAACCCTC+AGG 0.406784 8_1:-6409138 Msa1175130:intron
TTCCGCATTGTGTGGTGTGA+TGG 0.410100 8_1:+6409296 None:intergenic
TAGATAATTTACTGCAACAT+TGG 0.412151 8_1:-6406767 Msa1175130:CDS
TTGCAGCTCACCTGCCCTGT+TGG 0.421430 8_1:+6404931 None:intergenic
TGAGTAATTGCATCATCATA+TGG 0.423018 8_1:+6405635 None:intergenic
ATAAACCCCGGCAATCCAAC+AGG 0.423770 8_1:-6404946 Msa1175130:CDS
CAATACCTGACTATGACTAT+AGG 0.434197 8_1:+6405970 None:intergenic
CCATATTACCTCAAGAAGAT+AGG 0.434491 8_1:-6402955 Msa1175130:CDS
ATCTGTCAAGAAAATGTCAT+TGG 0.442497 8_1:+6405793 None:intergenic
CAGATCCCTGGAAGAGCAAC+TGG 0.442624 8_1:-6405995 Msa1175130:CDS
CGAGTCTTATGAGTCATTCA+TGG 0.442957 8_1:-6403821 Msa1175130:CDS
TATTATCTTGATGAAGCAAC+TGG 0.443419 8_1:-6405051 Msa1175130:CDS
TCATCAAACGAATGAGCATC+TGG 0.451967 8_1:+6407494 None:intergenic
TCGGATTCGCCTGCCTGAAA+AGG 0.452019 8_1:-6403544 Msa1175130:CDS
TTGATATATTTAACAATGAT+GGG 0.453381 8_1:-6402816 Msa1175130:three_prime_UTR
TTTCCATATCAGGGTATTCA+GGG 0.458818 8_1:-6405872 Msa1175130:intron
GGCTGCTGGCCTAGAGATTG+AGG 0.460510 8_1:+6406740 None:intergenic
GTTTGGCATCAGGCTATCAT+GGG 0.462803 8_1:-6404186 Msa1175130:intron
TTTATATATTGTGAGAAAGA+TGG 0.462970 8_1:+6409320 None:intergenic
ACCTCAAGAAGATAGGATTC+CGG 0.467686 8_1:-6402948 Msa1175130:CDS
AACACTGATGCCCTTGGACT+TGG 0.471424 8_1:+6404984 None:intergenic
AGAGTTCCATCAAAAGTTCA+TGG 0.472947 8_1:-6402906 Msa1175130:CDS
CTTTCAAGGTTCCCGGCACA+TGG 0.473583 8_1:-6402991 Msa1175130:intron
GTCAAGCGGGTGACAATGGC+CGG 0.476132 8_1:+6402929 None:intergenic
AAACAAGTGAACGGTTGAAA+AGG 0.477236 8_1:+6409249 None:intergenic
TACCCTCCATGGTGGCCAGC+TGG 0.480341 8_1:-6405548 Msa1175130:intron
GTATCTCGGTCCATGGGATA+CGG 0.483453 8_1:-6404346 Msa1175130:CDS
CAAATTGTGGATCAGATCCC+TGG 0.483599 8_1:-6406007 Msa1175130:CDS
CGTTTGCAATAGAAGGCATC+AGG 0.485052 8_1:+6403489 None:intergenic
GTCCAAGGGCATCAGTGTTA+GGG 0.485526 8_1:-6404980 Msa1175130:CDS
GAAATTTCACTCTTTCAAGA+AGG 0.487439 8_1:-6404368 Msa1175130:CDS
AGCCCTAACACTGATGCCCT+TGG 0.492947 8_1:+6404978 None:intergenic
AAATTTGTTCCCTCACATCT+GGG 0.493584 8_1:+6404119 None:intergenic
CATTGTTAAATATATCAATT+GGG 0.493845 8_1:+6402821 None:intergenic
TCCGCATTGTGTGGTGTGAT+GGG 0.493883 8_1:+6409297 None:intergenic
ATTACTCATTAGATCAGAAA+AGG 0.495437 8_1:-6405620 Msa1175130:CDS
CAAGAAGGTATCTCGGTCCA+TGG 0.500046 8_1:-6404353 Msa1175130:CDS
TCTTGCTGAGGAAAATCAAC+GGG 0.500346 8_1:-6404808 Msa1175130:CDS
CACCTAAAATGCCATGTGCC+GGG 0.501375 8_1:+6402980 None:intergenic
GGAGGTTATATGGAGGTGAC+TGG 0.502434 8_1:-6404148 Msa1175130:CDS
CTGATTCAATAGAGAGAGCT+TGG 0.502786 8_1:-6406030 Msa1175130:CDS
ATCTTGATGAAGCAACTGGT+TGG 0.502802 8_1:-6405047 Msa1175130:CDS
TGCAATAGCCGCTGGAATTG+AGG 0.504928 8_1:-6405840 Msa1175130:CDS
CTCTGTCAAGCGGGTGACAA+TGG 0.505154 8_1:+6402925 None:intergenic
AATCTTTGTTCTAACATCAC+TGG 0.506748 8_1:-6404079 Msa1175130:CDS
GACAAAGAACGGAGGGGAGA+AGG 0.507553 8_1:+6409194 None:intergenic
CCTGCCCTGTTGGATTGCCG+GGG 0.514783 8_1:+6404941 None:intergenic
ATCATTGTCGCCGTATCCCA+TGG 0.516207 8_1:+6404336 None:intergenic
TGGTGCCTATAGTCATAGTC+AGG 0.517915 8_1:-6405975 Msa1175130:intron
ACTCTTTCAAGAAGGTATCT+CGG 0.524240 8_1:-6404360 Msa1175130:CDS
ATTGGAAATCCTCAATCTCT+AGG 0.525521 8_1:-6406749 Msa1175130:CDS
TTTGATCATGAGTCCTCCTA+AGG 0.526622 8_1:-6404041 Msa1175130:intron
AAACGAATGAGCATCTGGAT+TGG 0.528171 8_1:+6407499 None:intergenic
ATCTGAACTCAAGAAGCAGT+TGG 0.529742 8_1:-6405013 Msa1175130:CDS
GAGCAATGTATCTGTTTCCT+CGG 0.534079 8_1:-6403563 Msa1175130:CDS
TAGAGAGGGTACTGAGGGAT+GGG 0.535149 8_1:+6405583 None:intergenic
AGAGAGAGCTTGGCAAATTG+TGG 0.538808 8_1:-6406020 Msa1175130:CDS
GCCACCATGGAGGGTAATTG+AGG 0.538881 8_1:+6405555 None:intergenic
TTACGTGATGCAATAGCCGC+TGG 0.539193 8_1:-6405848 Msa1175130:CDS
TTCCCTTGCTACGCGTGCAA+AGG 0.542143 8_1:-6403776 Msa1175130:intron
TAACCTTTGCACGCGTAGCA+AGG 0.548318 8_1:+6403773 None:intergenic
GAGGGAACAAATTTATAAAG+TGG 0.548832 8_1:-6404110 Msa1175130:CDS
GTAATTGAGGCTGAATAGAG+AGG 0.554085 8_1:+6405568 None:intergenic
AACCTTTGCACGCGTAGCAA+GGG 0.554367 8_1:+6403774 None:intergenic
TGAGTCATTCATGGCTGAGA+AGG 0.555179 8_1:-6403812 Msa1175130:CDS
TACCAGCTGGCCACCATGGA+GGG 0.557336 8_1:+6405546 None:intergenic
GTTGGAAGATGCCAAGTCCA+AGG 0.558140 8_1:-6404995 Msa1175130:CDS
AAAATGTCATTGGCATTACA+AGG 0.558712 8_1:+6405803 None:intergenic
TCAGCCTCAATTACCCTCCA+TGG 0.559522 8_1:-6405559 Msa1175130:CDS
GAAGCTTTAAACAAATTAGA+GGG 0.560738 8_1:-6403609 Msa1175130:CDS
TTGATGGAACTCTGTCAAGC+GGG 0.564338 8_1:+6402916 None:intergenic
TACCGACTTACCTTTGGAGA+CGG 0.565061 8_1:+6404291 None:intergenic
GGCAAAGGGTTAACCTTAGG+AGG 0.566598 8_1:+6404028 None:intergenic
GCACCTAAAATGCCATGTGC+CGG 0.567511 8_1:+6402979 None:intergenic
TTTGGACAAAAGTGAAACAC+AGG 0.570857 8_1:-6406585 Msa1175130:CDS
CACACCCCTTAAATTTATAG+GGG 0.578462 8_1:+6402844 None:intergenic
AGGCACCAGTTGCTCTTCCA+GGG 0.581572 8_1:+6405990 None:intergenic
AAACGCTTACTTAATGCCAC+TGG 0.581835 8_1:-6403471 Msa1175130:CDS
TCAGGCTATCATGGGGAGTG+TGG 0.583981 8_1:-6404178 Msa1175130:intron
GTTACATGATGAAAGAAACT+AGG 0.589250 8_1:-6402714 Msa1175130:three_prime_UTR
AAGAACGGAGGGGAGAAGGA+TGG 0.591969 8_1:+6409198 None:intergenic
ATAGAGAGGGTACTGAGGGA+TGG 0.592245 8_1:+6405582 None:intergenic
AAGAAGGTATCTCGGTCCAT+GGG 0.592457 8_1:-6404352 Msa1175130:CDS
ACTTTACCAGCTGGCCACCA+TGG 0.594947 8_1:+6405542 None:intergenic
GAGGTTATATGGAGGTGACT+GGG 0.595186 8_1:-6404147 Msa1175130:CDS
AGATGCTCATTCGTTTGATG+AGG 0.599601 8_1:-6407492 Msa1175130:intron
CATTGAAGACAAAGAACGGA+GGG 0.602118 8_1:+6409187 None:intergenic
GTAACCTGCAACAAAGCAGA+AGG 0.602222 8_1:-6403585 Msa1175130:CDS
GAGTCATTCATGGCTGAGAA+GGG 0.602471 8_1:-6403811 Msa1175130:CDS
GCTTTAGCTGTTATAAACCC+CGG 0.604551 8_1:-6404958 Msa1175130:CDS
CTCATTAGATCAGAAAAGGA+TGG 0.606155 8_1:-6405616 Msa1175130:CDS
GCCGGAATCCTATCTTCTTG+AGG 0.606322 8_1:+6402947 None:intergenic
AAGCCATTGAAGACAAAGAA+CGG 0.607033 8_1:+6409183 None:intergenic
CTGAATAGAGAGGGTACTGA+GGG 0.609191 8_1:+6405578 None:intergenic
CATGGGGAGTGTGGAAAGCG+AGG 0.612956 8_1:-6404169 Msa1175130:CDS
TTTGATGGAACTCTGTCAAG+CGG 0.614854 8_1:+6402915 None:intergenic
TTGGAAGATGCCAAGTCCAA+GGG 0.616464 8_1:-6404994 Msa1175130:CDS
TTCTTGCTGAGGAAAATCAA+CGG 0.620444 8_1:-6404809 Msa1175130:CDS
ACCTGTCCAAAACCAGAACC+AGG 0.621813 8_1:+6403435 None:intergenic
GCTGAATAGAGAGGGTACTG+AGG 0.624000 8_1:+6405577 None:intergenic
CAGCGGATTTCCGCATTGTG+TGG 0.629122 8_1:+6409288 None:intergenic
GCAATAGAAGGCATCAGGTG+CGG 0.630196 8_1:+6403494 None:intergenic
GCTGGAATTGAGGAGCGCGA+TGG 0.630272 8_1:-6405830 Msa1175130:CDS
GTGCCTGAATCTGTCTGCAG+CGG 0.634809 8_1:+6409271 None:intergenic
AAAGGCTATCAAAGCTGCAG+AGG 0.637012 8_1:-6403526 Msa1175130:CDS
TTACCAGCTGGCCACCATGG+AGG 0.637475 8_1:+6405545 None:intergenic
TAATTGAGGCTGAATAGAGA+GGG 0.644456 8_1:+6405569 None:intergenic
AATTTGTTCCCTCACATCTG+GGG 0.645832 8_1:+6404120 None:intergenic
ACCCATCACACCACACAATG+CGG 0.649029 8_1:-6409298 Msa1175130:exon
ACACCCCTTAAATTTATAGG+GGG 0.654945 8_1:+6402845 None:intergenic
TTTGGCATCAGGCTATCATG+GGG 0.665460 8_1:-6404185 Msa1175130:intron
CCATTGAAGACAAAGAACGG+AGG 0.677733 8_1:+6409186 None:intergenic
AAAGCGAGGAGGTTATATGG+AGG 0.681303 8_1:-6404155 Msa1175130:CDS
TTGATGAAGCAACTGGTTGG+GGG 0.682358 8_1:-6405044 Msa1175130:CDS
TTGGACAAAAGTGAAACACA+GGG 0.683072 8_1:-6406584 Msa1175130:CDS
GCCTCAATTACCCTCCATGG+TGG 0.683447 8_1:-6405556 Msa1175130:CDS
TAAACCCCGGCAATCCAACA+GGG 0.689339 8_1:-6404945 Msa1175130:CDS
AGGAACAACAACAATTCCAG+TGG 0.692125 8_1:+6403455 None:intergenic
GGGGAGTGTGGAAAGCGAGG+AGG 0.694971 8_1:-6404166 Msa1175130:CDS
ATGTCTGTAGGTTCTTGCTG+AGG 0.696225 8_1:-6404820 Msa1175130:intron
TTAAGGACAGAAAAGAACAG+AGG 0.697261 8_1:+6402590 None:intergenic
ATTGAAGACAAAGAACGGAG+GGG 0.701204 8_1:+6409188 None:intergenic
ATCGCGCTCCTCAATTCCAG+CGG 0.721398 8_1:+6405832 None:intergenic
TGCGAAGTTGAAAAGTAACG+TGG 0.724434 8_1:+6409356 None:intergenic
GCGAAGTTGAAAAGTAACGT+GGG 0.752268 8_1:+6409357 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAATTTTTCTTTAAG+AGG + chr8_1:6408009-6408028 None:intergenic 10.0%
!!! CTTAAAGAAAAATTTATTTT+TGG - chr8_1:6408009-6408028 Msa1175130:intron 10.0%
!!! ATTAGTTTATAATCAATAAA+AGG + chr8_1:6408982-6409001 None:intergenic 10.0%
!! AAAAACAAAAAACAACAAAA+CGG + chr8_1:6402957-6402976 None:intergenic 15.0%
!!! TTTTGTTGTTTTTTGTTTTT+AGG - chr8_1:6402957-6402976 Msa1175130:CDS 15.0%
!! AAAACAAAAAACAACAAAAA+GGG + chr8_1:6403093-6403112 None:intergenic 15.0%
!! AAAAACAAAAAACAACAAAA+AGG + chr8_1:6402957-6402976 None:intergenic 15.0%
!!! CTTTTTCAATTTTTTTATGT+GGG - chr8_1:6403141-6403160 Msa1175130:intron 15.0%
!! AAAACAAAAAATAACAATCA+AGG + chr8_1:6403345-6403364 None:intergenic 15.0%
!!! GATTGTTATTTTTTGTTTTT+AGG - chr8_1:6403346-6403365 Msa1175130:intron 15.0%
!! CAAACAAACTTATAAATTAA+GGG + chr8_1:6403483-6403502 None:intergenic 15.0%
!! ACAAACAAACTTATAAATTA+AGG + chr8_1:6403484-6403503 None:intergenic 15.0%
!!! GTATTTGGTTTTTTTATTAT+CGG - chr8_1:6404576-6404595 Msa1175130:intron 15.0%
!!! TATTTGGTTTTTTTATTATC+GGG - chr8_1:6404577-6404596 Msa1175130:intron 15.0%
!! TAATTTATAAAGACAATAAG+AGG + chr8_1:6405920-6405939 None:intergenic 15.0%
!!! GTTTATCATATTTGATAATA+TGG - chr8_1:6407160-6407179 Msa1175130:intron 15.0%
!!! AGAAAATTTTACACTAATAT+TGG - chr8_1:6408866-6408885 Msa1175130:intron 15.0%
!! ATATTTACTTACAATTTCAT+TGG + chr8_1:6408892-6408911 None:intergenic 15.0%
!! ATTTAAATTATTGTCTTTCA+AGG - chr8_1:6409008-6409027 Msa1175130:intron 15.0%
!! CATTGTTAAATATATCAATT+GGG + chr8_1:6409195-6409214 None:intergenic 15.0%
!! TCATTGTTAAATATATCAAT+TGG + chr8_1:6409196-6409215 None:intergenic 15.0%
!! ATTGATATATTTAACAATGA+TGG - chr8_1:6409196-6409215 Msa1175130:CDS 15.0%
!! TTGATATATTTAACAATGAT+GGG - chr8_1:6409197-6409216 Msa1175130:CDS 15.0%
!! TTTATATATTGTGAGAAAGA+TGG + chr8_1:6402696-6402715 None:intergenic 20.0%
!! AAAACAAAAAACAACAAAAC+GGG + chr8_1:6402956-6402975 None:intergenic 20.0%
!!! GCTTTTTCAATTTTTTTATG+TGG - chr8_1:6403140-6403159 Msa1175130:intron 20.0%
!!! CAACTTTTGATTGAATTATT+GGG - chr8_1:6403296-6403315 Msa1175130:intron 20.0%
!!! AACTTTTGATTGAATTATTG+GGG - chr8_1:6403297-6403316 Msa1175130:intron 20.0%
!!! TTATTTTTTGTTTTTAGGTG+TGG - chr8_1:6403351-6403370 Msa1175130:intron 20.0%
!!! TAAGCTTTTTATTGAATTAG+TGG - chr8_1:6403551-6403570 Msa1175130:CDS 20.0%
!!! AAGCTTTTTATTGAATTAGT+GGG - chr8_1:6403552-6403571 Msa1175130:CDS 20.0%
!!! AATTAGTGGGTTTTTAATTT+TGG - chr8_1:6403565-6403584 Msa1175130:CDS 20.0%
!!! ATTAGTGGGTTTTTAATTTT+GGG - chr8_1:6403566-6403585 Msa1175130:CDS 20.0%
!!! TTTTAATTTTGGGGTTTATA+AGG - chr8_1:6403576-6403595 Msa1175130:CDS 20.0%
!!! TTTAATTTTGGGGTTTATAA+GGG - chr8_1:6403577-6403596 Msa1175130:CDS 20.0%
!!! AAAACAGTTTTGTTAAATTG+CGG - chr8_1:6404183-6404202 Msa1175130:intron 20.0%
!! TACTAAGTTTCTAATTATAG+TGG - chr8_1:6405492-6405511 Msa1175130:intron 20.0%
!!! ACTATCATTTCTCTATTTTT+AGG - chr8_1:6406354-6406373 Msa1175130:intron 20.0%
!!! CGCAAATCATAATTTAATTT+AGG - chr8_1:6406511-6406530 Msa1175130:intron 20.0%
!! AGAATACAAATCAGAAAAAA+TGG - chr8_1:6406775-6406794 Msa1175130:intron 20.0%
!! ATTTGAACAAACCATTATTT+CGG - chr8_1:6407499-6407518 Msa1175130:CDS 20.0%
!!! ATTTTTTTGTTGAAACCATA+TGG - chr8_1:6407548-6407567 Msa1175130:intron 20.0%
!! GTAAAACTCAATATCAAATT+AGG + chr8_1:6408123-6408142 None:intergenic 20.0%
!! TAATGTATAAAAGAATTGCT+AGG + chr8_1:6408270-6408289 None:intergenic 20.0%
!! TGTAATTACTTTACTGTTTA+TGG + chr8_1:6408304-6408323 None:intergenic 20.0%
!! CAATGCATTTACAAATAAAT+CGG + chr8_1:6408615-6408634 None:intergenic 20.0%
!! ATAATTGTAGATAAAATGAG+AGG + chr8_1:6408671-6408690 None:intergenic 20.0%
!!! TCTCATTTTATCTACAATTA+TGG - chr8_1:6408670-6408689 Msa1175130:intron 20.0%
!!! TAAAATCTTTTAAAAGTCAC+TGG + chr8_1:6408784-6408803 None:intergenic 20.0%
! TAAAAAAACACAAAACCTGA+GGG + chr8_1:6402893-6402912 None:intergenic 25.0%
! ATAAAAAAACACAAAACCTG+AGG + chr8_1:6402894-6402913 None:intergenic 25.0%
! ACTGAAAAACAAGAATCAAA+GGG + chr8_1:6402919-6402938 None:intergenic 25.0%
!!! TCGATTATTTGATTTGATGT+AGG - chr8_1:6403009-6403028 Msa1175130:intron 25.0%
! CCAATAATTCAATCAAAAGT+TGG + chr8_1:6403298-6403317 None:intergenic 25.0%
!!! CCAACTTTTGATTGAATTAT+TGG - chr8_1:6403295-6403314 Msa1175130:intron 25.0%
!!! ACTTTTGATTGAATTATTGG+GGG - chr8_1:6403298-6403317 Msa1175130:intron 25.0%
!! TTGAACTTTCAGTTTTTGAT+TGG - chr8_1:6403388-6403407 Msa1175130:intron 25.0%
!!! TGAACTTTCAGTTTTTGATT+GGG - chr8_1:6403389-6403408 Msa1175130:intron 25.0%
! ATGCTTCTGTAATTACATAA+GGG - chr8_1:6403434-6403453 Msa1175130:intron 25.0%
!! TGTAATTACATAAGGGTTTT+GGG - chr8_1:6403441-6403460 Msa1175130:CDS 25.0%
!!! TTAGTGGGTTTTTAATTTTG+GGG - chr8_1:6403567-6403586 Msa1175130:CDS 25.0%
!! TGTAGTTTTTGCTAAAATTG+TGG - chr8_1:6403870-6403889 Msa1175130:intron 25.0%
! CGACAAAAACTATTCTTTAT+TGG - chr8_1:6403988-6404007 Msa1175130:intron 25.0%
!!! TTGGTGAAGTATTATGTTTT+TGG - chr8_1:6404007-6404026 Msa1175130:intron 25.0%
!!! TGGTGAAGTATTATGTTTTT+GGG - chr8_1:6404008-6404027 Msa1175130:intron 25.0%
!!! ATTTTGAATCAGTGTTTTGA+TGG + chr8_1:6404319-6404338 None:intergenic 25.0%
! TGACAAATTAAATTGTTACG+TGG - chr8_1:6404746-6404765 Msa1175130:intron 25.0%
! GATAACATGTTATATCTACA+AGG + chr8_1:6404892-6404911 None:intergenic 25.0%
! TAGCATGTTGTTATATAGAT+TGG + chr8_1:6404938-6404957 None:intergenic 25.0%
!! TTCTACACTGATTGATAAAT+AGG + chr8_1:6404986-6405005 None:intergenic 25.0%
! TAGATAATTTACTGCAACAT+TGG - chr8_1:6405246-6405265 Msa1175130:intron 25.0%
!! TTGTTTCTTACAATTCTGTA+TGG - chr8_1:6405317-6405336 Msa1175130:intron 25.0%
!!! CAATTACAATTTTGATACTG+TGG + chr8_1:6405579-6405598 None:intergenic 25.0%
!! CATTTTTACAATGTTGTACT+CGG - chr8_1:6405629-6405648 Msa1175130:CDS 25.0%
!! TCTTTTGTTACTGATGATTT+TGG - chr8_1:6405667-6405686 Msa1175130:intron 25.0%
! ACTTTGTACTAAATAGTGTA+TGG + chr8_1:6405791-6405810 None:intergenic 25.0%
!! AAATTATGTTTTTCCTAGTG+TGG - chr8_1:6405934-6405953 Msa1175130:intron 25.0%
! ATTGATTGGGTTATCTAATT+TGG - chr8_1:6406062-6406081 Msa1175130:intron 25.0%
! GAAAATTATCGAAAGCAAAT+TGG + chr8_1:6406269-6406288 None:intergenic 25.0%
! ATTACTCATTAGATCAGAAA+AGG - chr8_1:6406393-6406412 Msa1175130:intron 25.0%
! AAATCAGAAAAAATGGTCTA+TGG - chr8_1:6406782-6406801 Msa1175130:intron 25.0%
!! GTTACTTTGAAAATCTTAGT+TGG - chr8_1:6406868-6406887 Msa1175130:intron 25.0%
!! GAGCTATGCTTTTATATTAT+GGG - chr8_1:6406890-6406909 Msa1175130:intron 25.0%
!! AGCTATGCTTTTATATTATG+GGG - chr8_1:6406891-6406910 Msa1175130:intron 25.0%
!!! GATTTTGTTATTGTTTCTGA+AGG - chr8_1:6406934-6406953 Msa1175130:intron 25.0%
!! TTACAATGGAGTGTTAATAT+AGG - chr8_1:6407106-6407125 Msa1175130:intron 25.0%
! TACAAAATATCCTCAAATAG+CGG - chr8_1:6407457-6407476 Msa1175130:intron 25.0%
!! GACTTTTATGTTATGCTAAT+AGG - chr8_1:6407777-6407796 Msa1175130:intron 25.0%
!!! ATTTTTCTTTAAGAGGCAAA+GGG + chr8_1:6408002-6408021 None:intergenic 25.0%
!!! AATTTTTCTTTAAGAGGCAA+AGG + chr8_1:6408003-6408022 None:intergenic 25.0%
!! GGTTATAATTCTTCATTTTG+TGG - chr8_1:6408030-6408049 Msa1175130:intron 25.0%
! TTCTGAATTTACTCATTGTT+GGG + chr8_1:6408343-6408362 None:intergenic 25.0%
! TTTCTGAATTTACTCATTGT+TGG + chr8_1:6408344-6408363 None:intergenic 25.0%
!!! AGAAGCTTTAAACAAATTAG+AGG - chr8_1:6408403-6408422 Msa1175130:intron 25.0%
!!! GAAGCTTTAAACAAATTAGA+GGG - chr8_1:6408404-6408423 Msa1175130:intron 25.0%
!!! GTATTGACAACTTTGTTTTT+TGG - chr8_1:6408718-6408737 Msa1175130:intron 25.0%
!! TTTTTCCCCCTATAAATTTA+AGG - chr8_1:6409163-6409182 Msa1175130:CDS 25.0%
!! TTTTCCCCCTATAAATTTAA+GGG - chr8_1:6409164-6409183 Msa1175130:CDS 25.0%
!! TAATATTTTGAGCGGTAACA+GGG + chr8_1:6402869-6402888 None:intergenic 30.0%
!! TTAATATTTTGAGCGGTAAC+AGG + chr8_1:6402870-6402889 None:intergenic 30.0%
CACTGAAAAACAAGAATCAA+AGG + chr8_1:6402920-6402939 None:intergenic 30.0%
!!! CTTTGATTCTTGTTTTTCAG+TGG - chr8_1:6402918-6402937 Msa1175130:CDS 30.0%
ATGCTTCTGTGATTACATAA+GGG - chr8_1:6403185-6403204 Msa1175130:intron 30.0%
!!! TTACATAAGGGTTTTGGATT+TGG - chr8_1:6403197-6403216 Msa1175130:intron 30.0%
ATTTGCATGCAAAATTGATG+TGG - chr8_1:6403258-6403277 Msa1175130:intron 30.0%
!! GAACTTTCAGTTTTTGATTG+GGG - chr8_1:6403390-6403409 Msa1175130:intron 30.0%
GATGCTTCTGTAATTACATA+AGG - chr8_1:6403433-6403452 Msa1175130:intron 30.0%
! CTGTAATTACATAAGGGTTT+TGG - chr8_1:6403440-6403459 Msa1175130:CDS 30.0%
TTGTATGCAAAATTGATGTG+TGG - chr8_1:6403508-6403527 Msa1175130:CDS 30.0%
!!! CTGATCTTTTGTTTTTGCTT+TGG - chr8_1:6403639-6403658 Msa1175130:intron 30.0%
!! TTTTTGCTTTGGTTTCTGTT+TGG - chr8_1:6403650-6403669 Msa1175130:intron 30.0%
! TTTTGGCAAAAGACATGTTA+TGG - chr8_1:6403776-6403795 Msa1175130:intron 30.0%
! AGTTTTTGCTAAAATTGTGG+CGG - chr8_1:6403873-6403892 Msa1175130:intron 30.0%
GTGCATATACATGTTTAGAT+TGG + chr8_1:6403927-6403946 None:intergenic 30.0%
CTAAACATGTATATGCACTT+AGG - chr8_1:6403929-6403948 Msa1175130:intron 30.0%
!!! AATGGTTTTTTTTCCTGCTT+AGG - chr8_1:6404066-6404085 Msa1175130:CDS 30.0%
GACACAATCTTAGTATATAC+AGG + chr8_1:6404155-6404174 None:intergenic 30.0%
CATATTAGACAAGATGTGAA+GGG - chr8_1:6404241-6404260 Msa1175130:intron 30.0%
CATGTTTGTATGCAAATGTT+TGG - chr8_1:6404287-6404306 Msa1175130:intron 30.0%
! TTCAAAATTTTGTCCTGACT+TGG - chr8_1:6404331-6404350 Msa1175130:CDS 30.0%
!! ATATTCTACTCAAAGTACTG+TGG + chr8_1:6404391-6404410 None:intergenic 30.0%
TTCATATCTTCTGCAGTATT+TGG - chr8_1:6404561-6404580 Msa1175130:intron 30.0%
!!! TGGTTTTTTTATTATCGGGA+TGG - chr8_1:6404581-6404600 Msa1175130:intron 30.0%
ATGCTATAAAGCTTCTGATA+GGG - chr8_1:6404625-6404644 Msa1175130:intron 30.0%
CAGTGTAGAAGTTCAAAAAA+TGG - chr8_1:6404996-6405015 Msa1175130:CDS 30.0%
!! AATATACAGCTAGAAGTATC+TGG - chr8_1:6405037-6405056 Msa1175130:CDS 30.0%
GTATGAATGTGAATCTAACA+CGG - chr8_1:6405059-6405078 Msa1175130:CDS 30.0%
AATGTTGTGCTTCTATCTTT+CGG - chr8_1:6405094-6405113 Msa1175130:intron 30.0%
ATTGTAAGAAACAAACCTCT+CGG + chr8_1:6405311-6405330 None:intergenic 30.0%
!!! AATCTTAGTGGTTTTGTCTA+TGG - chr8_1:6405521-6405540 Msa1175130:intron 30.0%
CGAGTACAACATTGTAAAAA+TGG + chr8_1:6405631-6405650 None:intergenic 30.0%
TAATTAGTGTTGTCACATAG+AGG - chr8_1:6405706-6405725 Msa1175130:intron 30.0%
TTGTACTAAATAGTGTATGG+CGG + chr8_1:6405788-6405807 None:intergenic 30.0%
ACACTATTTAGTACAAAGTG+TGG - chr8_1:6405792-6405811 Msa1175130:CDS 30.0%
GCACTGCAAATATAAATGAA+AGG + chr8_1:6405964-6405983 None:intergenic 30.0%
TGGAAATATGAACAGTTTCA+TGG + chr8_1:6406127-6406146 None:intergenic 30.0%
ACTGTTCATATTTCCATATC+AGG - chr8_1:6406131-6406150 Msa1175130:intron 30.0%
CTGTTCATATTTCCATATCA+GGG - chr8_1:6406132-6406151 Msa1175130:intron 30.0%
AAAATGTCATTGGCATTACA+AGG + chr8_1:6406213-6406232 None:intergenic 30.0%
ATCTGTCAAGAAAATGTCAT+TGG + chr8_1:6406223-6406242 None:intergenic 30.0%
! AATGACATTTTCTTGACAGA+TGG - chr8_1:6406222-6406241 Msa1175130:intron 30.0%
TGAGTAATTGCATCATCATA+TGG + chr8_1:6406381-6406400 None:intergenic 30.0%
TAAAAGAAAACTTTACCAGC+TGG + chr8_1:6406483-6406502 None:intergenic 30.0%
TTCCAAATTATGCTATGCTT+TGG + chr8_1:6406610-6406629 None:intergenic 30.0%
! CTGATTTGTATTCTTGAAGA+TGG + chr8_1:6406769-6406788 None:intergenic 30.0%
AAAAAATGGTCTATGGTCTA+TGG - chr8_1:6406789-6406808 Msa1175130:intron 30.0%
ACAAATATGCATGCATCATT+GGG - chr8_1:6406833-6406852 Msa1175130:intron 30.0%
! GGAGCTATGCTTTTATATTA+TGG - chr8_1:6406889-6406908 Msa1175130:intron 30.0%
! TGCTTTTATATTATGGGGAT+TGG - chr8_1:6406896-6406915 Msa1175130:intron 30.0%
! TTTATATTATGGGGATTGGT+TGG - chr8_1:6406900-6406919 Msa1175130:intron 30.0%
GTTGCTTCATCAAGATAATA+TGG + chr8_1:6406962-6406981 None:intergenic 30.0%
TATTATCTTGATGAAGCAAC+TGG - chr8_1:6406962-6406981 Msa1175130:intron 30.0%
! GTAGAATTTTGCAAGAAAGA+AGG - chr8_1:6407233-6407252 Msa1175130:intron 30.0%
! ATTTTGCAAGAAAGAAGGTT+TGG - chr8_1:6407238-6407257 Msa1175130:intron 30.0%
CAAATTCTGATACACTATAG+TGG + chr8_1:6407402-6407421 None:intergenic 30.0%
ATAGAGAATTGCCGAAATAA+TGG + chr8_1:6407513-6407532 None:intergenic 30.0%
AAAGAGTGAAATTTCTTCTC+AGG + chr8_1:6407640-6407659 None:intergenic 30.0%
GAAATTTCACTCTTTCAAGA+AGG - chr8_1:6407645-6407664 Msa1175130:intron 30.0%
! CAAACAGAGACATTTTCAAT+CGG + chr8_1:6407812-6407831 None:intergenic 30.0%
GAGGGAACAAATTTATAAAG+TGG - chr8_1:6407903-6407922 Msa1175130:intron 30.0%
AATCTTTGTTCTAACATCAC+TGG - chr8_1:6407934-6407953 Msa1175130:intron 30.0%
AACACTAACCTCAATTAAGA+TGG - chr8_1:6408059-6408078 Msa1175130:intron 30.0%
TAACCTCAATTAAGATGGTT+TGG - chr8_1:6408064-6408083 Msa1175130:intron 30.0%
TACTTTACTGTTTATGGTTG+TGG + chr8_1:6408298-6408317 None:intergenic 30.0%
TTGTAGATAAAATGAGAGGA+TGG + chr8_1:6408667-6408686 None:intergenic 30.0%
! TGCGTGAATTATCTTGATTT+TGG - chr8_1:6408932-6408951 Msa1175130:intron 30.0%
GATTGAAAATGCAACTTAGT+AGG + chr8_1:6408960-6408979 None:intergenic 30.0%
TTTCCCCCTATAAATTTAAG+GGG - chr8_1:6409165-6409184 Msa1175130:CDS 30.0%
GTTACATGATGAAAGAAACT+AGG - chr8_1:6409299-6409318 Msa1175130:exon 30.0%
AAACAAGTGAACGGTTGAAA+AGG + chr8_1:6402767-6402786 None:intergenic 35.0%
!!! ACCGTTCACTTGTTTTTGTT+CGG - chr8_1:6402772-6402791 Msa1175130:three_prime_UTR 35.0%
TCCGAACAAAAACAAGTGAA+CGG + chr8_1:6402776-6402795 None:intergenic 35.0%
AAGCCATTGAAGACAAAGAA+CGG + chr8_1:6402833-6402852 None:intergenic 35.0%
!! CTGAGGGTTAATATTTTGAG+CGG + chr8_1:6402877-6402896 None:intergenic 35.0%
GATGCTTCTGTGATTACATA+AGG - chr8_1:6403184-6403203 Msa1175130:intron 35.0%
! CTGTGATTACATAAGGGTTT+TGG - chr8_1:6403191-6403210 Msa1175130:intron 35.0%
! ATTGGGGTTTTTGATCATGA+TGG - chr8_1:6403406-6403425 Msa1175130:intron 35.0%
ATTATAATGATGTGCGACTG+AGG - chr8_1:6403609-6403628 Msa1175130:CDS 35.0%
CGCACAAAAACAAAGCAAAA+AGG + chr8_1:6403733-6403752 None:intergenic 35.0%
AAAACTATTCACTGATCCCA+TGG + chr8_1:6403759-6403778 None:intergenic 35.0%
! TGGGATCAGTGAATAGTTTT+TGG - chr8_1:6403759-6403778 Msa1175130:intron 35.0%
! GCTTAGTGTATGTTTGAGTT+CGG - chr8_1:6403823-6403842 Msa1175130:CDS 35.0%
CAATGAGTTCAGCAAAATCA+CGG + chr8_1:6403903-6403922 None:intergenic 35.0%
CCTTCACATCTTGTCTAATA+TGG + chr8_1:6404243-6404262 None:intergenic 35.0%
CCATATTAGACAAGATGTGA+AGG - chr8_1:6404240-6404259 Msa1175130:intron 35.0%
TGCATACAAACATGTCATTG+CGG + chr8_1:6404281-6404300 None:intergenic 35.0%
!!! TTGAATCAGTGTTTTGATGG+CGG + chr8_1:6404316-6404335 None:intergenic 35.0%
TTTATGAAATGTGCCAAGTC+AGG + chr8_1:6404347-6404366 None:intergenic 35.0%
TTGCAAGTTCTGCAACATTA+AGG + chr8_1:6404481-6404500 None:intergenic 35.0%
! TTATCGGGATGGCTTTTAAA+AGG - chr8_1:6404592-6404611 Msa1175130:intron 35.0%
! GAAGCTTTATAGCATCATCA+TGG + chr8_1:6404620-6404639 None:intergenic 35.0%
GATGCTATAAAGCTTCTGAT+AGG - chr8_1:6404624-6404643 Msa1175130:intron 35.0%
!!! TAGTAGGCAGCCTTATTTTA+TGG - chr8_1:6404680-6404699 Msa1175130:intron 35.0%
TGGATCGTGTCCATAAAATA+AGG + chr8_1:6404693-6404712 None:intergenic 35.0%
TTTGTCACGATATATCCTAG+AGG + chr8_1:6404733-6404752 None:intergenic 35.0%
CTGAATAAAATCTATGCAGC+AGG + chr8_1:6405151-6405170 None:intergenic 35.0%
ATTGGAAATCCTCAATCTCT+AGG - chr8_1:6405264-6405283 Msa1175130:intron 35.0%
ACCTCTCGGAAAAAAGTAAT+TGG + chr8_1:6405297-6405316 None:intergenic 35.0%
! TTTTACAATCTCATCTCTGC+AGG - chr8_1:6405377-6405396 Msa1175130:intron 35.0%
TTTGGACAAAAGTGAAACAC+AGG - chr8_1:6405428-6405447 Msa1175130:intron 35.0%
TTGGACAAAAGTGAAACACA+GGG - chr8_1:6405429-6405448 Msa1175130:intron 35.0%
! TAGTGGATCAGTAATCTTAG+TGG - chr8_1:6405509-6405528 Msa1175130:intron 35.0%
! CTAATATTTTCCGTGATCCA+TGG - chr8_1:6405871-6405890 Msa1175130:intron 35.0%
AAAACCAATGTTGTCAACCA+TGG + chr8_1:6405891-6405910 None:intergenic 35.0%
CAATACCTGACTATGACTAT+AGG + chr8_1:6406046-6406065 None:intergenic 35.0%
!! AGTCATAGTCAGGTATTGAT+TGG - chr8_1:6406048-6406067 Msa1175130:intron 35.0%
!! GTCATAGTCAGGTATTGATT+GGG - chr8_1:6406049-6406068 Msa1175130:intron 35.0%
ATTACCCCTTTACTATTCAC+TGG - chr8_1:6406096-6406115 Msa1175130:intron 35.0%
TTACCCCTTTACTATTCACT+GGG - chr8_1:6406097-6406116 Msa1175130:intron 35.0%
! ATTTCCATATCAGGGTATTC+AGG - chr8_1:6406140-6406159 Msa1175130:intron 35.0%
! TTTCCATATCAGGGTATTCA+GGG - chr8_1:6406141-6406160 Msa1175130:intron 35.0%
CAAATTGGAAACATACTGCT+GGG + chr8_1:6406254-6406273 None:intergenic 35.0%
CTCATTAGATCAGAAAAGGA+TGG - chr8_1:6406397-6406416 Msa1175130:intron 35.0%
TAATTGAGGCTGAATAGAGA+GGG + chr8_1:6406447-6406466 None:intergenic 35.0%
TTAGCAGTGTTGTCAAATGA+TGG - chr8_1:6406565-6406584 Msa1175130:intron 35.0%
TGCCAAAGCATAGCATAATT+TGG - chr8_1:6406605-6406624 Msa1175130:CDS 35.0%
GACAAATATGCATGCATCAT+TGG - chr8_1:6406832-6406851 Msa1175130:intron 35.0%
! CAATGGAGTGTTAATATAGG+AGG - chr8_1:6407109-6407128 Msa1175130:intron 35.0%
TTCTTGCTGAGGAAAATCAA+CGG - chr8_1:6407204-6407223 Msa1175130:intron 35.0%
!!! GAAAGAAGGTTTGGTTCTTT+TGG - chr8_1:6407247-6407266 Msa1175130:intron 35.0%
ATTCTGATACACTATAGTGG+CGG + chr8_1:6407399-6407418 None:intergenic 35.0%
AAGAATGCTATTGTGCCATA+TGG + chr8_1:6407566-6407585 None:intergenic 35.0%
! CTGCACGAAATTCATTTTGT+AGG - chr8_1:6407591-6407610 Msa1175130:intron 35.0%
!! ACTCTTTCAAGAAGGTATCT+CGG - chr8_1:6407653-6407672 Msa1175130:intron 35.0%
!! TCATTATACCGACTTACCTT+TGG + chr8_1:6407731-6407750 None:intergenic 35.0%
CGATTGAAAATGTCTCTGTT+TGG - chr8_1:6407810-6407829 Msa1175130:intron 35.0%
! AAATTTGTTCCCTCACATCT+GGG + chr8_1:6407897-6407916 None:intergenic 35.0%
! TAAATTTGTTCCCTCACATC+TGG + chr8_1:6407898-6407917 None:intergenic 35.0%
GTTCCAAACCATCTTAATTG+AGG + chr8_1:6408070-6408089 None:intergenic 35.0%
TTGTCATTGAGTGAATACCA+TGG - chr8_1:6408151-6408170 Msa1175130:intron 35.0%
ATTTACTCATTGTTGGGATG+AGG + chr8_1:6408337-6408356 None:intergenic 35.0%
AAGTAAGCGTTTGCAATAGA+AGG + chr8_1:6408534-6408553 None:intergenic 35.0%
TTATTGTCTTTCAAGGTTCC+CGG - chr8_1:6409015-6409034 Msa1175130:intron 35.0%
CCTATCTTCTTGAGGTAATA+TGG + chr8_1:6409061-6409080 None:intergenic 35.0%
CCATATTACCTCAAGAAGAT+AGG - chr8_1:6409058-6409077 Msa1175130:intron 35.0%
AGAGTTCCATCAAAAGTTCA+TGG - chr8_1:6409107-6409126 Msa1175130:intron 35.0%
! ACTCATCCATGAACTTTTGA+TGG + chr8_1:6409116-6409135 None:intergenic 35.0%
ACACCCCTTAAATTTATAGG+GGG + chr8_1:6409171-6409190 None:intergenic 35.0%
CACACCCCTTAAATTTATAG+GGG + chr8_1:6409172-6409191 None:intergenic 35.0%
GCACACCCCTTAAATTTATA+GGG + chr8_1:6409173-6409192 None:intergenic 35.0%
!!! GTTTTGTGCTTTGAGAAACT+AGG - chr8_1:6409219-6409238 Msa1175130:CDS 35.0%
GCGAAGTTGAAAAGTAACGT+GGG + chr8_1:6402659-6402678 None:intergenic 40.0%
TGCGAAGTTGAAAAGTAACG+TGG + chr8_1:6402660-6402679 None:intergenic 40.0%
ATTGAAGACAAAGAACGGAG+GGG + chr8_1:6402828-6402847 None:intergenic 40.0%
CATTGAAGACAAAGAACGGA+GGG + chr8_1:6402829-6402848 None:intergenic 40.0%
CGCTCAAAATATTAACCCTC+AGG - chr8_1:6402875-6402894 Msa1175130:exon 40.0%
ATTGATGTGGCTGTTGATCA+AGG - chr8_1:6403271-6403290 Msa1175130:intron 40.0%
TTGATGTGGCTGTTGATCAA+GGG - chr8_1:6403272-6403291 Msa1175130:intron 40.0%
TGCAAAATTGATGTGTGGTG+TGG - chr8_1:6403513-6403532 Msa1175130:CDS 40.0%
TGGTGTGGTTGTTGATCAAA+GGG - chr8_1:6403528-6403547 Msa1175130:CDS 40.0%
!!! TTTGTTTTTGTGCGCTACCA+TGG - chr8_1:6403739-6403758 Msa1175130:intron 40.0%
!!! TTGTTTTTGTGCGCTACCAT+GGG - chr8_1:6403740-6403759 Msa1175130:intron 40.0%
! GTTTGAGTTCGGTGAAATCA+CGG - chr8_1:6403834-6403853 Msa1175130:intron 40.0%
! CAGTGACATGTCTGAAACAA+TGG - chr8_1:6404048-6404067 Msa1175130:CDS 40.0%
TGACATTTCAGAACCTAAGC+AGG + chr8_1:6404082-6404101 None:intergenic 40.0%
AAATGTCAGTATGCTGTTCG+AGG - chr8_1:6404094-6404113 Msa1175130:CDS 40.0%
AGAGATTGTTACACTTGCTC+AGG - chr8_1:6404117-6404136 Msa1175130:CDS 40.0%
AAACGAATGAGCATCTGGAT+TGG + chr8_1:6404517-6404536 None:intergenic 40.0%
TCATCAAACGAATGAGCATC+TGG + chr8_1:6404522-6404541 None:intergenic 40.0%
AGATGCTCATTCGTTTGATG+AGG - chr8_1:6404521-6404540 Msa1175130:intron 40.0%
TTCTGATAGGGTCATCAGAA+GGG - chr8_1:6404637-6404656 Msa1175130:intron 40.0%
ATGCAGCAGGTTCATTACAT+TGG + chr8_1:6405138-6405157 None:intergenic 40.0%
GGAAAAAAGTAATTGGCTGC+TGG + chr8_1:6405290-6405309 None:intergenic 40.0%
!!! GCCAATTACTTTTTTCCGAG+AGG - chr8_1:6405293-6405312 Msa1175130:intron 40.0%
! ATGTGACTATCCTGCTCTTT+TGG - chr8_1:6405410-6405429 Msa1175130:intron 40.0%
!! TCACTTTTGTCCAAAAGAGC+AGG + chr8_1:6405423-6405442 None:intergenic 40.0%
TTGTCACATAGAGGCTATAG+CGG - chr8_1:6405715-6405734 Msa1175130:intron 40.0%
! AATAGTGTATGGCGGAACAA+TGG + chr8_1:6405780-6405799 None:intergenic 40.0%
TCTATAACACTGCAGCGTTA+TGG - chr8_1:6405836-6405855 Msa1175130:CDS 40.0%
ATGTTGTCAACCATGGATCA+CGG + chr8_1:6405884-6405903 None:intergenic 40.0%
TGATCCATGGTTGACAACAT+TGG - chr8_1:6405884-6405903 Msa1175130:intron 40.0%
AATGAAAGGTCAACCACACT+AGG + chr8_1:6405950-6405969 None:intergenic 40.0%
CTGATTCAATAGAGAGAGCT+TGG - chr8_1:6405983-6406002 Msa1175130:CDS 40.0%
AAACCCTGAATACCCTGATA+TGG + chr8_1:6406147-6406166 None:intergenic 40.0%
GCAAATTGGAAACATACTGC+TGG + chr8_1:6406255-6406274 None:intergenic 40.0%
GTAATTGAGGCTGAATAGAG+AGG + chr8_1:6406448-6406467 None:intergenic 40.0%
! TACTTGTCAATTGCGGATTG+TGG + chr8_1:6406734-6406753 None:intergenic 40.0%
ATCCGCAATTGACAAGTAGT+AGG - chr8_1:6406736-6406755 Msa1175130:CDS 40.0%
AGCCTACTACTTGTCAATTG+CGG + chr8_1:6406741-6406760 None:intergenic 40.0%
ATCTTGATGAAGCAACTGGT+TGG - chr8_1:6406966-6406985 Msa1175130:intron 40.0%
TCTTGATGAAGCAACTGGTT+GGG - chr8_1:6406967-6406986 Msa1175130:intron 40.0%
ATCTGAACTCAAGAAGCAGT+TGG - chr8_1:6407000-6407019 Msa1175130:intron 40.0%
GCTTTAGCTGTTATAAACCC+CGG - chr8_1:6407055-6407074 Msa1175130:intron 40.0%
AGGTGAGCTGCAAATTACAA+TGG - chr8_1:6407092-6407111 Msa1175130:intron 40.0%
GGAATTTCTGTCATGTCTGT+AGG - chr8_1:6407181-6407200 Msa1175130:intron 40.0%
TCTTGCTGAGGAAAATCAAC+GGG - chr8_1:6407205-6407224 Msa1175130:intron 40.0%
!!! TTTGGTTCTTTTGGCTGATG+AGG - chr8_1:6407256-6407275 Msa1175130:intron 40.0%
! AACAATAGTGCCGCTATTTG+AGG + chr8_1:6407470-6407489 None:intergenic 40.0%
! AGAGACATTTTCAATCGGTG+TGG + chr8_1:6407807-6407826 None:intergenic 40.0%
AAATGTCTCTGTTTGGCATC+AGG - chr8_1:6407817-6407836 Msa1175130:intron 40.0%
! AATTTGTTCCCTCACATCTG+GGG + chr8_1:6407896-6407915 None:intergenic 40.0%
TTTGATCATGAGTCCTCCTA+AGG - chr8_1:6407972-6407991 Msa1175130:intron 40.0%
TGAATACCATGGATCTTTGC+AGG - chr8_1:6408162-6408181 Msa1175130:intron 40.0%
! CGAGTCTTATGAGTCATTCA+TGG - chr8_1:6408192-6408211 Msa1175130:intron 40.0%
GAGCAATGTATCTGTTTCCT+CGG - chr8_1:6408450-6408469 Msa1175130:intron 40.0%
AAACGCTTACTTAATGCCAC+TGG - chr8_1:6408542-6408561 Msa1175130:intron 40.0%
AGGAACAACAACAATTCCAG+TGG + chr8_1:6408561-6408580 None:intergenic 40.0%
! ACTGGAATTGTTGTTGTTCC+TGG - chr8_1:6408560-6408579 Msa1175130:intron 40.0%
! ATTGTTGTTGTTCCTGGTTC+TGG - chr8_1:6408566-6408585 Msa1175130:intron 40.0%
ACCTCAAGAAGATAGGATTC+CGG - chr8_1:6409065-6409084 Msa1175130:intron 40.0%
TTTGATGGAACTCTGTCAAG+CGG + chr8_1:6409101-6409120 None:intergenic 40.0%
GGCACACCCCTTAAATTTAT+AGG + chr8_1:6409174-6409193 None:intergenic 40.0%
CCATTGAAGACAAAGAACGG+AGG + chr8_1:6402830-6402849 None:intergenic 45.0%
CCTCCGTTCTTTGTCTTCAA+TGG - chr8_1:6402827-6402846 Msa1175130:three_prime_UTR 45.0%
! TTTTGAGCGGTAACAGGGAA+AGG + chr8_1:6402864-6402883 None:intergenic 45.0%
GTGGTGTGGTTGTTGATCAA+AGG - chr8_1:6403527-6403546 Msa1175130:CDS 45.0%
TCTGTTTGGTTGTGTGACTG+AGG - chr8_1:6403664-6403683 Msa1175130:intron 45.0%
!! GTTTTGTTAAATTGCGGCCC+TGG - chr8_1:6404189-6404208 Msa1175130:intron 45.0%
ATGTCATTGCGGTCTATAGC+AGG + chr8_1:6404270-6404289 None:intergenic 45.0%
CTTCTGATAGGGTCATCAGA+AGG - chr8_1:6404636-6404655 Msa1175130:intron 45.0%
ACTCTGTGTGTGCTCATAGT+AGG - chr8_1:6404664-6404683 Msa1175130:intron 45.0%
! GTGAAACACAGGGTTTGTTC+AGG - chr8_1:6405439-6405458 Msa1175130:intron 45.0%
AGAGAGAGCTTGGCAAATTG+TGG - chr8_1:6405993-6406012 Msa1175130:CDS 45.0%
CAAATTGTGGATCAGATCCC+TGG - chr8_1:6406006-6406025 Msa1175130:CDS 45.0%
TGGTGCCTATAGTCATAGTC+AGG - chr8_1:6406038-6406057 Msa1175130:intron 45.0%
ACCGCCCAGTGAATAGTAAA+GGG + chr8_1:6406104-6406123 None:intergenic 45.0%
!! CTGAATAGAGAGGGTACTGA+GGG + chr8_1:6406438-6406457 None:intergenic 45.0%
AGTGCTATAGTTCCGCAGTT+TGG - chr8_1:6406649-6406668 Msa1175130:intron 45.0%
CTACACTCAGTACCAAACTG+CGG + chr8_1:6406664-6406683 None:intergenic 45.0%
AAACTGCTGCTATAGCGTAG+CGG - chr8_1:6406686-6406705 Msa1175130:intron 45.0%
CTTGATGAAGCAACTGGTTG+GGG - chr8_1:6406968-6406987 Msa1175130:intron 45.0%
TTGATGAAGCAACTGGTTGG+GGG - chr8_1:6406969-6406988 Msa1175130:intron 45.0%
TTGGAAGATGCCAAGTCCAA+GGG - chr8_1:6407019-6407038 Msa1175130:intron 45.0%
ATGTCTGTAGGTTCTTGCTG+AGG - chr8_1:6407193-6407212 Msa1175130:intron 45.0%
AGCGGCACTATTGTTTACAG+CGG - chr8_1:6407475-6407494 Msa1175130:intron 45.0%
!! AAGAAGGTATCTCGGTCCAT+GGG - chr8_1:6407661-6407680 Msa1175130:intron 45.0%
! TCTTTTCAGTCCGTCTCCAA+AGG - chr8_1:6407712-6407731 Msa1175130:intron 45.0%
!! TACCGACTTACCTTTGGAGA+CGG + chr8_1:6407725-6407744 None:intergenic 45.0%
TGTTTGGCATCAGGCTATCA+TGG - chr8_1:6407826-6407845 Msa1175130:intron 45.0%
GTTTGGCATCAGGCTATCAT+GGG - chr8_1:6407827-6407846 Msa1175130:intron 45.0%
TTTGGCATCAGGCTATCATG+GGG - chr8_1:6407828-6407847 Msa1175130:intron 45.0%
TGGAAAGCGAGGAGGTTATA+TGG - chr8_1:6407855-6407874 Msa1175130:intron 45.0%
AAAGCGAGGAGGTTATATGG+AGG - chr8_1:6407858-6407877 Msa1175130:intron 45.0%
GAGGTTATATGGAGGTGACT+GGG - chr8_1:6407866-6407885 Msa1175130:intron 45.0%
AGAGGCAAAGGGTTAACCTT+AGG + chr8_1:6407991-6408010 None:intergenic 45.0%
! ACGCTGAAGTACTAAGAACG+AGG - chr8_1:6408088-6408107 Msa1175130:intron 45.0%
TACCATGGATCTTTGCAGGT+TGG - chr8_1:6408166-6408185 Msa1175130:intron 45.0%
TGAGTCATTCATGGCTGAGA+AGG - chr8_1:6408201-6408220 Msa1175130:intron 45.0%
GAGTCATTCATGGCTGAGAA+GGG - chr8_1:6408202-6408221 Msa1175130:intron 45.0%
TACTCATTGTTGGGATGAGG+TGG + chr8_1:6408334-6408353 None:intergenic 45.0%
GTAACCTGCAACAAAGCAGA+AGG - chr8_1:6408428-6408447 Msa1175130:intron 45.0%
!! CTTTGATAGCCTTTTCAGGC+AGG + chr8_1:6408481-6408500 None:intergenic 45.0%
!! GCAGCTTTGATAGCCTTTTC+AGG + chr8_1:6408485-6408504 None:intergenic 45.0%
AAAGGCTATCAAAGCTGCAG+AGG - chr8_1:6408487-6408506 Msa1175130:intron 45.0%
!! CGTTTGCAATAGAAGGCATC+AGG + chr8_1:6408527-6408546 None:intergenic 45.0%
!!! GTTGTTCCTGGTTCTGGTTT+TGG - chr8_1:6408572-6408591 Msa1175130:intron 45.0%
TTGATGGAACTCTGTCAAGC+GGG + chr8_1:6409100-6409119 None:intergenic 45.0%
TAGGGGGAAAAAACTCAGTG+AGG + chr8_1:6409155-6409174 None:intergenic 45.0%
!! ATATAATTTATCATAATTAT+CGG + chr8_1:6408832-6408851 None:intergenic 5.0%
ACCCATCACACCACACAATG+CGG - chr8_1:6402715-6402734 Msa1175130:three_prime_UTR 50.0%
TCCGCATTGTGTGGTGTGAT+GGG + chr8_1:6402719-6402738 None:intergenic 50.0%
TTCCGCATTGTGTGGTGTGA+TGG + chr8_1:6402720-6402739 None:intergenic 50.0%
AATCCGCTGCAGACAGATTC+AGG - chr8_1:6402739-6402758 Msa1175130:three_prime_UTR 50.0%
TTGGTTGTGTGACTGAGGAC+TGG - chr8_1:6403669-6403688 Msa1175130:intron 50.0%
TCCATGACACCATTCTGCCA+GGG + chr8_1:6404209-6404228 None:intergenic 50.0%
ATCCATGACACCATTCTGCC+AGG + chr8_1:6404210-6404229 None:intergenic 50.0%
GATAGGGTCATCAGAAGGGT+TGG - chr8_1:6404641-6404660 Msa1175130:intron 50.0%
! GGACACGATCCAAAAGTGTG+AGG - chr8_1:6404701-6404720 Msa1175130:intron 50.0%
AGTGCGTCACCACAAAAACG+AGG - chr8_1:6404816-6404835 Msa1175130:intron 50.0%
GTGCGTCACCACAAAAACGA+GGG - chr8_1:6404817-6404836 Msa1175130:intron 50.0%
!! CAGTCACACCCTCGTTTTTG+TGG + chr8_1:6404828-6404847 None:intergenic 50.0%
! TAGAGGCTATAGCGGTGCTA+CGG - chr8_1:6405723-6405742 Msa1175130:intron 50.0%
CCGCCCAGTGAATAGTAAAG+GGG + chr8_1:6406103-6406122 None:intergenic 50.0%
CCCCTTTACTATTCACTGGG+CGG - chr8_1:6406100-6406119 Msa1175130:intron 50.0%
GACCGCCCAGTGAATAGTAA+AGG + chr8_1:6406105-6406124 None:intergenic 50.0%
TTACGTGATGCAATAGCCGC+TGG - chr8_1:6406165-6406184 Msa1175130:intron 50.0%
TGCAATAGCCGCTGGAATTG+AGG - chr8_1:6406173-6406192 Msa1175130:intron 50.0%
!! TAGAGAGGGTACTGAGGGAT+GGG + chr8_1:6406433-6406452 None:intergenic 50.0%
!! ATAGAGAGGGTACTGAGGGA+TGG + chr8_1:6406434-6406453 None:intergenic 50.0%
!! GCTGAATAGAGAGGGTACTG+AGG + chr8_1:6406439-6406458 None:intergenic 50.0%
TCAGCCTCAATTACCCTCCA+TGG - chr8_1:6406454-6406473 Msa1175130:intron 50.0%
GTTGGAAGATGCCAAGTCCA+AGG - chr8_1:6407018-6407037 Msa1175130:intron 50.0%
AACACTGATGCCCTTGGACT+TGG + chr8_1:6407032-6407051 None:intergenic 50.0%
!! AGTCCAAGGGCATCAGTGTT+AGG - chr8_1:6407032-6407051 Msa1175130:intron 50.0%
!! GTCCAAGGGCATCAGTGTTA+GGG - chr8_1:6407033-6407052 Msa1175130:intron 50.0%
ATAAACCCCGGCAATCCAAC+AGG - chr8_1:6407067-6407086 Msa1175130:intron 50.0%
TAAACCCCGGCAATCCAACA+GGG - chr8_1:6407068-6407087 Msa1175130:intron 50.0%
!! CAAGAAGGTATCTCGGTCCA+TGG - chr8_1:6407660-6407679 Msa1175130:intron 50.0%
GTATCTCGGTCCATGGGATA+CGG - chr8_1:6407667-6407686 Msa1175130:intron 50.0%
ATCATTGTCGCCGTATCCCA+TGG + chr8_1:6407680-6407699 None:intergenic 50.0%
GTCCGTCTCCAAAGGTAAGT+CGG - chr8_1:6407720-6407739 Msa1175130:intron 50.0%
GGAGGTTATATGGAGGTGAC+TGG - chr8_1:6407865-6407884 Msa1175130:intron 50.0%
! TGGGTTTTCCCCAGATGTGA+GGG - chr8_1:6407885-6407904 Msa1175130:intron 50.0%
GGCAAAGGGTTAACCTTAGG+AGG + chr8_1:6407988-6408007 None:intergenic 50.0%
CTCCAACCTGCAAAGATCCA+TGG + chr8_1:6408171-6408190 None:intergenic 50.0%
AACCTTTGCACGCGTAGCAA+GGG + chr8_1:6408242-6408261 None:intergenic 50.0%
TAACCTTTGCACGCGTAGCA+AGG + chr8_1:6408243-6408262 None:intergenic 50.0%
! TGCTCCTTCTGCTTTGTTGC+AGG + chr8_1:6408435-6408454 None:intergenic 50.0%
!! GCAATAGAAGGCATCAGGTG+CGG + chr8_1:6408522-6408541 None:intergenic 50.0%
!!! TCCTGGTTCTGGTTTTGGAC+AGG - chr8_1:6408577-6408596 Msa1175130:intron 50.0%
ACCTGTCCAAAACCAGAACC+AGG + chr8_1:6408581-6408600 None:intergenic 50.0%
! TTCCCGGCACATGGCATTTT+AGG - chr8_1:6409031-6409050 Msa1175130:intron 50.0%
CACCTAAAATGCCATGTGCC+GGG + chr8_1:6409036-6409055 None:intergenic 50.0%
GCACCTAAAATGCCATGTGC+CGG + chr8_1:6409037-6409056 None:intergenic 50.0%
GCCGGAATCCTATCTTCTTG+AGG + chr8_1:6409069-6409088 None:intergenic 50.0%
! CAGCGGATTTCCGCATTGTG+TGG + chr8_1:6402728-6402747 None:intergenic 55.0%
GTGCCTGAATCTGTCTGCAG+CGG + chr8_1:6402745-6402764 None:intergenic 55.0%
AAGAACGGAGGGGAGAAGGA+TGG + chr8_1:6402818-6402837 None:intergenic 55.0%
GACAAAGAACGGAGGGGAGA+AGG + chr8_1:6402822-6402841 None:intergenic 55.0%
AAATTGCGGCCCTGGCAGAA+TGG - chr8_1:6404197-6404216 Msa1175130:intron 55.0%
! AGGTCGCAGCCTCACACTTT+TGG + chr8_1:6404713-6404732 None:intergenic 55.0%
CAGATCCCTGGAAGAGCAAC+TGG - chr8_1:6406018-6406037 Msa1175130:CDS 55.0%
AGGCACCAGTTGCTCTTCCA+GGG + chr8_1:6406026-6406045 None:intergenic 55.0%
TAGGCACCAGTTGCTCTTCC+AGG + chr8_1:6406027-6406046 None:intergenic 55.0%
ATCGCGCTCCTCAATTCCAG+CGG + chr8_1:6406184-6406203 None:intergenic 55.0%
GCCTCAATTACCCTCCATGG+TGG - chr8_1:6406457-6406476 Msa1175130:intron 55.0%
GCCACCATGGAGGGTAATTG+AGG + chr8_1:6406461-6406480 None:intergenic 55.0%
ACTTTACCAGCTGGCCACCA+TGG + chr8_1:6406474-6406493 None:intergenic 55.0%
AGCCCTAACACTGATGCCCT+TGG + chr8_1:6407038-6407057 None:intergenic 55.0%
TCAGGCTATCATGGGGAGTG+TGG - chr8_1:6407835-6407854 Msa1175130:intron 55.0%
! CTGGGTTTTCCCCAGATGTG+AGG - chr8_1:6407884-6407903 Msa1175130:intron 55.0%
TTCCCTTGCTACGCGTGCAA+AGG - chr8_1:6408237-6408256 Msa1175130:intron 55.0%
!! TTTTCAGGCAGGCGAATCCG+AGG + chr8_1:6408470-6408489 None:intergenic 55.0%
TCGGATTCGCCTGCCTGAAA+AGG - chr8_1:6408469-6408488 Msa1175130:intron 55.0%
CTTTCAAGGTTCCCGGCACA+TGG - chr8_1:6409022-6409041 Msa1175130:intron 55.0%
CTCTGTCAAGCGGGTGACAA+TGG + chr8_1:6409091-6409110 None:intergenic 55.0%
! GCCCTGGCAGAATGGTGTCA+TGG - chr8_1:6404205-6404224 Msa1175130:intron 60.0%
AGTGTGAGGCTGCGACCTCT+AGG - chr8_1:6404715-6404734 Msa1175130:intron 60.0%
! GGCTGCTGGCCTAGAGATTG+AGG + chr8_1:6405276-6405295 None:intergenic 60.0%
GCTACGGCTCTCTAGCACAG+TGG - chr8_1:6405739-6405758 Msa1175130:intron 60.0%
! GCTGGAATTGAGGAGCGCGA+TGG - chr8_1:6406183-6406202 Msa1175130:intron 60.0%
TACCAGCTGGCCACCATGGA+GGG + chr8_1:6406470-6406489 None:intergenic 60.0%
TTACCAGCTGGCCACCATGG+AGG + chr8_1:6406471-6406490 None:intergenic 60.0%
TGAAGCAACTGGTTGGGGGC+TGG - chr8_1:6406973-6406992 Msa1175130:intron 60.0%
ACCTGCCCTGTTGGATTGCC+GGG + chr8_1:6407076-6407095 None:intergenic 60.0%
CACCTGCCCTGTTGGATTGC+CGG + chr8_1:6407077-6407096 None:intergenic 60.0%
TTGCAGCTCACCTGCCCTGT+TGG + chr8_1:6407085-6407104 None:intergenic 60.0%
! CATGGGGAGTGTGGAAAGCG+AGG - chr8_1:6407844-6407863 Msa1175130:intron 60.0%
GTCAAGCGGGTGACAATGGC+CGG + chr8_1:6409087-6409106 None:intergenic 60.0%
TACCCTCCATGGTGGCCAGC+TGG - chr8_1:6406465-6406484 Msa1175130:intron 65.0%
CCTGCCCTGTTGGATTGCCG+GGG + chr8_1:6407075-6407094 None:intergenic 65.0%
! GGGGAGTGTGGAAAGCGAGG+AGG - chr8_1:6407847-6407866 Msa1175130:intron 65.0%
CCCCGGCAATCCAACAGGGC+AGG - chr8_1:6407072-6407091 Msa1175130:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 6402597 6409438 6402597 ID=Msa1175130;Name=Msa1175130
chr8_1 mRNA 6402597 6409438 6402597 ID=Msa1175130-mRNA-1;Parent=Msa1175130;Name=Msa1175130-mRNA-1;_AED=0.09;_eAED=0.09;_QI=135|0.92|1|1|1|1|14|292|507
chr8_1 exon 6402597 6403005 6402597 ID=Msa1175130-mRNA-1:exon:2302;Parent=Msa1175130-mRNA-1
chr8_1 exon 6403437 6403640 6403437 ID=Msa1175130-mRNA-1:exon:2301;Parent=Msa1175130-mRNA-1
chr8_1 exon 6403777 6403851 6403777 ID=Msa1175130-mRNA-1:exon:2300;Parent=Msa1175130-mRNA-1
chr8_1 exon 6404042 6404196 6404042 ID=Msa1175130-mRNA-1:exon:2299;Parent=Msa1175130-mRNA-1
chr8_1 exon 6404302 6404422 6404302 ID=Msa1175130-mRNA-1:exon:2298;Parent=Msa1175130-mRNA-1
chr8_1 exon 6404758 6404832 6404758 ID=Msa1175130-mRNA-1:exon:2297;Parent=Msa1175130-mRNA-1
chr8_1 exon 6404942 6405079 6404942 ID=Msa1175130-mRNA-1:exon:2296;Parent=Msa1175130-mRNA-1
chr8_1 exon 6405549 6405659 6405549 ID=Msa1175130-mRNA-1:exon:2295;Parent=Msa1175130-mRNA-1
chr8_1 exon 6405778 6405882 6405778 ID=Msa1175130-mRNA-1:exon:2294;Parent=Msa1175130-mRNA-1
chr8_1 exon 6405976 6406054 6405976 ID=Msa1175130-mRNA-1:exon:2293;Parent=Msa1175130-mRNA-1
chr8_1 exon 6406575 6406636 6406575 ID=Msa1175130-mRNA-1:exon:2292;Parent=Msa1175130-mRNA-1
chr8_1 exon 6406721 6406786 6406721 ID=Msa1175130-mRNA-1:exon:2291;Parent=Msa1175130-mRNA-1
chr8_1 exon 6407493 6407543 6407493 ID=Msa1175130-mRNA-1:exon:2290;Parent=Msa1175130-mRNA-1
chr8_1 exon 6409139 6409438 6409139 ID=Msa1175130-mRNA-1:exon:2289;Parent=Msa1175130-mRNA-1
chr8_1 five_prime_UTR 6409304 6409438 6409304 ID=Msa1175130-mRNA-1:five_prime_utr;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6409139 6409303 6409139 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6407493 6407543 6407493 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6406721 6406786 6406721 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6406575 6406636 6406575 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6405976 6406054 6405976 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6405778 6405882 6405778 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6405549 6405659 6405549 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6404942 6405079 6404942 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6404758 6404832 6404758 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6404302 6404422 6404302 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6404042 6404196 6404042 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6403777 6403851 6403777 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6403437 6403640 6403437 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 CDS 6402889 6403005 6402889 ID=Msa1175130-mRNA-1:cds;Parent=Msa1175130-mRNA-1
chr8_1 three_prime_UTR 6402597 6402888 6402597 ID=Msa1175130-mRNA-1:three_prime_utr;Parent=Msa1175130-mRNA-1
Gene Sequence

>Msa1175130

ATGCGGAAATCCGCTGCAGACAGATTCAGGCACCTTTTCAACCGTTCACTTGTTTTTGTTCGGAATCAAAATCAACAATATCGCCATCCTTCTCCCCTCCGTTCTTTGTCTTCAATGGCTTCTGATTCACCTTTCCCTGTTACCGCTCAAAATATTAACCCTCAGAACTTGCAAAAAGCTTTGCAAGCCAATCCAGATGCTCATTCGTTTGATGAGATAATTTACTGCAACATTGGAAATCCTCAATCTCTAGGCCAGCAGCCAATTACTTTTTTCCGAGAGGTTCTTGCTTTATGTGACTATCCTGCTCTTTTGGACAAAAGTGAAACACAGGGTTTGTTCAGTGCTGATTCAATAGAGAGAGCTTGGCAAATTGTGGATCAGATCCCTGGAAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTATTCAGGGTTTACGTGATGCAATAGCCGCTGGAATTGAGGAGCGCGATGGTTTTCCTTGTAATGCCAATGACATTTTCTTGACAGATGGTGCAAGCCCAGCAGTCCATATGATGATGCAATTACTCATTAGATCAGAAAAGGATGGTATTTTGTGTCCCATCCCTCAGTACCCTCTCTATTCAGCCTCAATTACCCTCCATGGTGGCCAGCTGGTACCATATTATCTTGATGAAGCAACTGGTTGGGGGCTGGAAATATCTGAACTCAAGAAGCAGTTGGAAGATGCCAAGTCCAAGGGCATCAGTGTTAGGGCTTTAGCTGTTATAAACCCCGGCAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAACGGGCTATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTTTATCAAGAAAACGTTTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATACGGCGACAATGATATTTGCTTAGTATCTTTTCAGTCCGTCTCCAAAGGCTATCATGGGGAGTGTGGAAAGCGAGGAGGTTATATGGAGGTGACTGGGTTTTCCCCAGATGTGAGGGAACAAATTTATAAAGTGGCATCTGTGAATCTTTGTTCTAACATCACTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCTCCTAAGGTTGGAGACGAGTCTTATGAGTCATTCATGGCTGAGAAGGGTGCTATTTTATCTTCCCTTGCTACGCGTGCAAAGACACTTGAAGAAGCTTTAAACAAATTAGAGGGCGTAACCTGCAACAAAGCAGAAGGAGCAATGTATCTGTTTCCTCGGATTCGCCTGCCTGAAAAGGCTATCAAAGCTGCAGAGGCTGAAAAGTCCGCACCTGATGCCTTCTATTGCAAACGCTTACTTAATGCCACTGGAATTGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCCGGCACATGGCATTTTAGGTGCACCATATTACCTCAAGAAGATAGGATTCCGGCCATTGTCACCCGCTTGACAGAGTTCCATCAAAAGTTCATGGATGAGTTTCGTGATTGA
Protein sequence

>Msa1175130

MRKSAADRFRHLFNRSLVFVRNQNQQYRHPSPLRSLSSMASDSPFPVTAQNINPQNLQKALQANPDAHSFDEIIYCNIGNPQSLGQQPITFFREVLALCDYPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRDAIAAGIEERDGFPCNANDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASITLHGGQLVPYYLDEATGWGLEISELKKQLEDAKSKGISVRALAVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGDNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQILASLIMSPPKVGDESYESFMAEKGAILSSLATRAKTLEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHQKFMDEFRD*