AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1277120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277120 MtrunA17_Chr8g0345201 95.229 524 8 1 1 507 1 524 0.0 1032
Msa1277120 MtrunA17_Chr5g0412871 48.101 474 234 4 44 507 3 474 2.98e-158 458
Msa1277120 MtrunA17_Chr6g0488041 22.911 371 258 14 132 497 86 433 8.81e-18 85.9
Msa1277120 MtrunA17_Chr8g0387481 23.077 351 243 12 141 486 94 422 1.30e-17 85.5
Msa1277120 MtrunA17_Chr8g0360241 21.965 346 218 9 136 468 77 383 2.73e-16 80.9
Msa1277120 MtrunA17_Chr8g0389311 22.642 371 259 14 132 497 78 425 1.91e-15 78.6
Msa1277120 MtrunA17_Chr8g0389321 22.642 371 259 14 132 497 78 425 1.91e-15 78.6
Msa1277120 MtrunA17_Chr6g0475681 21.271 362 258 12 137 494 183 521 6.13e-15 77.4
Msa1277120 MtrunA17_Chr2g0324801 22.515 342 219 11 137 468 46 351 9.99e-15 75.9
Msa1277120 MtrunA17_Chr7g0248681 21.833 371 262 12 132 497 84 431 3.93e-14 74.7
Msa1277120 MtrunA17_Chr5g0400831 22.193 374 265 12 132 497 77 432 2.04e-13 72.4
Msa1277120 MtrunA17_Chr8g0348351 23.881 335 230 11 165 497 119 430 3.03e-13 72.0
Msa1277120 MtrunA17_Chr3g0135251 24.026 308 207 12 163 465 109 394 5.70e-13 70.9
Msa1277120 MtrunA17_Chr5g0398431 21.922 333 237 11 163 494 178 488 8.06e-13 70.5
Msa1277120 MtrunA17_Chr4g0004131 25.948 343 194 15 137 468 64 357 1.17e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277120 AT1G72330.1 74.349 538 98 3 10 507 3 540 0.0 823
Msa1277120 AT1G72330.3 72.595 551 98 4 10 507 3 553 0.0 815
Msa1277120 AT1G17290.1 81.667 480 71 1 45 507 64 543 0.0 796
Msa1277120 AT1G72330.2 71.499 407 76 3 10 376 3 409 0.0 586
Msa1277120 AT1G70580.4 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1277120 AT1G70580.2 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1277120 AT1G70580.3 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1277120 AT1G70580.1 49.784 464 225 3 51 507 12 474 2.53e-160 464
Msa1277120 AT1G23310.1 51.724 435 208 2 72 505 39 472 1.29e-159 462
Msa1277120 AT1G23310.2 52.736 402 188 2 72 472 39 439 3.76e-147 429
Msa1277120 AT1G62960.1 23.324 373 263 11 125 494 194 546 1.08e-19 92.8
Msa1277120 AT5G51690.2 23.784 370 253 15 137 501 25 370 1.18e-18 88.2
Msa1277120 AT5G51690.1 23.529 374 257 15 133 501 144 493 1.48e-18 89.0
Msa1277120 AT4G28410.1 23.864 352 240 9 118 468 87 411 2.22e-18 88.2
Msa1277120 AT2G24850.1 22.133 375 244 11 136 500 86 422 2.40e-18 87.8
Msa1277120 AT4G11280.1 24.185 368 253 12 141 504 97 442 2.57e-18 88.2
Msa1277120 AT4G28410.2 23.647 351 240 9 118 467 87 410 3.26e-18 87.4
Msa1277120 AT5G36160.1 22.016 377 263 11 125 500 68 414 3.62e-17 84.0
Msa1277120 AT4G28420.2 21.684 392 250 12 125 502 86 434 3.82e-17 84.3
Msa1277120 AT2G28815.1 46.154 104 24 3 401 504 63 134 3.50e-16 79.7
Msa1277120 AT2G20610.1 22.135 384 260 12 119 497 86 435 3.53e-16 81.3
Msa1277120 AT4G26200.1 21.693 378 266 13 130 500 89 443 3.74e-16 81.3
Msa1277120 AT5G53970.1 22.857 350 232 10 125 468 59 376 5.26e-16 80.5
Msa1277120 AT4G37770.1 23.342 377 252 13 132 497 77 427 6.37e-16 80.5
Msa1277120 AT4G23590.1 21.226 424 278 16 90 500 27 407 7.09e-16 80.1
Msa1277120 AT4G28420.1 21.905 315 199 9 125 425 86 367 8.45e-16 79.7
Msa1277120 AT3G61510.1 22.493 369 253 14 135 497 87 428 2.89e-15 78.6
Msa1277120 AT2G20610.2 21.937 351 238 10 119 464 86 405 2.95e-15 78.6
Msa1277120 AT4G08040.1 24.709 344 231 14 127 465 70 390 2.00e-14 75.9
Msa1277120 AT4G23600.1 21.066 394 256 16 90 469 27 379 3.23e-13 72.0
Msa1277120 AT3G49700.1 23.836 365 247 13 141 497 86 427 1.80e-12 69.7
Msa1277120 AT1G01480.1 21.978 364 261 11 141 500 94 438 5.39e-12 68.6
Msa1277120 AT4G23600.3 21.204 382 246 16 97 464 34 374 9.79e-12 67.0
Msa1277120 AT5G65800.1 22.727 374 258 13 132 497 77 427 1.40e-11 67.0
Msa1277120 AT1G01480.2 22.024 336 241 10 167 500 16 332 2.08e-11 66.2

Find 156 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGAAGGTTTGGTTCTTT+TGG 0.206185 8_3:-12256202 Msa1277120:CDS
CACCTGCCCTGTTGGATTGC+CGG 0.219208 8_3:+12256375 None:intergenic
TGCTCCTTCTGCTTTGTTGC+AGG 0.238077 8_3:+12255017 None:intergenic
ATTTCCATATCAGGGTATTC+AGG 0.251842 8_3:-12257309 Msa1277120:intron
ATGTGACTATCCTGCTCTTT+TGG 0.267249 8_3:-12258039 Msa1277120:CDS
CCTATCTTCTTGAGGTAATA+TGG 0.270115 8_3:+12254391 None:intergenic
ATTGTTGTTGTTCCTGGTTC+TGG 0.272343 8_3:-12254883 Msa1277120:CDS
GGCACACCCCTTAAATTTAT+AGG 0.275408 8_3:+12254278 None:intergenic
CCTCCGTTCTTTGTCTTCAA+TGG 0.279276 8_3:-12260622 Msa1277120:CDS
ACCTGCCCTGTTGGATTGCC+GGG 0.285128 8_3:+12256376 None:intergenic
GCACACCCCTTAAATTTATA+GGG 0.286667 8_3:+12254279 None:intergenic
GTTGTTCCTGGTTCTGGTTT+TGG 0.293635 8_3:-12254877 Msa1277120:CDS
TGGAAAGCGAGGAGGTTATA+TGG 0.296188 8_3:-12255594 Msa1277120:CDS
ACTGGAATTGTTGTTGTTCC+TGG 0.300917 8_3:-12254889 Msa1277120:CDS
AGTCCAAGGGCATCAGTGTT+AGG 0.320042 8_3:-12256417 Msa1277120:CDS
AAGTAAGCGTTTGCAATAGA+AGG 0.322961 8_3:+12254918 None:intergenic
TAGGCACCAGTTGCTCTTCC+AGG 0.325169 8_3:+12257425 None:intergenic
AATCCGCTGCAGACAGATTC+AGG 0.326102 8_3:-12260710 Msa1277120:CDS
TAAATTTGTTCCCTCACATC+TGG 0.331054 8_3:+12255554 None:intergenic
TCATTGTTAAATATATCAAT+TGG 0.341988 8_3:+12254256 None:intergenic
AAAGAGTGAAATTTCTTCTC+AGG 0.347700 8_3:+12255812 None:intergenic
GTTGCTTCATCAAGATAATA+TGG 0.353298 8_3:+12256490 None:intergenic
GATACGTCTCAACAATTCAT+AGG 0.375165 8_3:-12260861 None:intergenic
ATTGATATATTTAACAATGA+TGG 0.381889 8_3:-12254253 Msa1277120:three_prime_UTR
AGAAGCTTTAAACAAATTAG+AGG 0.385150 8_3:-12255046 Msa1277120:CDS
TTATTGTCTTTCAAGGTTCC+CGG 0.386428 8_3:-12254434 Msa1277120:intron
GTGAAACACAGGGTTTGTTC+AGG 0.393334 8_3:-12258010 Msa1277120:intron
TCTTGATGAAGCAACTGGTT+GGG 0.394854 8_3:-12256482 Msa1277120:CDS
TGTTTGGCATCAGGCTATCA+TGG 0.398247 8_3:-12255623 Msa1277120:intron
CTTGATGAAGCAACTGGTTG+GGG 0.405077 8_3:-12256481 Msa1277120:CDS
CGCTCAAAATATTAACCCTC+AGG 0.406784 8_3:-12260574 Msa1277120:intron
TAGATAATTTACTGCAACAT+TGG 0.412151 8_3:-12258203 Msa1277120:CDS
TTGCAGCTCACCTGCCCTGT+TGG 0.421430 8_3:+12256367 None:intergenic
TGAGTAATTGCATCATCATA+TGG 0.423018 8_3:+12257071 None:intergenic
ATAAACCCCGGCAATCCAAC+AGG 0.423770 8_3:-12256382 Msa1277120:CDS
CAATACCTGACTATGACTAT+AGG 0.434197 8_3:+12257406 None:intergenic
CCATATTACCTCAAGAAGAT+AGG 0.434491 8_3:-12254391 Msa1277120:CDS
ATCTGTCAAGAAAATGTCAT+TGG 0.442497 8_3:+12257229 None:intergenic
CAGATCCCTGGAAGAGCAAC+TGG 0.442624 8_3:-12257431 Msa1277120:CDS
CGAGTCTTATGAGTCATTCA+TGG 0.442957 8_3:-12255257 Msa1277120:CDS
TATTATCTTGATGAAGCAAC+TGG 0.443419 8_3:-12256487 Msa1277120:CDS
TCATCAAACGAATGAGCATC+TGG 0.451967 8_3:+12258930 None:intergenic
TCGGATTCGCCTGCCTGAAA+AGG 0.452019 8_3:-12254980 Msa1277120:CDS
TTGATATATTTAACAATGAT+GGG 0.453381 8_3:-12254252 Msa1277120:three_prime_UTR
TTTCCATATCAGGGTATTCA+GGG 0.458818 8_3:-12257308 Msa1277120:intron
GGCTGCTGGCCTAGAGATTG+AGG 0.460510 8_3:+12258176 None:intergenic
GTTTGGCATCAGGCTATCAT+GGG 0.462803 8_3:-12255622 Msa1277120:intron
TTTATATATTGTGAGAAAGA+TGG 0.462970 8_3:+12260756 None:intergenic
ACCTCAAGAAGATAGGATTC+CGG 0.467686 8_3:-12254384 Msa1277120:CDS
AACACTGATGCCCTTGGACT+TGG 0.471424 8_3:+12256420 None:intergenic
AGAGTTCCATCAAAAGTTCA+TGG 0.472947 8_3:-12254342 Msa1277120:CDS
CTTTCAAGGTTCCCGGCACA+TGG 0.473583 8_3:-12254427 Msa1277120:intron
GTCAAGCGGGTGACAATGGC+CGG 0.476132 8_3:+12254365 None:intergenic
AAACAAGTGAACGGTTGAAA+AGG 0.477236 8_3:+12260685 None:intergenic
TTCCGCATTGTGTGGTGTGG+TGG 0.477445 8_3:+12260732 None:intergenic
TACCCTCCATGGTGGCCAGC+TGG 0.480341 8_3:-12256984 Msa1277120:intron
GTATCTCGGTCCATGGGATA+CGG 0.483453 8_3:-12255782 Msa1277120:CDS
CAAATTGTGGATCAGATCCC+TGG 0.483599 8_3:-12257443 Msa1277120:CDS
CGTTTGCAATAGAAGGCATC+AGG 0.485052 8_3:+12254925 None:intergenic
GTCCAAGGGCATCAGTGTTA+GGG 0.485526 8_3:-12256416 Msa1277120:CDS
GAAATTTCACTCTTTCAAGA+AGG 0.487439 8_3:-12255804 Msa1277120:CDS
AGCCCTAACACTGATGCCCT+TGG 0.492947 8_3:+12256414 None:intergenic
AAATTTGTTCCCTCACATCT+GGG 0.493584 8_3:+12255555 None:intergenic
CATTGTTAAATATATCAATT+GGG 0.493845 8_3:+12254257 None:intergenic
ATTACTCATTAGATCAGAAA+AGG 0.495437 8_3:-12257056 Msa1277120:CDS
CAAGAAGGTATCTCGGTCCA+TGG 0.500046 8_3:-12255789 Msa1277120:CDS
TCTTGCTGAGGAAAATCAAC+GGG 0.500346 8_3:-12256244 Msa1277120:CDS
CACCTAAAATGCCATGTGCC+GGG 0.501375 8_3:+12254416 None:intergenic
GGAGGTTATATGGAGGTGAC+TGG 0.502434 8_3:-12255584 Msa1277120:CDS
CTGATTCAATAGAGAGAGCT+TGG 0.502786 8_3:-12257466 Msa1277120:CDS
ATCTTGATGAAGCAACTGGT+TGG 0.502802 8_3:-12256483 Msa1277120:CDS
TGCAATAGCCGCTGGAATTG+AGG 0.504928 8_3:-12257276 Msa1277120:CDS
CTCTGTCAAGCGGGTGACAA+TGG 0.505154 8_3:+12254361 None:intergenic
AATCTTTGTTCTAACATCAC+TGG 0.506748 8_3:-12255515 Msa1277120:CDS
GACAAAGAACGGAGGGGAGA+AGG 0.507553 8_3:+12260630 None:intergenic
CCTGCCCTGTTGGATTGCCG+GGG 0.514783 8_3:+12256377 None:intergenic
ATCATTGTCGCCGTATCCCA+TGG 0.516207 8_3:+12255772 None:intergenic
TGGTGCCTATAGTCATAGTC+AGG 0.517915 8_3:-12257411 Msa1277120:intron
ACTCTTTCAAGAAGGTATCT+CGG 0.524240 8_3:-12255796 Msa1277120:CDS
ATTGGAAATCCTCAATCTCT+AGG 0.525521 8_3:-12258185 Msa1277120:CDS
TTTGATCATGAGTCCTCCTA+AGG 0.526622 8_3:-12255477 Msa1277120:intron
AAACGAATGAGCATCTGGAT+TGG 0.528171 8_3:+12258935 None:intergenic
ATCTGAACTCAAGAAGCAGT+TGG 0.529742 8_3:-12256449 Msa1277120:CDS
GAGCAATGTATCTGTTTCCT+CGG 0.534079 8_3:-12254999 Msa1277120:CDS
TAGAGAGGGTACTGAGGGAT+GGG 0.535149 8_3:+12257019 None:intergenic
AGAGAGAGCTTGGCAAATTG+TGG 0.538808 8_3:-12257456 Msa1277120:CDS
GCCACCATGGAGGGTAATTG+AGG 0.538881 8_3:+12256991 None:intergenic
TTACGTGATGCAATAGCCGC+TGG 0.539193 8_3:-12257284 Msa1277120:CDS
TCCGCATTGTGTGGTGTGGT+GGG 0.539517 8_3:+12260733 None:intergenic
TTCCCTTGCTACGCGTGCAA+AGG 0.542143 8_3:-12255212 Msa1277120:intron
TAACCTTTGCACGCGTAGCA+AGG 0.548318 8_3:+12255209 None:intergenic
GAGGGAACAAATTTATAAAG+TGG 0.548832 8_3:-12255546 Msa1277120:CDS
GTAATTGAGGCTGAATAGAG+AGG 0.554085 8_3:+12257004 None:intergenic
AACCTTTGCACGCGTAGCAA+GGG 0.554367 8_3:+12255210 None:intergenic
TGAGTCATTCATGGCTGAGA+AGG 0.555179 8_3:-12255248 Msa1277120:CDS
TACCAGCTGGCCACCATGGA+GGG 0.557336 8_3:+12256982 None:intergenic
GTTGGAAGATGCCAAGTCCA+AGG 0.558140 8_3:-12256431 Msa1277120:CDS
AAAATGTCATTGGCATTACA+AGG 0.558712 8_3:+12257239 None:intergenic
TCAGCCTCAATTACCCTCCA+TGG 0.559522 8_3:-12256995 Msa1277120:CDS
GAAGCTTTAAACAAATTAGA+GGG 0.560738 8_3:-12255045 Msa1277120:CDS
TTGATGGAACTCTGTCAAGC+GGG 0.564338 8_3:+12254352 None:intergenic
TACCGACTTACCTTTGGAGA+CGG 0.565061 8_3:+12255727 None:intergenic
GGCAAAGGGTTAACCTTAGG+AGG 0.566598 8_3:+12255464 None:intergenic
GCACCTAAAATGCCATGTGC+CGG 0.567511 8_3:+12254415 None:intergenic
TTTGGACAAAAGTGAAACAC+AGG 0.570857 8_3:-12258021 Msa1277120:CDS
CACACCCCTTAAATTTATAG+GGG 0.578462 8_3:+12254280 None:intergenic
AGGCACCAGTTGCTCTTCCA+GGG 0.581572 8_3:+12257426 None:intergenic
AAACGCTTACTTAATGCCAC+TGG 0.581835 8_3:-12254907 Msa1277120:CDS
TCAGGCTATCATGGGGAGTG+TGG 0.583981 8_3:-12255614 Msa1277120:intron
GTTACATGATGAAAGAAACT+AGG 0.589250 8_3:-12254150 Msa1277120:three_prime_UTR
AAGAACGGAGGGGAGAAGGA+TGG 0.591969 8_3:+12260634 None:intergenic
ATAGAGAGGGTACTGAGGGA+TGG 0.592245 8_3:+12257018 None:intergenic
AAGAAGGTATCTCGGTCCAT+GGG 0.592457 8_3:-12255788 Msa1277120:CDS
ACTTTACCAGCTGGCCACCA+TGG 0.594947 8_3:+12256978 None:intergenic
GAGGTTATATGGAGGTGACT+GGG 0.595186 8_3:-12255583 Msa1277120:CDS
AGATGCTCATTCGTTTGATG+AGG 0.599601 8_3:-12258928 Msa1277120:intron
CATTGAAGACAAAGAACGGA+GGG 0.602118 8_3:+12260623 None:intergenic
GTAACCTGCAACAAAGCAGA+AGG 0.602222 8_3:-12255021 Msa1277120:CDS
GAGTCATTCATGGCTGAGAA+GGG 0.602471 8_3:-12255247 Msa1277120:CDS
GCTTTAGCTGTTATAAACCC+CGG 0.604551 8_3:-12256394 Msa1277120:CDS
CTCATTAGATCAGAAAAGGA+TGG 0.606155 8_3:-12257052 Msa1277120:CDS
GCCGGAATCCTATCTTCTTG+AGG 0.606322 8_3:+12254383 None:intergenic
AAGCCATTGAAGACAAAGAA+CGG 0.607033 8_3:+12260619 None:intergenic
CTGAATAGAGAGGGTACTGA+GGG 0.609191 8_3:+12257014 None:intergenic
CATGGGGAGTGTGGAAAGCG+AGG 0.612956 8_3:-12255605 Msa1277120:CDS
TTTGATGGAACTCTGTCAAG+CGG 0.614854 8_3:+12254351 None:intergenic
TTGGAAGATGCCAAGTCCAA+GGG 0.616464 8_3:-12256430 Msa1277120:CDS
TTCTTGCTGAGGAAAATCAA+CGG 0.620444 8_3:-12256245 Msa1277120:CDS
ACCTGTCCAAAACCAGAACC+AGG 0.621813 8_3:+12254871 None:intergenic
GCTGAATAGAGAGGGTACTG+AGG 0.624000 8_3:+12257013 None:intergenic
CAGCGGATTTCCGCATTGTG+TGG 0.629122 8_3:+12260724 None:intergenic
GCAATAGAAGGCATCAGGTG+CGG 0.630196 8_3:+12254930 None:intergenic
GCTGGAATTGAGGAGCGCGA+TGG 0.630272 8_3:-12257266 Msa1277120:CDS
GTGCCTGAATCTGTCTGCAG+CGG 0.634809 8_3:+12260707 None:intergenic
AAAGGCTATCAAAGCTGCAG+AGG 0.637012 8_3:-12254962 Msa1277120:CDS
TTACCAGCTGGCCACCATGG+AGG 0.637475 8_3:+12256981 None:intergenic
TAATTGAGGCTGAATAGAGA+GGG 0.644456 8_3:+12257005 None:intergenic
AATTTGTTCCCTCACATCTG+GGG 0.645832 8_3:+12255556 None:intergenic
ACACCCCTTAAATTTATAGG+GGG 0.654945 8_3:+12254281 None:intergenic
GATTTCCGCATTGTGTGGTG+TGG 0.663207 8_3:+12260729 None:intergenic
TTTGGCATCAGGCTATCATG+GGG 0.665460 8_3:-12255621 Msa1277120:intron
ACCCACCACACCACACAATG+CGG 0.668121 8_3:-12260734 Msa1277120:exon
CCATTGAAGACAAAGAACGG+AGG 0.677733 8_3:+12260622 None:intergenic
AAAGCGAGGAGGTTATATGG+AGG 0.681303 8_3:-12255591 Msa1277120:CDS
TTGATGAAGCAACTGGTTGG+GGG 0.682358 8_3:-12256480 Msa1277120:CDS
TTGGACAAAAGTGAAACACA+GGG 0.683072 8_3:-12258020 Msa1277120:CDS
GCCTCAATTACCCTCCATGG+TGG 0.683447 8_3:-12256992 Msa1277120:CDS
TAAACCCCGGCAATCCAACA+GGG 0.689339 8_3:-12256381 Msa1277120:CDS
AGGAACAACAACAATTCCAG+TGG 0.692125 8_3:+12254891 None:intergenic
GGGGAGTGTGGAAAGCGAGG+AGG 0.694971 8_3:-12255602 Msa1277120:CDS
ATGTCTGTAGGTTCTTGCTG+AGG 0.696225 8_3:-12256256 Msa1277120:intron
TTAAGGACAGAAAAGAACAG+AGG 0.697261 8_3:+12254026 None:intergenic
ATTGAAGACAAAGAACGGAG+GGG 0.701204 8_3:+12260624 None:intergenic
ATCGCGCTCCTCAATTCCAG+CGG 0.721398 8_3:+12257268 None:intergenic
TGCGAAGTTGAAAAGTAACG+TGG 0.724434 8_3:+12260792 None:intergenic
GCGAAGTTGAAAAGTAACGT+GGG 0.752268 8_3:+12260793 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAATTTTTCTTTAAG+AGG + chr8_3:12259445-12259464 None:intergenic 10.0%
!!! CTTAAAGAAAAATTTATTTT+TGG - chr8_3:12259445-12259464 Msa1277120:intron 10.0%
!!! ATTAGTTTATAATCAATAAA+AGG + chr8_3:12260418-12260437 None:intergenic 10.0%
!! AAAAACAAAAAACAACAAAA+CGG + chr8_3:12254393-12254412 None:intergenic 15.0%
!!! TTTTGTTGTTTTTTGTTTTT+AGG - chr8_3:12254393-12254412 Msa1277120:CDS 15.0%
!! AAAACAAAAAACAACAAAAA+GGG + chr8_3:12254529-12254548 None:intergenic 15.0%
!! AAAAACAAAAAACAACAAAA+AGG + chr8_3:12254393-12254412 None:intergenic 15.0%
!!! CTTTTTCAATTTTTTTATGT+GGG - chr8_3:12254577-12254596 Msa1277120:intron 15.0%
!! AAAACAAAAAATAACAATCA+AGG + chr8_3:12254781-12254800 None:intergenic 15.0%
!!! GATTGTTATTTTTTGTTTTT+AGG - chr8_3:12254782-12254801 Msa1277120:intron 15.0%
!! CAAACAAACTTATAAATTAA+GGG + chr8_3:12254919-12254938 None:intergenic 15.0%
!! ACAAACAAACTTATAAATTA+AGG + chr8_3:12254920-12254939 None:intergenic 15.0%
!!! GTATTTGGTTTTTTTATTAT+CGG - chr8_3:12256012-12256031 Msa1277120:intron 15.0%
!!! TATTTGGTTTTTTTATTATC+GGG - chr8_3:12256013-12256032 Msa1277120:intron 15.0%
!! TAATTTATAAAGACAATAAG+AGG + chr8_3:12257356-12257375 None:intergenic 15.0%
!!! GTTTATCATATTTGATAATA+TGG - chr8_3:12258596-12258615 Msa1277120:intron 15.0%
!!! AGAAAATTTTACACTAATAT+TGG - chr8_3:12260302-12260321 Msa1277120:intron 15.0%
!! ATATTTACTTACAATTTCAT+TGG + chr8_3:12260328-12260347 None:intergenic 15.0%
!! ATTTAAATTATTGTCTTTCA+AGG - chr8_3:12260444-12260463 Msa1277120:intron 15.0%
!! CATTGTTAAATATATCAATT+GGG + chr8_3:12260631-12260650 None:intergenic 15.0%
!! TCATTGTTAAATATATCAAT+TGG + chr8_3:12260632-12260651 None:intergenic 15.0%
!! ATTGATATATTTAACAATGA+TGG - chr8_3:12260632-12260651 Msa1277120:CDS 15.0%
!! TTGATATATTTAACAATGAT+GGG - chr8_3:12260633-12260652 Msa1277120:CDS 15.0%
!! TTTATATATTGTGAGAAAGA+TGG + chr8_3:12254132-12254151 None:intergenic 20.0%
!! AAAACAAAAAACAACAAAAC+GGG + chr8_3:12254392-12254411 None:intergenic 20.0%
!!! GCTTTTTCAATTTTTTTATG+TGG - chr8_3:12254576-12254595 Msa1277120:intron 20.0%
!!! CAACTTTTGATTGAATTATT+GGG - chr8_3:12254732-12254751 Msa1277120:intron 20.0%
!!! AACTTTTGATTGAATTATTG+GGG - chr8_3:12254733-12254752 Msa1277120:intron 20.0%
!!! TTATTTTTTGTTTTTAGGTG+TGG - chr8_3:12254787-12254806 Msa1277120:intron 20.0%
!!! TAAGCTTTTTATTGAATTAG+TGG - chr8_3:12254987-12255006 Msa1277120:CDS 20.0%
!!! AAGCTTTTTATTGAATTAGT+GGG - chr8_3:12254988-12255007 Msa1277120:CDS 20.0%
!!! AATTAGTGGGTTTTTAATTT+TGG - chr8_3:12255001-12255020 Msa1277120:CDS 20.0%
!!! ATTAGTGGGTTTTTAATTTT+GGG - chr8_3:12255002-12255021 Msa1277120:CDS 20.0%
!!! TTTTAATTTTGGGGTTTATA+AGG - chr8_3:12255012-12255031 Msa1277120:CDS 20.0%
!!! TTTAATTTTGGGGTTTATAA+GGG - chr8_3:12255013-12255032 Msa1277120:CDS 20.0%
!!! AAAACAGTTTTGTTAAATTG+CGG - chr8_3:12255619-12255638 Msa1277120:intron 20.0%
!! TACTAAGTTTCTAATTATAG+TGG - chr8_3:12256928-12256947 Msa1277120:intron 20.0%
!!! ACTATCATTTCTCTATTTTT+AGG - chr8_3:12257790-12257809 Msa1277120:intron 20.0%
!!! CGCAAATCATAATTTAATTT+AGG - chr8_3:12257947-12257966 Msa1277120:intron 20.0%
!! AGAATACAAATCAGAAAAAA+TGG - chr8_3:12258211-12258230 Msa1277120:intron 20.0%
!! ATTTGAACAAACCATTATTT+CGG - chr8_3:12258935-12258954 Msa1277120:CDS 20.0%
!!! ATTTTTTTGTTGAAACCATA+TGG - chr8_3:12258984-12259003 Msa1277120:intron 20.0%
!! GTAAAACTCAATATCAAATT+AGG + chr8_3:12259559-12259578 None:intergenic 20.0%
!! TAATGTATAAAAGAATTGCT+AGG + chr8_3:12259706-12259725 None:intergenic 20.0%
!! TGTAATTACTTTACTGTTTA+TGG + chr8_3:12259740-12259759 None:intergenic 20.0%
!! CAATGCATTTACAAATAAAT+CGG + chr8_3:12260051-12260070 None:intergenic 20.0%
!! ATAATTGTAGATAAAATGAG+AGG + chr8_3:12260107-12260126 None:intergenic 20.0%
!!! TCTCATTTTATCTACAATTA+TGG - chr8_3:12260106-12260125 Msa1277120:intron 20.0%
!!! TAAAATCTTTTAAAAGTCAC+TGG + chr8_3:12260220-12260239 None:intergenic 20.0%
! TAAAAAAACACAAAACCTGA+GGG + chr8_3:12254329-12254348 None:intergenic 25.0%
! ATAAAAAAACACAAAACCTG+AGG + chr8_3:12254330-12254349 None:intergenic 25.0%
! ACTGAAAAACAAGAATCAAA+GGG + chr8_3:12254355-12254374 None:intergenic 25.0%
!!! TCGATTATTTGATTTGATGT+AGG - chr8_3:12254445-12254464 Msa1277120:intron 25.0%
! CCAATAATTCAATCAAAAGT+TGG + chr8_3:12254734-12254753 None:intergenic 25.0%
!!! CCAACTTTTGATTGAATTAT+TGG - chr8_3:12254731-12254750 Msa1277120:intron 25.0%
!!! ACTTTTGATTGAATTATTGG+GGG - chr8_3:12254734-12254753 Msa1277120:intron 25.0%
!! TTGAACTTTCAGTTTTTGAT+TGG - chr8_3:12254824-12254843 Msa1277120:intron 25.0%
!!! TGAACTTTCAGTTTTTGATT+GGG - chr8_3:12254825-12254844 Msa1277120:intron 25.0%
! ATGCTTCTGTAATTACATAA+GGG - chr8_3:12254870-12254889 Msa1277120:intron 25.0%
!! TGTAATTACATAAGGGTTTT+GGG - chr8_3:12254877-12254896 Msa1277120:CDS 25.0%
!!! TTAGTGGGTTTTTAATTTTG+GGG - chr8_3:12255003-12255022 Msa1277120:CDS 25.0%
!! TGTAGTTTTTGCTAAAATTG+TGG - chr8_3:12255306-12255325 Msa1277120:intron 25.0%
! CGACAAAAACTATTCTTTAT+TGG - chr8_3:12255424-12255443 Msa1277120:intron 25.0%
!!! TTGGTGAAGTATTATGTTTT+TGG - chr8_3:12255443-12255462 Msa1277120:intron 25.0%
!!! TGGTGAAGTATTATGTTTTT+GGG - chr8_3:12255444-12255463 Msa1277120:intron 25.0%
!!! ATTTTGAATCAGTGTTTTGA+TGG + chr8_3:12255755-12255774 None:intergenic 25.0%
! GATAACATGTTATATCTACA+AGG + chr8_3:12256328-12256347 None:intergenic 25.0%
! TAGCATGTTGTTATATAGAT+TGG + chr8_3:12256374-12256393 None:intergenic 25.0%
!! TTCTACACTGATTGATAAAT+AGG + chr8_3:12256422-12256441 None:intergenic 25.0%
! TAGATAATTTACTGCAACAT+TGG - chr8_3:12256682-12256701 Msa1277120:intron 25.0%
!! TTGTTTCTTACAATTCTGTA+TGG - chr8_3:12256753-12256772 Msa1277120:intron 25.0%
!!! CAATTACAATTTTGATACTG+TGG + chr8_3:12257015-12257034 None:intergenic 25.0%
!! CATTTTTACAATGTTGTACT+CGG - chr8_3:12257065-12257084 Msa1277120:CDS 25.0%
!! TCTTTTGTTACTGATGATTT+TGG - chr8_3:12257103-12257122 Msa1277120:intron 25.0%
! ACTTTGTACTAAATAGTGTA+TGG + chr8_3:12257227-12257246 None:intergenic 25.0%
!! AAATTATGTTTTTCCTAGTG+TGG - chr8_3:12257370-12257389 Msa1277120:intron 25.0%
! ATTGATTGGGTTATCTAATT+TGG - chr8_3:12257498-12257517 Msa1277120:intron 25.0%
! GAAAATTATCGAAAGCAAAT+TGG + chr8_3:12257705-12257724 None:intergenic 25.0%
! ATTACTCATTAGATCAGAAA+AGG - chr8_3:12257829-12257848 Msa1277120:intron 25.0%
! AAATCAGAAAAAATGGTCTA+TGG - chr8_3:12258218-12258237 Msa1277120:intron 25.0%
!! GTTACTTTGAAAATCTTAGT+TGG - chr8_3:12258304-12258323 Msa1277120:intron 25.0%
!! GAGCTATGCTTTTATATTAT+GGG - chr8_3:12258326-12258345 Msa1277120:intron 25.0%
!! AGCTATGCTTTTATATTATG+GGG - chr8_3:12258327-12258346 Msa1277120:intron 25.0%
!!! GATTTTGTTATTGTTTCTGA+AGG - chr8_3:12258370-12258389 Msa1277120:intron 25.0%
!! TTACAATGGAGTGTTAATAT+AGG - chr8_3:12258542-12258561 Msa1277120:intron 25.0%
! TACAAAATATCCTCAAATAG+CGG - chr8_3:12258893-12258912 Msa1277120:intron 25.0%
!! GACTTTTATGTTATGCTAAT+AGG - chr8_3:12259213-12259232 Msa1277120:intron 25.0%
!!! ATTTTTCTTTAAGAGGCAAA+GGG + chr8_3:12259438-12259457 None:intergenic 25.0%
!!! AATTTTTCTTTAAGAGGCAA+AGG + chr8_3:12259439-12259458 None:intergenic 25.0%
!! GGTTATAATTCTTCATTTTG+TGG - chr8_3:12259466-12259485 Msa1277120:intron 25.0%
! TTCTGAATTTACTCATTGTT+GGG + chr8_3:12259779-12259798 None:intergenic 25.0%
! TTTCTGAATTTACTCATTGT+TGG + chr8_3:12259780-12259799 None:intergenic 25.0%
!!! AGAAGCTTTAAACAAATTAG+AGG - chr8_3:12259839-12259858 Msa1277120:intron 25.0%
!!! GAAGCTTTAAACAAATTAGA+GGG - chr8_3:12259840-12259859 Msa1277120:intron 25.0%
!!! GTATTGACAACTTTGTTTTT+TGG - chr8_3:12260154-12260173 Msa1277120:intron 25.0%
!! TTTTTCCCCCTATAAATTTA+AGG - chr8_3:12260599-12260618 Msa1277120:CDS 25.0%
!! TTTTCCCCCTATAAATTTAA+GGG - chr8_3:12260600-12260619 Msa1277120:CDS 25.0%
!! TAATATTTTGAGCGGTAACA+GGG + chr8_3:12254305-12254324 None:intergenic 30.0%
!! TTAATATTTTGAGCGGTAAC+AGG + chr8_3:12254306-12254325 None:intergenic 30.0%
CACTGAAAAACAAGAATCAA+AGG + chr8_3:12254356-12254375 None:intergenic 30.0%
!!! CTTTGATTCTTGTTTTTCAG+TGG - chr8_3:12254354-12254373 Msa1277120:CDS 30.0%
ATGCTTCTGTGATTACATAA+GGG - chr8_3:12254621-12254640 Msa1277120:intron 30.0%
!!! TTACATAAGGGTTTTGGATT+TGG - chr8_3:12254633-12254652 Msa1277120:intron 30.0%
ATTTGCATGCAAAATTGATG+TGG - chr8_3:12254694-12254713 Msa1277120:intron 30.0%
!! GAACTTTCAGTTTTTGATTG+GGG - chr8_3:12254826-12254845 Msa1277120:intron 30.0%
GATGCTTCTGTAATTACATA+AGG - chr8_3:12254869-12254888 Msa1277120:intron 30.0%
! CTGTAATTACATAAGGGTTT+TGG - chr8_3:12254876-12254895 Msa1277120:CDS 30.0%
TTGTATGCAAAATTGATGTG+TGG - chr8_3:12254944-12254963 Msa1277120:CDS 30.0%
!!! CTGATCTTTTGTTTTTGCTT+TGG - chr8_3:12255075-12255094 Msa1277120:intron 30.0%
!! TTTTTGCTTTGGTTTCTGTT+TGG - chr8_3:12255086-12255105 Msa1277120:intron 30.0%
! TTTTGGCAAAAGACATGTTA+TGG - chr8_3:12255212-12255231 Msa1277120:intron 30.0%
! AGTTTTTGCTAAAATTGTGG+CGG - chr8_3:12255309-12255328 Msa1277120:intron 30.0%
GTGCATATACATGTTTAGAT+TGG + chr8_3:12255363-12255382 None:intergenic 30.0%
CTAAACATGTATATGCACTT+AGG - chr8_3:12255365-12255384 Msa1277120:intron 30.0%
!!! AATGGTTTTTTTTCCTGCTT+AGG - chr8_3:12255502-12255521 Msa1277120:CDS 30.0%
GACACAATCTTAGTATATAC+AGG + chr8_3:12255591-12255610 None:intergenic 30.0%
CATATTAGACAAGATGTGAA+GGG - chr8_3:12255677-12255696 Msa1277120:intron 30.0%
CATGTTTGTATGCAAATGTT+TGG - chr8_3:12255723-12255742 Msa1277120:intron 30.0%
! TTCAAAATTTTGTCCTGACT+TGG - chr8_3:12255767-12255786 Msa1277120:CDS 30.0%
!! ATATTCTACTCAAAGTACTG+TGG + chr8_3:12255827-12255846 None:intergenic 30.0%
TTCATATCTTCTGCAGTATT+TGG - chr8_3:12255997-12256016 Msa1277120:intron 30.0%
!!! TGGTTTTTTTATTATCGGGA+TGG - chr8_3:12256017-12256036 Msa1277120:intron 30.0%
ATGCTATAAAGCTTCTGATA+GGG - chr8_3:12256061-12256080 Msa1277120:intron 30.0%
TGACAAATTAAACTGTTACG+TGG - chr8_3:12256182-12256201 Msa1277120:intron 30.0%
CAGTGTAGAAGTTCAAAAAA+TGG - chr8_3:12256432-12256451 Msa1277120:CDS 30.0%
!! AATATACAGCTAGAAGTATC+TGG - chr8_3:12256473-12256492 Msa1277120:CDS 30.0%
GTATGAATGTGAATCTAACA+CGG - chr8_3:12256495-12256514 Msa1277120:CDS 30.0%
AATGTTGTGCTTCTATCTTT+CGG - chr8_3:12256530-12256549 Msa1277120:intron 30.0%
ATTGTAAGAAACAAACCTCT+CGG + chr8_3:12256747-12256766 None:intergenic 30.0%
!!! AATCTTAGTGGTTTTGTCTA+TGG - chr8_3:12256957-12256976 Msa1277120:intron 30.0%
CGAGTACAACATTGTAAAAA+TGG + chr8_3:12257067-12257086 None:intergenic 30.0%
TAATTAGTGTTGTCACATAG+AGG - chr8_3:12257142-12257161 Msa1277120:intron 30.0%
TTGTACTAAATAGTGTATGG+CGG + chr8_3:12257224-12257243 None:intergenic 30.0%
ACACTATTTAGTACAAAGTG+TGG - chr8_3:12257228-12257247 Msa1277120:CDS 30.0%
GCACTGCAAATATAAATGAA+AGG + chr8_3:12257400-12257419 None:intergenic 30.0%
TGGAAATATGAACAGTTTCA+TGG + chr8_3:12257563-12257582 None:intergenic 30.0%
ACTGTTCATATTTCCATATC+AGG - chr8_3:12257567-12257586 Msa1277120:intron 30.0%
CTGTTCATATTTCCATATCA+GGG - chr8_3:12257568-12257587 Msa1277120:intron 30.0%
AAAATGTCATTGGCATTACA+AGG + chr8_3:12257649-12257668 None:intergenic 30.0%
ATCTGTCAAGAAAATGTCAT+TGG + chr8_3:12257659-12257678 None:intergenic 30.0%
! AATGACATTTTCTTGACAGA+TGG - chr8_3:12257658-12257677 Msa1277120:intron 30.0%
TGAGTAATTGCATCATCATA+TGG + chr8_3:12257817-12257836 None:intergenic 30.0%
TAAAAGAAAACTTTACCAGC+TGG + chr8_3:12257919-12257938 None:intergenic 30.0%
TTCCAAATTATGCTATGCTT+TGG + chr8_3:12258046-12258065 None:intergenic 30.0%
! CTGATTTGTATTCTTGAAGA+TGG + chr8_3:12258205-12258224 None:intergenic 30.0%
AAAAAATGGTCTATGGTCTA+TGG - chr8_3:12258225-12258244 Msa1277120:intron 30.0%
ACAAATATGCATGCATCATT+GGG - chr8_3:12258269-12258288 Msa1277120:intron 30.0%
! GGAGCTATGCTTTTATATTA+TGG - chr8_3:12258325-12258344 Msa1277120:intron 30.0%
! TGCTTTTATATTATGGGGAT+TGG - chr8_3:12258332-12258351 Msa1277120:intron 30.0%
! TTTATATTATGGGGATTGGT+TGG - chr8_3:12258336-12258355 Msa1277120:intron 30.0%
GTTGCTTCATCAAGATAATA+TGG + chr8_3:12258398-12258417 None:intergenic 30.0%
TATTATCTTGATGAAGCAAC+TGG - chr8_3:12258398-12258417 Msa1277120:intron 30.0%
! GTAGAATTTTGCAAGAAAGA+AGG - chr8_3:12258669-12258688 Msa1277120:intron 30.0%
! ATTTTGCAAGAAAGAAGGTT+TGG - chr8_3:12258674-12258693 Msa1277120:intron 30.0%
CAAATTCTGATACACTATAG+TGG + chr8_3:12258838-12258857 None:intergenic 30.0%
ATAGAGAATTGCCGAAATAA+TGG + chr8_3:12258949-12258968 None:intergenic 30.0%
AAAGAGTGAAATTTCTTCTC+AGG + chr8_3:12259076-12259095 None:intergenic 30.0%
GAAATTTCACTCTTTCAAGA+AGG - chr8_3:12259081-12259100 Msa1277120:intron 30.0%
! CAAACAGAGACATTTTCAAT+CGG + chr8_3:12259248-12259267 None:intergenic 30.0%
GAGGGAACAAATTTATAAAG+TGG - chr8_3:12259339-12259358 Msa1277120:intron 30.0%
AATCTTTGTTCTAACATCAC+TGG - chr8_3:12259370-12259389 Msa1277120:intron 30.0%
AACACTAACCTCAATTAAGA+TGG - chr8_3:12259495-12259514 Msa1277120:intron 30.0%
TAACCTCAATTAAGATGGTT+TGG - chr8_3:12259500-12259519 Msa1277120:intron 30.0%
TACTTTACTGTTTATGGTTG+TGG + chr8_3:12259734-12259753 None:intergenic 30.0%
TTGTAGATAAAATGAGAGGA+TGG + chr8_3:12260103-12260122 None:intergenic 30.0%
! TGCGTGAATTATCTTGATTT+TGG - chr8_3:12260368-12260387 Msa1277120:intron 30.0%
GATTGAAAATGCAACTTAGT+AGG + chr8_3:12260396-12260415 None:intergenic 30.0%
TTTCCCCCTATAAATTTAAG+GGG - chr8_3:12260601-12260620 Msa1277120:CDS 30.0%
GTTACATGATGAAAGAAACT+AGG - chr8_3:12260735-12260754 Msa1277120:exon 30.0%
AAACAAGTGAACGGTTGAAA+AGG + chr8_3:12254203-12254222 None:intergenic 35.0%
!!! ACCGTTCACTTGTTTTTGTT+CGG - chr8_3:12254208-12254227 Msa1277120:three_prime_UTR 35.0%
TCCGAACAAAAACAAGTGAA+CGG + chr8_3:12254212-12254231 None:intergenic 35.0%
AAGCCATTGAAGACAAAGAA+CGG + chr8_3:12254269-12254288 None:intergenic 35.0%
!! CTGAGGGTTAATATTTTGAG+CGG + chr8_3:12254313-12254332 None:intergenic 35.0%
GATGCTTCTGTGATTACATA+AGG - chr8_3:12254620-12254639 Msa1277120:intron 35.0%
! CTGTGATTACATAAGGGTTT+TGG - chr8_3:12254627-12254646 Msa1277120:intron 35.0%
! ATTGGGGTTTTTGATCATGA+TGG - chr8_3:12254842-12254861 Msa1277120:intron 35.0%
ATTATAATGATGTGCGACTG+AGG - chr8_3:12255045-12255064 Msa1277120:CDS 35.0%
CGCACAAAAACAAAGCAAAA+AGG + chr8_3:12255169-12255188 None:intergenic 35.0%
AAAACTATTCACTGATCCCA+TGG + chr8_3:12255195-12255214 None:intergenic 35.0%
! TGGGATCAGTGAATAGTTTT+TGG - chr8_3:12255195-12255214 Msa1277120:intron 35.0%
! GCTTAGTGTATGTTTGAGTT+CGG - chr8_3:12255259-12255278 Msa1277120:CDS 35.0%
CAATGAGTTCAGCAAAATCA+CGG + chr8_3:12255339-12255358 None:intergenic 35.0%
CCTTCACATCTTGTCTAATA+TGG + chr8_3:12255679-12255698 None:intergenic 35.0%
CCATATTAGACAAGATGTGA+AGG - chr8_3:12255676-12255695 Msa1277120:intron 35.0%
TGCATACAAACATGTCATTG+CGG + chr8_3:12255717-12255736 None:intergenic 35.0%
!!! TTGAATCAGTGTTTTGATGG+CGG + chr8_3:12255752-12255771 None:intergenic 35.0%
TTTATGAAATGTGCCAAGTC+AGG + chr8_3:12255783-12255802 None:intergenic 35.0%
TTGCAAGTTCTGCAACATTA+AGG + chr8_3:12255917-12255936 None:intergenic 35.0%
! TTATCGGGATGGCTTTTAAA+AGG - chr8_3:12256028-12256047 Msa1277120:intron 35.0%
! GAAGCTTTATAGCATCATCA+TGG + chr8_3:12256056-12256075 None:intergenic 35.0%
GATGCTATAAAGCTTCTGAT+AGG - chr8_3:12256060-12256079 Msa1277120:intron 35.0%
!!! TAGTAGGCAGCCTTATTTTA+TGG - chr8_3:12256116-12256135 Msa1277120:intron 35.0%
TGGATCGTGTCCATAAAATA+AGG + chr8_3:12256129-12256148 None:intergenic 35.0%
TTTGTCACGATATATCCTAG+AGG + chr8_3:12256169-12256188 None:intergenic 35.0%
CTGAATAAAATCTATGCAGC+AGG + chr8_3:12256587-12256606 None:intergenic 35.0%
ATTGGAAATCCTCAATCTCT+AGG - chr8_3:12256700-12256719 Msa1277120:intron 35.0%
ACCTCTCGGAAAAAAGTAAT+TGG + chr8_3:12256733-12256752 None:intergenic 35.0%
! TTTTACAATCTCATCTCTGC+AGG - chr8_3:12256813-12256832 Msa1277120:intron 35.0%
TTTGGACAAAAGTGAAACAC+AGG - chr8_3:12256864-12256883 Msa1277120:intron 35.0%
TTGGACAAAAGTGAAACACA+GGG - chr8_3:12256865-12256884 Msa1277120:intron 35.0%
! TAGTGGATCAGTAATCTTAG+TGG - chr8_3:12256945-12256964 Msa1277120:intron 35.0%
! CTAATATTTTCCGTGATCCA+TGG - chr8_3:12257307-12257326 Msa1277120:intron 35.0%
AAAACCAATGTTGTCAACCA+TGG + chr8_3:12257327-12257346 None:intergenic 35.0%
CAATACCTGACTATGACTAT+AGG + chr8_3:12257482-12257501 None:intergenic 35.0%
!! AGTCATAGTCAGGTATTGAT+TGG - chr8_3:12257484-12257503 Msa1277120:intron 35.0%
!! GTCATAGTCAGGTATTGATT+GGG - chr8_3:12257485-12257504 Msa1277120:intron 35.0%
ATTACCCCTTTACTATTCAC+TGG - chr8_3:12257532-12257551 Msa1277120:intron 35.0%
TTACCCCTTTACTATTCACT+GGG - chr8_3:12257533-12257552 Msa1277120:intron 35.0%
! ATTTCCATATCAGGGTATTC+AGG - chr8_3:12257576-12257595 Msa1277120:intron 35.0%
! TTTCCATATCAGGGTATTCA+GGG - chr8_3:12257577-12257596 Msa1277120:intron 35.0%
CAAATTGGAAACATACTGCT+GGG + chr8_3:12257690-12257709 None:intergenic 35.0%
CTCATTAGATCAGAAAAGGA+TGG - chr8_3:12257833-12257852 Msa1277120:intron 35.0%
TAATTGAGGCTGAATAGAGA+GGG + chr8_3:12257883-12257902 None:intergenic 35.0%
TTAGCAGTGTTGTCAAATGA+TGG - chr8_3:12258001-12258020 Msa1277120:intron 35.0%
TGCCAAAGCATAGCATAATT+TGG - chr8_3:12258041-12258060 Msa1277120:CDS 35.0%
GACAAATATGCATGCATCAT+TGG - chr8_3:12258268-12258287 Msa1277120:intron 35.0%
! CAATGGAGTGTTAATATAGG+AGG - chr8_3:12258545-12258564 Msa1277120:intron 35.0%
TTCTTGCTGAGGAAAATCAA+CGG - chr8_3:12258640-12258659 Msa1277120:intron 35.0%
!!! GAAAGAAGGTTTGGTTCTTT+TGG - chr8_3:12258683-12258702 Msa1277120:intron 35.0%
ATTCTGATACACTATAGTGG+CGG + chr8_3:12258835-12258854 None:intergenic 35.0%
AAGAATGCTATTGTGCCATA+TGG + chr8_3:12259002-12259021 None:intergenic 35.0%
! CTGCACGAAATTCATTTTGT+AGG - chr8_3:12259027-12259046 Msa1277120:intron 35.0%
!! ACTCTTTCAAGAAGGTATCT+CGG - chr8_3:12259089-12259108 Msa1277120:intron 35.0%
!! TCATTATACCGACTTACCTT+TGG + chr8_3:12259167-12259186 None:intergenic 35.0%
CGATTGAAAATGTCTCTGTT+TGG - chr8_3:12259246-12259265 Msa1277120:intron 35.0%
! AAATTTGTTCCCTCACATCT+GGG + chr8_3:12259333-12259352 None:intergenic 35.0%
! TAAATTTGTTCCCTCACATC+TGG + chr8_3:12259334-12259353 None:intergenic 35.0%
GTTCCAAACCATCTTAATTG+AGG + chr8_3:12259506-12259525 None:intergenic 35.0%
TTGTCATTGAGTGAATACCA+TGG - chr8_3:12259587-12259606 Msa1277120:intron 35.0%
ATTTACTCATTGTTGGGATG+AGG + chr8_3:12259773-12259792 None:intergenic 35.0%
AAGTAAGCGTTTGCAATAGA+AGG + chr8_3:12259970-12259989 None:intergenic 35.0%
TTATTGTCTTTCAAGGTTCC+CGG - chr8_3:12260451-12260470 Msa1277120:intron 35.0%
CCTATCTTCTTGAGGTAATA+TGG + chr8_3:12260497-12260516 None:intergenic 35.0%
CCATATTACCTCAAGAAGAT+AGG - chr8_3:12260494-12260513 Msa1277120:intron 35.0%
AGAGTTCCATCAAAAGTTCA+TGG - chr8_3:12260543-12260562 Msa1277120:intron 35.0%
! ACTCATCCATGAACTTTTGA+TGG + chr8_3:12260552-12260571 None:intergenic 35.0%
ACACCCCTTAAATTTATAGG+GGG + chr8_3:12260607-12260626 None:intergenic 35.0%
CACACCCCTTAAATTTATAG+GGG + chr8_3:12260608-12260627 None:intergenic 35.0%
GCACACCCCTTAAATTTATA+GGG + chr8_3:12260609-12260628 None:intergenic 35.0%
!!! GTTTTGTGCTTTGAGAAACT+AGG - chr8_3:12260655-12260674 Msa1277120:CDS 35.0%
GCGAAGTTGAAAAGTAACGT+GGG + chr8_3:12254095-12254114 None:intergenic 40.0%
TGCGAAGTTGAAAAGTAACG+TGG + chr8_3:12254096-12254115 None:intergenic 40.0%
ATTGAAGACAAAGAACGGAG+GGG + chr8_3:12254264-12254283 None:intergenic 40.0%
CATTGAAGACAAAGAACGGA+GGG + chr8_3:12254265-12254284 None:intergenic 40.0%
CGCTCAAAATATTAACCCTC+AGG - chr8_3:12254311-12254330 Msa1277120:exon 40.0%
ATTGATGTGGCTGTTGATCA+AGG - chr8_3:12254707-12254726 Msa1277120:intron 40.0%
TTGATGTGGCTGTTGATCAA+GGG - chr8_3:12254708-12254727 Msa1277120:intron 40.0%
TGCAAAATTGATGTGTGGTG+TGG - chr8_3:12254949-12254968 Msa1277120:CDS 40.0%
TGGTGTGGTTGTTGATCAAA+GGG - chr8_3:12254964-12254983 Msa1277120:CDS 40.0%
!!! TTTGTTTTTGTGCGCTACCA+TGG - chr8_3:12255175-12255194 Msa1277120:intron 40.0%
!!! TTGTTTTTGTGCGCTACCAT+GGG - chr8_3:12255176-12255195 Msa1277120:intron 40.0%
! GTTTGAGTTCGGTGAAATCA+CGG - chr8_3:12255270-12255289 Msa1277120:intron 40.0%
! CAGTGACATGTCTGAAACAA+TGG - chr8_3:12255484-12255503 Msa1277120:CDS 40.0%
TGACATTTCAGAACCTAAGC+AGG + chr8_3:12255518-12255537 None:intergenic 40.0%
AAATGTCAGTATGCTGTTCG+AGG - chr8_3:12255530-12255549 Msa1277120:CDS 40.0%
AGAGATTGTTACACTTGCTC+AGG - chr8_3:12255553-12255572 Msa1277120:CDS 40.0%
AAACGAATGAGCATCTGGAT+TGG + chr8_3:12255953-12255972 None:intergenic 40.0%
TCATCAAACGAATGAGCATC+TGG + chr8_3:12255958-12255977 None:intergenic 40.0%
AGATGCTCATTCGTTTGATG+AGG - chr8_3:12255957-12255976 Msa1277120:intron 40.0%
TTCTGATAGGGTCATCAGAA+GGG - chr8_3:12256073-12256092 Msa1277120:intron 40.0%
ATGCAGCAGGTTCATTACAT+TGG + chr8_3:12256574-12256593 None:intergenic 40.0%
GGAAAAAAGTAATTGGCTGC+TGG + chr8_3:12256726-12256745 None:intergenic 40.0%
!!! GCCAATTACTTTTTTCCGAG+AGG - chr8_3:12256729-12256748 Msa1277120:intron 40.0%
! ATGTGACTATCCTGCTCTTT+TGG - chr8_3:12256846-12256865 Msa1277120:intron 40.0%
!! TCACTTTTGTCCAAAAGAGC+AGG + chr8_3:12256859-12256878 None:intergenic 40.0%
TTGTCACATAGAGGCTATAG+CGG - chr8_3:12257151-12257170 Msa1277120:intron 40.0%
! AATAGTGTATGGCGGAACAA+TGG + chr8_3:12257216-12257235 None:intergenic 40.0%
TCTATAACACTGCAGCGTTA+TGG - chr8_3:12257272-12257291 Msa1277120:CDS 40.0%
ATGTTGTCAACCATGGATCA+CGG + chr8_3:12257320-12257339 None:intergenic 40.0%
TGATCCATGGTTGACAACAT+TGG - chr8_3:12257320-12257339 Msa1277120:intron 40.0%
AATGAAAGGTCAACCACACT+AGG + chr8_3:12257386-12257405 None:intergenic 40.0%
CTGATTCAATAGAGAGAGCT+TGG - chr8_3:12257419-12257438 Msa1277120:CDS 40.0%
AAACCCTGAATACCCTGATA+TGG + chr8_3:12257583-12257602 None:intergenic 40.0%
GCAAATTGGAAACATACTGC+TGG + chr8_3:12257691-12257710 None:intergenic 40.0%
GTAATTGAGGCTGAATAGAG+AGG + chr8_3:12257884-12257903 None:intergenic 40.0%
! TACTTGTCAATTGCGGATTG+TGG + chr8_3:12258170-12258189 None:intergenic 40.0%
ATCCGCAATTGACAAGTAGT+AGG - chr8_3:12258172-12258191 Msa1277120:CDS 40.0%
AGCCTACTACTTGTCAATTG+CGG + chr8_3:12258177-12258196 None:intergenic 40.0%
ATCTTGATGAAGCAACTGGT+TGG - chr8_3:12258402-12258421 Msa1277120:intron 40.0%
TCTTGATGAAGCAACTGGTT+GGG - chr8_3:12258403-12258422 Msa1277120:intron 40.0%
ATCTGAACTCAAGAAGCAGT+TGG - chr8_3:12258436-12258455 Msa1277120:intron 40.0%
GCTTTAGCTGTTATAAACCC+CGG - chr8_3:12258491-12258510 Msa1277120:intron 40.0%
AGGTGAGCTGCAAATTACAA+TGG - chr8_3:12258528-12258547 Msa1277120:intron 40.0%
GGAATTTCTGTCATGTCTGT+AGG - chr8_3:12258617-12258636 Msa1277120:intron 40.0%
TCTTGCTGAGGAAAATCAAC+GGG - chr8_3:12258641-12258660 Msa1277120:intron 40.0%
!!! TTTGGTTCTTTTGGCTGATG+AGG - chr8_3:12258692-12258711 Msa1277120:intron 40.0%
! AACAATAGTGCCGCTATTTG+AGG + chr8_3:12258906-12258925 None:intergenic 40.0%
! AGAGACATTTTCAATCGGTG+TGG + chr8_3:12259243-12259262 None:intergenic 40.0%
AAATGTCTCTGTTTGGCATC+AGG - chr8_3:12259253-12259272 Msa1277120:intron 40.0%
! AATTTGTTCCCTCACATCTG+GGG + chr8_3:12259332-12259351 None:intergenic 40.0%
TTTGATCATGAGTCCTCCTA+AGG - chr8_3:12259408-12259427 Msa1277120:intron 40.0%
TGAATACCATGGATCTTTGC+AGG - chr8_3:12259598-12259617 Msa1277120:intron 40.0%
! CGAGTCTTATGAGTCATTCA+TGG - chr8_3:12259628-12259647 Msa1277120:intron 40.0%
GAGCAATGTATCTGTTTCCT+CGG - chr8_3:12259886-12259905 Msa1277120:intron 40.0%
AAACGCTTACTTAATGCCAC+TGG - chr8_3:12259978-12259997 Msa1277120:intron 40.0%
AGGAACAACAACAATTCCAG+TGG + chr8_3:12259997-12260016 None:intergenic 40.0%
! ACTGGAATTGTTGTTGTTCC+TGG - chr8_3:12259996-12260015 Msa1277120:intron 40.0%
! ATTGTTGTTGTTCCTGGTTC+TGG - chr8_3:12260002-12260021 Msa1277120:intron 40.0%
ACCTCAAGAAGATAGGATTC+CGG - chr8_3:12260501-12260520 Msa1277120:intron 40.0%
TTTGATGGAACTCTGTCAAG+CGG + chr8_3:12260537-12260556 None:intergenic 40.0%
GGCACACCCCTTAAATTTAT+AGG + chr8_3:12260610-12260629 None:intergenic 40.0%
CCATTGAAGACAAAGAACGG+AGG + chr8_3:12254266-12254285 None:intergenic 45.0%
CCTCCGTTCTTTGTCTTCAA+TGG - chr8_3:12254263-12254282 Msa1277120:three_prime_UTR 45.0%
! TTTTGAGCGGTAACAGGGAA+AGG + chr8_3:12254300-12254319 None:intergenic 45.0%
GTGGTGTGGTTGTTGATCAA+AGG - chr8_3:12254963-12254982 Msa1277120:CDS 45.0%
TCTGTTTGGTTGTGTGACTG+AGG - chr8_3:12255100-12255119 Msa1277120:intron 45.0%
!! GTTTTGTTAAATTGCGGCCC+TGG - chr8_3:12255625-12255644 Msa1277120:intron 45.0%
ATGTCATTGCGGTCTATAGC+AGG + chr8_3:12255706-12255725 None:intergenic 45.0%
CTTCTGATAGGGTCATCAGA+AGG - chr8_3:12256072-12256091 Msa1277120:intron 45.0%
ACTCTGTGTGTGCTCATAGT+AGG - chr8_3:12256100-12256119 Msa1277120:intron 45.0%
! GTGAAACACAGGGTTTGTTC+AGG - chr8_3:12256875-12256894 Msa1277120:intron 45.0%
AGAGAGAGCTTGGCAAATTG+TGG - chr8_3:12257429-12257448 Msa1277120:CDS 45.0%
CAAATTGTGGATCAGATCCC+TGG - chr8_3:12257442-12257461 Msa1277120:CDS 45.0%
TGGTGCCTATAGTCATAGTC+AGG - chr8_3:12257474-12257493 Msa1277120:intron 45.0%
ACCGCCCAGTGAATAGTAAA+GGG + chr8_3:12257540-12257559 None:intergenic 45.0%
!! CTGAATAGAGAGGGTACTGA+GGG + chr8_3:12257874-12257893 None:intergenic 45.0%
AGTGCTATAGTTCCGCAGTT+TGG - chr8_3:12258085-12258104 Msa1277120:intron 45.0%
CTACACTCAGTACCAAACTG+CGG + chr8_3:12258100-12258119 None:intergenic 45.0%
AAACTGCTGCTATAGCGTAG+CGG - chr8_3:12258122-12258141 Msa1277120:intron 45.0%
CTTGATGAAGCAACTGGTTG+GGG - chr8_3:12258404-12258423 Msa1277120:intron 45.0%
TTGATGAAGCAACTGGTTGG+GGG - chr8_3:12258405-12258424 Msa1277120:intron 45.0%
TTGGAAGATGCCAAGTCCAA+GGG - chr8_3:12258455-12258474 Msa1277120:intron 45.0%
ATGTCTGTAGGTTCTTGCTG+AGG - chr8_3:12258629-12258648 Msa1277120:intron 45.0%
AGCGGCACTATTGTTTACAG+CGG - chr8_3:12258911-12258930 Msa1277120:intron 45.0%
!! AAGAAGGTATCTCGGTCCAT+GGG - chr8_3:12259097-12259116 Msa1277120:intron 45.0%
! TCTTTTCAGTCCGTCTCCAA+AGG - chr8_3:12259148-12259167 Msa1277120:intron 45.0%
!! TACCGACTTACCTTTGGAGA+CGG + chr8_3:12259161-12259180 None:intergenic 45.0%
TGTTTGGCATCAGGCTATCA+TGG - chr8_3:12259262-12259281 Msa1277120:intron 45.0%
GTTTGGCATCAGGCTATCAT+GGG - chr8_3:12259263-12259282 Msa1277120:intron 45.0%
TTTGGCATCAGGCTATCATG+GGG - chr8_3:12259264-12259283 Msa1277120:intron 45.0%
TGGAAAGCGAGGAGGTTATA+TGG - chr8_3:12259291-12259310 Msa1277120:intron 45.0%
AAAGCGAGGAGGTTATATGG+AGG - chr8_3:12259294-12259313 Msa1277120:intron 45.0%
GAGGTTATATGGAGGTGACT+GGG - chr8_3:12259302-12259321 Msa1277120:intron 45.0%
AGAGGCAAAGGGTTAACCTT+AGG + chr8_3:12259427-12259446 None:intergenic 45.0%
! ACGCTGAAGTACTAAGAACG+AGG - chr8_3:12259524-12259543 Msa1277120:intron 45.0%
TACCATGGATCTTTGCAGGT+TGG - chr8_3:12259602-12259621 Msa1277120:intron 45.0%
TGAGTCATTCATGGCTGAGA+AGG - chr8_3:12259637-12259656 Msa1277120:intron 45.0%
GAGTCATTCATGGCTGAGAA+GGG - chr8_3:12259638-12259657 Msa1277120:intron 45.0%
TACTCATTGTTGGGATGAGG+TGG + chr8_3:12259770-12259789 None:intergenic 45.0%
GTAACCTGCAACAAAGCAGA+AGG - chr8_3:12259864-12259883 Msa1277120:intron 45.0%
!! CTTTGATAGCCTTTTCAGGC+AGG + chr8_3:12259917-12259936 None:intergenic 45.0%
!! GCAGCTTTGATAGCCTTTTC+AGG + chr8_3:12259921-12259940 None:intergenic 45.0%
AAAGGCTATCAAAGCTGCAG+AGG - chr8_3:12259923-12259942 Msa1277120:intron 45.0%
!! CGTTTGCAATAGAAGGCATC+AGG + chr8_3:12259963-12259982 None:intergenic 45.0%
!!! GTTGTTCCTGGTTCTGGTTT+TGG - chr8_3:12260008-12260027 Msa1277120:intron 45.0%
TTGATGGAACTCTGTCAAGC+GGG + chr8_3:12260536-12260555 None:intergenic 45.0%
TAGGGGGAAAAAACTCAGTG+AGG + chr8_3:12260591-12260610 None:intergenic 45.0%
!! ATATAATTTATCATAATTAT+CGG + chr8_3:12260268-12260287 None:intergenic 5.0%
GATTTCCGCATTGTGTGGTG+TGG + chr8_3:12254159-12254178 None:intergenic 50.0%
AATCCGCTGCAGACAGATTC+AGG - chr8_3:12254175-12254194 Msa1277120:three_prime_UTR 50.0%
TTGGTTGTGTGACTGAGGAC+TGG - chr8_3:12255105-12255124 Msa1277120:intron 50.0%
TCCATGACACCATTCTGCCA+GGG + chr8_3:12255645-12255664 None:intergenic 50.0%
ATCCATGACACCATTCTGCC+AGG + chr8_3:12255646-12255665 None:intergenic 50.0%
GATAGGGTCATCAGAAGGGT+TGG - chr8_3:12256077-12256096 Msa1277120:intron 50.0%
! GGACACGATCCAAAAGTGTG+AGG - chr8_3:12256137-12256156 Msa1277120:intron 50.0%
AGTGCGTCACCACAAAAACG+AGG - chr8_3:12256252-12256271 Msa1277120:intron 50.0%
GTGCGTCACCACAAAAACGA+GGG - chr8_3:12256253-12256272 Msa1277120:intron 50.0%
!! CAGTCACACCCTCGTTTTTG+TGG + chr8_3:12256264-12256283 None:intergenic 50.0%
! TAGAGGCTATAGCGGTGCTA+CGG - chr8_3:12257159-12257178 Msa1277120:intron 50.0%
CCGCCCAGTGAATAGTAAAG+GGG + chr8_3:12257539-12257558 None:intergenic 50.0%
CCCCTTTACTATTCACTGGG+CGG - chr8_3:12257536-12257555 Msa1277120:intron 50.0%
GACCGCCCAGTGAATAGTAA+AGG + chr8_3:12257541-12257560 None:intergenic 50.0%
TTACGTGATGCAATAGCCGC+TGG - chr8_3:12257601-12257620 Msa1277120:intron 50.0%
TGCAATAGCCGCTGGAATTG+AGG - chr8_3:12257609-12257628 Msa1277120:intron 50.0%
!! TAGAGAGGGTACTGAGGGAT+GGG + chr8_3:12257869-12257888 None:intergenic 50.0%
!! ATAGAGAGGGTACTGAGGGA+TGG + chr8_3:12257870-12257889 None:intergenic 50.0%
!! GCTGAATAGAGAGGGTACTG+AGG + chr8_3:12257875-12257894 None:intergenic 50.0%
TCAGCCTCAATTACCCTCCA+TGG - chr8_3:12257890-12257909 Msa1277120:intron 50.0%
GTTGGAAGATGCCAAGTCCA+AGG - chr8_3:12258454-12258473 Msa1277120:intron 50.0%
AACACTGATGCCCTTGGACT+TGG + chr8_3:12258468-12258487 None:intergenic 50.0%
!! AGTCCAAGGGCATCAGTGTT+AGG - chr8_3:12258468-12258487 Msa1277120:intron 50.0%
!! GTCCAAGGGCATCAGTGTTA+GGG - chr8_3:12258469-12258488 Msa1277120:intron 50.0%
ATAAACCCCGGCAATCCAAC+AGG - chr8_3:12258503-12258522 Msa1277120:intron 50.0%
TAAACCCCGGCAATCCAACA+GGG - chr8_3:12258504-12258523 Msa1277120:intron 50.0%
!! CAAGAAGGTATCTCGGTCCA+TGG - chr8_3:12259096-12259115 Msa1277120:intron 50.0%
GTATCTCGGTCCATGGGATA+CGG - chr8_3:12259103-12259122 Msa1277120:intron 50.0%
ATCATTGTCGCCGTATCCCA+TGG + chr8_3:12259116-12259135 None:intergenic 50.0%
GTCCGTCTCCAAAGGTAAGT+CGG - chr8_3:12259156-12259175 Msa1277120:intron 50.0%
GGAGGTTATATGGAGGTGAC+TGG - chr8_3:12259301-12259320 Msa1277120:intron 50.0%
! TGGGTTTTCCCCAGATGTGA+GGG - chr8_3:12259321-12259340 Msa1277120:intron 50.0%
GGCAAAGGGTTAACCTTAGG+AGG + chr8_3:12259424-12259443 None:intergenic 50.0%
CTCCAACCTGCAAAGATCCA+TGG + chr8_3:12259607-12259626 None:intergenic 50.0%
AACCTTTGCACGCGTAGCAA+GGG + chr8_3:12259678-12259697 None:intergenic 50.0%
TAACCTTTGCACGCGTAGCA+AGG + chr8_3:12259679-12259698 None:intergenic 50.0%
! TGCTCCTTCTGCTTTGTTGC+AGG + chr8_3:12259871-12259890 None:intergenic 50.0%
!! GCAATAGAAGGCATCAGGTG+CGG + chr8_3:12259958-12259977 None:intergenic 50.0%
!!! TCCTGGTTCTGGTTTTGGAC+AGG - chr8_3:12260013-12260032 Msa1277120:intron 50.0%
ACCTGTCCAAAACCAGAACC+AGG + chr8_3:12260017-12260036 None:intergenic 50.0%
! TTCCCGGCACATGGCATTTT+AGG - chr8_3:12260467-12260486 Msa1277120:intron 50.0%
CACCTAAAATGCCATGTGCC+GGG + chr8_3:12260472-12260491 None:intergenic 50.0%
GCACCTAAAATGCCATGTGC+CGG + chr8_3:12260473-12260492 None:intergenic 50.0%
GCCGGAATCCTATCTTCTTG+AGG + chr8_3:12260505-12260524 None:intergenic 50.0%
ACCCACCACACCACACAATG+CGG - chr8_3:12254151-12254170 Msa1277120:three_prime_UTR 55.0%
TCCGCATTGTGTGGTGTGGT+GGG + chr8_3:12254155-12254174 None:intergenic 55.0%
TTCCGCATTGTGTGGTGTGG+TGG + chr8_3:12254156-12254175 None:intergenic 55.0%
! CAGCGGATTTCCGCATTGTG+TGG + chr8_3:12254164-12254183 None:intergenic 55.0%
GTGCCTGAATCTGTCTGCAG+CGG + chr8_3:12254181-12254200 None:intergenic 55.0%
AAGAACGGAGGGGAGAAGGA+TGG + chr8_3:12254254-12254273 None:intergenic 55.0%
GACAAAGAACGGAGGGGAGA+AGG + chr8_3:12254258-12254277 None:intergenic 55.0%
AAATTGCGGCCCTGGCAGAA+TGG - chr8_3:12255633-12255652 Msa1277120:intron 55.0%
! AGGTCGCAGCCTCACACTTT+TGG + chr8_3:12256149-12256168 None:intergenic 55.0%
CAGATCCCTGGAAGAGCAAC+TGG - chr8_3:12257454-12257473 Msa1277120:CDS 55.0%
AGGCACCAGTTGCTCTTCCA+GGG + chr8_3:12257462-12257481 None:intergenic 55.0%
TAGGCACCAGTTGCTCTTCC+AGG + chr8_3:12257463-12257482 None:intergenic 55.0%
ATCGCGCTCCTCAATTCCAG+CGG + chr8_3:12257620-12257639 None:intergenic 55.0%
GCCTCAATTACCCTCCATGG+TGG - chr8_3:12257893-12257912 Msa1277120:intron 55.0%
GCCACCATGGAGGGTAATTG+AGG + chr8_3:12257897-12257916 None:intergenic 55.0%
ACTTTACCAGCTGGCCACCA+TGG + chr8_3:12257910-12257929 None:intergenic 55.0%
AGCCCTAACACTGATGCCCT+TGG + chr8_3:12258474-12258493 None:intergenic 55.0%
TCAGGCTATCATGGGGAGTG+TGG - chr8_3:12259271-12259290 Msa1277120:intron 55.0%
! CTGGGTTTTCCCCAGATGTG+AGG - chr8_3:12259320-12259339 Msa1277120:intron 55.0%
TTCCCTTGCTACGCGTGCAA+AGG - chr8_3:12259673-12259692 Msa1277120:intron 55.0%
!! TTTTCAGGCAGGCGAATCCG+AGG + chr8_3:12259906-12259925 None:intergenic 55.0%
TCGGATTCGCCTGCCTGAAA+AGG - chr8_3:12259905-12259924 Msa1277120:intron 55.0%
CTTTCAAGGTTCCCGGCACA+TGG - chr8_3:12260458-12260477 Msa1277120:intron 55.0%
CTCTGTCAAGCGGGTGACAA+TGG + chr8_3:12260527-12260546 None:intergenic 55.0%
! GCCCTGGCAGAATGGTGTCA+TGG - chr8_3:12255641-12255660 Msa1277120:intron 60.0%
AGTGTGAGGCTGCGACCTCT+AGG - chr8_3:12256151-12256170 Msa1277120:intron 60.0%
! GGCTGCTGGCCTAGAGATTG+AGG + chr8_3:12256712-12256731 None:intergenic 60.0%
GCTACGGCTCTCTAGCACAG+TGG - chr8_3:12257175-12257194 Msa1277120:intron 60.0%
! GCTGGAATTGAGGAGCGCGA+TGG - chr8_3:12257619-12257638 Msa1277120:intron 60.0%
TACCAGCTGGCCACCATGGA+GGG + chr8_3:12257906-12257925 None:intergenic 60.0%
TTACCAGCTGGCCACCATGG+AGG + chr8_3:12257907-12257926 None:intergenic 60.0%
TGAAGCAACTGGTTGGGGGC+TGG - chr8_3:12258409-12258428 Msa1277120:intron 60.0%
ACCTGCCCTGTTGGATTGCC+GGG + chr8_3:12258512-12258531 None:intergenic 60.0%
CACCTGCCCTGTTGGATTGC+CGG + chr8_3:12258513-12258532 None:intergenic 60.0%
TTGCAGCTCACCTGCCCTGT+TGG + chr8_3:12258521-12258540 None:intergenic 60.0%
! CATGGGGAGTGTGGAAAGCG+AGG - chr8_3:12259280-12259299 Msa1277120:intron 60.0%
GTCAAGCGGGTGACAATGGC+CGG + chr8_3:12260523-12260542 None:intergenic 60.0%
TACCCTCCATGGTGGCCAGC+TGG - chr8_3:12257901-12257920 Msa1277120:intron 65.0%
CCTGCCCTGTTGGATTGCCG+GGG + chr8_3:12258511-12258530 None:intergenic 65.0%
! GGGGAGTGTGGAAAGCGAGG+AGG - chr8_3:12259283-12259302 Msa1277120:intron 65.0%
CCCCGGCAATCCAACAGGGC+AGG - chr8_3:12258508-12258527 Msa1277120:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 12254033 12260874 12254033 ID=Msa1277120;Name=Msa1277120
chr8_3 mRNA 12254033 12260874 12254033 ID=Msa1277120-mRNA-1;Parent=Msa1277120;Name=Msa1277120-mRNA-1;_AED=0.09;_eAED=0.09;_QI=135|0.92|1|1|1|1|14|292|507
chr8_3 exon 12254033 12254441 12254033 ID=Msa1277120-mRNA-1:exon:4914;Parent=Msa1277120-mRNA-1
chr8_3 exon 12254873 12255076 12254873 ID=Msa1277120-mRNA-1:exon:4913;Parent=Msa1277120-mRNA-1
chr8_3 exon 12255213 12255287 12255213 ID=Msa1277120-mRNA-1:exon:4912;Parent=Msa1277120-mRNA-1
chr8_3 exon 12255478 12255632 12255478 ID=Msa1277120-mRNA-1:exon:4911;Parent=Msa1277120-mRNA-1
chr8_3 exon 12255738 12255858 12255738 ID=Msa1277120-mRNA-1:exon:4910;Parent=Msa1277120-mRNA-1
chr8_3 exon 12256194 12256268 12256194 ID=Msa1277120-mRNA-1:exon:4909;Parent=Msa1277120-mRNA-1
chr8_3 exon 12256378 12256515 12256378 ID=Msa1277120-mRNA-1:exon:4908;Parent=Msa1277120-mRNA-1
chr8_3 exon 12256985 12257095 12256985 ID=Msa1277120-mRNA-1:exon:4907;Parent=Msa1277120-mRNA-1
chr8_3 exon 12257214 12257318 12257214 ID=Msa1277120-mRNA-1:exon:4906;Parent=Msa1277120-mRNA-1
chr8_3 exon 12257412 12257490 12257412 ID=Msa1277120-mRNA-1:exon:4905;Parent=Msa1277120-mRNA-1
chr8_3 exon 12258011 12258072 12258011 ID=Msa1277120-mRNA-1:exon:4904;Parent=Msa1277120-mRNA-1
chr8_3 exon 12258157 12258222 12258157 ID=Msa1277120-mRNA-1:exon:4903;Parent=Msa1277120-mRNA-1
chr8_3 exon 12258929 12258979 12258929 ID=Msa1277120-mRNA-1:exon:4902;Parent=Msa1277120-mRNA-1
chr8_3 exon 12260575 12260874 12260575 ID=Msa1277120-mRNA-1:exon:4901;Parent=Msa1277120-mRNA-1
chr8_3 five_prime_UTR 12260740 12260874 12260740 ID=Msa1277120-mRNA-1:five_prime_utr;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12260575 12260739 12260575 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12258929 12258979 12258929 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12258157 12258222 12258157 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12258011 12258072 12258011 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12257412 12257490 12257412 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12257214 12257318 12257214 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12256985 12257095 12256985 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12256378 12256515 12256378 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12256194 12256268 12256194 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12255738 12255858 12255738 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12255478 12255632 12255478 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12255213 12255287 12255213 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12254873 12255076 12254873 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 CDS 12254325 12254441 12254325 ID=Msa1277120-mRNA-1:cds;Parent=Msa1277120-mRNA-1
chr8_3 three_prime_UTR 12254033 12254324 12254033 ID=Msa1277120-mRNA-1:three_prime_utr;Parent=Msa1277120-mRNA-1
Gene Sequence

>Msa1277120

ATGCGGAAATCCGCTGCAGACAGATTCAGGCACCTTTTCAACCGTTCACTTGTTTTTGTTCGGAATCAAAATCAACAATATCGCCATCCTTCTCCCCTCCGTTCTTTGTCTTCAATGGCTTCTGATTCACCTTTCCCTGTTACCGCTCAAAATATTAACCCTCAGAACTTGCAAAAAGCTTTGCAAGCCAATCCAGATGCTCATTCGTTTGATGAGATAATTTACTGCAACATTGGAAATCCTCAATCTCTAGGCCAGCAGCCAATTACTTTTTTCCGAGAGGTTCTTGCTTTATGTGACTATCCTGCTCTTTTGGACAAAAGTGAAACACAGGGTTTGTTCAGTGCTGATTCAATAGAGAGAGCTTGGCAAATTGTGGATCAGATCCCTGGAAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTATTCAGGGTTTACGTGATGCAATAGCCGCTGGAATTGAGGAGCGCGATGGTTTTCCTTGTAATGCCAATGACATTTTCTTGACAGATGGTGCAAGCCCAGCAGTCCATATGATGATGCAATTACTCATTAGATCAGAAAAGGATGGTATTTTGTGTCCCATCCCTCAGTACCCTCTCTATTCAGCCTCAATTACCCTCCATGGTGGCCAGCTGGTACCATATTATCTTGATGAAGCAACTGGTTGGGGGCTGGAAATATCTGAACTCAAGAAGCAGTTGGAAGATGCCAAGTCCAAGGGCATCAGTGTTAGGGCTTTAGCTGTTATAAACCCCGGCAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAACGGGCTATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTTTATCAAGAAAACGTTTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATACGGCGACAATGATATTTGCTTAGTATCTTTTCAGTCCGTCTCCAAAGGCTATCATGGGGAGTGTGGAAAGCGAGGAGGTTATATGGAGGTGACTGGGTTTTCCCCAGATGTGAGGGAACAAATTTATAAAGTGGCATCTGTGAATCTTTGTTCTAACATCACTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCTCCTAAGGTTGGAGACGAGTCTTATGAGTCATTCATGGCTGAGAAGGGTGCTATTTTATCTTCCCTTGCTACGCGTGCAAAGACACTTGAAGAAGCTTTAAACAAATTAGAGGGCGTAACCTGCAACAAAGCAGAAGGAGCAATGTATCTGTTTCCTCGGATTCGCCTGCCTGAAAAGGCTATCAAAGCTGCAGAGGCTGAAAAGTCCGCACCTGATGCCTTCTATTGCAAACGCTTACTTAATGCCACTGGAATTGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCCGGCACATGGCATTTTAGGTGCACCATATTACCTCAAGAAGATAGGATTCCGGCCATTGTCACCCGCTTGACAGAGTTCCATCAAAAGTTCATGGATGAGTTTCGTGATTGA
Protein sequence

>Msa1277120

MRKSAADRFRHLFNRSLVFVRNQNQQYRHPSPLRSLSSMASDSPFPVTAQNINPQNLQKALQANPDAHSFDEIIYCNIGNPQSLGQQPITFFREVLALCDYPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRDAIAAGIEERDGFPCNANDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASITLHGGQLVPYYLDEATGWGLEISELKKQLEDAKSKGISVRALAVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGDNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQILASLIMSPPKVGDESYESFMAEKGAILSSLATRAKTLEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHQKFMDEFRD*