AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184440 MtrunA17_Chr8g0335811 98.238 227 4 0 1 227 1 227 7.42e-171 469
Msa1184440 MtrunA17_Chr8g0383351 45.161 217 107 4 16 220 10 226 7.85e-46 152
Msa1184440 MtrunA17_Chr3g0129361 79.762 84 17 0 137 220 127 210 2.18e-45 150
Msa1184440 MtrunA17_Chr5g0432161 60.870 92 34 1 121 210 386 477 8.72e-34 127
Msa1184440 MtrunA17_Chr5g0432161 59.649 57 22 1 154 210 244 299 8.44e-16 75.9
Msa1184440 MtrunA17_Chr7g0248721 64.286 84 28 2 131 214 118 199 1.41e-33 120
Msa1184440 MtrunA17_Chr5g0418781 66.265 83 28 0 128 210 98 180 2.32e-33 121
Msa1184440 MtrunA17_Chr2g0294231 71.233 73 21 0 138 210 187 259 1.52e-31 118
Msa1184440 MtrunA17_Chr3g0079691 63.529 85 29 1 126 210 469 551 4.42e-31 120
Msa1184440 MtrunA17_Chr3g0079691 61.404 57 21 1 154 210 280 335 1.33e-17 81.3
Msa1184440 MtrunA17_Chr7g0218081 60.465 86 34 0 134 219 390 475 5.20e-31 119
Msa1184440 MtrunA17_Chr7g0218081 63.158 57 20 1 154 210 228 283 1.33e-18 84.0
Msa1184440 MtrunA17_Chr3g0106491 58.696 92 36 1 121 210 330 421 8.27e-31 118
Msa1184440 MtrunA17_Chr3g0106491 52.113 71 29 2 144 210 184 253 6.24e-17 79.0
Msa1184440 MtrunA17_Chr1g0194481 62.651 83 31 0 128 210 132 214 9.62e-31 115
Msa1184440 MtrunA17_Chr4g0051881 71.831 71 20 0 140 210 164 234 9.93e-31 115
Msa1184440 MtrunA17_Chr7g0224801 61.250 80 31 0 142 221 81 160 1.17e-30 111
Msa1184440 MtrunA17_Chr5g0445311 61.538 78 30 0 133 210 343 420 2.08e-30 117
Msa1184440 MtrunA17_Chr5g0445311 46.067 89 47 1 129 217 175 262 4.84e-16 76.6
Msa1184440 MtrunA17_Chr3g0101131 62.821 78 29 0 133 210 394 471 3.22e-30 117
Msa1184440 MtrunA17_Chr3g0101131 59.649 57 22 1 154 210 243 298 2.37e-16 77.4
Msa1184440 MtrunA17_Chr5g0418191 60.000 85 33 1 135 218 301 385 1.23e-29 114
Msa1184440 MtrunA17_Chr5g0418191 63.158 57 20 1 154 210 151 206 2.63e-17 80.1
Msa1184440 MtrunA17_Chr7g0249311 61.842 76 29 0 135 210 373 448 2.68e-29 115
Msa1184440 MtrunA17_Chr7g0249311 62.069 58 21 1 154 211 179 235 2.14e-18 83.6
Msa1184440 MtrunA17_Chr5g0443131 67.606 71 23 0 140 210 143 213 3.10e-29 111
Msa1184440 MtrunA17_Chr7g0249301 62.338 77 29 0 134 210 272 348 3.63e-29 112
Msa1184440 MtrunA17_Chr7g0249301 57.627 59 24 1 153 211 61 118 1.33e-15 74.7
Msa1184440 MtrunA17_Chr8g0386241 36.184 152 86 3 84 227 27 175 5.44e-29 107
Msa1184440 MtrunA17_Chr7g0270191 60.241 83 33 0 128 210 119 201 9.61e-29 109
Msa1184440 MtrunA17_Chr4g0004911 60.526 76 30 0 135 210 317 392 1.33e-28 112
Msa1184440 MtrunA17_Chr4g0004911 56.140 57 25 0 154 210 184 240 5.62e-16 76.3
Msa1184440 MtrunA17_Chr4g0042831 57.647 85 35 1 135 218 259 343 1.68e-28 110
Msa1184440 MtrunA17_Chr4g0042831 56.140 57 25 0 154 210 145 201 4.87e-15 73.2
Msa1184440 MtrunA17_Chr4g0068541 65.753 73 25 0 138 210 192 264 2.09e-28 110
Msa1184440 MtrunA17_Chr7g0243891 57.500 80 34 0 131 210 351 430 3.86e-28 111
Msa1184440 MtrunA17_Chr7g0243891 57.895 57 23 1 154 210 216 271 2.14e-15 74.7
Msa1184440 MtrunA17_Chr3g0129321 61.842 76 28 1 140 214 104 179 7.01e-28 105
Msa1184440 MtrunA17_Chr1g0150801 57.143 77 32 1 134 210 83 158 1.64e-26 100
Msa1184440 MtrunA17_Chr8g0383251 48.980 98 44 2 113 210 73 164 3.35e-25 97.4
Msa1184440 MtrunA17_Chr7g0263531 58.108 74 31 0 137 210 344 417 1.33e-24 100
Msa1184440 MtrunA17_Chr7g0263531 62.500 56 20 1 155 210 190 244 1.35e-16 77.8
Msa1184440 MtrunA17_Chr1g0188941 56.579 76 33 0 135 210 32 107 4.23e-24 92.8
Msa1184440 MtrunA17_Chr5g0447701 52.703 74 35 0 139 212 237 310 9.47e-22 92.4
Msa1184440 MtrunA17_Chr5g0447701 50.746 67 31 2 152 218 90 154 3.01e-12 65.1
Msa1184440 MtrunA17_Chr4g0074001 49.315 73 37 0 138 210 343 415 1.40e-20 89.7
Msa1184440 MtrunA17_Chr1g0189391 48.101 79 40 1 141 218 84 162 1.65e-20 88.2
Msa1184440 MtrunA17_Chr7g0238921 51.190 84 37 1 127 210 101 180 3.66e-20 87.0
Msa1184440 MtrunA17_Chr4g0060271 50.667 75 36 1 138 211 239 313 5.24e-20 88.2
Msa1184440 MtrunA17_Chr7g0270831 41.228 114 54 3 108 210 162 273 2.17e-19 85.9
Msa1184440 MtrunA17_Chr2g0288871 45.122 82 44 1 130 210 281 362 2.23e-19 86.3
Msa1184440 MtrunA17_Chr3g0139021 30.890 191 100 9 39 217 210 380 4.30e-19 84.7
Msa1184440 MtrunA17_Chr4g0075201 45.122 82 44 1 130 210 243 324 7.60e-19 84.7
Msa1184440 MtrunA17_Chr3g0099641 46.053 76 40 1 137 211 234 309 8.15e-19 84.3
Msa1184440 MtrunA17_Chr4g0053281 44.578 83 42 2 130 211 245 324 9.87e-19 83.2
Msa1184440 MtrunA17_Chr6g0485431 47.222 72 37 1 140 210 140 211 1.71e-18 82.8
Msa1184440 MtrunA17_Chr2g0322391 47.368 76 39 1 137 211 332 407 1.77e-18 83.6
Msa1184440 MtrunA17_Chr1g0147881 44.186 86 44 2 127 211 238 320 4.05e-18 81.6
Msa1184440 MtrunA17_Chr4g0025061 46.835 79 41 1 133 210 339 417 1.43e-17 80.9
Msa1184440 MtrunA17_Chr5g0401821 42.529 87 46 2 126 211 174 257 4.28e-17 77.8
Msa1184440 MtrunA17_Chr4g0051181 47.297 74 38 1 138 210 227 300 6.80e-17 79.0
Msa1184440 MtrunA17_Chr7g0216891 47.887 71 36 1 141 210 206 276 7.25e-17 79.0
Msa1184440 MtrunA17_Chr4g0071521 39.080 87 49 2 126 211 220 303 1.75e-16 76.6
Msa1184440 MtrunA17_Chr2g0333851 39.130 115 61 3 105 210 112 226 1.81e-16 76.6
Msa1184440 MtrunA17_Chr3g0136961 51.667 60 28 1 153 211 137 196 1.97e-16 76.3
Msa1184440 MtrunA17_Chr2g0302391 48.649 74 37 1 138 210 195 268 2.54e-16 77.0
Msa1184440 MtrunA17_Chr1g0184691 42.169 83 44 2 130 211 272 351 4.67e-16 75.9
Msa1184440 MtrunA17_Chr1g0150281 52.632 57 26 1 155 210 141 197 5.58e-16 75.1
Msa1184440 MtrunA17_Chr3g0126391 54.237 59 24 1 153 208 132 190 1.30e-15 74.7
Msa1184440 MtrunA17_Chr4g0001361 50.000 60 29 1 152 210 160 219 2.55e-15 73.6
Msa1184440 MtrunA17_Chr5g0447711 44.595 74 41 0 139 212 215 288 2.66e-15 73.6
Msa1184440 MtrunA17_Chr7g0228941 44.000 75 40 2 143 216 42 115 3.52e-15 69.7
Msa1184440 MtrunA17_Chr4g0025051 47.887 71 36 1 141 210 322 392 1.25e-14 72.4
Msa1184440 MtrunA17_Chr5g0432071 32.639 144 76 4 70 210 34 159 2.42e-14 69.3
Msa1184440 MtrunA17_Chr1g0150271 45.000 60 32 1 152 210 99 158 2.62e-14 70.1
Msa1184440 MtrunA17_Chr7g0270051 54.386 57 25 1 155 210 54 110 1.13e-13 68.6
Msa1184440 MtrunA17_Chr2g0293481 33.065 124 73 3 97 210 201 324 1.33e-13 69.3
Msa1184440 MtrunA17_Chr8g0387981 40.000 90 46 2 127 208 100 189 1.76e-13 68.6
Msa1184440 MtrunA17_Chr2g0289181 50.000 58 28 1 155 211 15 72 2.24e-13 67.0
Msa1184440 MtrunA17_Chr8g0348311 42.308 78 42 3 134 210 137 212 3.18e-13 67.8
Msa1184440 MtrunA17_Chr8g0379461 50.000 58 28 1 155 211 77 134 4.31e-13 66.6
Msa1184440 MtrunA17_Chr7g0244981 50.000 58 26 1 154 208 122 179 8.87e-13 66.2
Msa1184440 MtrunA17_Chr2g0284321 48.276 58 29 1 155 211 36 93 1.01e-12 65.1
Msa1184440 MtrunA17_Chr8g0387501 49.153 59 29 1 153 210 128 186 1.44e-12 65.5
Msa1184440 MtrunA17_Chr7g0275531 45.070 71 36 1 141 208 105 175 1.87e-12 65.5
Msa1184440 MtrunA17_Chr2g0315361 35.714 98 57 2 114 208 111 205 1.87e-12 65.5
Msa1184440 MtrunA17_Chr2g0315381 38.144 97 54 3 115 208 108 201 2.04e-12 65.1
Msa1184440 MtrunA17_Chr7g0244971 33.813 139 62 6 113 227 73 205 3.42e-12 64.3
Msa1184440 MtrunA17_Chr1g0202461 39.241 79 46 2 134 211 242 319 3.48e-12 65.1
Msa1184440 MtrunA17_Chr7g0248691 41.573 89 47 3 124 210 126 211 4.97e-12 64.3
Msa1184440 MtrunA17_Chr2g0319961 37.895 95 48 3 127 211 45 138 1.36e-11 62.4
Msa1184440 MtrunA17_Chr8g0334541 44.776 67 31 2 154 217 103 166 1.45e-11 62.4
Msa1184440 MtrunA17_Chr8g0347251 45.763 59 29 1 153 208 135 193 3.22e-11 62.0
Msa1184440 MtrunA17_Chr8g0350621 44.828 58 29 1 154 208 111 168 5.78e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184440 AT2G44745.1 58.547 234 68 9 3 227 5 218 6.86e-74 223
Msa1184440 AT4G39410.1 75.000 96 20 1 130 221 199 294 2.01e-45 153
Msa1184440 AT2G46130.1 65.432 81 27 1 135 215 11 90 3.40e-35 121
Msa1184440 AT1G69310.4 66.265 83 28 0 128 210 121 203 8.49e-35 125
Msa1184440 AT1G69310.2 66.265 83 28 0 128 210 121 203 8.49e-35 125
Msa1184440 AT1G69310.1 66.265 83 28 0 128 210 121 203 8.49e-35 125
Msa1184440 AT1G64000.1 64.706 85 29 1 130 214 90 173 1.03e-33 120
Msa1184440 AT5G41570.1 60.000 90 35 1 125 214 69 157 1.61e-33 119
Msa1184440 AT4G18170.1 65.060 83 29 0 128 210 146 228 1.64e-31 117
Msa1184440 AT4G26640.5 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1184440 AT4G26640.5 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1184440 AT4G26640.6 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1184440 AT4G26640.6 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1184440 AT4G26640.4 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1184440 AT4G26640.4 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1184440 AT4G26640.3 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1184440 AT4G26640.3 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1184440 AT5G56270.1 67.105 76 25 0 135 210 468 543 6.01e-31 120
Msa1184440 AT5G56270.1 59.649 57 22 1 154 210 273 328 7.15e-17 79.3
Msa1184440 AT4G26640.7 55.914 93 41 0 135 227 322 414 8.51e-31 119
Msa1184440 AT4G26640.7 59.322 59 23 1 152 210 169 226 2.32e-16 77.8
Msa1184440 AT3G01080.2 65.789 76 26 0 135 210 325 400 8.57e-31 118
Msa1184440 AT3G01080.2 59.649 57 22 1 154 210 205 260 5.67e-17 79.3
Msa1184440 AT4G26640.1 55.914 93 41 0 135 227 290 382 9.44e-31 118
Msa1184440 AT4G26640.1 59.322 59 23 1 152 210 137 194 3.08e-16 77.4
Msa1184440 AT2G38470.1 65.789 76 26 0 135 210 343 418 1.26e-30 118
Msa1184440 AT2G38470.1 57.895 57 23 1 154 210 184 239 8.13e-15 73.2
Msa1184440 AT5G13080.1 55.435 92 36 1 141 227 54 145 1.31e-30 110
Msa1184440 AT4G26640.2 55.914 93 41 0 135 227 362 454 1.32e-30 118
Msa1184440 AT4G26640.2 59.322 59 23 1 152 210 209 266 2.47e-16 77.8
Msa1184440 AT3G01080.1 65.789 76 26 0 135 210 287 362 1.65e-30 117
Msa1184440 AT3G01080.1 59.649 57 22 1 154 210 167 222 1.12e-16 78.6
Msa1184440 AT5G49520.1 69.863 73 22 0 138 210 205 277 1.98e-30 116
Msa1184440 AT2G30250.1 58.427 89 37 0 122 210 296 384 4.62e-30 115
Msa1184440 AT2G30250.1 44.737 76 36 2 135 210 152 221 8.82e-13 67.0
Msa1184440 AT5G26170.1 67.606 71 23 0 141 211 100 170 4.76e-30 110
Msa1184440 AT1G13960.1 57.647 85 36 0 126 210 381 465 7.50e-30 116
Msa1184440 AT1G13960.1 61.017 59 22 1 154 212 229 286 2.24e-17 80.9
Msa1184440 AT1G13960.2 57.647 85 36 0 126 210 228 312 1.04e-29 114
Msa1184440 AT1G13960.2 61.017 59 22 1 154 212 76 133 6.33e-17 79.0
Msa1184440 AT2G46130.2 60.494 81 27 2 135 215 11 86 1.24e-29 107
Msa1184440 AT1G29860.1 67.123 73 24 0 138 210 120 192 2.98e-29 110
Msa1184440 AT1G69310.3 61.446 83 28 1 128 210 121 199 3.49e-29 110
Msa1184440 AT5G07100.2 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1184440 AT5G07100.2 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1184440 AT5G07100.4 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1184440 AT5G07100.4 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1184440 AT5G07100.5 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1184440 AT5G07100.5 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1184440 AT5G07100.3 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1184440 AT5G07100.3 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1184440 AT5G07100.1 51.515 99 48 0 112 210 192 290 3.90e-29 111
Msa1184440 AT5G07100.1 56.140 57 25 0 154 210 117 173 1.33e-15 74.7
Msa1184440 AT4G26440.1 49.219 128 50 2 106 219 311 437 4.52e-29 114
Msa1184440 AT4G26440.1 60.345 58 22 1 154 211 178 234 2.52e-17 80.9
Msa1184440 AT2G03340.1 60.000 80 32 0 131 210 392 471 8.71e-29 113
Msa1184440 AT2G03340.1 63.158 57 20 1 154 210 250 305 4.94e-17 79.7
Msa1184440 AT2G47260.1 60.241 83 33 0 128 210 148 230 6.98e-28 108
Msa1184440 AT5G46350.1 66.197 71 24 0 140 210 169 239 1.27e-27 107
Msa1184440 AT3G01970.1 58.025 81 34 0 141 221 52 132 4.28e-27 101
Msa1184440 AT5G64810.1 61.429 70 27 0 141 210 97 166 8.26e-27 102
Msa1184440 AT3G62340.1 59.756 82 31 1 129 210 95 174 2.62e-24 97.8
Msa1184440 AT2G04880.2 49.438 89 45 0 122 210 251 339 4.45e-24 99.8
Msa1184440 AT2G04880.2 57.627 59 24 1 152 210 109 166 1.01e-15 75.9
Msa1184440 AT2G04880.1 49.438 89 45 0 122 210 275 363 5.90e-24 99.8
Msa1184440 AT2G04880.1 57.627 59 24 1 152 210 109 166 1.19e-15 75.9
Msa1184440 AT1G55600.1 57.143 70 30 0 141 210 294 363 2.54e-23 97.8
Msa1184440 AT2G37260.2 66.667 60 20 0 151 210 264 323 4.27e-23 95.9
Msa1184440 AT2G37260.2 61.404 57 21 1 155 211 84 139 2.79e-15 73.9
Msa1184440 AT2G37260.3 66.667 60 20 0 151 210 266 325 4.42e-23 95.9
Msa1184440 AT2G37260.3 61.404 57 21 1 155 211 86 141 2.61e-15 74.3
Msa1184440 AT2G37260.1 66.667 60 20 0 151 210 346 405 6.66e-23 96.3
Msa1184440 AT2G37260.1 61.404 57 21 1 155 211 166 221 2.20e-15 74.7
Msa1184440 AT5G15130.2 44.444 90 49 1 123 211 154 243 6.66e-21 90.9
Msa1184440 AT2G21900.1 44.444 90 47 1 124 210 76 165 7.27e-21 87.0
Msa1184440 AT5G15130.1 44.444 90 49 1 123 211 196 285 9.06e-21 90.5
Msa1184440 AT4G30935.1 51.429 70 34 0 141 210 318 387 4.07e-20 88.6
Msa1184440 AT4G04450.2 38.983 118 58 3 100 210 145 255 5.19e-20 88.2
Msa1184440 AT2G23320.1 38.760 129 70 3 84 211 178 298 9.74e-20 86.3
Msa1184440 AT4G04450.1 38.983 118 58 3 100 210 239 349 2.04e-19 86.7
Msa1184440 AT1G62300.1 49.333 75 37 1 137 210 295 369 5.63e-19 85.5
Msa1184440 AT5G28650.1 40.000 105 57 3 108 211 221 320 6.27e-19 84.3
Msa1184440 AT4G24240.1 39.796 98 55 2 126 222 256 350 6.35e-19 84.3
Msa1184440 AT4G22070.4 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1184440 AT4G22070.3 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1184440 AT4G22070.2 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1184440 AT4G22070.1 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1184440 AT3G04670.1 39.423 104 57 3 109 211 222 320 5.27e-18 81.6
Msa1184440 AT2G30590.1 46.512 86 42 2 126 210 288 370 6.45e-18 81.6
Msa1184440 AT4G31550.2 44.706 85 43 2 127 210 221 302 9.14e-18 80.9
Msa1184440 AT3G01080.3 59.649 57 22 1 154 210 205 260 9.23e-18 80.9
Msa1184440 AT4G01720.1 50.000 74 36 1 138 210 223 296 1.32e-17 81.3
Msa1184440 AT5G43290.1 50.704 71 34 1 141 210 100 170 1.92e-17 79.3
Msa1184440 AT4G31550.1 45.122 82 41 2 130 210 225 303 2.60e-17 79.7
Msa1184440 AT1G18860.1 46.667 75 39 1 137 210 222 296 3.09e-17 80.5
Msa1184440 AT2G24570.1 45.122 82 41 2 130 210 222 300 5.03e-17 79.0
Msa1184440 AT2G25000.2 47.761 67 33 2 147 211 95 161 7.58e-17 77.0
Msa1184440 AT2G25000.4 47.761 67 33 2 147 211 95 161 7.58e-17 77.0
Msa1184440 AT2G25000.3 47.761 67 33 2 147 211 117 183 1.19e-16 76.6
Msa1184440 AT1G68150.1 48.649 74 37 1 138 210 219 292 1.66e-16 77.8
Msa1184440 AT2G25000.1 47.761 67 33 2 147 211 138 204 1.85e-16 76.6
Msa1184440 AT4G31800.2 50.847 59 28 1 153 210 110 168 2.08e-16 75.9
Msa1184440 AT4G31800.1 50.847 59 28 1 153 210 175 233 3.96e-16 76.3
Msa1184440 AT1G80840.1 51.667 60 28 1 152 210 144 203 5.92e-16 75.5
Msa1184440 AT4G01250.1 41.111 90 49 3 122 210 99 185 2.01e-15 73.9
Msa1184440 AT1G69810.2 43.421 76 41 2 137 210 128 203 1.01e-13 69.7
Msa1184440 AT2G34830.2 30.857 175 90 7 50 210 124 281 1.08e-13 69.7
Msa1184440 AT2G34830.1 30.857 175 90 7 50 210 115 272 1.13e-13 69.7
Msa1184440 AT1G69810.1 43.421 76 41 2 137 210 186 261 1.28e-13 69.7
Msa1184440 AT1G29280.1 44.615 65 35 1 147 210 67 131 2.43e-13 67.8
Msa1184440 AT4G12020.4 51.667 60 28 1 153 212 467 525 5.10e-13 68.6
Msa1184440 AT4G12020.4 70.000 40 12 0 135 174 622 661 8.62e-12 64.7
Msa1184440 AT4G12020.10 51.667 60 28 1 153 212 467 525 5.14e-13 68.2
Msa1184440 AT4G12020.10 70.000 40 12 0 135 174 622 661 8.45e-12 64.7
Msa1184440 AT4G12020.2 51.667 60 28 1 153 212 467 525 5.20e-13 68.2
Msa1184440 AT4G12020.2 70.000 40 12 0 135 174 622 661 8.62e-12 64.7
Msa1184440 AT4G12020.3 51.667 60 28 1 153 212 467 525 5.24e-13 68.2
Msa1184440 AT4G12020.3 70.000 40 12 0 135 174 622 661 8.30e-12 64.7
Msa1184440 AT4G12020.1 51.667 60 28 1 153 212 467 525 5.52e-13 68.2
Msa1184440 AT4G12020.1 70.000 40 12 0 135 174 622 661 8.91e-12 64.7
Msa1184440 AT4G12020.9 51.667 60 28 1 153 212 467 525 5.52e-13 68.2
Msa1184440 AT4G12020.9 70.000 40 12 0 135 174 622 661 8.91e-12 64.7
Msa1184440 AT4G12020.7 51.667 60 28 1 153 212 467 525 5.57e-13 68.2
Msa1184440 AT4G12020.7 70.000 40 12 0 135 174 622 661 9.25e-12 64.7
Msa1184440 AT4G12020.6 51.667 60 28 1 153 212 467 525 5.62e-13 68.2
Msa1184440 AT4G12020.6 70.000 40 12 0 135 174 622 661 8.73e-12 64.7
Msa1184440 AT4G12020.8 51.667 60 28 1 153 212 467 525 5.62e-13 68.2
Msa1184440 AT4G12020.8 70.000 40 12 0 135 174 622 661 8.73e-12 64.7
Msa1184440 AT4G12020.5 51.667 60 28 1 153 212 400 458 6.08e-13 68.2
Msa1184440 AT4G12020.5 70.000 40 12 0 135 174 555 594 9.44e-12 64.7
Msa1184440 AT4G12020.11 51.667 60 28 1 153 212 467 525 8.11e-13 67.8
Msa1184440 AT4G12020.11 70.000 40 12 0 135 174 622 661 1.03e-11 64.3
Msa1184440 AT1G30650.1 38.043 92 54 3 122 210 183 274 1.22e-12 66.6
Msa1184440 AT2G40740.1 51.724 58 25 1 154 208 173 230 2.04e-12 65.5
Msa1184440 AT3G56400.1 32.673 101 61 2 111 208 81 177 2.23e-12 65.5
Msa1184440 AT4G23550.1 45.902 61 32 1 151 210 137 197 2.68e-12 65.5
Msa1184440 AT2G40740.3 51.724 58 25 1 154 208 182 239 2.71e-12 65.1
Msa1184440 AT1G66600.1 49.153 59 27 1 153 208 102 160 3.08e-12 64.3
Msa1184440 AT1G66550.2 48.276 58 27 1 154 208 103 160 3.53e-12 64.3
Msa1184440 AT1G66560.1 48.276 58 27 1 154 208 103 160 3.98e-12 64.3
Msa1184440 AT1G66550.1 48.276 58 27 1 154 208 108 165 4.49e-12 64.3
Msa1184440 AT2G40750.1 37.895 95 49 3 124 208 115 209 7.38e-12 64.3
Msa1184440 AT3G58710.1 40.506 79 45 2 145 221 62 140 9.80e-12 63.5
Msa1184440 AT3G58710.2 40.506 79 45 2 145 221 61 139 1.03e-11 63.2
Msa1184440 AT5G52830.1 49.123 57 28 1 155 210 166 222 1.13e-11 63.5
Msa1184440 AT5G01900.1 39.535 86 41 3 148 222 104 189 2.27e-11 62.4
Msa1184440 AT5G22570.1 49.123 57 26 1 155 208 111 167 4.43e-11 61.6

Find 67 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAACTTGGAGATCATAAT+TGG 0.180861 8_1:-20177129 None:intergenic
TATGAAATAAAATCCTAATT+TGG 0.192989 8_1:-20177073 None:intergenic
TATTTATATACATACGTAAA+TGG 0.225849 8_1:-20182832 None:intergenic
ATAAAATCCTAATTTGGATT+TGG 0.248345 8_1:-20177067 None:intergenic
TAAAATCCTAATTTGGATTT+GGG 0.281426 8_1:-20177066 None:intergenic
ATTGAACAAAACCCATTTCA+TGG 0.296272 8_1:-20177175 None:intergenic
ATTTCATAAAAGAAGGGATA+TGG 0.300649 8_1:+20177088 Msa1184440:exon
TTCTCATCACTCACAGCTTT+GGG 0.313305 8_1:-20177839 None:intergenic
AGATATCCCAAATCCAAATT+AGG 0.315846 8_1:+20177060 Msa1184440:five_prime_UTR
CTCTCAAGCTATCCATGAAA+TGG 0.321044 8_1:+20177163 Msa1184440:CDS
ATTCTCATCACTCACAGCTT+TGG 0.324655 8_1:-20177840 None:intergenic
ATTGAGAAAGTTGAGAAGGT+TGG 0.338269 8_1:-20177244 None:intergenic
TTGAGAAAGTTGAGAAGGTT+GGG 0.349918 8_1:-20177243 None:intergenic
TTCAATCTTTGTTTCAAAGA+TGG 0.381500 8_1:+20182785 Msa1184440:three_prime_UTR
CTCTCCAATGGAATTCTAAA+GGG 0.385549 8_1:-20176910 None:intergenic
CATCTACATCACTTCTTGTC+TGG 0.400937 8_1:-20178231 None:intergenic
GGTTACAAATGGAGGAAGTA+TGG 0.401960 8_1:+20178265 Msa1184440:CDS
TAGTAGTGACAAGATCATTA+TGG 0.415610 8_1:-20177346 None:intergenic
CTTTCTCAATCTCTAAATTC+CGG 0.416525 8_1:+20177257 Msa1184440:CDS
TCTCTCCAATGGAATTCTAA+AGG 0.428741 8_1:-20176911 None:intergenic
CATTCCCTTTAGAATTCCAT+TGG 0.460035 8_1:+20176906 Msa1184440:five_prime_UTR
ATTATAATTACCTTGGATGA+AGG 0.467552 8_1:-20178309 None:intergenic
AACTCCTTGGAACAACGAAC+AGG 0.468098 8_1:+20177370 Msa1184440:CDS
ATTATGTCTGCCTTCATAAG+TGG 0.474936 8_1:-20182580 None:intergenic
TCTCAAGCTATCCATGAAAT+GGG 0.477777 8_1:+20177164 Msa1184440:CDS
AGAGATTGAGAAAGTTGAGA+AGG 0.481462 8_1:-20177248 None:intergenic
GGCGTTGGTGGTGCTACGGC+CGG 0.484990 8_1:-20177276 None:intergenic
TACAAATTTATGACATGTGA+GGG 0.489544 8_1:-20176969 None:intergenic
GAAACTTGGAGATCATAATT+GGG 0.491669 8_1:-20177128 None:intergenic
TGTGACGGCTGCACCGGTAG+TGG 0.499548 8_1:-20177297 None:intergenic
AAGATCATTATGGCTAAATC+CGG 0.500033 8_1:-20177336 None:intergenic
AGCACCACCAACGCCACTAC+CGG 0.520442 8_1:+20177284 Msa1184440:CDS
GCTGCACACATAACAATTGT+CGG 0.522647 8_1:+20182508 Msa1184440:CDS
CATTTCATGGATAGCTTGAG+AGG 0.523950 8_1:-20177162 None:intergenic
TGCTTGATGATGGTTACAAA+TGG 0.537448 8_1:+20178254 Msa1184440:CDS
AGGTATTTGTGAATGAAACT+TGG 0.539388 8_1:-20177142 None:intergenic
AGAAGAGCAAGGCGAAAGTG+AGG 0.541509 8_1:+20178179 Msa1184440:CDS
TAGTGGCGTTGGTGGTGCTA+CGG 0.543122 8_1:-20177280 None:intergenic
ACCACCTGTTCGTTGTTCCA+AGG 0.544699 8_1:-20177374 None:intergenic
CTGCACACATAACAATTGTC+GGG 0.546740 8_1:+20182509 Msa1184440:CDS
TGCACTGGAAATACTAGTGA+TGG 0.547346 8_1:+20177863 Msa1184440:CDS
ATATATAGGTGGAGGAGTGG+AGG 0.551301 8_1:+20178151 Msa1184440:intron
GGCTGCACCGGTAGTGGCGT+TGG 0.551478 8_1:-20177291 None:intergenic
ATGATATATAGGTGGAGGAG+TGG 0.558137 8_1:+20178148 Msa1184440:intron
TGCACCGGTAGTGGCGTTGG+TGG 0.563104 8_1:-20177288 None:intergenic
ACAACTACTACCGTGGCTGC+CGG 0.563419 8_1:+20177317 Msa1184440:CDS
ATGGTGATAACCACTTATGA+AGG 0.566894 8_1:+20182570 Msa1184440:CDS
GAAGGTTGGGATTGTGTAGA+GGG 0.569637 8_1:-20177230 None:intergenic
CTTGTCTGGAAACAAAACCT+TGG 0.574196 8_1:-20178217 None:intergenic
GATGTAGATGTGCTTGATGA+TGG 0.574505 8_1:+20178244 Msa1184440:CDS
GTGAGTGATGAGAATTGCAC+TGG 0.574611 8_1:+20177848 Msa1184440:CDS
ATGGCTAAATCCGGCAGCCA+CGG 0.578404 8_1:-20177327 None:intergenic
AGAAGGTTGGGATTGTGTAG+AGG 0.578720 8_1:-20177231 None:intergenic
AGTAGTTGTGACGGCTGCAC+CGG 0.584577 8_1:-20177303 None:intergenic
TTGTCACTACTAGAACTCCT+TGG 0.585526 8_1:+20177357 Msa1184440:CDS
GGAGGAAACTTAGAGAGCCA+AGG 0.588730 8_1:+20178200 Msa1184440:CDS
TGGAGGAGCAGAGAAGAGCA+AGG 0.596711 8_1:+20178168 Msa1184440:CDS
CTAGTGATGGCAACAACACA+TGG 0.604178 8_1:+20177876 Msa1184440:CDS
CATAAAAGAAGGGATATGGA+AGG 0.606921 8_1:+20177092 Msa1184440:exon
TCAAGAATAGCCTTCATCCA+AGG 0.610641 8_1:+20178299 Msa1184440:CDS
ATACAAATTTATGACATGTG+AGG 0.622055 8_1:-20176970 None:intergenic
AGAGCAAGGCGAAAGTGAGG+AGG 0.623548 8_1:+20178182 Msa1184440:CDS
AGCCACGGTAGTAGTTGTGA+CGG 0.629318 8_1:-20177312 None:intergenic
ACTCTCAGAAGATTGTCGTA+TGG 0.646484 8_1:+20182551 Msa1184440:CDS
AGCCGTCACAACTACTACCG+TGG 0.652734 8_1:+20177310 Msa1184440:CDS
GAAGAATTAGAGTCGTCACA+AGG 0.658426 8_1:-20182609 None:intergenic
TTGATGATGGTTACAAATGG+AGG 0.665075 8_1:+20178257 Msa1184440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATCATAATACAATAA+CGG - chr8_1:20178374-20178393 None:intergenic 10.0%
!!! ACTTTAAAAAAATAACTATA+CGG - chr8_1:20180575-20180594 None:intergenic 10.0%
!!! TATTTATTTTTTAACAAGAA+AGG - chr8_1:20180824-20180843 None:intergenic 10.0%
!!! AAAACATTTTTATTTTATTG+CGG + chr8_1:20181918-20181937 Msa1184440:intron 10.0%
!!! TTTTCTTTTTGTTTCTTATA+TGG - chr8_1:20177022-20177041 None:intergenic 15.0%
!! TATGAAATAAAATCCTAATT+TGG - chr8_1:20177076-20177095 None:intergenic 15.0%
!!! GATTTTATTTCATAAAAGAA+GGG + chr8_1:20177082-20177101 Msa1184440:five_prime_UTR 15.0%
!! AATTCAATTGATGTTAAATT+TGG - chr8_1:20177486-20177505 None:intergenic 15.0%
!! ACTAAATAATTATACATACA+GGG - chr8_1:20177577-20177596 None:intergenic 15.0%
!! AACTAAATAATTATACATAC+AGG - chr8_1:20177578-20177597 None:intergenic 15.0%
!! GAAAAAAAAAACATTGAAAT+TGG - chr8_1:20177921-20177940 None:intergenic 15.0%
!! AATAAAAATGATCCAAAAAA+AGG - chr8_1:20178059-20178078 None:intergenic 15.0%
!! AAAAATGAAATATAGTAGAT+CGG + chr8_1:20178611-20178630 Msa1184440:intron 15.0%
!!! GTATTTTTTTGAGTAATATT+TGG + chr8_1:20179066-20179085 Msa1184440:intron 15.0%
!! GAAAAATAGAAAGATATTAT+TGG + chr8_1:20179437-20179456 Msa1184440:intron 15.0%
!!! AATTACTTCTAATATTTTGT+GGG - chr8_1:20180497-20180516 None:intergenic 15.0%
!!! TGTTATTTGAAATACTTATT+TGG + chr8_1:20180597-20180616 Msa1184440:intron 15.0%
!!! TTGAAATTTTTGTTCATTTA+AGG - chr8_1:20180705-20180724 None:intergenic 15.0%
!! TTAAATGAACAAAAATTTCA+AGG + chr8_1:20180704-20180723 Msa1184440:intron 15.0%
!!! AAGAAAACATTTTATCTTAA+AGG - chr8_1:20180856-20180875 None:intergenic 15.0%
!!! TTTTCTTTACAAATATTTTG+TGG + chr8_1:20180869-20180888 Msa1184440:intron 15.0%
!!! GAAAGTTTAATAATTTTACT+TGG + chr8_1:20181138-20181157 Msa1184440:intron 15.0%
!!! ACTAGTATATAAATTAGTTT+AGG + chr8_1:20181335-20181354 Msa1184440:intron 15.0%
!!! AGGAGATTTTTTTTTTTTTT+TGG + chr8_1:20181534-20181553 Msa1184440:intron 15.0%
!!! GATTTTTTTTTTTTTTTGGA+AGG + chr8_1:20181538-20181557 Msa1184440:intron 15.0%
!!! AAACATTTTTATTTTATTGC+GGG + chr8_1:20181919-20181938 Msa1184440:intron 15.0%
!! AATAATCATTCACAAATTTA+AGG + chr8_1:20182004-20182023 Msa1184440:intron 15.0%
!!! TTTTTTTCATATAATACATG+AGG + chr8_1:20182717-20182736 Msa1184440:three_prime_UTR 15.0%
!! TAAAATCCTAATTTGGATTT+GGG - chr8_1:20177069-20177088 None:intergenic 20.0%
!! ATAAAATCCTAATTTGGATT+TGG - chr8_1:20177070-20177089 None:intergenic 20.0%
!!! GGATTTTATTTCATAAAAGA+AGG + chr8_1:20177081-20177100 Msa1184440:five_prime_UTR 20.0%
!! TGATTAATATACTAATGATG+TGG + chr8_1:20177758-20177777 Msa1184440:intron 20.0%
!!! TGAAATTGGCAATTATTTTT+TGG - chr8_1:20177907-20177926 None:intergenic 20.0%
!!! TTTTATTTGAAGACTCATAT+AGG + chr8_1:20178085-20178104 Msa1184440:intron 20.0%
!! TTTATTTGAAGACTCATATA+GGG + chr8_1:20178086-20178105 Msa1184440:intron 20.0%
!!! TGATTTGTATGATGATATAT+AGG + chr8_1:20178137-20178156 Msa1184440:intron 20.0%
!! GATTATCACGTATAATATAT+AGG + chr8_1:20178416-20178435 Msa1184440:intron 20.0%
!!! TGGACTTTAAAATTATATCA+AGG + chr8_1:20178529-20178548 Msa1184440:intron 20.0%
!!! TTTTTTTATAACTCTCCAAA+GGG - chr8_1:20178562-20178581 None:intergenic 20.0%
!!! ATTTTTTTATAACTCTCCAA+AGG - chr8_1:20178563-20178582 None:intergenic 20.0%
!!! TCGTTTTTTATCAATAAACT+TGG - chr8_1:20178819-20178838 None:intergenic 20.0%
!!! TTTTGTTTTGTGATATTTGT+AGG - chr8_1:20178849-20178868 None:intergenic 20.0%
!!! TATAAATTCAAACACTGATT+TGG - chr8_1:20178915-20178934 None:intergenic 20.0%
!! ATCAGTGTTTGAATTTATAA+TGG + chr8_1:20178916-20178935 Msa1184440:intron 20.0%
!!! GTTGTTTTATTTTCTTTGTT+TGG - chr8_1:20178945-20178964 None:intergenic 20.0%
!! ATATTATATAATCGAGTACA+TGG + chr8_1:20179134-20179153 Msa1184440:intron 20.0%
!! ATATATATGTATATCTCTAG+TGG + chr8_1:20179467-20179486 Msa1184440:intron 20.0%
!! AATGAATGTAGGAAAATTAT+AGG + chr8_1:20179808-20179827 Msa1184440:intron 20.0%
!! AATATGACATGATAATAGTA+AGG + chr8_1:20179897-20179916 Msa1184440:intron 20.0%
!! AAAAGTGATCAATAGATAAT+GGG - chr8_1:20180396-20180415 None:intergenic 20.0%
!! TAAAAGTGATCAATAGATAA+TGG - chr8_1:20180397-20180416 None:intergenic 20.0%
!!! ATCTATTGATCACTTTTATT+AGG + chr8_1:20180399-20180418 Msa1184440:intron 20.0%
!!! TCTATTGATCACTTTTATTA+GGG + chr8_1:20180400-20180419 Msa1184440:intron 20.0%
!!! GGTTTTGGTTTTAATAAAAA+CGG - chr8_1:20180459-20180478 None:intergenic 20.0%
!!! GAATTACTTCTAATATTTTG+TGG - chr8_1:20180498-20180517 None:intergenic 20.0%
!!! ACAATTTTGACATCAAATTT+TGG + chr8_1:20180624-20180643 Msa1184440:intron 20.0%
!! ATCTTACTATACTATACTAT+TGG - chr8_1:20180985-20181004 None:intergenic 20.0%
!!! CTCTTTTATTTTTTCGTAAT+TGG - chr8_1:20181075-20181094 None:intergenic 20.0%
!! TATTAAACCAAAGAAAATGT+TGG + chr8_1:20181213-20181232 Msa1184440:intron 20.0%
!!! AAATTTACCAACATTTTCTT+TGG - chr8_1:20181223-20181242 None:intergenic 20.0%
!! AATGTAAACAAATTGACTAT+TGG + chr8_1:20181387-20181406 Msa1184440:intron 20.0%
!! AATGTAAACAAATTGACTAT+TGG + chr8_1:20181387-20181406 Msa1184440:intron 20.0%
!! TCCATTATTTACCTATTTAT+AGG + chr8_1:20182274-20182293 Msa1184440:intron 20.0%
! TACAAATTTATGACATGTGA+GGG - chr8_1:20176972-20176991 None:intergenic 25.0%
! ATACAAATTTATGACATGTG+AGG - chr8_1:20176973-20176992 None:intergenic 25.0%
! ATTTCATAAAAGAAGGGATA+TGG + chr8_1:20177088-20177107 Msa1184440:exon 25.0%
!!! ACTTTTGTGATTTTTTGATC+AGG + chr8_1:20177802-20177821 Msa1184440:intron 25.0%
!!! ACTAATTTGAAGCCTTTTTT+TGG + chr8_1:20178044-20178063 Msa1184440:intron 25.0%
! TTATTTGAAGACTCATATAG+GGG + chr8_1:20178087-20178106 Msa1184440:intron 25.0%
! TTTGTATGATGATATATAGG+TGG + chr8_1:20178140-20178159 Msa1184440:intron 25.0%
! ATTATAATTACCTTGGATGA+AGG - chr8_1:20178312-20178331 None:intergenic 25.0%
! TGAAGAGATTATAATTACCT+TGG - chr8_1:20178319-20178338 None:intergenic 25.0%
! AAAATGAAATCATTTCCCTT+TGG + chr8_1:20178578-20178597 Msa1184440:intron 25.0%
!!! TTTTTTCTTAACTCTCCAAA+GGG - chr8_1:20178596-20178615 None:intergenic 25.0%
!!! ATTTTTTCTTAACTCTCCAA+AGG - chr8_1:20178597-20178616 None:intergenic 25.0%
!!! AACATTGATTTGTTCAAAGT+TGG + chr8_1:20178710-20178729 Msa1184440:intron 25.0%
!! TATTGTTTTCGATCTATATG+AGG - chr8_1:20178740-20178759 None:intergenic 25.0%
! TTCAAAGTCGCTAAAATAAA+AGG + chr8_1:20178765-20178784 Msa1184440:intron 25.0%
! TCAAAGTCGCTAAAATAAAA+GGG + chr8_1:20178766-20178785 Msa1184440:intron 25.0%
! AAATAAAAGGGATAAACATG+TGG + chr8_1:20178778-20178797 Msa1184440:intron 25.0%
! TGATTATTTCGTGTAGTATA+AGG + chr8_1:20179040-20179059 Msa1184440:intron 25.0%
! GATTATTTCGTGTAGTATAA+GGG + chr8_1:20179041-20179060 Msa1184440:intron 25.0%
! TATTTGAAAACCTAAGTTTC+AGG + chr8_1:20179094-20179113 Msa1184440:intron 25.0%
!!! TGTCTTTTTTGGGAAAAATA+AGG + chr8_1:20179197-20179216 Msa1184440:intron 25.0%
!!! GTCTTTTTTGGGAAAAATAA+GGG + chr8_1:20179198-20179217 Msa1184440:intron 25.0%
! AATTTCATTAGTTAAACGCT+AGG - chr8_1:20179602-20179621 None:intergenic 25.0%
!! ATGTATGTTCATTAGTGTTT+TGG + chr8_1:20179713-20179732 Msa1184440:intron 25.0%
!! TGTATGTTCATTAGTGTTTT+GGG + chr8_1:20179714-20179733 Msa1184440:intron 25.0%
! AGAGAGATAAAAAGAAAATG+AGG + chr8_1:20179780-20179799 Msa1184440:intron 25.0%
! TGATAATTTAAGAATCCATG+AGG - chr8_1:20179845-20179864 None:intergenic 25.0%
! AAGATATATATTGTCATCGA+TGG - chr8_1:20179955-20179974 None:intergenic 25.0%
! AAACAATGCCTATATTTCTT+AGG + chr8_1:20180033-20180052 Msa1184440:intron 25.0%
!! AAATGATGTTTTATCAAGCT+TGG - chr8_1:20180926-20180945 None:intergenic 25.0%
! TGATAAAACATCATTTAGTG+AGG + chr8_1:20180930-20180949 Msa1184440:intron 25.0%
! GGAATGGAACTAATAATTAA+GGG + chr8_1:20181031-20181050 Msa1184440:intron 25.0%
! ATTAAGGGAAAGAAAAACAT+TGG + chr8_1:20181046-20181065 Msa1184440:intron 25.0%
! TATTAAACTTTCTTCCTTGA+AGG - chr8_1:20181130-20181149 None:intergenic 25.0%
! CATGTGAATGAGTAAAATAT+TGG - chr8_1:20181648-20181667 None:intergenic 25.0%
!!! TGGGCTATAATTTTTTTTTG+AGG - chr8_1:20181741-20181760 None:intergenic 25.0%
!!! TTTGTTTTGGGTCATATTAT+AGG - chr8_1:20182080-20182099 None:intergenic 25.0%
! CTTATATATCTAGTGTCTTA+AGG - chr8_1:20182238-20182257 None:intergenic 25.0%
! GCCTATAAATAGGTAAATAA+TGG - chr8_1:20182278-20182297 None:intergenic 25.0%
!! TTCAATCTTTGTTTCAAAGA+TGG + chr8_1:20182785-20182804 Msa1184440:three_prime_UTR 25.0%
!!! AAGAGTTTTATTCTCTCCAA+TGG - chr8_1:20176925-20176944 None:intergenic 30.0%
AGATATCCCAAATCCAAATT+AGG + chr8_1:20177060-20177079 Msa1184440:five_prime_UTR 30.0%
GAAACTTGGAGATCATAATT+GGG - chr8_1:20177131-20177150 None:intergenic 30.0%
TGAAACTTGGAGATCATAAT+TGG - chr8_1:20177132-20177151 None:intergenic 30.0%
AGGTATTTGTGAATGAAACT+TGG - chr8_1:20177145-20177164 None:intergenic 30.0%
ATTGAACAAAACCCATTTCA+TGG - chr8_1:20177178-20177197 None:intergenic 30.0%
CTTTCTCAATCTCTAAATTC+CGG + chr8_1:20177257-20177276 Msa1184440:CDS 30.0%
AAGATCATTATGGCTAAATC+CGG - chr8_1:20177339-20177358 None:intergenic 30.0%
TAGTAGTGACAAGATCATTA+TGG - chr8_1:20177349-20177368 None:intergenic 30.0%
! TTCTGTCCTTTTCAATGTTA+GGG + chr8_1:20177699-20177718 Msa1184440:intron 30.0%
ACAATACCCTAACATTGAAA+AGG - chr8_1:20177708-20177727 None:intergenic 30.0%
AGGAGTAAAATTCTCACTTA+TGG - chr8_1:20178662-20178681 None:intergenic 30.0%
! GAGAATTTTACTCCTATCTT+TGG + chr8_1:20178667-20178686 Msa1184440:intron 30.0%
AAGAGAAAAATGCCAAAGAT+AGG - chr8_1:20178682-20178701 None:intergenic 30.0%
TTGTTCACCATATATTGATG+CGG - chr8_1:20178969-20178988 None:intergenic 30.0%
! AACATTTTCACCTGAAACTT+AGG - chr8_1:20179107-20179126 None:intergenic 30.0%
!!! TGAAGGTAGAATGTCTTTTT+TGG + chr8_1:20179186-20179205 Msa1184440:intron 30.0%
!!! GAAGGTAGAATGTCTTTTTT+GGG + chr8_1:20179187-20179206 Msa1184440:intron 30.0%
! GTTTGGTTTCAAAATGTTTG+AGG - chr8_1:20179255-20179274 None:intergenic 30.0%
ACATTATGTACATAGGACAA+AGG - chr8_1:20179549-20179568 None:intergenic 30.0%
TTTGGGAACATTATGTACAT+AGG - chr8_1:20179556-20179575 None:intergenic 30.0%
AGGATTAAGTGAAAGAAGTT+GGG - chr8_1:20179582-20179601 None:intergenic 30.0%
TAGGATTAAGTGAAAGAAGT+TGG - chr8_1:20179583-20179602 None:intergenic 30.0%
AAGGTGCATGTATATATTTG+GGG - chr8_1:20179757-20179776 None:intergenic 30.0%
CAAGGTGCATGTATATATTT+GGG - chr8_1:20179758-20179777 None:intergenic 30.0%
TCAAGGTGCATGTATATATT+TGG - chr8_1:20179759-20179778 None:intergenic 30.0%
! TTCTTTTTATCTCTCTCTCA+AGG - chr8_1:20179776-20179795 None:intergenic 30.0%
!!! ATGAGGTTTTGAATGAATGT+AGG + chr8_1:20179797-20179816 Msa1184440:intron 30.0%
TAAGAATCCATGAGGATATT+TGG - chr8_1:20179837-20179856 None:intergenic 30.0%
TGATAATAGTAAGGTGTGAT+AGG + chr8_1:20179906-20179925 Msa1184440:intron 30.0%
GTGATACTCCTAAGAAATAT+AGG - chr8_1:20180044-20180063 None:intergenic 30.0%
GAAATTAGAACACACTTACT+TGG + chr8_1:20180132-20180151 Msa1184440:intron 30.0%
!! CAAACTTAGGGTTTTTCAAT+GGG + chr8_1:20180218-20180237 Msa1184440:intron 30.0%
!! AAACTTAGGGTTTTTCAATG+GGG + chr8_1:20180219-20180238 Msa1184440:intron 30.0%
TTGTACGGTTATAAATAGAG+AGG - chr8_1:20180294-20180313 None:intergenic 30.0%
TTTGTGTAGAAACATAGTGT+AGG - chr8_1:20180353-20180372 None:intergenic 30.0%
!!! TCAATAGATAATGGGCTTTT+GGG - chr8_1:20180388-20180407 None:intergenic 30.0%
!!! ATCAATAGATAATGGGCTTT+TGG - chr8_1:20180389-20180408 None:intergenic 30.0%
CCTTGACAACATATTTGAAT+TGG - chr8_1:20180658-20180677 None:intergenic 30.0%
CCAATTCAAATATGTTGTCA+AGG + chr8_1:20180655-20180674 Msa1184440:intron 30.0%
!!! TAAGTCGGGTTTTAAAACTA+TGG + chr8_1:20180751-20180770 Msa1184440:intron 30.0%
ACATCATTTAGTGAGGATTT+CGG + chr8_1:20180937-20180956 Msa1184440:intron 30.0%
AACCAAAGTTACTTAGACTA+AGG + chr8_1:20181008-20181027 Msa1184440:intron 30.0%
ACCAAAGTTACTTAGACTAA+GGG + chr8_1:20181009-20181028 Msa1184440:intron 30.0%
GGGAATGGAACTAATAATTA+AGG + chr8_1:20181030-20181049 Msa1184440:intron 30.0%
CTTAATGAACCAATACAAAG+TGG + chr8_1:20181166-20181185 Msa1184440:intron 30.0%
TTCTAACCACAATCTTGTAA+TGG - chr8_1:20181263-20181282 None:intergenic 30.0%
TAACACTTAGCAGTACTATT+GGG - chr8_1:20181760-20181779 None:intergenic 30.0%
AAAATACTACCATATACCCA+AGG - chr8_1:20181817-20181836 None:intergenic 30.0%
! TATGGTAGTATTTTCACCTT+TGG + chr8_1:20181823-20181842 Msa1184440:intron 30.0%
! ATGGTAGTATTTTCACCTTT+GGG + chr8_1:20181824-20181843 Msa1184440:intron 30.0%
ATTATTAAGTCCTACATCCA+GGG - chr8_1:20181990-20182009 None:intergenic 30.0%
AAATGTTCAATGACCAAAAG+AGG + chr8_1:20182187-20182206 Msa1184440:intron 30.0%
!!! TAAGGTTTTGAATCGAGATA+TGG - chr8_1:20182220-20182239 None:intergenic 30.0%
TGAGTGATTAAATATGTGAG+TGG - chr8_1:20182315-20182334 None:intergenic 30.0%
AAAATCTTACCGCACATATT+GGG - chr8_1:20182347-20182366 None:intergenic 30.0%
TAAAATCTTACCGCACATAT+TGG - chr8_1:20182348-20182367 None:intergenic 30.0%
! TTTTACTGAAACGACATTGT+TGG - chr8_1:20182664-20182683 None:intergenic 30.0%
!! CATTCCCTTTAGAATTCCAT+TGG + chr8_1:20176906-20176925 Msa1184440:five_prime_UTR 35.0%
CTCTCCAATGGAATTCTAAA+GGG - chr8_1:20176913-20176932 None:intergenic 35.0%
TCTCTCCAATGGAATTCTAA+AGG - chr8_1:20176914-20176933 None:intergenic 35.0%
! GAGGGTTTTTGTGTATAGTT+TGG - chr8_1:20176954-20176973 None:intergenic 35.0%
CATAAAAGAAGGGATATGGA+AGG + chr8_1:20177092-20177111 Msa1184440:exon 35.0%
TCTCAAGCTATCCATGAAAT+GGG + chr8_1:20177164-20177183 Msa1184440:CDS 35.0%
TTGAGAAAGTTGAGAAGGTT+GGG - chr8_1:20177246-20177265 None:intergenic 35.0%
ATTGAGAAAGTTGAGAAGGT+TGG - chr8_1:20177247-20177266 None:intergenic 35.0%
AGAGATTGAGAAAGTTGAGA+AGG - chr8_1:20177251-20177270 None:intergenic 35.0%
! GTTCTGTCCTTTTCAATGTT+AGG + chr8_1:20177698-20177717 Msa1184440:intron 35.0%
GATAGAGAGAGAAAAGAAGA+AGG - chr8_1:20177943-20177962 None:intergenic 35.0%
GTATGATGATATATAGGTGG+AGG + chr8_1:20178143-20178162 Msa1184440:intron 35.0%
!! TGCTTGATGATGGTTACAAA+TGG + chr8_1:20178254-20178273 Msa1184440:CDS 35.0%
!! TTGATGATGGTTACAAATGG+AGG + chr8_1:20178257-20178276 Msa1184440:CDS 35.0%
! ACTTAACTTTTGTTCAACCG+CGG - chr8_1:20178452-20178471 None:intergenic 35.0%
TATCAAGGTTCATTTCCCTT+TGG + chr8_1:20178544-20178563 Msa1184440:intron 35.0%
!! TACATCAAAGGCATTATACC+CGG + chr8_1:20179158-20179177 Msa1184440:intron 35.0%
! TTTGGGAAAAATAAGGGTGT+CGG + chr8_1:20179204-20179223 Msa1184440:intron 35.0%
CTGACTATAGTGAAGATTGA+TGG + chr8_1:20179368-20179387 Msa1184440:intron 35.0%
GTGCTCTATAGTCAAAACTA+TGG - chr8_1:20179502-20179521 None:intergenic 35.0%
TTGACTATAGAGCACACTAT+AGG + chr8_1:20179507-20179526 Msa1184440:intron 35.0%
TGACTATAGAGCACACTATA+GGG + chr8_1:20179508-20179527 Msa1184440:intron 35.0%
! TGAAAGAAGTTGGGTGTTTT+GGG - chr8_1:20179573-20179592 None:intergenic 35.0%
GAAGACTTTGTCTTCAATCT+CGG - chr8_1:20180179-20180198 None:intergenic 35.0%
TTTCACATGCTCCAAACTTA+GGG + chr8_1:20180206-20180225 Msa1184440:intron 35.0%
CCATTGAAAAACCCTAAGTT+TGG - chr8_1:20180220-20180239 None:intergenic 35.0%
!! CCAAACTTAGGGTTTTTCAA+TGG + chr8_1:20180217-20180236 Msa1184440:intron 35.0%
ATTTATAACCGTACAACCCT+AGG + chr8_1:20180298-20180317 Msa1184440:intron 35.0%
!! TGATCCATTTGATGATGCTT+AGG - chr8_1:20180426-20180445 None:intergenic 35.0%
!!! CTGCAATCAATTGTTGGTTT+TGG - chr8_1:20180474-20180493 None:intergenic 35.0%
ATAATTTCGACTAGGCTCAA+TGG - chr8_1:20180547-20180566 None:intergenic 35.0%
TGAGCCTAGTCGAAATTATA+TGG + chr8_1:20180548-20180567 Msa1184440:intron 35.0%
AATTTCAAGGTCCATGTGAT+TGG + chr8_1:20180717-20180736 Msa1184440:intron 35.0%
!! GGCTTTGAAGCAAATGTATT+AGG + chr8_1:20180890-20180909 Msa1184440:intron 35.0%
ATTTAGTGAGGATTTCGGAT+AGG + chr8_1:20180942-20180961 Msa1184440:intron 35.0%
CCAAAGTTACTTAGACTAAG+GGG + chr8_1:20181010-20181029 Msa1184440:intron 35.0%
TGTTGATATTGTTGCCTTCA+AGG + chr8_1:20181113-20181132 Msa1184440:intron 35.0%
TAACCACAATCTTGTAATGG+TGG - chr8_1:20181260-20181279 None:intergenic 35.0%
TACAAGATTGTGGTTAGAAG+TGG + chr8_1:20181264-20181283 Msa1184440:intron 35.0%
TTGTGGTTAGAAGTGGAATT+AGG + chr8_1:20181271-20181290 Msa1184440:intron 35.0%
! TACATTTTCAAACACCTCAC+CGG - chr8_1:20181373-20181392 None:intergenic 35.0%
AGTAACAATCGAGAGAACTT+CGG + chr8_1:20181428-20181447 Msa1184440:intron 35.0%
! CGAGAGAACTTTTTATGAAG+AGG + chr8_1:20181514-20181533 Msa1184440:intron 35.0%
TACTCATTCACATGTGATGT+AGG + chr8_1:20181654-20181673 Msa1184440:intron 35.0%
ATTCACATGTGATGTAGGTA+GGG + chr8_1:20181659-20181678 Msa1184440:intron 35.0%
!!! TTTTTTGAGGTTCATGCCTT+GGG - chr8_1:20181728-20181747 None:intergenic 35.0%
!!! TTTTTTTGAGGTTCATGCCT+TGG - chr8_1:20181729-20181748 None:intergenic 35.0%
CTAACACTTAGCAGTACTAT+TGG - chr8_1:20181761-20181780 None:intergenic 35.0%
CAATAGTACTGCTAAGTGTT+AGG + chr8_1:20181759-20181778 Msa1184440:intron 35.0%
! TGTTAGGTGAGTGTGTTTTT+CGG + chr8_1:20181775-20181794 Msa1184440:intron 35.0%
!! TACAAGGTGTCGTATATAAG+CGG - chr8_1:20181854-20181873 None:intergenic 35.0%
TTGGGTCTGTAGATGAAAAA+AGG - chr8_1:20181945-20181964 None:intergenic 35.0%
GATTATTAAGTCCTACATCC+AGG - chr8_1:20181991-20182010 None:intergenic 35.0%
TTGTGTTTGATGTTTCTCTC+AGG - chr8_1:20182169-20182188 None:intergenic 35.0%
! CATTTGAAACCCAATATGTG+CGG + chr8_1:20182335-20182354 Msa1184440:intron 35.0%
ATGGTGATAACCACTTATGA+AGG + chr8_1:20182570-20182589 Msa1184440:CDS 35.0%
ATTATGTCTGCCTTCATAAG+TGG - chr8_1:20182583-20182602 None:intergenic 35.0%
GACATTGTTGGATCAAAAAG+AGG - chr8_1:20182652-20182671 None:intergenic 35.0%
CATTTCATGGATAGCTTGAG+AGG - chr8_1:20177165-20177184 None:intergenic 40.0%
CTCTCAAGCTATCCATGAAA+TGG + chr8_1:20177163-20177182 Msa1184440:CDS 40.0%
TTGTCACTACTAGAACTCCT+TGG + chr8_1:20177357-20177376 Msa1184440:CDS 40.0%
TTCTCATCACTCACAGCTTT+GGG - chr8_1:20177842-20177861 None:intergenic 40.0%
ATTCTCATCACTCACAGCTT+TGG - chr8_1:20177843-20177862 None:intergenic 40.0%
TGCACTGGAAATACTAGTGA+TGG + chr8_1:20177863-20177882 Msa1184440:CDS 40.0%
ATGATATATAGGTGGAGGAG+TGG + chr8_1:20178148-20178167 Msa1184440:intron 40.0%
CTTGTCTGGAAACAAAACCT+TGG - chr8_1:20178220-20178239 None:intergenic 40.0%
CATCTACATCACTTCTTGTC+TGG - chr8_1:20178234-20178253 None:intergenic 40.0%
GATGTAGATGTGCTTGATGA+TGG + chr8_1:20178244-20178263 Msa1184440:CDS 40.0%
GGTTACAAATGGAGGAAGTA+TGG + chr8_1:20178265-20178284 Msa1184440:CDS 40.0%
TCAAGAATAGCCTTCATCCA+AGG + chr8_1:20178299-20178318 Msa1184440:CDS 40.0%
ATATAGGTTAGTACTAGCCG+CGG + chr8_1:20178432-20178451 Msa1184440:intron 40.0%
CGTTTCAACGAGGTTCAATT+CGG - chr8_1:20178500-20178519 None:intergenic 40.0%
AACTAACGATCGTTTCAACG+AGG - chr8_1:20178510-20178529 None:intergenic 40.0%
TCGTTGAAACGATCGTTAGT+TGG + chr8_1:20178509-20178528 Msa1184440:intron 40.0%
! GTTTAGAATTCAGACGTCTC+TGG + chr8_1:20178872-20178891 Msa1184440:intron 40.0%
AACAACGCCGCATCAATATA+TGG + chr8_1:20178959-20178978 Msa1184440:intron 40.0%
AACAACACCTACCTCTTTGA+AGG + chr8_1:20178989-20179008 Msa1184440:intron 40.0%
TTCTCCTTCATCCTTCAAAG+AGG - chr8_1:20179003-20179022 None:intergenic 40.0%
ACATTCTACCTTCATTCCTC+CGG - chr8_1:20179180-20179199 None:intergenic 40.0%
TCTCTCTAGTTGTGAGTGTT+TGG - chr8_1:20179272-20179291 None:intergenic 40.0%
TCTCTCCAGCTAAAACTGAA+AGG + chr8_1:20179307-20179326 Msa1184440:intron 40.0%
TCCAGCTAAAACTGAAAGGA+AGG + chr8_1:20179311-20179330 Msa1184440:intron 40.0%
!! TCCTTCCTTTCAGTTTTAGC+TGG - chr8_1:20179315-20179334 None:intergenic 40.0%
TGATGGTACAGACTGAACAT+TGG + chr8_1:20179385-20179404 Msa1184440:intron 40.0%
GATGGTACAGACTGAACATT+GGG + chr8_1:20179386-20179405 Msa1184440:intron 40.0%
ATGTACATAGGACAAAGGAG+TGG - chr8_1:20179544-20179563 None:intergenic 40.0%
! GTGAAAGAAGTTGGGTGTTT+TGG - chr8_1:20179574-20179593 None:intergenic 40.0%
ATTAGTGCACATCATGCACA+CGG - chr8_1:20179647-20179666 None:intergenic 40.0%
GTGCATGTATATATTTGGGG+TGG - chr8_1:20179754-20179773 None:intergenic 40.0%
TAGGTGTCCAAATATCCTCA+TGG + chr8_1:20179827-20179846 Msa1184440:intron 40.0%
ACACACTTACTTGGAAACCA+TGG + chr8_1:20180141-20180160 Msa1184440:intron 40.0%
! CTAAGTTTGGAGCATGTGAA+AGG - chr8_1:20180207-20180226 None:intergenic 40.0%
CTTTCACATGCTCCAAACTT+AGG + chr8_1:20180205-20180224 Msa1184440:intron 40.0%
CTGACTATTCTGCTCATTAG+CGG - chr8_1:20180249-20180268 None:intergenic 40.0%
AATAGTCAGAGTGATGGCAA+AGG + chr8_1:20180260-20180279 Msa1184440:intron 40.0%
ATAGTCAGAGTGATGGCAAA+GGG + chr8_1:20180261-20180280 Msa1184440:intron 40.0%
CGGTTATAAATAGAGAGGCT+AGG - chr8_1:20180289-20180308 None:intergenic 40.0%
CGGACCATATAATTTCGACT+AGG - chr8_1:20180555-20180574 None:intergenic 40.0%
TTGGTCAGATCAGTCTAAGT+CGG + chr8_1:20180736-20180755 Msa1184440:intron 40.0%
CAAATGTATTAGGCTAGACG+TGG + chr8_1:20180900-20180919 Msa1184440:intron 40.0%
CCCCTTAGTCTAAGTAACTT+TGG - chr8_1:20181013-20181032 None:intergenic 40.0%
GTTACTTAGACTAAGGGGAA+TGG + chr8_1:20181015-20181034 Msa1184440:intron 40.0%
GCACTTCAACCACTTTGTAT+TGG - chr8_1:20181178-20181197 None:intergenic 40.0%
AGACCACCATTACAAGATTG+TGG + chr8_1:20181254-20181273 Msa1184440:intron 40.0%
GTTTAGGAACATTAACGTGC+CGG + chr8_1:20181351-20181370 Msa1184440:intron 40.0%
! TTCTCTCGATTGTTACTTGC+TGG - chr8_1:20181425-20181444 None:intergenic 40.0%
! TTCTCTCGATTGTTACTTGC+TGG - chr8_1:20181425-20181444 None:intergenic 40.0%
CATTCACATGTGATGTAGGT+AGG + chr8_1:20181658-20181677 Msa1184440:intron 40.0%
TGCAAACCACTAAATGGAAC+TGG + chr8_1:20181697-20181716 Msa1184440:intron 40.0%
GCAAACCACTAAATGGAACT+GGG + chr8_1:20181698-20181717 Msa1184440:intron 40.0%
!!! TTTTTGAGGTTCATGCCTTG+GGG - chr8_1:20181727-20181746 None:intergenic 40.0%
! TTTGAGGTTCCTTGGGTATA+TGG + chr8_1:20181805-20181824 Msa1184440:intron 40.0%
TATATAAGCGGTACACCCAA+AGG - chr8_1:20181842-20181861 None:intergenic 40.0%
!!! GTGGGAGTGGATTTTGTTTT+GGG - chr8_1:20182092-20182111 None:intergenic 40.0%
!! AGTGGGAGTGGATTTTGTTT+TGG - chr8_1:20182093-20182112 None:intergenic 40.0%
AACAAGTGATATCAAAGCCC+TGG - chr8_1:20182132-20182151 None:intergenic 40.0%
! AGGGCTTTGATATCACTTGT+TGG + chr8_1:20182131-20182150 Msa1184440:intron 40.0%
! GGGCTTTGATATCACTTGTT+GGG + chr8_1:20182132-20182151 Msa1184440:intron 40.0%
! GGCTTTGATATCACTTGTTG+GGG + chr8_1:20182133-20182152 Msa1184440:intron 40.0%
GCTGCACACATAACAATTGT+CGG + chr8_1:20182508-20182527 Msa1184440:CDS 40.0%
CTGCACACATAACAATTGTC+GGG + chr8_1:20182509-20182528 Msa1184440:CDS 40.0%
ACTCTCAGAAGATTGTCGTA+TGG + chr8_1:20182551-20182570 Msa1184440:CDS 40.0%
GAAGAATTAGAGTCGTCACA+AGG - chr8_1:20182612-20182631 None:intergenic 40.0%
GAAGGTTGGGATTGTGTAGA+GGG - chr8_1:20177233-20177252 None:intergenic 45.0%
AGAAGGTTGGGATTGTGTAG+AGG - chr8_1:20177234-20177253 None:intergenic 45.0%
AACTCCTTGGAACAACGAAC+AGG + chr8_1:20177370-20177389 Msa1184440:CDS 45.0%
GTGAGTGATGAGAATTGCAC+TGG + chr8_1:20177848-20177867 Msa1184440:CDS 45.0%
CTAGTGATGGCAACAACACA+TGG + chr8_1:20177876-20177895 Msa1184440:CDS 45.0%
ATATATAGGTGGAGGAGTGG+AGG + chr8_1:20178151-20178170 Msa1184440:intron 45.0%
CCTTCATCCTTCAAAGAGGT+AGG - chr8_1:20178999-20179018 None:intergenic 45.0%
! CCTACCTCTTTGAAGGATGA+AGG + chr8_1:20178996-20179015 Msa1184440:intron 45.0%
CGAGTACATGGCTACATCAA+AGG + chr8_1:20179146-20179165 Msa1184440:intron 45.0%
!! ATCAAAGGCATTATACCCGG+AGG + chr8_1:20179161-20179180 Msa1184440:intron 45.0%
CATTATACCCGGAGGAATGA+AGG + chr8_1:20179169-20179188 Msa1184440:intron 45.0%
CATTCTACCTTCATTCCTCC+GGG - chr8_1:20179179-20179198 None:intergenic 45.0%
AGGACAAAGGAGTGGAAAGA+GGG - chr8_1:20179536-20179555 None:intergenic 45.0%
TAGGACAAAGGAGTGGAAAG+AGG - chr8_1:20179537-20179556 None:intergenic 45.0%
TGTCATCGATGGTAGTTACG+CGG - chr8_1:20179944-20179963 None:intergenic 45.0%
!! TAGGAGTATCACCAGACACA+TGG + chr8_1:20180052-20180071 Msa1184440:intron 45.0%
!! AGGAGTATCACCAGACACAT+GGG + chr8_1:20180053-20180072 Msa1184440:intron 45.0%
TTCTTGATGTCCCATGTGTC+TGG - chr8_1:20180066-20180085 None:intergenic 45.0%
TACTTGGAAACCATGGTGAC+CGG + chr8_1:20180148-20180167 Msa1184440:intron 45.0%
TTGGAGCATGTGAAAGGCAA+AGG - chr8_1:20180201-20180220 None:intergenic 45.0%
GAGCAGAATAGTCAGAGTGA+TGG + chr8_1:20180254-20180273 Msa1184440:intron 45.0%
TAGTCAGAGTGATGGCAAAG+GGG + chr8_1:20180262-20180281 Msa1184440:intron 45.0%
ATAGTGTAGGCCCAAACACT+AGG - chr8_1:20180340-20180359 None:intergenic 45.0%
AGGGCCTAAGCATCATCAAA+TGG + chr8_1:20180419-20180438 Msa1184440:intron 45.0%
! TGTGGGCTGCAATCAATTGT+TGG - chr8_1:20180480-20180499 None:intergenic 45.0%
GACTGATCTGACCAATCACA+TGG - chr8_1:20180731-20180750 None:intergenic 45.0%
TGGTCAGATCAGTCTAAGTC+GGG + chr8_1:20180737-20180756 Msa1184440:intron 45.0%
!! TAGGTGAGTGTGTTTTTCGG+AGG + chr8_1:20181778-20181797 Msa1184440:intron 45.0%
!! TGAGTGTGTTTTTCGGAGGA+TGG + chr8_1:20181782-20181801 Msa1184440:intron 45.0%
!! GTTTTTCGGAGGATGGTTTG+AGG + chr8_1:20181789-20181808 Msa1184440:intron 45.0%
! AGGATGGTTTGAGGTTCCTT+GGG + chr8_1:20181798-20181817 Msa1184440:intron 45.0%
! ATATGGCGTGTCACCTCTTT+TGG - chr8_1:20182203-20182222 None:intergenic 45.0%
GTGTCGCATCGCCTATAAAT+AGG - chr8_1:20182288-20182307 None:intergenic 45.0%
AGCCACGGTAGTAGTTGTGA+CGG - chr8_1:20177315-20177334 None:intergenic 50.0%
TCCTTGGAACAACGAACAGG+TGG + chr8_1:20177373-20177392 Msa1184440:intron 50.0%
ACCACCTGTTCGTTGTTCCA+AGG - chr8_1:20177377-20177396 None:intergenic 50.0%
AGAAGAGCAAGGCGAAAGTG+AGG + chr8_1:20178179-20178198 Msa1184440:CDS 50.0%
GGAGGAAACTTAGAGAGCCA+AGG + chr8_1:20178200-20178219 Msa1184440:CDS 50.0%
GGACAAAGGAGTGGAAAGAG+GGG - chr8_1:20179535-20179554 None:intergenic 50.0%
GTCTTCAATCTCGGCGAATC+CGG - chr8_1:20180170-20180189 None:intergenic 50.0%
CCAAACACTAGGCCCATGAT+GGG - chr8_1:20180329-20180348 None:intergenic 50.0%
CCATCATGGGCCTAGTGTTT+GGG + chr8_1:20180327-20180346 Msa1184440:intron 50.0%
CAATCGAGAGAACTTCGGTG+AGG + chr8_1:20181433-20181452 Msa1184440:intron 50.0%
ACATGTGATGTAGGTAGGGC+CGG + chr8_1:20181663-20181682 Msa1184440:intron 50.0%
! TTAGTGGTTTGCACACCCCA+AGG - chr8_1:20181690-20181709 None:intergenic 50.0%
GGGGTGTGCAAACCACTAAA+TGG + chr8_1:20181691-20181710 Msa1184440:intron 50.0%
! GAGGATGGTTTGAGGTTCCT+TGG + chr8_1:20181797-20181816 Msa1184440:intron 50.0%
GTTCAGCTTAGTGGAGGAGT+GGG - chr8_1:20182110-20182129 None:intergenic 50.0%
TCCTCCACTAAGCTGAACCA+GGG + chr8_1:20182112-20182131 Msa1184440:intron 50.0%
AAAGCCCTGGTTCAGCTTAG+TGG - chr8_1:20182119-20182138 None:intergenic 50.0%
TGATGTTTCTCTCAGGCCCT+CGG - chr8_1:20182162-20182181 None:intergenic 50.0%
!! TAGTGGCGTTGGTGGTGCTA+CGG - chr8_1:20177283-20177302 None:intergenic 55.0%
AGTAGTTGTGACGGCTGCAC+CGG - chr8_1:20177306-20177325 None:intergenic 55.0%
AGCCGTCACAACTACTACCG+TGG + chr8_1:20177310-20177329 Msa1184440:CDS 55.0%
ACAACTACTACCGTGGCTGC+CGG + chr8_1:20177317-20177336 Msa1184440:CDS 55.0%
ATGGCTAAATCCGGCAGCCA+CGG - chr8_1:20177330-20177349 None:intergenic 55.0%
TGGAGGAGCAGAGAAGAGCA+AGG + chr8_1:20178168-20178187 Msa1184440:CDS 55.0%
AGAGCAAGGCGAAAGTGAGG+AGG + chr8_1:20178182-20178201 Msa1184440:CDS 55.0%
! AACACTAGGCCCATGATGGG+TGG - chr8_1:20180326-20180345 None:intergenic 55.0%
CCCATCATGGGCCTAGTGTT+TGG + chr8_1:20180326-20180345 Msa1184440:intron 55.0%
CCCAAACACTAGGCCCATGA+TGG - chr8_1:20180330-20180349 None:intergenic 55.0%
! GGAACATTAACGTGCCGGTG+AGG + chr8_1:20181356-20181375 Msa1184440:intron 55.0%
GGAGGCCCAGTTCCATTTAG+TGG - chr8_1:20181706-20181725 None:intergenic 55.0%
TTGAGGTTCATGCCTTGGGG+AGG - chr8_1:20181724-20181743 None:intergenic 55.0%
CATCTACAGACCCAAGCCTC+CGG + chr8_1:20181950-20181969 Msa1184440:intron 55.0%
TCCTACGAATCCGGAGGCTT+GGG - chr8_1:20181963-20181982 None:intergenic 55.0%
TTCCTACGAATCCGGAGGCT+TGG - chr8_1:20181964-20181983 None:intergenic 55.0%
CAGGGTCGTTCCTACGAATC+CGG - chr8_1:20181972-20181991 None:intergenic 55.0%
GTAGGAACGACCCTGGATGT+AGG + chr8_1:20181977-20181996 Msa1184440:intron 55.0%
GGTTCAGCTTAGTGGAGGAG+TGG - chr8_1:20182111-20182130 None:intergenic 55.0%
CTCCTCCACTAAGCTGAACC+AGG + chr8_1:20182111-20182130 Msa1184440:intron 55.0%
! ATCACTTGTTGGGGAGTCCG+AGG + chr8_1:20182142-20182161 Msa1184440:intron 55.0%
! TCACTTGTTGGGGAGTCCGA+GGG + chr8_1:20182143-20182162 Msa1184440:intron 55.0%
AGCACCACCAACGCCACTAC+CGG + chr8_1:20177284-20177303 Msa1184440:CDS 60.0%
GGGTGGTGCCTAGGGTTGTA+CGG - chr8_1:20180309-20180328 None:intergenic 60.0%
ACCCTAGGCACCACCCATCA+TGG + chr8_1:20180313-20180332 Msa1184440:intron 60.0%
!! CCCATGATGGGTGGTGCCTA+GGG - chr8_1:20180317-20180336 None:intergenic 60.0%
CCCTAGGCACCACCCATCAT+GGG + chr8_1:20180314-20180333 Msa1184440:intron 60.0%
ATGTAGGTAGGGCCGGACCT+TGG + chr8_1:20181670-20181689 Msa1184440:intron 60.0%
TGTAGGTAGGGCCGGACCTT+GGG + chr8_1:20181671-20181690 Msa1184440:intron 60.0%
GGTTTGCACACCCCAAGGTC+CGG - chr8_1:20181685-20181704 None:intergenic 60.0%
AATGGAACTGGGCCTCCCCA+AGG + chr8_1:20181709-20181728 Msa1184440:intron 60.0%
ACCCAAGCCTCCGGATTCGT+AGG + chr8_1:20181959-20181978 Msa1184440:intron 60.0%
GGTCGTTCCTACGAATCCGG+AGG - chr8_1:20181969-20181988 None:intergenic 60.0%
CGGATTCGTAGGAACGACCC+TGG + chr8_1:20181970-20181989 Msa1184440:intron 60.0%
GCTTAGTGGAGGAGTGGGAG+TGG - chr8_1:20182105-20182124 None:intergenic 60.0%
GCCCTGGTTCAGCTTAGTGG+AGG - chr8_1:20182116-20182135 None:intergenic 60.0%
! TGCACCGGTAGTGGCGTTGG+TGG - chr8_1:20177291-20177310 None:intergenic 65.0%
! TGTGACGGCTGCACCGGTAG+TGG - chr8_1:20177300-20177319 None:intergenic 65.0%
CTCGGCGAATCCGGTCACCA+TGG - chr8_1:20180161-20180180 None:intergenic 65.0%
!! GCCCATGATGGGTGGTGCCT+AGG - chr8_1:20180318-20180337 None:intergenic 65.0%
GTAGGTAGGGCCGGACCTTG+GGG + chr8_1:20181672-20181691 Msa1184440:intron 65.0%
!! GGCGTTGGTGGTGCTACGGC+CGG - chr8_1:20177279-20177298 None:intergenic 70.0%
! GGCTGCACCGGTAGTGGCGT+TGG - chr8_1:20177294-20177313 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 20176875 20182842 20176875 ID=Msa1184440;Name=Msa1184440
chr8_1 mRNA 20176875 20182842 20176875 ID=Msa1184440-mRNA-1;Parent=Msa1184440;Name=Msa1184440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=232|1|1|1|0.66|0.75|4|183|227
chr8_1 exon 20176875 20177391 20176875 ID=Msa1184440-mRNA-1:exon:7788;Parent=Msa1184440-mRNA-1
chr8_1 exon 20177824 20177897 20177824 ID=Msa1184440-mRNA-1:exon:7789;Parent=Msa1184440-mRNA-1
chr8_1 exon 20178159 20178320 20178159 ID=Msa1184440-mRNA-1:exon:7790;Parent=Msa1184440-mRNA-1
chr8_1 exon 20182497 20182842 20182497 ID=Msa1184440-mRNA-1:exon:7791;Parent=Msa1184440-mRNA-1
chr8_1 five_prime_UTR 20176875 20177106 20176875 ID=Msa1184440-mRNA-1:five_prime_utr;Parent=Msa1184440-mRNA-1
chr8_1 CDS 20177107 20177391 20177107 ID=Msa1184440-mRNA-1:cds;Parent=Msa1184440-mRNA-1
chr8_1 CDS 20177824 20177897 20177824 ID=Msa1184440-mRNA-1:cds;Parent=Msa1184440-mRNA-1
chr8_1 CDS 20178159 20178320 20178159 ID=Msa1184440-mRNA-1:cds;Parent=Msa1184440-mRNA-1
chr8_1 CDS 20182497 20182659 20182497 ID=Msa1184440-mRNA-1:cds;Parent=Msa1184440-mRNA-1
chr8_1 three_prime_UTR 20182660 20182842 20182660 ID=Msa1184440-mRNA-1:three_prime_utr;Parent=Msa1184440-mRNA-1
Gene Sequence

>Msa1184440

ATGGAAGGAGAAAGAGATGTTCCCAATTATGATCTCCAAGTTTCATTCACAAATACCTCTCAAGCTATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCTTGTCACCCTCTACACAATCCCAACCTTCTCAACTTTCTCAATCTCTAAATTCCGGCCGTAGCACCACCAACGCCACTACCGGTGCAGCCGTCACAACTACTACCGTGGCTGCCGGATTTAGCCATAATGATCTTGTCACTACTAGAACTCCTTGGAACAACGAACAGGTGAGAACTCTAGATCCCAAAGCTGTGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGAGCAGAGAAGAGCAAGGCGAAAGTGAGGAGGAAACTTAGAGAGCCAAGGTTTTGTTTCCAGACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTATCGCTGCACACATAACAATTGTCGGGTAAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTGATAACCACTTATGAAGGCAGACATAATCACTCTCCTTGTGACGACTCTAATTCTTCTGAACACGAATGTTTTACCTCTTTTTGA
Protein sequence

>Msa1184440

MEGERDVPNYDLQVSFTNTSQAIHEMGFVQFEENQVLSFLSPSTQSQPSQLSQSLNSGRSTTNATTGAAVTTTTVAAGFSHNDLVTTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGAEKSKAKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF*