Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184360 | XP_024627646.1 | 65.944 | 323 | 59 | 3 | 1 | 319 | 1 | 276 | 2.41e-133 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184360 | sp|Q9FPT1|UBP12_ARATH | 29.333 | 150 | 95 | 4 | 26 | 175 | 51 | 189 | 6.06e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1184360 | Msa1228080 | 0.927904 | 6.125139e-92 | -8.615850e-47 |
| Msa1184360 | Msa1271320 | 0.885394 | 8.442683e-72 | -8.615850e-47 |
| Msa1184360 | Msa1308240 | 0.878371 | 2.964165e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184360 | MtrunA17_Chr8g0334821 | 65.944 | 323 | 59 | 3 | 1 | 319 | 1 | 276 | 2.21e-137 | 398 |
| Msa1184360 | MtrunA17_Chr4g0069161 | 50.331 | 151 | 74 | 1 | 19 | 169 | 7 | 156 | 2.32e-44 | 154 |
| Msa1184360 | MtrunA17_Chr5g0439971 | 33.333 | 153 | 90 | 5 | 26 | 178 | 56 | 196 | 6.67e-18 | 84.7 |
| Msa1184360 | MtrunA17_Chr1g0170261 | 30.000 | 150 | 93 | 4 | 26 | 175 | 54 | 191 | 2.53e-17 | 82.8 |
| Msa1184360 | MtrunA17_Chr3g0119031 | 30.201 | 149 | 93 | 4 | 26 | 174 | 51 | 188 | 9.54e-16 | 78.2 |
| Msa1184360 | MtrunA17_Chr5g0443161 | 35.897 | 117 | 68 | 3 | 49 | 165 | 48 | 157 | 6.70e-15 | 73.2 |
| Msa1184360 | MtrunA17_Chr5g0443194 | 33.607 | 122 | 70 | 3 | 36 | 153 | 17 | 131 | 2.72e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184360 | AT3G17380.1 | 46.622 | 148 | 75 | 2 | 20 | 167 | 10 | 153 | 4.87e-36 | 132 |
| Msa1184360 | AT5G26290.1 | 42.384 | 151 | 83 | 3 | 19 | 169 | 42 | 188 | 6.74e-34 | 127 |
| Msa1184360 | AT5G26280.1 | 40.244 | 164 | 94 | 3 | 6 | 169 | 36 | 195 | 7.88e-34 | 127 |
| Msa1184360 | AT5G26260.1 | 42.949 | 156 | 84 | 4 | 13 | 168 | 45 | 195 | 1.13e-33 | 127 |
| Msa1184360 | AT5G26280.3 | 40.244 | 164 | 94 | 3 | 6 | 169 | 55 | 214 | 1.55e-33 | 127 |
| Msa1184360 | AT5G26300.1 | 41.104 | 163 | 91 | 4 | 7 | 169 | 37 | 194 | 8.08e-33 | 124 |
| Msa1184360 | AT2G04170.4 | 45.775 | 142 | 73 | 3 | 25 | 166 | 3 | 140 | 3.67e-32 | 121 |
| Msa1184360 | AT2G04170.3 | 45.775 | 142 | 73 | 3 | 25 | 166 | 3 | 140 | 3.67e-32 | 121 |
| Msa1184360 | AT2G04170.6 | 45.775 | 142 | 73 | 3 | 25 | 166 | 85 | 222 | 1.83e-31 | 121 |
| Msa1184360 | AT2G04170.2 | 45.775 | 142 | 73 | 3 | 25 | 166 | 125 | 262 | 3.16e-31 | 121 |
| Msa1184360 | AT2G04170.1 | 45.775 | 142 | 73 | 3 | 25 | 166 | 125 | 262 | 3.16e-31 | 121 |
| Msa1184360 | AT2G04170.5 | 45.775 | 142 | 73 | 3 | 25 | 166 | 125 | 262 | 4.40e-31 | 120 |
| Msa1184360 | AT2G04170.7 | 45.775 | 142 | 73 | 3 | 25 | 166 | 125 | 262 | 9.53e-31 | 118 |
| Msa1184360 | AT5G26320.1 | 34.545 | 165 | 102 | 4 | 6 | 168 | 36 | 196 | 5.30e-26 | 106 |
| Msa1184360 | AT3G20360.1 | 35.976 | 164 | 99 | 3 | 8 | 167 | 42 | 203 | 3.85e-25 | 103 |
| Msa1184360 | AT3G20370.1 | 40.141 | 142 | 80 | 4 | 25 | 165 | 81 | 218 | 2.12e-24 | 102 |
| Msa1184360 | AT3G20370.2 | 40.141 | 142 | 80 | 4 | 25 | 165 | 59 | 196 | 2.45e-24 | 101 |
| Msa1184360 | AT2G15710.1 | 37.037 | 162 | 92 | 5 | 25 | 182 | 94 | 249 | 2.52e-23 | 99.0 |
| Msa1184360 | AT2G04190.1 | 36.076 | 158 | 96 | 4 | 11 | 167 | 101 | 254 | 4.56e-23 | 99.0 |
| Msa1184360 | AT4G09770.4 | 35.333 | 150 | 90 | 4 | 20 | 169 | 26 | 168 | 4.62e-23 | 97.8 |
| Msa1184360 | AT4G09770.5 | 35.333 | 150 | 90 | 4 | 20 | 169 | 26 | 168 | 5.19e-23 | 96.7 |
| Msa1184360 | AT5G26280.2 | 34.146 | 164 | 81 | 4 | 6 | 169 | 36 | 172 | 7.30e-23 | 97.4 |
| Msa1184360 | AT4G09770.2 | 35.374 | 147 | 88 | 4 | 23 | 169 | 3 | 142 | 8.07e-23 | 96.7 |
| Msa1184360 | AT4G09770.1 | 35.374 | 147 | 88 | 4 | 23 | 169 | 3 | 142 | 8.07e-23 | 96.7 |
| Msa1184360 | AT4G09770.3 | 35.374 | 147 | 88 | 4 | 23 | 169 | 3 | 142 | 8.77e-23 | 95.5 |
| Msa1184360 | AT3G22080.1 | 34.810 | 158 | 95 | 4 | 22 | 174 | 12 | 166 | 9.03e-23 | 96.7 |
| Msa1184360 | AT3G28220.1 | 33.548 | 155 | 99 | 3 | 25 | 177 | 76 | 228 | 1.57e-21 | 94.0 |
| Msa1184360 | AT4G09780.2 | 35.333 | 150 | 91 | 4 | 20 | 169 | 53 | 196 | 2.43e-20 | 91.3 |
| Msa1184360 | AT4G09780.1 | 35.333 | 150 | 91 | 4 | 20 | 169 | 53 | 196 | 2.68e-20 | 91.3 |
| Msa1184360 | AT1G65050.2 | 32.593 | 135 | 81 | 3 | 19 | 153 | 9 | 133 | 8.66e-18 | 79.7 |
| Msa1184360 | AT1G65050.1 | 32.593 | 135 | 81 | 3 | 19 | 153 | 9 | 133 | 8.66e-18 | 79.7 |
| Msa1184360 | AT3G20380.1 | 32.414 | 145 | 95 | 2 | 26 | 170 | 83 | 224 | 2.07e-17 | 82.4 |
| Msa1184360 | AT3G22085.1 | 32.026 | 153 | 81 | 4 | 23 | 174 | 12 | 142 | 1.12e-16 | 79.3 |
| Msa1184360 | AT1G58270.1 | 26.257 | 179 | 120 | 4 | 9 | 177 | 67 | 243 | 3.03e-15 | 76.3 |
| Msa1184360 | AT5G06600.1 | 29.333 | 150 | 95 | 4 | 26 | 175 | 51 | 189 | 6.16e-15 | 76.3 |
| Msa1184360 | AT5G06600.2 | 29.333 | 150 | 95 | 4 | 26 | 175 | 50 | 188 | 6.33e-15 | 76.3 |
| Msa1184360 | AT5G06600.3 | 29.333 | 150 | 95 | 4 | 26 | 175 | 51 | 189 | 6.66e-15 | 75.9 |
| Msa1184360 | AT1G65150.2 | 31.333 | 150 | 93 | 4 | 19 | 168 | 9 | 148 | 7.26e-15 | 74.3 |
| Msa1184360 | AT1G65150.1 | 31.333 | 150 | 93 | 4 | 19 | 168 | 9 | 148 | 7.26e-15 | 74.3 |
| Msa1184360 | AT3G11910.4 | 29.333 | 150 | 95 | 4 | 26 | 175 | 49 | 187 | 5.35e-14 | 73.2 |
| Msa1184360 | AT3G11910.2 | 29.333 | 150 | 95 | 4 | 26 | 175 | 49 | 187 | 5.35e-14 | 73.2 |
| Msa1184360 | AT3G11910.3 | 29.333 | 150 | 95 | 4 | 26 | 175 | 50 | 188 | 5.40e-14 | 73.2 |
| Msa1184360 | AT3G11910.1 | 29.333 | 150 | 95 | 4 | 26 | 175 | 50 | 188 | 5.40e-14 | 73.2 |
Find 87 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCGCCATTCTGGAAAT+TGG | 0.166182 | 8_1:-20003292 | Msa1184360:CDS |
| ATGTGTAAATAGGAATTTAC+TGG | 0.318596 | 8_1:-20002791 | Msa1184360:intron |
| CAACATATGGCTCCTTTACT+TGG | 0.321819 | 8_1:-20003064 | Msa1184360:CDS |
| ATCACCAACAGTGAAGGTTT+TGG | 0.327804 | 8_1:+20002995 | None:intergenic |
| AAGTGATCAAAACCCCATTC+AGG | 0.333445 | 8_1:+20003398 | None:intergenic |
| GCATTCACTGTTGTATTTGA+TGG | 0.334498 | 8_1:+20002685 | None:intergenic |
| CCACAGCCAAGGAAAATGAT+TGG | 0.349740 | 8_1:+20004083 | None:intergenic |
| AGGAATTTACTGGTTATTCC+TGG | 0.363144 | 8_1:-20002781 | Msa1184360:CDS |
| TGGTGGCAGCAAGCCTCCTA+TGG | 0.376131 | 8_1:-20003105 | Msa1184360:CDS |
| GAACTCTTTGATTCATGTAA+TGG | 0.386387 | 8_1:-20003362 | Msa1184360:CDS |
| GAAAATGGTGTTGTCTGATC+TGG | 0.389525 | 8_1:-20004476 | None:intergenic |
| GTGGAGGAGCCAGTTGTTAG+AGG | 0.389719 | 8_1:+20003203 | None:intergenic |
| GATGGCAAGCATCAGATATC+TGG | 0.400348 | 8_1:-20003173 | Msa1184360:CDS |
| TAATGAAATGAAACCTGAAT+GGG | 0.403034 | 8_1:-20003411 | Msa1184360:CDS |
| GATTCGCCATTCTGGAAATT+GGG | 0.428445 | 8_1:-20003291 | Msa1184360:CDS |
| GAAGAAGATAGATGTGTGTT+TGG | 0.428668 | 8_1:-20003329 | Msa1184360:CDS |
| CTTGCCATCGTCGGTGGTGG+AGG | 0.430846 | 8_1:+20003187 | None:intergenic |
| CAAGCCTCCTATGGGACCTT+CGG | 0.431498 | 8_1:-20003096 | Msa1184360:CDS |
| CGAGAACTTGAGGTTGGCTT+AGG | 0.433731 | 8_1:+20004451 | None:intergenic |
| AGGTTTGCCACCGCCGGTGG+AGG | 0.434260 | 8_1:+20003148 | None:intergenic |
| GACAAGCCTCCAACAACATC+TGG | 0.444539 | 8_1:-20003248 | Msa1184360:CDS |
| AGGCTTGCCGCTGTCGGTGG+AGG | 0.446318 | 8_1:+20003223 | None:intergenic |
| AACAATTATTTGACCATCCA+AGG | 0.454086 | 8_1:-20003603 | Msa1184360:intron |
| TGATCACTTAATTTCATTCG+AGG | 0.457349 | 8_1:-20003384 | Msa1184360:CDS |
| AGCGGCAAGCCTCTAACAAC+TGG | 0.462023 | 8_1:-20003212 | Msa1184360:CDS |
| CTGCCACCAGTGGAGGAGCC+CGG | 0.473945 | 8_1:+20003119 | None:intergenic |
| TCTGGCTCCTCCACCGGCGG+TGG | 0.479745 | 8_1:-20003155 | Msa1184360:CDS |
| GTGGAGGAGCCAGATGTTGT+TGG | 0.481372 | 8_1:+20003239 | None:intergenic |
| TATTATTTATTGCAGGAAGT+TGG | 0.485728 | 8_1:-20003766 | Msa1184360:intron |
| TTAATGAAATGAAACCTGAA+TGG | 0.492526 | 8_1:-20003412 | Msa1184360:CDS |
| AGAGAAACTTCCTCGTGGTT+GGG | 0.492926 | 8_1:-20003670 | Msa1184360:CDS |
| TTTCACAATCTGTTAGCTGC+AGG | 0.493802 | 8_1:+20002713 | None:intergenic |
| AAGAGAAACTTCCTCGTGGT+TGG | 0.497936 | 8_1:-20003671 | Msa1184360:CDS |
| TCTCTTTATCTGCAATTGCT+AGG | 0.498543 | 8_1:+20003688 | None:intergenic |
| TCGGTGGAGCCTCCAACATA+TGG | 0.499115 | 8_1:-20003077 | Msa1184360:CDS |
| CAAGTAAAGGAGCCATATGT+TGG | 0.508456 | 8_1:+20003065 | None:intergenic |
| GAGGAGCCAGATGTTGTTGG+AGG | 0.509126 | 8_1:+20003242 | None:intergenic |
| TAGAGGCTTGCCGCTGTCGG+TGG | 0.510126 | 8_1:+20003220 | None:intergenic |
| TCAAGTTCTCGCTGTGGTGT+TGG | 0.520881 | 8_1:-20004439 | Msa1184360:intron |
| ATCTTAAACAAATAATCAGC+TGG | 0.523582 | 8_1:+20004106 | None:intergenic |
| AAGTTGCCCAATTTCCAGAA+TGG | 0.525211 | 8_1:+20003285 | None:intergenic |
| ATGCTTGCCATCGTCGGTGG+TGG | 0.531952 | 8_1:+20003184 | None:intergenic |
| AGGCTTGCTGCCACCAGTGG+AGG | 0.534969 | 8_1:+20003112 | None:intergenic |
| TGCAGCTAACAGATTGTGAA+AGG | 0.535458 | 8_1:-20002711 | Msa1184360:CDS |
| GGTGGCAGCAAGCCTCCTAT+GGG | 0.537840 | 8_1:-20003104 | Msa1184360:CDS |
| TGTTAGAGGCTTGCCGCTGT+CGG | 0.539736 | 8_1:+20003217 | None:intergenic |
| GCCTCCTATGGGACCTTCGG+TGG | 0.540110 | 8_1:-20003093 | Msa1184360:CDS |
| ATGTTACGTTATACCTTGGA+TGG | 0.540323 | 8_1:+20003590 | None:intergenic |
| GGCTCCTCCACCACCGACGA+TGG | 0.540723 | 8_1:-20003191 | Msa1184360:CDS |
| CACATCTATCTTCTTCATCA+AGG | 0.545426 | 8_1:+20003336 | None:intergenic |
| CTGGAGGAAATTCTATAGAC+GGG | 0.546671 | 8_1:-20002762 | Msa1184360:CDS |
| GACTTCAGAACTTGTTAACA+TGG | 0.548759 | 8_1:-20003040 | Msa1184360:CDS |
| ATCTCCAAAACCTTCACTGT+TGG | 0.550291 | 8_1:-20002999 | Msa1184360:CDS |
| GTTCTGAAGTCTCCAAGTAA+AGG | 0.556006 | 8_1:+20003052 | None:intergenic |
| CCTGGAGGAAATTCTATAGA+CGG | 0.557036 | 8_1:-20002763 | Msa1184360:CDS |
| AGGAGGCTTGCTGCCACCAG+TGG | 0.557206 | 8_1:+20003109 | None:intergenic |
| TGTTGTTGGAGGCTTGTCGC+CGG | 0.558944 | 8_1:+20003253 | None:intergenic |
| CTCTCTATCACCAACAGTGA+AGG | 0.559204 | 8_1:+20002989 | None:intergenic |
| CCGTCTATAGAATTTCCTCC+AGG | 0.562853 | 8_1:+20002763 | None:intergenic |
| CCACAGCGAGAACTTGAGGT+TGG | 0.576715 | 8_1:+20004445 | None:intergenic |
| TTTAGGTTTGCCACCGCCGG+TGG | 0.580272 | 8_1:+20003145 | None:intergenic |
| TATCTGATGCTTGCCATCGT+CGG | 0.584579 | 8_1:+20003178 | None:intergenic |
| CAGATATCTGGCTCCTCCAC+CGG | 0.587634 | 8_1:-20003161 | Msa1184360:CDS |
| GTAAAGGAGCCATATGTTGG+AGG | 0.594906 | 8_1:+20003068 | None:intergenic |
| AACACCACAGCGAGAACTTG+AGG | 0.606081 | 8_1:+20004441 | None:intergenic |
| ATATCTGGCTCCTCCACCGG+CGG | 0.606504 | 8_1:-20003158 | Msa1184360:CDS |
| TATGTTGGAGGCTCCACCGA+AGG | 0.610908 | 8_1:+20003080 | None:intergenic |
| TTGATTACTGTAGATGCTGA+TGG | 0.611226 | 8_1:-20003449 | Msa1184360:intron |
| TCTGGCTCCTCCACCGACAG+CGG | 0.614331 | 8_1:-20003230 | Msa1184360:CDS |
| TCCACCGAAGGTCCCATAGG+AGG | 0.616939 | 8_1:+20003092 | None:intergenic |
| TTCAAGCTGGTGGATACACA+TGG | 0.621317 | 8_1:-20004027 | Msa1184360:intron |
| GGCTCCACCGAAGGTCCCAT+AGG | 0.622131 | 8_1:+20003089 | None:intergenic |
| AATCCGGGCTCCTCCACTGG+TGG | 0.622139 | 8_1:-20003122 | Msa1184360:CDS |
| CTGATGCTTGCCATCGTCGG+TGG | 0.623957 | 8_1:+20003181 | None:intergenic |
| AATTTACTGGTTATTCCTGG+AGG | 0.631353 | 8_1:-20002778 | Msa1184360:CDS |
| TTTGGAGATCACCACATCGG+AGG | 0.631551 | 8_1:+20003013 | None:intergenic |
| GAAACTTCCTCGTGGTTGGG+AGG | 0.634061 | 8_1:-20003667 | Msa1184360:CDS |
| TTAAACAAATAATCAGCTGG+TGG | 0.636707 | 8_1:+20004109 | None:intergenic |
| AATTCTATAGACGGGATCAG+TGG | 0.637854 | 8_1:-20002754 | Msa1184360:CDS |
| AATGAAATGAAACCTGAATG+GGG | 0.643373 | 8_1:-20003410 | Msa1184360:CDS |
| TCACTGTTGGTGATAGAGAG+TGG | 0.647613 | 8_1:-20002986 | Msa1184360:intron |
| ACTTCAGAACTTGTTAACAT+GGG | 0.659774 | 8_1:-20003039 | Msa1184360:CDS |
| AACATGGGTCGCCTCCGATG+TGG | 0.669387 | 8_1:-20003024 | Msa1184360:CDS |
| CCAACCTCAAGTTCTCGCTG+TGG | 0.700988 | 8_1:-20004445 | Msa1184360:CDS |
| AAGTTGGTACTCTACCCAAG+TGG | 0.750027 | 8_1:-20003750 | Msa1184360:CDS |
| ACGTTGACCTCCCAACCACG+AGG | 0.750911 | 8_1:+20003660 | None:intergenic |
| GATAAAGAGAAACTTCCTCG+TGG | 0.768099 | 8_1:-20003675 | Msa1184360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTAGATATAATAATATA+AGG | + | chr8_1:20004203-20004222 | None:intergenic | 10.0% |
| !! | TTGTTAGATATAATAATATA+AGG | + | chr8_1:20004203-20004222 | None:intergenic | 10.0% |
| !! | TCTATACTAATAATATTTAC+AGG | + | chr8_1:20002805-20002824 | None:intergenic | 15.0% |
| !! | AATATTATTAGTATAGAGAT+AGG | - | chr8_1:20002808-20002827 | Msa1184360:intron | 15.0% |
| !! | AGAAGAAAAAAAAAAAGTAA+GGG | + | chr8_1:20003159-20003178 | None:intergenic | 15.0% |
| !! | TAGAAGAAAAAAAAAAAGTA+AGG | + | chr8_1:20003160-20003179 | None:intergenic | 15.0% |
| !!! | AATTTTAACAAAACCAAAAT+AGG | + | chr8_1:20004229-20004248 | None:intergenic | 15.0% |
| !! | ATTGTTATATATGTGTAAAT+AGG | - | chr8_1:20004340-20004359 | Msa1184360:intron | 15.0% |
| !! | TCTATACTAATAATATTTAC+AGG | + | chr8_1:20002805-20002824 | None:intergenic | 15.0% |
| !! | AATATTATTAGTATAGAGAT+AGG | - | chr8_1:20002808-20002827 | Msa1184360:intron | 15.0% |
| !! | AGAAGAAAAAAAAAAAGTAA+GGG | + | chr8_1:20003159-20003178 | None:intergenic | 15.0% |
| !! | TAGAAGAAAAAAAAAAAGTA+AGG | + | chr8_1:20003160-20003179 | None:intergenic | 15.0% |
| !!! | AATTTTAACAAAACCAAAAT+AGG | + | chr8_1:20004229-20004248 | None:intergenic | 15.0% |
| !! | ATTGTTATATATGTGTAAAT+AGG | - | chr8_1:20004340-20004359 | Msa1184360:intron | 15.0% |
| !!! | TCCATTTTTTCAATTTTGAA+CGG | + | chr8_1:20002860-20002879 | None:intergenic | 20.0% |
| !! | AAGAAAAAAAAAAAGTAAGG+GGG | + | chr8_1:20003157-20003176 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAAAAAAGTAAG+GGG | + | chr8_1:20003158-20003177 | None:intergenic | 20.0% |
| !!! | TTATTCTATGTTTTGATAGT+AGG | - | chr8_1:20003275-20003294 | Msa1184360:CDS | 20.0% |
| !! | AAATATATTAGAAGCTAGAT+AGG | + | chr8_1:20003317-20003336 | None:intergenic | 20.0% |
| !!! | TATCTAACAAATTCCTATTT+TGG | - | chr8_1:20004213-20004232 | Msa1184360:intron | 20.0% |
| !!! | TCCATTTTTTCAATTTTGAA+CGG | + | chr8_1:20002860-20002879 | None:intergenic | 20.0% |
| !! | AAGAAAAAAAAAAAGTAAGG+GGG | + | chr8_1:20003157-20003176 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAAAAAAGTAAG+GGG | + | chr8_1:20003158-20003177 | None:intergenic | 20.0% |
| !!! | TTATTCTATGTTTTGATAGT+AGG | - | chr8_1:20003275-20003294 | Msa1184360:CDS | 20.0% |
| !! | AAATATATTAGAAGCTAGAT+AGG | + | chr8_1:20003317-20003336 | None:intergenic | 20.0% |
| !!! | TATCTAACAAATTCCTATTT+TGG | - | chr8_1:20004213-20004232 | Msa1184360:intron | 20.0% |
| ! | ATTTAACACTGAAGAAAAGA+AGG | + | chr8_1:20002735-20002754 | None:intergenic | 25.0% |
| ! | ACCGTTCAAAATTGAAAAAA+TGG | - | chr8_1:20002856-20002875 | Msa1184360:intron | 25.0% |
| ! | TGAAATACCTACATTTATAC+AGG | + | chr8_1:20002994-20003013 | None:intergenic | 25.0% |
| ! | ATCTTAAACAAATAATCAGC+TGG | + | chr8_1:20003038-20003057 | None:intergenic | 25.0% |
| ! | CATGTATATTAATATGAGCT+AGG | - | chr8_1:20003207-20003226 | Msa1184360:CDS | 25.0% |
| ! | GTTGCTATATTATTTATTGC+AGG | - | chr8_1:20003368-20003387 | Msa1184360:CDS | 25.0% |
| ! | TATTATTTATTGCAGGAAGT+TGG | - | chr8_1:20003375-20003394 | Msa1184360:CDS | 25.0% |
| !!! | TTCTTTTTGATTTACCACTT+GGG | + | chr8_1:20003408-20003427 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTGATTTACCACT+TGG | + | chr8_1:20003409-20003428 | None:intergenic | 25.0% |
| ! | AGTGGTAAATCAAAAAGAAA+CGG | - | chr8_1:20003409-20003428 | Msa1184360:CDS | 25.0% |
| ! | TATGTGAATTCAATTTGAAG+TGG | + | chr8_1:20003620-20003639 | None:intergenic | 25.0% |
| ! | TTAATGAAATGAAACCTGAA+TGG | - | chr8_1:20003729-20003748 | Msa1184360:CDS | 25.0% |
| ! | TAATGAAATGAAACCTGAAT+GGG | - | chr8_1:20003730-20003749 | Msa1184360:CDS | 25.0% |
| ! | ATGTGTAAATAGGAATTTAC+TGG | - | chr8_1:20004350-20004369 | Msa1184360:intron | 25.0% |
| ! | ATTTAACACTGAAGAAAAGA+AGG | + | chr8_1:20002735-20002754 | None:intergenic | 25.0% |
| ! | ACCGTTCAAAATTGAAAAAA+TGG | - | chr8_1:20002856-20002875 | Msa1184360:intron | 25.0% |
| ! | TGAAATACCTACATTTATAC+AGG | + | chr8_1:20002994-20003013 | None:intergenic | 25.0% |
| ! | ATCTTAAACAAATAATCAGC+TGG | + | chr8_1:20003038-20003057 | None:intergenic | 25.0% |
| ! | CATGTATATTAATATGAGCT+AGG | - | chr8_1:20003207-20003226 | Msa1184360:CDS | 25.0% |
| ! | GTTGCTATATTATTTATTGC+AGG | - | chr8_1:20003368-20003387 | Msa1184360:CDS | 25.0% |
| ! | TATTATTTATTGCAGGAAGT+TGG | - | chr8_1:20003375-20003394 | Msa1184360:CDS | 25.0% |
| !!! | TTCTTTTTGATTTACCACTT+GGG | + | chr8_1:20003408-20003427 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTGATTTACCACT+TGG | + | chr8_1:20003409-20003428 | None:intergenic | 25.0% |
| ! | AGTGGTAAATCAAAAAGAAA+CGG | - | chr8_1:20003409-20003428 | Msa1184360:CDS | 25.0% |
| ! | TATGTGAATTCAATTTGAAG+TGG | + | chr8_1:20003620-20003639 | None:intergenic | 25.0% |
| ! | TTAATGAAATGAAACCTGAA+TGG | - | chr8_1:20003729-20003748 | Msa1184360:CDS | 25.0% |
| ! | TAATGAAATGAAACCTGAAT+GGG | - | chr8_1:20003730-20003749 | Msa1184360:CDS | 25.0% |
| ! | ATGTGTAAATAGGAATTTAC+TGG | - | chr8_1:20004350-20004369 | Msa1184360:intron | 25.0% |
| AAAATTCGCTCAAAAATGAC+GGG | + | chr8_1:20002773-20002792 | None:intergenic | 30.0% | |
| CAAAATTCGCTCAAAAATGA+CGG | + | chr8_1:20002774-20002793 | None:intergenic | 30.0% | |
| ! | TTCAATTTTGAACGGTAGTT+TGG | + | chr8_1:20002852-20002871 | None:intergenic | 30.0% |
| TCATCTACCTGTATAAATGT+AGG | - | chr8_1:20002984-20003003 | Msa1184360:intron | 30.0% | |
| TTAAACAAATAATCAGCTGG+TGG | + | chr8_1:20003035-20003054 | None:intergenic | 30.0% | |
| ! | TAAGATCCAATCATTTTCCT+TGG | - | chr8_1:20003052-20003071 | Msa1184360:CDS | 30.0% |
| !!! | TTAGTCTACGTTTTGAAAGA+AGG | - | chr8_1:20003244-20003263 | Msa1184360:CDS | 30.0% |
| AAATCAAAAAGAAACGGCAA+AGG | - | chr8_1:20003415-20003434 | Msa1184360:CDS | 30.0% | |
| AACAATTATTTGACCATCCA+AGG | - | chr8_1:20003538-20003557 | Msa1184360:intron | 30.0% | |
| TTCACATACAAGTAAAACTG+TGG | - | chr8_1:20003632-20003651 | Msa1184360:CDS | 30.0% | |
| AATGAAATGAAACCTGAATG+GGG | - | chr8_1:20003731-20003750 | Msa1184360:CDS | 30.0% | |
| TGATCACTTAATTTCATTCG+AGG | - | chr8_1:20003757-20003776 | Msa1184360:intron | 30.0% | |
| GAACTCTTTGATTCATGTAA+TGG | - | chr8_1:20003779-20003798 | Msa1184360:intron | 30.0% | |
| !! | ACTTCAGAACTTGTTAACAT+GGG | - | chr8_1:20004102-20004121 | Msa1184360:CDS | 30.0% |
| AATAATATAAGGATGACGAG+AGG | + | chr8_1:20004192-20004211 | None:intergenic | 30.0% | |
| AAAATTCGCTCAAAAATGAC+GGG | + | chr8_1:20002773-20002792 | None:intergenic | 30.0% | |
| CAAAATTCGCTCAAAAATGA+CGG | + | chr8_1:20002774-20002793 | None:intergenic | 30.0% | |
| ! | TTCAATTTTGAACGGTAGTT+TGG | + | chr8_1:20002852-20002871 | None:intergenic | 30.0% |
| TCATCTACCTGTATAAATGT+AGG | - | chr8_1:20002984-20003003 | Msa1184360:intron | 30.0% | |
| TTAAACAAATAATCAGCTGG+TGG | + | chr8_1:20003035-20003054 | None:intergenic | 30.0% | |
| ! | TAAGATCCAATCATTTTCCT+TGG | - | chr8_1:20003052-20003071 | Msa1184360:CDS | 30.0% |
| !!! | TTAGTCTACGTTTTGAAAGA+AGG | - | chr8_1:20003244-20003263 | Msa1184360:CDS | 30.0% |
| AAATCAAAAAGAAACGGCAA+AGG | - | chr8_1:20003415-20003434 | Msa1184360:CDS | 30.0% | |
| AACAATTATTTGACCATCCA+AGG | - | chr8_1:20003538-20003557 | Msa1184360:intron | 30.0% | |
| TTCACATACAAGTAAAACTG+TGG | - | chr8_1:20003632-20003651 | Msa1184360:CDS | 30.0% | |
| AATGAAATGAAACCTGAATG+GGG | - | chr8_1:20003731-20003750 | Msa1184360:CDS | 30.0% | |
| TGATCACTTAATTTCATTCG+AGG | - | chr8_1:20003757-20003776 | Msa1184360:intron | 30.0% | |
| GAACTCTTTGATTCATGTAA+TGG | - | chr8_1:20003779-20003798 | Msa1184360:intron | 30.0% | |
| !! | ACTTCAGAACTTGTTAACAT+GGG | - | chr8_1:20004102-20004121 | Msa1184360:CDS | 30.0% |
| AATAATATAAGGATGACGAG+AGG | + | chr8_1:20004192-20004211 | None:intergenic | 30.0% | |
| !!! | GAGTCAAATGTTTTTCAAGC+TGG | - | chr8_1:20003101-20003120 | Msa1184360:CDS | 35.0% |
| !!! | TCAAATGTTTTTCAAGCTGG+TGG | - | chr8_1:20003104-20003123 | Msa1184360:CDS | 35.0% |
| TCTCTTTATCTGCAATTGCT+AGG | + | chr8_1:20003456-20003475 | None:intergenic | 35.0% | |
| ATGTTACGTTATACCTTGGA+TGG | + | chr8_1:20003554-20003573 | None:intergenic | 35.0% | |
| TCAGATGTTACGTTATACCT+TGG | + | chr8_1:20003558-20003577 | None:intergenic | 35.0% | |
| TTGATTACTGTAGATGCTGA+TGG | - | chr8_1:20003692-20003711 | Msa1184360:CDS | 35.0% | |
| CACATCTATCTTCTTCATCA+AGG | + | chr8_1:20003808-20003827 | None:intergenic | 35.0% | |
| GAAGAAGATAGATGTGTGTT+TGG | - | chr8_1:20003812-20003831 | Msa1184360:intron | 35.0% | |
| !! | GACTTCAGAACTTGTTAACA+TGG | - | chr8_1:20004101-20004120 | Msa1184360:CDS | 35.0% |
| ! | AGGAATTTACTGGTTATTCC+TGG | - | chr8_1:20004360-20004379 | Msa1184360:intron | 35.0% |
| ! | AATTTACTGGTTATTCCTGG+AGG | - | chr8_1:20004363-20004382 | Msa1184360:intron | 35.0% |
| GCATTCACTGTTGTATTTGA+TGG | + | chr8_1:20004459-20004478 | None:intergenic | 35.0% | |
| !!! | GAGTCAAATGTTTTTCAAGC+TGG | - | chr8_1:20003101-20003120 | Msa1184360:CDS | 35.0% |
| !!! | TCAAATGTTTTTCAAGCTGG+TGG | - | chr8_1:20003104-20003123 | Msa1184360:CDS | 35.0% |
| TCTCTTTATCTGCAATTGCT+AGG | + | chr8_1:20003456-20003475 | None:intergenic | 35.0% | |
| ATGTTACGTTATACCTTGGA+TGG | + | chr8_1:20003554-20003573 | None:intergenic | 35.0% | |
| TCAGATGTTACGTTATACCT+TGG | + | chr8_1:20003558-20003577 | None:intergenic | 35.0% | |
| TTGATTACTGTAGATGCTGA+TGG | - | chr8_1:20003692-20003711 | Msa1184360:CDS | 35.0% | |
| CACATCTATCTTCTTCATCA+AGG | + | chr8_1:20003808-20003827 | None:intergenic | 35.0% | |
| GAAGAAGATAGATGTGTGTT+TGG | - | chr8_1:20003812-20003831 | Msa1184360:intron | 35.0% | |
| !! | GACTTCAGAACTTGTTAACA+TGG | - | chr8_1:20004101-20004120 | Msa1184360:CDS | 35.0% |
| ! | AGGAATTTACTGGTTATTCC+TGG | - | chr8_1:20004360-20004379 | Msa1184360:intron | 35.0% |
| ! | AATTTACTGGTTATTCCTGG+AGG | - | chr8_1:20004363-20004382 | Msa1184360:intron | 35.0% |
| GCATTCACTGTTGTATTTGA+TGG | + | chr8_1:20004459-20004478 | None:intergenic | 35.0% | |
| TTCCTTGGCTGTGGAAAAAA+AGG | - | chr8_1:20003067-20003086 | Msa1184360:CDS | 40.0% | |
| GATAAAGAGAAACTTCCTCG+TGG | - | chr8_1:20003466-20003485 | Msa1184360:intron | 40.0% | |
| AAGTGATCAAAACCCCATTC+AGG | + | chr8_1:20003746-20003765 | None:intergenic | 40.0% | |
| ! | GTTTTTGTGATTCGCCATTC+TGG | - | chr8_1:20003842-20003861 | Msa1184360:intron | 40.0% |
| ! | TGATTCGCCATTCTGGAAAT+TGG | - | chr8_1:20003849-20003868 | Msa1184360:intron | 40.0% |
| ! | GATTCGCCATTCTGGAAATT+GGG | - | chr8_1:20003850-20003869 | Msa1184360:intron | 40.0% |
| AAGTTGCCCAATTTCCAGAA+TGG | + | chr8_1:20003859-20003878 | None:intergenic | 40.0% | |
| CAAGTAAAGGAGCCATATGT+TGG | + | chr8_1:20004079-20004098 | None:intergenic | 40.0% | |
| CAACATATGGCTCCTTTACT+TGG | - | chr8_1:20004077-20004096 | Msa1184360:CDS | 40.0% | |
| !! | GTTCTGAAGTCTCCAAGTAA+AGG | + | chr8_1:20004092-20004111 | None:intergenic | 40.0% |
| ATCTCCAAAACCTTCACTGT+TGG | - | chr8_1:20004142-20004161 | Msa1184360:intron | 40.0% | |
| ! | ATCACCAACAGTGAAGGTTT+TGG | + | chr8_1:20004149-20004168 | None:intergenic | 40.0% |
| CCTGGAGGAAATTCTATAGA+CGG | - | chr8_1:20004378-20004397 | Msa1184360:intron | 40.0% | |
| CTGGAGGAAATTCTATAGAC+GGG | - | chr8_1:20004379-20004398 | Msa1184360:intron | 40.0% | |
| AATTCTATAGACGGGATCAG+TGG | - | chr8_1:20004387-20004406 | Msa1184360:intron | 40.0% | |
| TTTCACAATCTGTTAGCTGC+AGG | + | chr8_1:20004431-20004450 | None:intergenic | 40.0% | |
| TGCAGCTAACAGATTGTGAA+AGG | - | chr8_1:20004430-20004449 | Msa1184360:intron | 40.0% | |
| TTCCTTGGCTGTGGAAAAAA+AGG | - | chr8_1:20003067-20003086 | Msa1184360:CDS | 40.0% | |
| GATAAAGAGAAACTTCCTCG+TGG | - | chr8_1:20003466-20003485 | Msa1184360:intron | 40.0% | |
| AAGTGATCAAAACCCCATTC+AGG | + | chr8_1:20003746-20003765 | None:intergenic | 40.0% | |
| ! | GTTTTTGTGATTCGCCATTC+TGG | - | chr8_1:20003842-20003861 | Msa1184360:intron | 40.0% |
| ! | TGATTCGCCATTCTGGAAAT+TGG | - | chr8_1:20003849-20003868 | Msa1184360:intron | 40.0% |
| ! | GATTCGCCATTCTGGAAATT+GGG | - | chr8_1:20003850-20003869 | Msa1184360:intron | 40.0% |
| AAGTTGCCCAATTTCCAGAA+TGG | + | chr8_1:20003859-20003878 | None:intergenic | 40.0% | |
| CAAGTAAAGGAGCCATATGT+TGG | + | chr8_1:20004079-20004098 | None:intergenic | 40.0% | |
| CAACATATGGCTCCTTTACT+TGG | - | chr8_1:20004077-20004096 | Msa1184360:CDS | 40.0% | |
| !! | GTTCTGAAGTCTCCAAGTAA+AGG | + | chr8_1:20004092-20004111 | None:intergenic | 40.0% |
| ATCTCCAAAACCTTCACTGT+TGG | - | chr8_1:20004142-20004161 | Msa1184360:intron | 40.0% | |
| ! | ATCACCAACAGTGAAGGTTT+TGG | + | chr8_1:20004149-20004168 | None:intergenic | 40.0% |
| CCTGGAGGAAATTCTATAGA+CGG | - | chr8_1:20004378-20004397 | Msa1184360:intron | 40.0% | |
| CTGGAGGAAATTCTATAGAC+GGG | - | chr8_1:20004379-20004398 | Msa1184360:intron | 40.0% | |
| AATTCTATAGACGGGATCAG+TGG | - | chr8_1:20004387-20004406 | Msa1184360:intron | 40.0% | |
| TTTCACAATCTGTTAGCTGC+AGG | + | chr8_1:20004431-20004450 | None:intergenic | 40.0% | |
| TGCAGCTAACAGATTGTGAA+AGG | - | chr8_1:20004430-20004449 | Msa1184360:intron | 40.0% | |
| CCACAGCCAAGGAAAATGAT+TGG | + | chr8_1:20003061-20003080 | None:intergenic | 45.0% | |
| ! | CCAATCATTTTCCTTGGCTG+TGG | - | chr8_1:20003058-20003077 | Msa1184360:CDS | 45.0% |
| !!! | CACCTTTTTTTCCACAGCCA+AGG | + | chr8_1:20003072-20003091 | None:intergenic | 45.0% |
| ! | TTCAAGCTGGTGGATACACA+TGG | - | chr8_1:20003114-20003133 | Msa1184360:CDS | 45.0% |
| !! | AAGTTGGTACTCTACCCAAG+TGG | - | chr8_1:20003391-20003410 | Msa1184360:CDS | 45.0% |
| AAGAGAAACTTCCTCGTGGT+TGG | - | chr8_1:20003470-20003489 | Msa1184360:intron | 45.0% | |
| AGAGAAACTTCCTCGTGGTT+GGG | - | chr8_1:20003471-20003490 | Msa1184360:intron | 45.0% | |
| ! | TGGGCAACTTTTGATGTGTC+CGG | - | chr8_1:20003869-20003888 | Msa1184360:intron | 45.0% |
| TATCTGATGCTTGCCATCGT+CGG | + | chr8_1:20003966-20003985 | None:intergenic | 45.0% | |
| GATGGCAAGCATCAGATATC+TGG | - | chr8_1:20003968-20003987 | Msa1184360:intron | 45.0% | |
| !!! | ATTTTTAGGTTTGCCACCGC+CGG | + | chr8_1:20004002-20004021 | None:intergenic | 45.0% |
| CGGTGGCAAACCTAAAAATC+CGG | - | chr8_1:20004003-20004022 | Msa1184360:intron | 45.0% | |
| GGTGGCAAACCTAAAAATCC+GGG | - | chr8_1:20004004-20004023 | Msa1184360:intron | 45.0% | |
| GTAAAGGAGCCATATGTTGG+AGG | + | chr8_1:20004076-20004095 | None:intergenic | 45.0% | |
| !!! | GGTTTTGGAGATCACCACAT+CGG | + | chr8_1:20004134-20004153 | None:intergenic | 45.0% |
| CTCTCTATCACCAACAGTGA+AGG | + | chr8_1:20004155-20004174 | None:intergenic | 45.0% | |
| !! | TCACTGTTGGTGATAGAGAG+TGG | - | chr8_1:20004155-20004174 | Msa1184360:intron | 45.0% |
| CCGTCTATAGAATTTCCTCC+AGG | + | chr8_1:20004381-20004400 | None:intergenic | 45.0% | |
| CCACAGCCAAGGAAAATGAT+TGG | + | chr8_1:20003061-20003080 | None:intergenic | 45.0% | |
| ! | CCAATCATTTTCCTTGGCTG+TGG | - | chr8_1:20003058-20003077 | Msa1184360:CDS | 45.0% |
| !!! | CACCTTTTTTTCCACAGCCA+AGG | + | chr8_1:20003072-20003091 | None:intergenic | 45.0% |
| ! | TTCAAGCTGGTGGATACACA+TGG | - | chr8_1:20003114-20003133 | Msa1184360:CDS | 45.0% |
| !! | AAGTTGGTACTCTACCCAAG+TGG | - | chr8_1:20003391-20003410 | Msa1184360:CDS | 45.0% |
| AAGAGAAACTTCCTCGTGGT+TGG | - | chr8_1:20003470-20003489 | Msa1184360:intron | 45.0% | |
| AGAGAAACTTCCTCGTGGTT+GGG | - | chr8_1:20003471-20003490 | Msa1184360:intron | 45.0% | |
| ! | TGGGCAACTTTTGATGTGTC+CGG | - | chr8_1:20003869-20003888 | Msa1184360:intron | 45.0% |
| TATCTGATGCTTGCCATCGT+CGG | + | chr8_1:20003966-20003985 | None:intergenic | 45.0% | |
| GATGGCAAGCATCAGATATC+TGG | - | chr8_1:20003968-20003987 | Msa1184360:intron | 45.0% | |
| !!! | ATTTTTAGGTTTGCCACCGC+CGG | + | chr8_1:20004002-20004021 | None:intergenic | 45.0% |
| CGGTGGCAAACCTAAAAATC+CGG | - | chr8_1:20004003-20004022 | Msa1184360:intron | 45.0% | |
| GGTGGCAAACCTAAAAATCC+GGG | - | chr8_1:20004004-20004023 | Msa1184360:intron | 45.0% | |
| GTAAAGGAGCCATATGTTGG+AGG | + | chr8_1:20004076-20004095 | None:intergenic | 45.0% | |
| !!! | GGTTTTGGAGATCACCACAT+CGG | + | chr8_1:20004134-20004153 | None:intergenic | 45.0% |
| CTCTCTATCACCAACAGTGA+AGG | + | chr8_1:20004155-20004174 | None:intergenic | 45.0% | |
| !! | TCACTGTTGGTGATAGAGAG+TGG | - | chr8_1:20004155-20004174 | Msa1184360:intron | 45.0% |
| CCGTCTATAGAATTTCCTCC+AGG | + | chr8_1:20004381-20004400 | None:intergenic | 45.0% | |
| !!! | ATATTATTATTTGTTTTTTT+TGG | - | chr8_1:20004301-20004320 | Msa1184360:intron | 5.0% |
| !!! | ATATTATTATTTGTTTTTTT+TGG | - | chr8_1:20004301-20004320 | Msa1184360:intron | 5.0% |
| !! | CGAGAACTTGAGGTTGGCTT+AGG | + | chr8_1:20002693-20002712 | None:intergenic | 50.0% |
| AACACCACAGCGAGAACTTG+AGG | + | chr8_1:20002703-20002722 | None:intergenic | 50.0% | |
| TCAAGTTCTCGCTGTGGTGT+TGG | - | chr8_1:20002702-20002721 | Msa1184360:CDS | 50.0% | |
| GACAAGCCTCCAACAACATC+TGG | - | chr8_1:20003893-20003912 | Msa1184360:intron | 50.0% | |
| TTTGGAGATCACCACATCGG+AGG | + | chr8_1:20004131-20004150 | None:intergenic | 50.0% | |
| !! | CGAGAACTTGAGGTTGGCTT+AGG | + | chr8_1:20002693-20002712 | None:intergenic | 50.0% |
| AACACCACAGCGAGAACTTG+AGG | + | chr8_1:20002703-20002722 | None:intergenic | 50.0% | |
| TCAAGTTCTCGCTGTGGTGT+TGG | - | chr8_1:20002702-20002721 | Msa1184360:CDS | 50.0% | |
| GACAAGCCTCCAACAACATC+TGG | - | chr8_1:20003893-20003912 | Msa1184360:intron | 50.0% | |
| TTTGGAGATCACCACATCGG+AGG | + | chr8_1:20004131-20004150 | None:intergenic | 50.0% | |
| CCACAGCGAGAACTTGAGGT+TGG | + | chr8_1:20002699-20002718 | None:intergenic | 55.0% | |
| CCAACCTCAAGTTCTCGCTG+TGG | - | chr8_1:20002696-20002715 | Msa1184360:CDS | 55.0% | |
| GAAACTTCCTCGTGGTTGGG+AGG | - | chr8_1:20003474-20003493 | Msa1184360:intron | 55.0% | |
| TGTTGTTGGAGGCTTGTCGC+CGG | + | chr8_1:20003891-20003910 | None:intergenic | 55.0% | |
| GAGGAGCCAGATGTTGTTGG+AGG | + | chr8_1:20003902-20003921 | None:intergenic | 55.0% | |
| GTGGAGGAGCCAGATGTTGT+TGG | + | chr8_1:20003905-20003924 | None:intergenic | 55.0% | |
| TGTTAGAGGCTTGCCGCTGT+CGG | + | chr8_1:20003927-20003946 | None:intergenic | 55.0% | |
| AGCGGCAAGCCTCTAACAAC+TGG | - | chr8_1:20003929-20003948 | Msa1184360:intron | 55.0% | |
| GTGGAGGAGCCAGTTGTTAG+AGG | + | chr8_1:20003941-20003960 | None:intergenic | 55.0% | |
| ! | CAGATATCTGGCTCCTCCAC+CGG | - | chr8_1:20003980-20003999 | Msa1184360:intron | 55.0% |
| ! | GTGGAGGAGCCCGGATTTTT+AGG | + | chr8_1:20004016-20004035 | None:intergenic | 55.0% |
| AAAAATCCGGGCTCCTCCAC+TGG | - | chr8_1:20004016-20004035 | Msa1184360:intron | 55.0% | |
| CAAGCCTCCTATGGGACCTT+CGG | - | chr8_1:20004045-20004064 | Msa1184360:CDS | 55.0% | |
| TATGTTGGAGGCTCCACCGA+AGG | + | chr8_1:20004064-20004083 | None:intergenic | 55.0% | |
| TCGGTGGAGCCTCCAACATA+TGG | - | chr8_1:20004064-20004083 | Msa1184360:CDS | 55.0% | |
| CCACAGCGAGAACTTGAGGT+TGG | + | chr8_1:20002699-20002718 | None:intergenic | 55.0% | |
| CCAACCTCAAGTTCTCGCTG+TGG | - | chr8_1:20002696-20002715 | Msa1184360:CDS | 55.0% | |
| GAAACTTCCTCGTGGTTGGG+AGG | - | chr8_1:20003474-20003493 | Msa1184360:intron | 55.0% | |
| TGTTGTTGGAGGCTTGTCGC+CGG | + | chr8_1:20003891-20003910 | None:intergenic | 55.0% | |
| GAGGAGCCAGATGTTGTTGG+AGG | + | chr8_1:20003902-20003921 | None:intergenic | 55.0% | |
| GTGGAGGAGCCAGATGTTGT+TGG | + | chr8_1:20003905-20003924 | None:intergenic | 55.0% | |
| TGTTAGAGGCTTGCCGCTGT+CGG | + | chr8_1:20003927-20003946 | None:intergenic | 55.0% | |
| AGCGGCAAGCCTCTAACAAC+TGG | - | chr8_1:20003929-20003948 | Msa1184360:intron | 55.0% | |
| GTGGAGGAGCCAGTTGTTAG+AGG | + | chr8_1:20003941-20003960 | None:intergenic | 55.0% | |
| ! | CAGATATCTGGCTCCTCCAC+CGG | - | chr8_1:20003980-20003999 | Msa1184360:intron | 55.0% |
| ! | GTGGAGGAGCCCGGATTTTT+AGG | + | chr8_1:20004016-20004035 | None:intergenic | 55.0% |
| AAAAATCCGGGCTCCTCCAC+TGG | - | chr8_1:20004016-20004035 | Msa1184360:intron | 55.0% | |
| CAAGCCTCCTATGGGACCTT+CGG | - | chr8_1:20004045-20004064 | Msa1184360:CDS | 55.0% | |
| TATGTTGGAGGCTCCACCGA+AGG | + | chr8_1:20004064-20004083 | None:intergenic | 55.0% | |
| TCGGTGGAGCCTCCAACATA+TGG | - | chr8_1:20004064-20004083 | Msa1184360:CDS | 55.0% | |
| ACGTTGACCTCCCAACCACG+AGG | + | chr8_1:20003484-20003503 | None:intergenic | 60.0% | |
| ATGCTTGCCATCGTCGGTGG+TGG | + | chr8_1:20003960-20003979 | None:intergenic | 60.0% | |
| CTGATGCTTGCCATCGTCGG+TGG | + | chr8_1:20003963-20003982 | None:intergenic | 60.0% | |
| ! | ATATCTGGCTCCTCCACCGG+CGG | - | chr8_1:20003983-20004002 | Msa1184360:intron | 60.0% |
| ! | TTTAGGTTTGCCACCGCCGG+TGG | + | chr8_1:20003999-20004018 | None:intergenic | 60.0% |
| TGGTGGCAGCAAGCCTCCTA+TGG | - | chr8_1:20004036-20004055 | Msa1184360:CDS | 60.0% | |
| GGTGGCAGCAAGCCTCCTAT+GGG | - | chr8_1:20004037-20004056 | Msa1184360:CDS | 60.0% | |
| TCCACCGAAGGTCCCATAGG+AGG | + | chr8_1:20004052-20004071 | None:intergenic | 60.0% | |
| AACATGGGTCGCCTCCGATG+TGG | - | chr8_1:20004117-20004136 | Msa1184360:CDS | 60.0% | |
| ACGTTGACCTCCCAACCACG+AGG | + | chr8_1:20003484-20003503 | None:intergenic | 60.0% | |
| ATGCTTGCCATCGTCGGTGG+TGG | + | chr8_1:20003960-20003979 | None:intergenic | 60.0% | |
| CTGATGCTTGCCATCGTCGG+TGG | + | chr8_1:20003963-20003982 | None:intergenic | 60.0% | |
| ! | ATATCTGGCTCCTCCACCGG+CGG | - | chr8_1:20003983-20004002 | Msa1184360:intron | 60.0% |
| ! | TTTAGGTTTGCCACCGCCGG+TGG | + | chr8_1:20003999-20004018 | None:intergenic | 60.0% |
| TGGTGGCAGCAAGCCTCCTA+TGG | - | chr8_1:20004036-20004055 | Msa1184360:CDS | 60.0% | |
| GGTGGCAGCAAGCCTCCTAT+GGG | - | chr8_1:20004037-20004056 | Msa1184360:CDS | 60.0% | |
| TCCACCGAAGGTCCCATAGG+AGG | + | chr8_1:20004052-20004071 | None:intergenic | 60.0% | |
| AACATGGGTCGCCTCCGATG+TGG | - | chr8_1:20004117-20004136 | Msa1184360:CDS | 60.0% | |
| ! | TCTGGCTCCTCCACCGACAG+CGG | - | chr8_1:20003911-20003930 | Msa1184360:intron | 65.0% |
| TAGAGGCTTGCCGCTGTCGG+TGG | + | chr8_1:20003924-20003943 | None:intergenic | 65.0% | |
| ! | CTTGCCATCGTCGGTGGTGG+AGG | + | chr8_1:20003957-20003976 | None:intergenic | 65.0% |
| AATCCGGGCTCCTCCACTGG+TGG | - | chr8_1:20004019-20004038 | Msa1184360:intron | 65.0% | |
| !! | AGGCTTGCTGCCACCAGTGG+AGG | + | chr8_1:20004032-20004051 | None:intergenic | 65.0% |
| !! | AGGAGGCTTGCTGCCACCAG+TGG | + | chr8_1:20004035-20004054 | None:intergenic | 65.0% |
| GCCTCCTATGGGACCTTCGG+TGG | - | chr8_1:20004048-20004067 | Msa1184360:CDS | 65.0% | |
| GGCTCCACCGAAGGTCCCAT+AGG | + | chr8_1:20004055-20004074 | None:intergenic | 65.0% | |
| ! | TCTGGCTCCTCCACCGACAG+CGG | - | chr8_1:20003911-20003930 | Msa1184360:intron | 65.0% |
| TAGAGGCTTGCCGCTGTCGG+TGG | + | chr8_1:20003924-20003943 | None:intergenic | 65.0% | |
| ! | CTTGCCATCGTCGGTGGTGG+AGG | + | chr8_1:20003957-20003976 | None:intergenic | 65.0% |
| AATCCGGGCTCCTCCACTGG+TGG | - | chr8_1:20004019-20004038 | Msa1184360:intron | 65.0% | |
| !! | AGGCTTGCTGCCACCAGTGG+AGG | + | chr8_1:20004032-20004051 | None:intergenic | 65.0% |
| !! | AGGAGGCTTGCTGCCACCAG+TGG | + | chr8_1:20004035-20004054 | None:intergenic | 65.0% |
| GCCTCCTATGGGACCTTCGG+TGG | - | chr8_1:20004048-20004067 | Msa1184360:CDS | 65.0% | |
| GGCTCCACCGAAGGTCCCAT+AGG | + | chr8_1:20004055-20004074 | None:intergenic | 65.0% | |
| AGGCTTGCCGCTGTCGGTGG+AGG | + | chr8_1:20003921-20003940 | None:intergenic | 70.0% | |
| GGCTCCTCCACCACCGACGA+TGG | - | chr8_1:20003950-20003969 | Msa1184360:intron | 70.0% | |
| AGGTTTGCCACCGCCGGTGG+AGG | + | chr8_1:20003996-20004015 | None:intergenic | 70.0% | |
| CTGCCACCAGTGGAGGAGCC+CGG | + | chr8_1:20004025-20004044 | None:intergenic | 70.0% | |
| AGGCTTGCCGCTGTCGGTGG+AGG | + | chr8_1:20003921-20003940 | None:intergenic | 70.0% | |
| GGCTCCTCCACCACCGACGA+TGG | - | chr8_1:20003950-20003969 | Msa1184360:intron | 70.0% | |
| AGGTTTGCCACCGCCGGTGG+AGG | + | chr8_1:20003996-20004015 | None:intergenic | 70.0% | |
| CTGCCACCAGTGGAGGAGCC+CGG | + | chr8_1:20004025-20004044 | None:intergenic | 70.0% | |
| ! | TCTGGCTCCTCCACCGGCGG+TGG | - | chr8_1:20003986-20004005 | Msa1184360:intron | 75.0% |
| ! | TCTGGCTCCTCCACCGGCGG+TGG | - | chr8_1:20003986-20004005 | Msa1184360:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 20002669 | 20004494 | 20002669 | ID=Msa1184360;Name=Msa1184360 |
| chr8_1 | mRNA | 20002669 | 20004494 | 20002669 | ID=Msa1184360-mRNA-1;Parent=Msa1184360;Name=Msa1184360-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|0|0|0.8|1|1|5|0|319 |
| chr8_1 | exon | 20004440 | 20004494 | 20004440 | ID=Msa1184360-mRNA-1:exon:7768;Parent=Msa1184360-mRNA-1 |
| chr8_1 | exon | 20004028 | 20004157 | 20004028 | ID=Msa1184360-mRNA-1:exon:7767;Parent=Msa1184360-mRNA-1 |
| chr8_1 | exon | 20003604 | 20003773 | 20003604 | ID=Msa1184360-mRNA-1:exon:7766;Parent=Msa1184360-mRNA-1 |
| chr8_1 | exon | 20002987 | 20003458 | 20002987 | ID=Msa1184360-mRNA-1:exon:7765;Parent=Msa1184360-mRNA-1 |
| chr8_1 | exon | 20002669 | 20002801 | 20002669 | ID=Msa1184360-mRNA-1:exon:7764;Parent=Msa1184360-mRNA-1 |
| chr8_1 | CDS | 20004440 | 20004494 | 20004440 | ID=Msa1184360-mRNA-1:cds;Parent=Msa1184360-mRNA-1 |
| chr8_1 | CDS | 20004028 | 20004157 | 20004028 | ID=Msa1184360-mRNA-1:cds;Parent=Msa1184360-mRNA-1 |
| chr8_1 | CDS | 20003604 | 20003773 | 20003604 | ID=Msa1184360-mRNA-1:cds;Parent=Msa1184360-mRNA-1 |
| chr8_1 | CDS | 20002987 | 20003458 | 20002987 | ID=Msa1184360-mRNA-1:cds;Parent=Msa1184360-mRNA-1 |
| chr8_1 | CDS | 20002669 | 20002801 | 20002669 | ID=Msa1184360-mRNA-1:cds;Parent=Msa1184360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
