Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176060 | XP_003627492.2 | 95.573 | 497 | 14 | 2 | 1 | 494 | 1 | 492 | 0.0 | 978 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176060 | sp|Q8GYY5|RGAP3_ARATH | 53.082 | 503 | 171 | 12 | 1 | 494 | 1 | 447 | 2.12e-160 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074680 | Msa1176060 | 0.806050 | 9.929092e-50 | -8.615850e-47 |
| Msa1112380 | Msa1176060 | 0.800790 | 1.221379e-48 | -8.615850e-47 |
| Msa1176060 | Msa1236240 | 0.937613 | 2.604612e-98 | -8.615850e-47 |
| Msa1176060 | Msa1276660 | 0.813071 | 3.081677e-51 | -8.615850e-47 |
| Msa1176060 | Msa1277490 | 0.916853 | 1.080314e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176060 | MtrunA17_Chr8g0346171 | 95.573 | 497 | 14 | 2 | 1 | 494 | 1 | 492 | 0.0 | 978 |
| Msa1176060 | MtrunA17_Chr7g0266501 | 70.769 | 260 | 75 | 1 | 84 | 342 | 69 | 328 | 8.61e-138 | 405 |
| Msa1176060 | MtrunA17_Chr1g0196181 | 65.203 | 296 | 96 | 2 | 73 | 361 | 23 | 318 | 7.13e-136 | 401 |
| Msa1176060 | MtrunA17_Chr2g0321541 | 68.889 | 270 | 81 | 2 | 81 | 347 | 42 | 311 | 4.02e-131 | 387 |
| Msa1176060 | MtrunA17_Chr4g0026251 | 61.565 | 294 | 98 | 3 | 81 | 373 | 65 | 344 | 3.75e-128 | 377 |
| Msa1176060 | MtrunA17_Chr7g0268531 | 70.270 | 259 | 71 | 2 | 89 | 341 | 32 | 290 | 2.26e-122 | 365 |
| Msa1176060 | MtrunA17_Chr7g0250591 | 65.217 | 161 | 54 | 1 | 150 | 310 | 14 | 172 | 5.51e-72 | 228 |
| Msa1176060 | MtrunA17_Chr5g0426461 | 64.331 | 157 | 52 | 1 | 150 | 306 | 16 | 168 | 9.79e-67 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176060 | AT2G46710.1 | 53.082 | 503 | 171 | 12 | 1 | 494 | 1 | 447 | 2.15e-161 | 465 |
| Msa1176060 | AT5G22400.1 | 71.154 | 260 | 75 | 0 | 83 | 342 | 87 | 346 | 3.26e-137 | 404 |
| Msa1176060 | AT3G11490.1 | 65.636 | 291 | 94 | 1 | 87 | 371 | 67 | 357 | 1.49e-135 | 399 |
| Msa1176060 | AT4G03100.1 | 68.401 | 269 | 73 | 2 | 84 | 340 | 39 | 307 | 2.35e-133 | 393 |
| Msa1176060 | AT1G08340.1 | 70.130 | 231 | 69 | 0 | 111 | 341 | 1 | 231 | 3.92e-121 | 358 |
Find 113 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAAACCAGTTTGCAATAT+TGG | 0.157516 | 8_1:-7786888 | Msa1176060:CDS |
| TTCATCTTTCTTCTTGTTGA+TGG | 0.175582 | 8_1:+7787048 | None:intergenic |
| TTGTTTATCCGGCTTGATTA+AGG | 0.253081 | 8_1:-7785482 | Msa1176060:intron |
| AAAGGACCACTTTCGTATCT+TGG | 0.283881 | 8_1:+7783956 | None:intergenic |
| TGATGCAGTGTGAAGGTATT+TGG | 0.306995 | 8_1:-7785812 | Msa1176060:intron |
| TTTACAATGGCAAGACTTGC+AGG | 0.317689 | 8_1:+7783815 | None:intergenic |
| TAGAGAGAAAATGAAGAGTT+TGG | 0.320950 | 8_1:+7787337 | None:intergenic |
| ATGAAAATGTGATATGGTTT+TGG | 0.329026 | 8_1:+7787268 | None:intergenic |
| GATCTCGAACGAATGCTTCT+TGG | 0.347459 | 8_1:+7785545 | None:intergenic |
| ACTTGAATGAAAATGTGATA+TGG | 0.353168 | 8_1:+7787262 | None:intergenic |
| CGCACAATGTTAACAATTGT+AGG | 0.355043 | 8_1:-7783663 | Msa1176060:three_prime_UTR |
| GTGTTCCAACAATTCTTCTA+AGG | 0.355399 | 8_1:-7785742 | Msa1176060:CDS |
| ATCGATGTTCATTGTTTATC+CGG | 0.358798 | 8_1:-7785493 | Msa1176060:CDS |
| TGCATCCTTAGAAGAATTGT+TGG | 0.370772 | 8_1:+7785737 | None:intergenic |
| TTGATGGTTACTTGTGCAAC+AGG | 0.375336 | 8_1:+7787064 | None:intergenic |
| AGACTTGCAGGCTTCTTAGA+TGG | 0.380145 | 8_1:+7783827 | None:intergenic |
| GGGAAATTATGAAAGACAAT+TGG | 0.381230 | 8_1:+7787366 | None:intergenic |
| GAGGGAAGATGTTTCTTCCT+TGG | 0.381917 | 8_1:-7786816 | Msa1176060:CDS |
| TGACTGGGCAATCAATTTGA+TGG | 0.385583 | 8_1:-7784808 | Msa1176060:CDS |
| CAGAAGCTGCTCTTCTTGAC+TGG | 0.401025 | 8_1:-7784824 | Msa1176060:CDS |
| TGCATGAATCAATGCAGTTA+AGG | 0.415964 | 8_1:+7784306 | None:intergenic |
| GCATGAATCAATGCAGTTAA+GGG | 0.418194 | 8_1:+7784307 | None:intergenic |
| AGGAGGAAATTCATCATTGC+AGG | 0.421427 | 8_1:+7784177 | None:intergenic |
| ATTATGAAAGACAATTGGAT+TGG | 0.424236 | 8_1:+7787371 | None:intergenic |
| TTTCTTCCTTGGATATTAGC+TGG | 0.437424 | 8_1:-7786805 | Msa1176060:CDS |
| GGCTTGCTCAATTGAAATAC+CGG | 0.440128 | 8_1:+7783848 | None:intergenic |
| CTATATCCAATATTGCAAAC+TGG | 0.444268 | 8_1:+7786882 | None:intergenic |
| ACTACAACTGCAACCGCATC+AGG | 0.458627 | 8_1:-7783704 | Msa1176060:three_prime_UTR |
| TCCTCTTTGTTGAAGTTGAA+AGG | 0.462988 | 8_1:+7784157 | None:intergenic |
| TGGTTTAGAGAGCTTCCAAC+TGG | 0.465706 | 8_1:-7784933 | Msa1176060:CDS |
| CTGGCACTAGGTACCCTTGT+AGG | 0.471703 | 8_1:+7786695 | None:intergenic |
| CAGTGTTCTTATGATGATAG+AGG | 0.479488 | 8_1:-7785770 | Msa1176060:CDS |
| TTCGAGATCAGTTAAACAAA+GGG | 0.480003 | 8_1:-7785531 | Msa1176060:CDS |
| TTATGAAAGACAATTGGATT+GGG | 0.480560 | 8_1:+7787372 | None:intergenic |
| TTTAAGTTGTAACAGCTACT+TGG | 0.481948 | 8_1:-7783531 | Msa1176060:three_prime_UTR |
| GGAAGGAAGAGGAGAAGCTT+GGG | 0.485623 | 8_1:-7783786 | Msa1176060:CDS |
| AATGAAGAGTTTGGTTGAGA+GGG | 0.486933 | 8_1:+7787346 | None:intergenic |
| GGGAAGGAAGAGGAGAAGCT+TGG | 0.491896 | 8_1:-7783787 | Msa1176060:CDS |
| GTTTCAAGACAATTCACAAA+AGG | 0.492894 | 8_1:-7786926 | Msa1176060:CDS |
| GTCAAGAAGAGCAGCTTCTG+TGG | 0.495179 | 8_1:+7784827 | None:intergenic |
| ACGGCGTGCGCAAGTTATGC+AGG | 0.495303 | 8_1:-7783874 | Msa1176060:CDS |
| GCCTTCTGAGTTTCAGCCTG+AGG | 0.495415 | 8_1:-7786720 | Msa1176060:CDS |
| TTCTCAAGGACTTCCACCTT+AGG | 0.495514 | 8_1:-7784073 | Msa1176060:CDS |
| GAATGCGCGCAACGTAGCTA+TGG | 0.499082 | 8_1:-7784751 | Msa1176060:CDS |
| GTCTTGCCATTGTAAATACT+AGG | 0.506258 | 8_1:-7783808 | Msa1176060:CDS |
| TCAAAATCATGCAACATAGC+TGG | 0.506873 | 8_1:-7787109 | Msa1176060:CDS |
| ACTCCATTCTATTCTTCCTA+AGG | 0.508306 | 8_1:+7784057 | None:intergenic |
| AAATGAAGAGTTTGGTTGAG+AGG | 0.509274 | 8_1:+7787345 | None:intergenic |
| TCCTTTCAACTTCAACAAAG+AGG | 0.511319 | 8_1:-7784158 | Msa1176060:CDS |
| GGTACCCTTGTAGGAACCTC+AGG | 0.515998 | 8_1:+7786704 | None:intergenic |
| TAACAAACCTGTGTCATGTT+GGG | 0.519362 | 8_1:+7784720 | None:intergenic |
| CGTAAATACCTTAATCAAGC+CGG | 0.519512 | 8_1:+7785474 | None:intergenic |
| GTTCGAGATCAGTTAAACAA+AGG | 0.524433 | 8_1:-7785532 | Msa1176060:CDS |
| TGAACAACAAGAACAAGAAG+AGG | 0.528324 | 8_1:-7787029 | Msa1176060:CDS |
| TTGCATTGCATCACTTGCTC+CGG | 0.531461 | 8_1:+7784891 | None:intergenic |
| GCAACCGCATCAGGTATAGT+TGG | 0.532086 | 8_1:-7783695 | Msa1176060:three_prime_UTR |
| AGAAGAGCAGCTTCTGTGGA+AGG | 0.535601 | 8_1:+7784831 | None:intergenic |
| CAAAAGCAATTGTATTCTGA+AGG | 0.538997 | 8_1:-7785716 | Msa1176060:CDS |
| TGTAACTTGCAGTGTGGAGA+GGG | 0.539058 | 8_1:-7786834 | Msa1176060:CDS |
| CCATTCTATTCTTCCTAAGG+TGG | 0.539125 | 8_1:+7784060 | None:intergenic |
| CTACAAGGGTACCTAGTGCC+AGG | 0.543064 | 8_1:-7786694 | Msa1176060:intron |
| CCACCTTAGGAAGAATAGAA+TGG | 0.543887 | 8_1:-7784060 | Msa1176060:CDS |
| TTCAGCCTGAGGTTCCTACA+AGG | 0.552164 | 8_1:-7786709 | Msa1176060:CDS |
| TGAAAGACAATTGGATTGGG+TGG | 0.553722 | 8_1:+7787375 | None:intergenic |
| GCCATTGTAAATACTAGGGA+AGG | 0.559174 | 8_1:-7783803 | Msa1176060:CDS |
| GCGCAAGTTATGCAGGCACC+CGG | 0.570203 | 8_1:-7783867 | Msa1176060:CDS |
| GAAGATATGACAGCGAACAT+TGG | 0.571920 | 8_1:-7783910 | Msa1176060:CDS |
| AATGGAGTGTAGAGAAACTT+CGG | 0.573336 | 8_1:-7784042 | Msa1176060:CDS |
| GTCACCATGTGAACAAATTG+AGG | 0.575603 | 8_1:-7784134 | Msa1176060:CDS |
| TCTTGCCATTGTAAATACTA+GGG | 0.575822 | 8_1:-7783807 | Msa1176060:CDS |
| AGGTGAGGTAAAACACAAAG+AGG | 0.576387 | 8_1:+7787222 | None:intergenic |
| AGAAGCTGCTCTTCTTGACT+GGG | 0.576970 | 8_1:-7784823 | Msa1176060:CDS |
| GCATCCTCAATTTGTTCACA+TGG | 0.578905 | 8_1:+7784130 | None:intergenic |
| CATTGGTCACGATTGAGAAA+CGG | 0.582047 | 8_1:-7783893 | Msa1176060:CDS |
| ACCTCAGGCTGAAACTCAGA+AGG | 0.584588 | 8_1:+7786719 | None:intergenic |
| GTAAATACTAGGGAAGGAAG+AGG | 0.593283 | 8_1:-7783797 | Msa1176060:CDS |
| ATGTTTGAAAATGTTAACAA+AGG | 0.594976 | 8_1:-7783476 | Msa1176060:three_prime_UTR |
| GACACGTGTCTCACTTCGGT+TGG | 0.596127 | 8_1:+7786782 | None:intergenic |
| AGAGAATCAAGTACACCAGT+TGG | 0.600276 | 8_1:+7784918 | None:intergenic |
| CTACCAAAAGAAAATTCTCA+AGG | 0.605610 | 8_1:-7784087 | Msa1176060:CDS |
| TTGTAACTTGCAGTGTGGAG+AGG | 0.609827 | 8_1:-7786835 | Msa1176060:CDS |
| TCTTTGTTGAAGTTGAAAGG+AGG | 0.610113 | 8_1:+7784160 | None:intergenic |
| AGTTGGAAGCTCTCTAAACC+AGG | 0.611737 | 8_1:+7784935 | None:intergenic |
| TGGTCTTAAATAAAGCTGAA+AGG | 0.615351 | 8_1:+7787185 | None:intergenic |
| TTTCGCGCCCAACATGACAC+AGG | 0.615447 | 8_1:-7784727 | Msa1176060:intron |
| TCCTTCCCTAGTATTTACAA+TGG | 0.616815 | 8_1:+7783802 | None:intergenic |
| GGCTATTCTCAGCAGTAATG+CGG | 0.618302 | 8_1:+7785566 | None:intergenic |
| GTCACACAAGCCATAAAACA+AGG | 0.618321 | 8_1:+7783611 | None:intergenic |
| TGCGGTTGCAGTTGTAGTTG+CGG | 0.622958 | 8_1:+7783709 | None:intergenic |
| AGTGTTCTTATGATGATAGA+GGG | 0.624124 | 8_1:-7785769 | Msa1176060:CDS |
| ATGTGACACGTGTCTCACTT+CGG | 0.625234 | 8_1:+7786778 | None:intergenic |
| AGGTAAAACACAAAGAGGGT+TGG | 0.626972 | 8_1:+7787227 | None:intergenic |
| ACATCCAACTATACCTGATG+CGG | 0.629151 | 8_1:+7783691 | None:intergenic |
| CATGAATCAATGCAGTTAAG+GGG | 0.629505 | 8_1:+7784308 | None:intergenic |
| AAGATTGCTCTCACATAGCA+TGG | 0.632661 | 8_1:-7784209 | Msa1176060:CDS |
| GGTTGGCCAGCTAATATCCA+AGG | 0.633161 | 8_1:+7786799 | None:intergenic |
| TCAGCCTGAGGTTCCTACAA+GGG | 0.635145 | 8_1:-7786708 | Msa1176060:CDS |
| CTTTAAATGATGCAGTGTGA+AGG | 0.637209 | 8_1:-7785819 | Msa1176060:intron |
| AGGAAATTCATCATTGCAGG+AGG | 0.637863 | 8_1:+7784180 | None:intergenic |
| TTTCCATGGATGAAGGCAGA+AGG | 0.638432 | 8_1:-7785595 | Msa1176060:intron |
| AACAAAGGGATAGTGCCACA+TGG | 0.638676 | 8_1:-7785517 | Msa1176060:CDS |
| TGATGGTTACTTGTGCAACA+GGG | 0.639773 | 8_1:+7787065 | None:intergenic |
| AAGCAATTGTATTCTGAAGG+AGG | 0.641065 | 8_1:-7785713 | Msa1176060:CDS |
| GCTTGCTCAATTGAAATACC+GGG | 0.650080 | 8_1:+7783849 | None:intergenic |
| GGTGAGGTAAAACACAAAGA+GGG | 0.651496 | 8_1:+7787223 | None:intergenic |
| TGGAAGGAAGTAACTTGACA+AGG | 0.651985 | 8_1:+7784847 | None:intergenic |
| AAACAAGGCATGCATAAACA+AGG | 0.653736 | 8_1:+7783626 | None:intergenic |
| TTAACAAACCTGTGTCATGT+TGG | 0.658298 | 8_1:+7784719 | None:intergenic |
| ATCTATTGTAACTTGCAGTG+TGG | 0.662855 | 8_1:-7786840 | Msa1176060:CDS |
| GTAACTCCAAGATACGAAAG+TGG | 0.671137 | 8_1:-7783962 | Msa1176060:CDS |
| TGTACTTGATTCTCTCACAC+CGG | 0.686660 | 8_1:-7784910 | Msa1176060:CDS |
| AGAGAAACTTCGGAGCTCCG+AGG | 0.715154 | 8_1:-7784032 | Msa1176060:CDS |
| CAATGAACATCGATTCCATG+TGG | 0.724200 | 8_1:+7785502 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTGTACTTATAATAAAA+TGG | - | chr8_1:7784581-7784600 | Msa1176060:intron | 10.0% |
| !! | AACAAGAAAAAAAAAATGAA+GGG | + | chr8_1:7783657-7783676 | None:intergenic | 15.0% |
| !! | TAACAAGAAAAAAAAAATGA+AGG | + | chr8_1:7783658-7783677 | None:intergenic | 15.0% |
| !! | ATAGATATAAAAAATTTACC+TGG | + | chr8_1:7784142-7784161 | None:intergenic | 15.0% |
| !! | AACATGAAATTTATGTAATT+TGG | - | chr8_1:7784173-7784192 | Msa1176060:CDS | 15.0% |
| !!! | TCAATTTTGTTTAGAATTTT+TGG | - | chr8_1:7784291-7784310 | Msa1176060:CDS | 15.0% |
| !!! | TTTTTATCATTATCTATTTC+AGG | - | chr8_1:7785857-7785876 | Msa1176060:intron | 15.0% |
| !!! | TAACTATAACTATTTTCTAA+AGG | + | chr8_1:7786880-7786899 | None:intergenic | 15.0% |
| !! | CATACTTTATCTAATTTCAA+GGG | + | chr8_1:7784458-7784477 | None:intergenic | 20.0% |
| !! | TCATACTTTATCTAATTTCA+AGG | + | chr8_1:7784459-7784478 | None:intergenic | 20.0% |
| !!! | AAAGCCTAAAATTTTCTTAA+GGG | + | chr8_1:7784488-7784507 | None:intergenic | 20.0% |
| !!! | AAAAGCCTAAAATTTTCTTA+AGG | + | chr8_1:7784489-7784508 | None:intergenic | 20.0% |
| !! | AAGTACAATAAAAGATTCAT+AGG | + | chr8_1:7784572-7784591 | None:intergenic | 20.0% |
| !! | CTTATAATAAAATGGTAGAA+TGG | - | chr8_1:7784589-7784608 | Msa1176060:intron | 20.0% |
| !! | AAAATACAGATAATCAATCA+AGG | + | chr8_1:7784937-7784956 | None:intergenic | 20.0% |
| !! | AAATTACAGAACATACTTTA+AGG | + | chr8_1:7785128-7785147 | None:intergenic | 20.0% |
| !!! | ATAGTTACATGTGAATTTTA+AGG | - | chr8_1:7785184-7785203 | Msa1176060:intron | 20.0% |
| !!! | TTCAGTCAAATGAATTTTAT+AGG | + | chr8_1:7785371-7785390 | None:intergenic | 20.0% |
| !! | AAACACTAAGTTTGATTAAT+AGG | - | chr8_1:7785578-7785597 | Msa1176060:CDS | 20.0% |
| !! | GGTTGAAAAATAAAAAGATA+CGG | + | chr8_1:7785694-7785713 | None:intergenic | 20.0% |
| !!! | TATCTTTTTATTTTTCAACC+TGG | - | chr8_1:7785694-7785713 | Msa1176060:intron | 20.0% |
| !! | AATGATAAAAAGATATGACA+AGG | + | chr8_1:7785848-7785867 | None:intergenic | 20.0% |
| !! | CATCTAAATTTCATATTTCA+TGG | - | chr8_1:7786246-7786265 | Msa1176060:intron | 20.0% |
| !! | ATGTTTGAAAATGTTAACAA+AGG | - | chr8_1:7787339-7787358 | Msa1176060:five_prime_UTR | 20.0% |
| ! | TTATGAAAGACAATTGGATT+GGG | + | chr8_1:7783446-7783465 | None:intergenic | 25.0% |
| ! | ATTATGAAAGACAATTGGAT+TGG | + | chr8_1:7783447-7783466 | None:intergenic | 25.0% |
| !!! | ATATGGTTTTGGTTAAGTAA+AGG | + | chr8_1:7783539-7783558 | None:intergenic | 25.0% |
| !! | ATGAAAATGTGATATGGTTT+TGG | + | chr8_1:7783550-7783569 | None:intergenic | 25.0% |
| ! | ACTTGAATGAAAATGTGATA+TGG | + | chr8_1:7783556-7783575 | None:intergenic | 25.0% |
| !! | GAAAGGATCTGAATATTTTA+AGG | + | chr8_1:7783616-7783635 | None:intergenic | 25.0% |
| ! | AGAAAAAAAAAATGAAGGGT+TGG | + | chr8_1:7783653-7783672 | None:intergenic | 25.0% |
| !!! | GTTACTTTTGATAGATTCAA+TGG | - | chr8_1:7784060-7784079 | Msa1176060:CDS | 25.0% |
| !! | ATTCCCCTTAAGAAAATTTT+AGG | - | chr8_1:7784481-7784500 | Msa1176060:intron | 25.0% |
| !! | AAGCCTAAAATTTTCTTAAG+GGG | + | chr8_1:7784487-7784506 | None:intergenic | 25.0% |
| !!! | AATGCTTTATTTCTTCTTGT+AGG | - | chr8_1:7784533-7784552 | Msa1176060:intron | 25.0% |
| ! | TAAATCCTGACTATTATGTA+TGG | - | chr8_1:7784742-7784761 | Msa1176060:CDS | 25.0% |
| ! | TCGTATTTGTCAAATTCATT+TGG | - | chr8_1:7785154-7785173 | Msa1176060:intron | 25.0% |
| !! | TGCGTAACTTGTAAATTATT+TGG | - | chr8_1:7785426-7785445 | Msa1176060:intron | 25.0% |
| ! | CTCATAATTTACTGATAAGT+GGG | - | chr8_1:7785495-7785514 | Msa1176060:CDS | 25.0% |
| ! | ACTAAGTTTGATTAATAGGA+AGG | - | chr8_1:7785582-7785601 | Msa1176060:CDS | 25.0% |
| !!! | GTTGATTATTTTTCTCAAAC+TGG | - | chr8_1:7785808-7785827 | Msa1176060:intron | 25.0% |
| !! | TTTAAAACCAGAAATGTTTC+TGG | - | chr8_1:7786165-7786184 | Msa1176060:intron | 25.0% |
| ! | TGCAAACTCAGATAATAAAT+TGG | + | chr8_1:7786228-7786247 | None:intergenic | 25.0% |
| ! | GCTAATTGTACAAAATATCA+GGG | + | chr8_1:7786312-7786331 | None:intergenic | 25.0% |
| ! | TGCTAATTGTACAAAATATC+AGG | + | chr8_1:7786313-7786332 | None:intergenic | 25.0% |
| !! | GATATTTTGTACAATTAGCA+TGG | - | chr8_1:7786313-7786332 | Msa1176060:intron | 25.0% |
| ! | TAATAAGCTGAAAAATTCGA+TGG | - | chr8_1:7786351-7786370 | Msa1176060:intron | 25.0% |
| !! | CGTATTTTTCATTTCACTTT+TGG | + | chr8_1:7786446-7786465 | None:intergenic | 25.0% |
| !! | CTTGAAAATGCATTTTTACA+AGG | - | chr8_1:7787052-7787071 | Msa1176060:CDS | 25.0% |
| !!! | TGCATAAACAAGGTTTTAAT+CGG | + | chr8_1:7787182-7787201 | None:intergenic | 25.0% |
| GGGAAATTATGAAAGACAAT+TGG | + | chr8_1:7783452-7783471 | None:intergenic | 30.0% | |
| TAGAGAGAAAATGAAGAGTT+TGG | + | chr8_1:7783481-7783500 | None:intergenic | 30.0% | |
| !! | TTTTGGTTAAGTAAAGGTTG+TGG | + | chr8_1:7783533-7783552 | None:intergenic | 30.0% |
| !!! | GATCTGAATATTTTAAGGTG+AGG | + | chr8_1:7783611-7783630 | None:intergenic | 30.0% |
| ! | TGGTCTTAAATAAAGCTGAA+AGG | + | chr8_1:7783633-7783652 | None:intergenic | 30.0% |
| !! | TGCATGATTTTGATCGAAAA+AGG | + | chr8_1:7783699-7783718 | None:intergenic | 30.0% |
| TTCATCTTTCTTCTTGTTGA+TGG | + | chr8_1:7783770-7783789 | None:intergenic | 30.0% | |
| GTTTCAAGACAATTCACAAA+AGG | - | chr8_1:7783889-7783908 | Msa1176060:CDS | 30.0% | |
| TCAAAACCAGTTTGCAATAT+TGG | - | chr8_1:7783927-7783946 | Msa1176060:CDS | 30.0% | |
| CTATATCCAATATTGCAAAC+TGG | + | chr8_1:7783936-7783955 | None:intergenic | 30.0% | |
| ! | GATAGATTCAATGGTTTTCT+TGG | - | chr8_1:7784069-7784088 | Msa1176060:CDS | 30.0% |
| TAAAAAATTTACCTGGCACT+AGG | + | chr8_1:7784135-7784154 | None:intergenic | 30.0% | |
| TTAGTATTTGTTTGTGTCTC+TGG | - | chr8_1:7784353-7784372 | Msa1176060:intron | 30.0% | |
| AAGCTGATGTAGATATTAAC+AGG | - | chr8_1:7784614-7784633 | Msa1176060:intron | 30.0% | |
| ! | GTTTTCCATACATAATAGTC+AGG | + | chr8_1:7784750-7784769 | None:intergenic | 30.0% |
| GTATGGAAAACACTGTTAAA+CGG | - | chr8_1:7784759-7784778 | Msa1176060:CDS | 30.0% | |
| ! | AAACTAGTTTGTCAGATTTG+TGG | - | chr8_1:7784894-7784913 | Msa1176060:CDS | 30.0% |
| AGTGTTCTTATGATGATAGA+GGG | - | chr8_1:7785046-7785065 | Msa1176060:intron | 30.0% | |
| CAAAAGCAATTGTATTCTGA+AGG | - | chr8_1:7785099-7785118 | Msa1176060:intron | 30.0% | |
| TTCGAGATCAGTTAAACAAA+GGG | - | chr8_1:7785284-7785303 | Msa1176060:intron | 30.0% | |
| ATCGATGTTCATTGTTTATC+CGG | - | chr8_1:7785322-7785341 | Msa1176060:intron | 30.0% | |
| TTAACATTTCCAAAGCCTTT+CGG | - | chr8_1:7785398-7785417 | Msa1176060:intron | 30.0% | |
| ! | CCAACGCATACAAAATTTTA+AGG | + | chr8_1:7785469-7785488 | None:intergenic | 30.0% |
| ! | CCTTAAAATTTTGTATGCGT+TGG | - | chr8_1:7785466-7785485 | Msa1176060:intron | 30.0% |
| GCTCATAATTTACTGATAAG+TGG | - | chr8_1:7785494-7785513 | Msa1176060:CDS | 30.0% | |
| ! | CTGTTCATTTTCAACAACAT+CGG | + | chr8_1:7786033-7786052 | None:intergenic | 30.0% |
| TAATCAACCAGAAACATTTC+TGG | + | chr8_1:7786175-7786194 | None:intergenic | 30.0% | |
| CTACCAAAAGAAAATTCTCA+AGG | - | chr8_1:7786728-7786747 | Msa1176060:CDS | 30.0% | |
| ! | AGTCCTTGAGAATTTTCTTT+TGG | + | chr8_1:7786734-7786753 | None:intergenic | 30.0% |
| !!! | TTCAGATCTTTTTCAAGTGA+TGG | - | chr8_1:7786829-7786848 | Msa1176060:CDS | 30.0% |
| TCTTGCCATTGTAAATACTA+GGG | - | chr8_1:7787008-7787027 | Msa1176060:CDS | 30.0% | |
| !!! | TTTATGCATGCCTTGTTTTA+TGG | - | chr8_1:7787194-7787213 | Msa1176060:five_prime_UTR | 30.0% |
| !! | TTTAAGTTGTAACAGCTACT+TGG | - | chr8_1:7787284-7787303 | Msa1176060:five_prime_UTR | 30.0% |
| AATGAAGAGTTTGGTTGAGA+GGG | + | chr8_1:7783472-7783491 | None:intergenic | 35.0% | |
| AAATGAAGAGTTTGGTTGAG+AGG | + | chr8_1:7783473-7783492 | None:intergenic | 35.0% | |
| TTGTGGTGAAAAATGGAAGA+AGG | + | chr8_1:7783516-7783535 | None:intergenic | 35.0% | |
| GTAAAGGTTGTGGTGAAAAA+TGG | + | chr8_1:7783523-7783542 | None:intergenic | 35.0% | |
| TCAAAATCATGCAACATAGC+TGG | - | chr8_1:7783706-7783725 | Msa1176060:three_prime_UTR | 35.0% | |
| TGAACAACAAGAACAAGAAG+AGG | - | chr8_1:7783786-7783805 | Msa1176060:CDS | 35.0% | |
| ! | TGATGATGATGATGATGATG+AGG | - | chr8_1:7783840-7783859 | Msa1176060:CDS | 35.0% |
| !!! | CTGGTTTTGATGATTGTTGT+TGG | + | chr8_1:7783917-7783936 | None:intergenic | 35.0% |
| ! | ATCTATTGTAACTTGCAGTG+TGG | - | chr8_1:7783975-7783994 | Msa1176060:CDS | 35.0% |
| TTTCTTCCTTGGATATTAGC+TGG | - | chr8_1:7784010-7784029 | Msa1176060:CDS | 35.0% | |
| !! | CCTTGCATTGTATTTTGAGT+TGG | + | chr8_1:7784837-7784856 | None:intergenic | 35.0% |
| CCAACTCAAAATACAATGCA+AGG | - | chr8_1:7784834-7784853 | Msa1176060:CDS | 35.0% | |
| CACACTGCATCATTTAAAGA+CGG | + | chr8_1:7784995-7785014 | None:intergenic | 35.0% | |
| CTTTAAATGATGCAGTGTGA+AGG | - | chr8_1:7784996-7785015 | Msa1176060:intron | 35.0% | |
| CAGTGTTCTTATGATGATAG+AGG | - | chr8_1:7785045-7785064 | Msa1176060:intron | 35.0% | |
| GTGTTCCAACAATTCTTCTA+AGG | - | chr8_1:7785073-7785092 | Msa1176060:intron | 35.0% | |
| TGCATCCTTAGAAGAATTGT+TGG | + | chr8_1:7785081-7785100 | None:intergenic | 35.0% | |
| ! | AAGCAATTGTATTCTGAAGG+AGG | - | chr8_1:7785102-7785121 | Msa1176060:intron | 35.0% |
| GTCTAATTTCATGCTTTCCA+TGG | - | chr8_1:7785206-7785225 | Msa1176060:intron | 35.0% | |
| GTTCGAGATCAGTTAAACAA+AGG | - | chr8_1:7785283-7785302 | Msa1176060:intron | 35.0% | |
| ! | TTGTTTATCCGGCTTGATTA+AGG | - | chr8_1:7785333-7785352 | Msa1176060:intron | 35.0% |
| CGTAAATACCTTAATCAAGC+CGG | + | chr8_1:7785344-7785363 | None:intergenic | 35.0% | |
| AAGTTACGCAAATAACCGAA+AGG | + | chr8_1:7785416-7785435 | None:intergenic | 35.0% | |
| !!! | AATTTTGTATGCGTTGGCTA+TGG | - | chr8_1:7785472-7785491 | Msa1176060:intron | 35.0% |
| TATCTATTAGAACAGCAACC+AGG | + | chr8_1:7785715-7785734 | None:intergenic | 35.0% | |
| ATCATTATCTATTTCAGGCC+TGG | - | chr8_1:7785862-7785881 | Msa1176060:intron | 35.0% | |
| TAACAAACCTGTGTCATGTT+GGG | + | chr8_1:7786098-7786117 | None:intergenic | 35.0% | |
| TTAACAAACCTGTGTCATGT+TGG | + | chr8_1:7786099-7786118 | None:intergenic | 35.0% | |
| GTACAATTAGCATGGCATAT+CGG | - | chr8_1:7786321-7786340 | Msa1176060:intron | 35.0% | |
| ACTTTCTTGTGAAATCCAGA+TGG | - | chr8_1:7786480-7786499 | Msa1176060:intron | 35.0% | |
| CATGAATCAATGCAGTTAAG+GGG | + | chr8_1:7786510-7786529 | None:intergenic | 35.0% | |
| GCATGAATCAATGCAGTTAA+GGG | + | chr8_1:7786511-7786530 | None:intergenic | 35.0% | |
| TGCATGAATCAATGCAGTTA+AGG | + | chr8_1:7786512-7786531 | None:intergenic | 35.0% | |
| TCTTTGTTGAAGTTGAAAGG+AGG | + | chr8_1:7786658-7786677 | None:intergenic | 35.0% | |
| TCCTTTCAACTTCAACAAAG+AGG | - | chr8_1:7786657-7786676 | Msa1176060:intron | 35.0% | |
| TCCTCTTTGTTGAAGTTGAA+AGG | + | chr8_1:7786661-7786680 | None:intergenic | 35.0% | |
| ACTCCATTCTATTCTTCCTA+AGG | + | chr8_1:7786761-7786780 | None:intergenic | 35.0% | |
| AATGGAGTGTAGAGAAACTT+CGG | - | chr8_1:7786773-7786792 | Msa1176060:CDS | 35.0% | |
| GTCTTGCCATTGTAAATACT+AGG | - | chr8_1:7787007-7787026 | Msa1176060:CDS | 35.0% | |
| TCCTTCCCTAGTATTTACAA+TGG | + | chr8_1:7787016-7787035 | None:intergenic | 35.0% | |
| CGCACAATGTTAACAATTGT+AGG | - | chr8_1:7787152-7787171 | Msa1176060:five_prime_UTR | 35.0% | |
| AAACAAGGCATGCATAAACA+AGG | + | chr8_1:7787192-7787211 | None:intergenic | 35.0% | |
| ! | TGAAAGACAATTGGATTGGG+TGG | + | chr8_1:7783443-7783462 | None:intergenic | 40.0% |
| TGGTGAAAAATGGAAGAAGG+AGG | + | chr8_1:7783513-7783532 | None:intergenic | 40.0% | |
| AGGTAAAACACAAAGAGGGT+TGG | + | chr8_1:7783591-7783610 | None:intergenic | 40.0% | |
| GGTGAGGTAAAACACAAAGA+GGG | + | chr8_1:7783595-7783614 | None:intergenic | 40.0% | |
| AGGTGAGGTAAAACACAAAG+AGG | + | chr8_1:7783596-7783615 | None:intergenic | 40.0% | |
| TGATGGTTACTTGTGCAACA+GGG | + | chr8_1:7783753-7783772 | None:intergenic | 40.0% | |
| ! | TTGATGGTTACTTGTGCAAC+AGG | + | chr8_1:7783754-7783773 | None:intergenic | 40.0% |
| GTCTCTGGTATAGAAGATTC+TGG | - | chr8_1:7784368-7784387 | Msa1176060:intron | 40.0% | |
| TTTCGACATGTTAATCTGCG+TGG | - | chr8_1:7784681-7784700 | Msa1176060:intron | 40.0% | |
| ACATGTTAATCTGCGTGGTA+AGG | - | chr8_1:7784686-7784705 | Msa1176060:intron | 40.0% | |
| !! | TGATGCAGTGTGAAGGTATT+TGG | - | chr8_1:7785003-7785022 | Msa1176060:intron | 40.0% |
| TTCATGCTTTCCATGGATGA+AGG | - | chr8_1:7785213-7785232 | Msa1176060:intron | 40.0% | |
| !! | CAATGAACATCGATTCCATG+TGG | + | chr8_1:7785316-7785335 | None:intergenic | 40.0% |
| AGATGTTTGATCACGGACTT+CGG | + | chr8_1:7785649-7785668 | None:intergenic | 40.0% | |
| AGAGAATCAAGTACACCAGT+TGG | + | chr8_1:7785900-7785919 | None:intergenic | 40.0% | |
| TGTACTTGATTCTCTCACAC+CGG | - | chr8_1:7785905-7785924 | Msa1176060:intron | 40.0% | |
| TGGAAGGAAGTAACTTGACA+AGG | + | chr8_1:7785971-7785990 | None:intergenic | 40.0% | |
| TGACTGGGCAATCAATTTGA+TGG | - | chr8_1:7786007-7786026 | Msa1176060:intron | 40.0% | |
| GTAAATGAGCGAAACGAGAT+TGG | + | chr8_1:7786206-7786225 | None:intergenic | 40.0% | |
| AAGATTGCTCTCACATAGCA+TGG | - | chr8_1:7786606-7786625 | Msa1176060:intron | 40.0% | |
| AGGAAATTCATCATTGCAGG+AGG | + | chr8_1:7786638-7786657 | None:intergenic | 40.0% | |
| AGGAGGAAATTCATCATTGC+AGG | + | chr8_1:7786641-7786660 | None:intergenic | 40.0% | |
| GTCACCATGTGAACAAATTG+AGG | - | chr8_1:7786681-7786700 | Msa1176060:intron | 40.0% | |
| ! | GCATCCTCAATTTGTTCACA+TGG | + | chr8_1:7786688-7786707 | None:intergenic | 40.0% |
| CCATTCTATTCTTCCTAAGG+TGG | + | chr8_1:7786758-7786777 | None:intergenic | 40.0% | |
| CCACCTTAGGAAGAATAGAA+TGG | - | chr8_1:7786755-7786774 | Msa1176060:CDS | 40.0% | |
| !!! | GTCTCGATTCCTTTTTTCCT+CGG | + | chr8_1:7786803-7786822 | None:intergenic | 40.0% |
| GTAACTCCAAGATACGAAAG+TGG | - | chr8_1:7786853-7786872 | Msa1176060:CDS | 40.0% | |
| AAAGGACCACTTTCGTATCT+TGG | + | chr8_1:7786862-7786881 | None:intergenic | 40.0% | |
| GAAGATATGACAGCGAACAT+TGG | - | chr8_1:7786905-7786924 | Msa1176060:CDS | 40.0% | |
| CATTGGTCACGATTGAGAAA+CGG | - | chr8_1:7786922-7786941 | Msa1176060:CDS | 40.0% | |
| GCTTGCTCAATTGAAATACC+GGG | + | chr8_1:7786969-7786988 | None:intergenic | 40.0% | |
| ! | GGCTTGCTCAATTGAAATAC+CGG | + | chr8_1:7786970-7786989 | None:intergenic | 40.0% |
| TTTACAATGGCAAGACTTGC+AGG | + | chr8_1:7787003-7787022 | None:intergenic | 40.0% | |
| GCCATTGTAAATACTAGGGA+AGG | - | chr8_1:7787012-7787031 | Msa1176060:CDS | 40.0% | |
| GTAAATACTAGGGAAGGAAG+AGG | - | chr8_1:7787018-7787037 | Msa1176060:CDS | 40.0% | |
| ACATCCAACTATACCTGATG+CGG | + | chr8_1:7787127-7787146 | None:intergenic | 40.0% | |
| GTCACACAAGCCATAAAACA+AGG | + | chr8_1:7787207-7787226 | None:intergenic | 40.0% | |
| ! | TTGTAACTTGCAGTGTGGAG+AGG | - | chr8_1:7783980-7783999 | Msa1176060:CDS | 45.0% |
| ! | TGTAACTTGCAGTGTGGAGA+GGG | - | chr8_1:7783981-7784000 | Msa1176060:CDS | 45.0% |
| GAGGGAAGATGTTTCTTCCT+TGG | - | chr8_1:7783999-7784018 | Msa1176060:CDS | 45.0% | |
| ATGTGACACGTGTCTCACTT+CGG | + | chr8_1:7784040-7784059 | None:intergenic | 45.0% | |
| AATCTGCGTGGTAAGGAACT+CGG | - | chr8_1:7784693-7784712 | Msa1176060:intron | 45.0% | |
| ! | AACCTCTCACCACTAGCTTA+AGG | + | chr8_1:7784722-7784741 | None:intergenic | 45.0% |
| TTTCCATGGATGAAGGCAGA+AGG | - | chr8_1:7785220-7785239 | Msa1176060:intron | 45.0% | |
| ATTCCTTCTGCCTTCATCCA+TGG | + | chr8_1:7785226-7785245 | None:intergenic | 45.0% | |
| GGCTATTCTCAGCAGTAATG+CGG | + | chr8_1:7785252-7785271 | None:intergenic | 45.0% | |
| GATCTCGAACGAATGCTTCT+TGG | + | chr8_1:7785273-7785292 | None:intergenic | 45.0% | |
| AACAAAGGGATAGTGCCACA+TGG | - | chr8_1:7785298-7785317 | Msa1176060:intron | 45.0% | |
| CGCAAATAACCGAAAGGCTT+TGG | + | chr8_1:7785410-7785429 | None:intergenic | 45.0% | |
| GCTGGAGACCTATGCATAAA+TGG | - | chr8_1:7785623-7785642 | Msa1176060:intron | 45.0% | |
| GACTTCGGCCATTTATGCAT+AGG | + | chr8_1:7785634-7785653 | None:intergenic | 45.0% | |
| GAGCACGAGATGTTTGATCA+CGG | + | chr8_1:7785656-7785675 | None:intergenic | 45.0% | |
| AGTTGGAAGCTCTCTAAACC+AGG | + | chr8_1:7785883-7785902 | None:intergenic | 45.0% | |
| TGGTTTAGAGAGCTTCCAAC+TGG | - | chr8_1:7785882-7785901 | Msa1176060:intron | 45.0% | |
| TTGCATTGCATCACTTGCTC+CGG | + | chr8_1:7785927-7785946 | None:intergenic | 45.0% | |
| AGAAGCTGCTCTTCTTGACT+GGG | - | chr8_1:7785992-7786011 | Msa1176060:intron | 45.0% | |
| TTCTCAAGGACTTCCACCTT+AGG | - | chr8_1:7786742-7786761 | Msa1176060:CDS | 45.0% | |
| GGAAAAAAGGAATCGAGACG+AGG | - | chr8_1:7786804-7786823 | Msa1176060:CDS | 45.0% | |
| AGACTTGCAGGCTTCTTAGA+TGG | + | chr8_1:7786991-7787010 | None:intergenic | 45.0% | |
| ! | GGTTGGCCAGCTAATATCCA+AGG | + | chr8_1:7784019-7784038 | None:intergenic | 50.0% |
| ACCTCAGGCTGAAACTCAGA+AGG | + | chr8_1:7784099-7784118 | None:intergenic | 50.0% | |
| TTCAGCCTGAGGTTCCTACA+AGG | - | chr8_1:7784106-7784125 | Msa1176060:CDS | 50.0% | |
| TCAGCCTGAGGTTCCTACAA+GGG | - | chr8_1:7784107-7784126 | Msa1176060:CDS | 50.0% | |
| ACTCGGACACCTTAAGCTAG+TGG | - | chr8_1:7784710-7784729 | Msa1176060:intron | 50.0% | |
| CACCTTAAGCTAGTGGTGAG+AGG | - | chr8_1:7784717-7784736 | Msa1176060:intron | 50.0% | |
| AAGTGGGCAGTTTGTCTGAG+CGG | - | chr8_1:7785511-7785530 | Msa1176060:CDS | 50.0% | |
| TACTGCATCCACTCTACAGC+TGG | - | chr8_1:7785605-7785624 | Msa1176060:intron | 50.0% | |
| ATAGGTCTCCAGCTGTAGAG+TGG | + | chr8_1:7785616-7785635 | None:intergenic | 50.0% | |
| AGAAGAGCAGCTTCTGTGGA+AGG | + | chr8_1:7785987-7786006 | None:intergenic | 50.0% | |
| GTCAAGAAGAGCAGCTTCTG+TGG | + | chr8_1:7785991-7786010 | None:intergenic | 50.0% | |
| CAGAAGCTGCTCTTCTTGAC+TGG | - | chr8_1:7785991-7786010 | Msa1176060:intron | 50.0% | |
| TTCGGAGCTCCGAGGAAAAA+AGG | - | chr8_1:7786791-7786810 | Msa1176060:CDS | 50.0% | |
| GGAAGGAAGAGGAGAAGCTT+GGG | - | chr8_1:7787029-7787048 | Msa1176060:CDS | 50.0% | |
| TGCGGTTGCAGTTGTAGTTG+CGG | + | chr8_1:7787109-7787128 | None:intergenic | 50.0% | |
| ACTACAACTGCAACCGCATC+AGG | - | chr8_1:7787111-7787130 | Msa1176060:CDS | 50.0% | |
| GCAACCGCATCAGGTATAGT+TGG | - | chr8_1:7787120-7787139 | Msa1176060:CDS | 50.0% | |
| GACACGTGTCTCACTTCGGT+TGG | + | chr8_1:7784036-7784055 | None:intergenic | 55.0% | |
| GCCTTCTGAGTTTCAGCCTG+AGG | - | chr8_1:7784095-7784114 | Msa1176060:CDS | 55.0% | |
| GGTACCCTTGTAGGAACCTC+AGG | + | chr8_1:7784114-7784133 | None:intergenic | 55.0% | |
| CTGGCACTAGGTACCCTTGT+AGG | + | chr8_1:7784123-7784142 | None:intergenic | 55.0% | |
| !! | CTACAAGGGTACCTAGTGCC+AGG | - | chr8_1:7784121-7784140 | Msa1176060:CDS | 55.0% |
| GGAGTTCAGACGCTGCTAAG+CGG | - | chr8_1:7784780-7784799 | Msa1176060:CDS | 55.0% | |
| AGTGGGCAGTTTGTCTGAGC+GGG | - | chr8_1:7785512-7785531 | Msa1176060:CDS | 55.0% | |
| GAATGCGCGCAACGTAGCTA+TGG | - | chr8_1:7786064-7786083 | Msa1176060:intron | 55.0% | |
| TTTCGCGCCCAACATGACAC+AGG | - | chr8_1:7786088-7786107 | Msa1176060:intron | 55.0% | |
| CAGTTAAGGGGTCTGCCATC+TGG | + | chr8_1:7786498-7786517 | None:intergenic | 55.0% | |
| AGAGAAACTTCGGAGCTCCG+AGG | - | chr8_1:7786783-7786802 | Msa1176060:CDS | 55.0% | |
| GGGAAGGAAGAGGAGAAGCT+TGG | - | chr8_1:7787028-7787047 | Msa1176060:CDS | 55.0% | |
| GTGGGCAGTTTGTCTGAGCG+GGG | - | chr8_1:7785513-7785532 | Msa1176060:CDS | 60.0% | |
| GCAGTTTGTCTGAGCGGGGA+AGG | - | chr8_1:7785517-7785536 | Msa1176060:CDS | 60.0% | |
| TGAGCGGGGAAGGTTGCTCA+AGG | - | chr8_1:7785527-7785546 | Msa1176060:CDS | 60.0% | |
| GAGCGGGGAAGGTTGCTCAA+GGG | - | chr8_1:7785528-7785547 | Msa1176060:CDS | 60.0% | |
| ACGGCGTGCGCAAGTTATGC+AGG | - | chr8_1:7786941-7786960 | Msa1176060:CDS | 60.0% | |
| GCGCAAGTTATGCAGGCACC+CGG | - | chr8_1:7786948-7786967 | Msa1176060:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 7783436 | 7787401 | 7783436 | ID=Msa1176060;Name=Msa1176060 |
| chr8_1 | mRNA | 7783436 | 7787401 | 7783436 | ID=Msa1176060-mRNA-1;Parent=Msa1176060;Name=Msa1176060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=252|1|1|1|1|1|5|345|494 |
| chr8_1 | exon | 7783436 | 7784338 | 7783436 | ID=Msa1176060-mRNA-1:exon:2783;Parent=Msa1176060-mRNA-1 |
| chr8_1 | exon | 7784728 | 7784958 | 7784728 | ID=Msa1176060-mRNA-1:exon:2782;Parent=Msa1176060-mRNA-1 |
| chr8_1 | exon | 7785483 | 7785602 | 7785483 | ID=Msa1176060-mRNA-1:exon:2781;Parent=Msa1176060-mRNA-1 |
| chr8_1 | exon | 7785706 | 7785826 | 7785706 | ID=Msa1176060-mRNA-1:exon:2780;Parent=Msa1176060-mRNA-1 |
| chr8_1 | exon | 7786695 | 7787401 | 7786695 | ID=Msa1176060-mRNA-1:exon:2779;Parent=Msa1176060-mRNA-1 |
| chr8_1 | five_prime_UTR | 7787150 | 7787401 | 7787150 | ID=Msa1176060-mRNA-1:five_prime_utr;Parent=Msa1176060-mRNA-1 |
| chr8_1 | CDS | 7786695 | 7787149 | 7786695 | ID=Msa1176060-mRNA-1:cds;Parent=Msa1176060-mRNA-1 |
| chr8_1 | CDS | 7785706 | 7785826 | 7785706 | ID=Msa1176060-mRNA-1:cds;Parent=Msa1176060-mRNA-1 |
| chr8_1 | CDS | 7785483 | 7785602 | 7785483 | ID=Msa1176060-mRNA-1:cds;Parent=Msa1176060-mRNA-1 |
| chr8_1 | CDS | 7784728 | 7784958 | 7784728 | ID=Msa1176060-mRNA-1:cds;Parent=Msa1176060-mRNA-1 |
| chr8_1 | CDS | 7783781 | 7784338 | 7783781 | ID=Msa1176060-mRNA-1:cds;Parent=Msa1176060-mRNA-1 |
| chr8_1 | three_prime_UTR | 7783436 | 7783780 | 7783436 | ID=Msa1176060-mRNA-1:three_prime_utr;Parent=Msa1176060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
