AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1229120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229120 MtrunA17_Chr8g0335811 95.595 227 4 1 1 221 1 227 3.55e-163 449
Msa1229120 MtrunA17_Chr3g0129361 79.762 84 17 0 131 214 127 210 1.71e-45 150
Msa1229120 MtrunA17_Chr8g0383351 80.000 85 16 1 131 214 142 226 4.34e-44 147
Msa1229120 MtrunA17_Chr5g0432161 60.870 92 34 1 115 204 386 477 8.84e-34 127
Msa1229120 MtrunA17_Chr5g0432161 59.649 57 22 1 148 204 244 299 7.44e-16 75.9
Msa1229120 MtrunA17_Chr7g0248721 64.286 84 28 2 125 208 118 199 1.21e-33 120
Msa1229120 MtrunA17_Chr5g0418781 66.265 83 28 0 122 204 98 180 1.62e-33 121
Msa1229120 MtrunA17_Chr2g0294231 71.233 73 21 0 132 204 187 259 1.26e-31 118
Msa1229120 MtrunA17_Chr3g0079691 63.529 85 29 1 120 204 469 551 3.98e-31 120
Msa1229120 MtrunA17_Chr3g0079691 61.404 57 21 1 148 204 280 335 1.11e-17 81.3
Msa1229120 MtrunA17_Chr7g0218081 63.636 77 28 0 128 204 390 466 4.80e-31 119
Msa1229120 MtrunA17_Chr7g0218081 63.158 57 20 1 148 204 228 283 1.04e-18 84.0
Msa1229120 MtrunA17_Chr3g0106491 58.696 92 36 1 115 204 330 421 6.78e-31 118
Msa1229120 MtrunA17_Chr3g0106491 52.113 71 29 2 138 204 184 253 4.66e-17 79.3
Msa1229120 MtrunA17_Chr1g0194481 62.651 83 31 0 122 204 132 214 7.05e-31 115
Msa1229120 MtrunA17_Chr4g0051881 71.831 71 20 0 134 204 164 234 8.00e-31 115
Msa1229120 MtrunA17_Chr7g0224801 61.250 80 31 0 136 215 81 160 8.57e-31 111
Msa1229120 MtrunA17_Chr5g0445311 61.538 78 30 0 127 204 343 420 1.78e-30 117
Msa1229120 MtrunA17_Chr5g0445311 46.067 89 47 1 123 211 175 262 4.47e-16 76.3
Msa1229120 MtrunA17_Chr3g0101131 62.821 78 29 0 127 204 394 471 3.19e-30 117
Msa1229120 MtrunA17_Chr3g0101131 59.649 57 22 1 148 204 243 298 1.77e-16 77.8
Msa1229120 MtrunA17_Chr5g0418191 60.000 85 33 1 129 212 301 385 1.04e-29 114
Msa1229120 MtrunA17_Chr5g0418191 63.158 57 20 1 148 204 151 206 1.89e-17 80.1
Msa1229120 MtrunA17_Chr7g0249311 61.842 76 29 0 129 204 373 448 2.18e-29 115
Msa1229120 MtrunA17_Chr7g0249311 62.069 58 21 1 148 205 179 235 1.69e-18 83.6
Msa1229120 MtrunA17_Chr5g0443131 67.606 71 23 0 134 204 143 213 2.50e-29 111
Msa1229120 MtrunA17_Chr8g0386241 36.184 152 86 3 78 221 27 175 3.64e-29 107
Msa1229120 MtrunA17_Chr7g0249301 62.338 77 29 0 128 204 272 348 3.71e-29 112
Msa1229120 MtrunA17_Chr7g0249301 57.627 59 24 1 147 205 61 118 1.24e-15 74.7
Msa1229120 MtrunA17_Chr7g0270191 60.241 83 33 0 122 204 119 201 8.83e-29 109
Msa1229120 MtrunA17_Chr4g0004911 60.526 76 30 0 129 204 317 392 1.18e-28 112
Msa1229120 MtrunA17_Chr4g0004911 56.140 57 25 0 148 204 184 240 4.82e-16 76.3
Msa1229120 MtrunA17_Chr4g0042831 57.647 85 35 1 129 212 259 343 1.64e-28 110
Msa1229120 MtrunA17_Chr4g0042831 56.140 57 25 0 148 204 145 201 3.86e-15 73.6
Msa1229120 MtrunA17_Chr4g0068541 65.753 73 25 0 132 204 192 264 1.73e-28 110
Msa1229120 MtrunA17_Chr7g0243891 57.500 80 34 0 125 204 351 430 3.48e-28 111
Msa1229120 MtrunA17_Chr7g0243891 57.895 57 23 1 148 204 216 271 1.97e-15 74.7
Msa1229120 MtrunA17_Chr3g0129321 61.842 76 28 1 134 208 104 179 5.64e-28 105
Msa1229120 MtrunA17_Chr1g0150801 57.143 77 32 1 128 204 83 158 1.44e-26 100
Msa1229120 MtrunA17_Chr8g0383251 48.980 98 44 2 107 204 73 164 3.12e-25 97.4
Msa1229120 MtrunA17_Chr7g0263531 58.108 74 31 0 131 204 344 417 9.92e-25 100
Msa1229120 MtrunA17_Chr7g0263531 62.500 56 20 1 149 204 190 244 1.07e-16 78.2
Msa1229120 MtrunA17_Chr1g0188941 56.579 76 33 0 129 204 32 107 4.91e-24 92.4
Msa1229120 MtrunA17_Chr5g0447701 52.703 74 35 0 133 206 237 310 8.47e-22 92.0
Msa1229120 MtrunA17_Chr5g0447701 50.746 67 31 2 146 212 90 154 2.29e-12 65.5
Msa1229120 MtrunA17_Chr4g0074001 49.315 73 37 0 132 204 343 415 1.04e-20 89.7
Msa1229120 MtrunA17_Chr1g0189391 48.101 79 40 1 135 212 84 162 1.64e-20 88.2
Msa1229120 MtrunA17_Chr7g0238921 51.190 84 37 1 121 204 101 180 3.23e-20 87.0
Msa1229120 MtrunA17_Chr4g0060271 50.667 75 36 1 132 205 239 313 5.20e-20 87.8
Msa1229120 MtrunA17_Chr2g0288871 45.122 82 44 1 124 204 281 362 2.29e-19 85.9
Msa1229120 MtrunA17_Chr7g0270831 41.228 114 54 3 102 204 162 273 2.61e-19 85.5
Msa1229120 MtrunA17_Chr3g0139021 30.890 191 100 9 33 211 210 380 5.04e-19 84.7
Msa1229120 MtrunA17_Chr4g0075201 45.122 82 44 1 124 204 243 324 6.77e-19 84.7
Msa1229120 MtrunA17_Chr3g0099641 46.053 76 40 1 131 205 234 309 7.48e-19 84.3
Msa1229120 MtrunA17_Chr4g0053281 44.578 83 42 2 124 205 245 324 8.85e-19 83.2
Msa1229120 MtrunA17_Chr6g0485431 47.222 72 37 1 134 204 140 211 1.49e-18 82.8
Msa1229120 MtrunA17_Chr2g0322391 47.368 76 39 1 131 205 332 407 1.79e-18 83.6
Msa1229120 MtrunA17_Chr1g0147881 43.678 87 45 2 120 205 237 320 4.26e-18 81.3
Msa1229120 MtrunA17_Chr4g0025061 46.835 79 41 1 127 204 339 417 1.27e-17 80.9
Msa1229120 MtrunA17_Chr5g0401821 42.529 87 46 2 120 205 174 257 4.11e-17 77.8
Msa1229120 MtrunA17_Chr4g0051181 47.297 74 38 1 132 204 227 300 6.97e-17 78.6
Msa1229120 MtrunA17_Chr7g0216891 47.887 71 36 1 135 204 206 276 7.84e-17 78.6
Msa1229120 MtrunA17_Chr2g0333851 39.130 115 61 3 99 204 112 226 1.32e-16 77.0
Msa1229120 MtrunA17_Chr4g0071521 39.080 87 49 2 120 205 220 303 1.45e-16 77.0
Msa1229120 MtrunA17_Chr3g0136961 51.667 60 28 1 147 205 137 196 1.54e-16 76.6
Msa1229120 MtrunA17_Chr2g0302391 48.649 74 37 1 132 204 195 268 2.08e-16 77.0
Msa1229120 MtrunA17_Chr1g0184691 42.169 83 44 2 124 205 272 351 4.52e-16 75.9
Msa1229120 MtrunA17_Chr1g0150281 52.632 57 26 1 149 204 141 197 4.68e-16 75.1
Msa1229120 MtrunA17_Chr3g0126391 54.237 59 24 1 147 202 132 190 1.15e-15 74.7
Msa1229120 MtrunA17_Chr4g0001361 50.000 60 29 1 146 204 160 219 2.08e-15 73.6
Msa1229120 MtrunA17_Chr5g0447711 44.595 74 41 0 133 206 215 288 2.37e-15 73.6
Msa1229120 MtrunA17_Chr7g0228941 44.000 75 40 2 137 210 42 115 3.53e-15 69.3
Msa1229120 MtrunA17_Chr4g0025051 47.887 71 36 1 135 204 322 392 1.39e-14 72.0
Msa1229120 MtrunA17_Chr5g0432071 32.639 144 76 4 64 204 34 159 2.14e-14 69.3
Msa1229120 MtrunA17_Chr1g0150271 45.000 60 32 1 146 204 99 158 2.40e-14 70.1
Msa1229120 MtrunA17_Chr7g0270051 54.386 57 25 1 149 204 54 110 1.06e-13 68.2
Msa1229120 MtrunA17_Chr2g0293481 33.065 124 73 3 91 204 201 324 1.59e-13 68.9
Msa1229120 MtrunA17_Chr8g0387981 40.000 90 46 2 121 202 100 189 1.74e-13 68.6
Msa1229120 MtrunA17_Chr2g0289181 50.000 58 28 1 149 205 15 72 2.29e-13 67.0
Msa1229120 MtrunA17_Chr8g0348311 42.308 78 42 3 128 204 137 212 2.86e-13 67.8
Msa1229120 MtrunA17_Chr8g0379461 50.000 58 28 1 149 205 77 134 4.58e-13 66.2
Msa1229120 MtrunA17_Chr7g0244981 50.000 58 26 1 148 202 122 179 7.80e-13 66.2
Msa1229120 MtrunA17_Chr2g0284321 48.276 58 29 1 149 205 36 93 1.06e-12 64.7
Msa1229120 MtrunA17_Chr8g0387501 49.153 59 29 1 147 204 128 186 1.54e-12 65.1
Msa1229120 MtrunA17_Chr7g0275531 45.070 71 36 1 135 202 105 175 1.86e-12 65.5
Msa1229120 MtrunA17_Chr2g0315361 35.714 98 57 2 108 202 111 205 2.21e-12 65.1
Msa1229120 MtrunA17_Chr2g0315381 38.144 97 54 3 109 202 108 201 2.30e-12 65.1
Msa1229120 MtrunA17_Chr7g0244971 33.813 139 62 6 107 221 73 205 3.29e-12 64.3
Msa1229120 MtrunA17_Chr1g0202461 39.241 79 46 2 128 205 242 319 3.90e-12 64.7
Msa1229120 MtrunA17_Chr7g0248691 41.573 89 47 3 118 204 126 211 4.95e-12 64.3
Msa1229120 MtrunA17_Chr8g0334541 44.776 67 31 2 148 211 103 166 1.44e-11 62.4
Msa1229120 MtrunA17_Chr2g0319961 37.895 95 48 3 121 205 45 138 1.49e-11 62.4
Msa1229120 MtrunA17_Chr8g0347251 45.763 59 29 1 147 202 135 193 2.68e-11 62.0
Msa1229120 MtrunA17_Chr8g0350621 44.828 58 29 1 148 202 111 168 4.94e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229120 AT2G44745.1 56.195 226 80 7 3 221 5 218 1.32e-71 217
Msa1229120 AT4G39410.1 75.000 96 20 1 124 215 199 294 2.03e-45 153
Msa1229120 AT2G46130.1 65.432 81 27 1 129 209 11 90 2.85e-35 121
Msa1229120 AT1G69310.4 66.265 83 28 0 122 204 121 203 5.78e-35 125
Msa1229120 AT1G69310.2 66.265 83 28 0 122 204 121 203 5.78e-35 125
Msa1229120 AT1G69310.1 66.265 83 28 0 122 204 121 203 5.78e-35 125
Msa1229120 AT1G64000.1 64.706 85 29 1 124 208 90 173 9.93e-34 120
Msa1229120 AT5G41570.1 60.000 90 35 1 119 208 69 157 1.44e-33 119
Msa1229120 AT4G18170.1 65.060 83 29 0 122 204 146 228 1.35e-31 117
Msa1229120 AT4G26640.5 55.914 93 41 0 129 221 186 278 4.55e-31 117
Msa1229120 AT4G26640.5 59.322 59 23 1 146 204 33 90 3.62e-16 76.6
Msa1229120 AT4G26640.6 55.914 93 41 0 129 221 186 278 4.55e-31 117
Msa1229120 AT4G26640.6 59.322 59 23 1 146 204 33 90 3.62e-16 76.6
Msa1229120 AT4G26640.4 55.914 93 41 0 129 221 186 278 4.55e-31 117
Msa1229120 AT4G26640.4 59.322 59 23 1 146 204 33 90 3.62e-16 76.6
Msa1229120 AT4G26640.3 55.914 93 41 0 129 221 186 278 4.55e-31 117
Msa1229120 AT4G26640.3 59.322 59 23 1 146 204 33 90 3.62e-16 76.6
Msa1229120 AT5G56270.1 67.105 76 25 0 129 204 468 543 5.48e-31 120
Msa1229120 AT5G56270.1 59.649 57 22 1 148 204 273 328 5.85e-17 79.3
Msa1229120 AT4G26640.7 55.914 93 41 0 129 221 322 414 7.34e-31 119
Msa1229120 AT4G26640.7 59.322 59 23 1 146 204 169 226 1.67e-16 78.2
Msa1229120 AT3G01080.2 65.789 76 26 0 129 204 325 400 8.27e-31 118
Msa1229120 AT3G01080.2 59.649 57 22 1 148 204 205 260 4.85e-17 79.3
Msa1229120 AT4G26640.1 55.914 93 41 0 129 221 290 382 8.31e-31 118
Msa1229120 AT4G26640.1 59.322 59 23 1 146 204 137 194 2.27e-16 77.8
Msa1229120 AT5G13080.1 55.435 92 36 1 135 221 54 145 8.56e-31 110
Msa1229120 AT2G38470.1 65.789 76 26 0 129 204 343 418 1.06e-30 118
Msa1229120 AT2G38470.1 57.895 57 23 1 148 204 184 239 6.19e-15 73.6
Msa1229120 AT4G26640.2 55.914 93 41 0 129 221 362 454 1.17e-30 118
Msa1229120 AT4G26640.2 59.322 59 23 1 146 204 209 266 1.84e-16 77.8
Msa1229120 AT3G01080.1 65.789 76 26 0 129 204 287 362 1.43e-30 117
Msa1229120 AT3G01080.1 59.649 57 22 1 148 204 167 222 8.79e-17 78.6
Msa1229120 AT5G49520.1 69.863 73 22 0 132 204 205 277 1.49e-30 116
Msa1229120 AT2G30250.1 58.427 89 37 0 116 204 296 384 2.97e-30 115
Msa1229120 AT2G30250.1 44.737 76 36 2 129 204 152 221 8.00e-13 67.0
Msa1229120 AT5G26170.1 67.606 71 23 0 135 205 100 170 4.29e-30 110
Msa1229120 AT1G13960.1 57.647 85 36 0 120 204 381 465 7.09e-30 116
Msa1229120 AT1G13960.1 61.017 59 22 1 148 206 229 286 1.67e-17 80.9
Msa1229120 AT1G13960.2 57.647 85 36 0 120 204 228 312 8.68e-30 114
Msa1229120 AT1G13960.2 61.017 59 22 1 148 206 76 133 4.46e-17 79.0
Msa1229120 AT2G46130.2 60.494 81 27 2 129 209 11 86 9.93e-30 107
Msa1229120 AT1G69310.3 61.446 83 28 1 122 204 121 199 2.28e-29 111
Msa1229120 AT1G29860.1 67.123 73 24 0 132 204 120 192 2.57e-29 110
Msa1229120 AT5G07100.2 51.515 99 48 0 106 204 99 197 2.58e-29 109
Msa1229120 AT5G07100.2 56.140 57 25 0 148 204 24 80 1.47e-15 73.2
Msa1229120 AT5G07100.4 51.515 99 48 0 106 204 99 197 2.58e-29 109
Msa1229120 AT5G07100.4 56.140 57 25 0 148 204 24 80 1.47e-15 73.2
Msa1229120 AT5G07100.5 51.515 99 48 0 106 204 99 197 2.58e-29 109
Msa1229120 AT5G07100.5 56.140 57 25 0 148 204 24 80 1.47e-15 73.2
Msa1229120 AT5G07100.3 51.515 99 48 0 106 204 99 197 2.58e-29 109
Msa1229120 AT5G07100.3 56.140 57 25 0 148 204 24 80 1.47e-15 73.2
Msa1229120 AT5G07100.1 51.515 99 48 0 106 204 192 290 2.69e-29 111
Msa1229120 AT5G07100.1 56.140 57 25 0 148 204 117 173 1.01e-15 74.7
Msa1229120 AT4G26440.1 49.219 128 50 2 100 213 311 437 3.91e-29 114
Msa1229120 AT4G26440.1 60.345 58 22 1 148 205 178 234 2.05e-17 80.9
Msa1229120 AT2G03340.1 60.000 80 32 0 125 204 392 471 7.77e-29 113
Msa1229120 AT2G03340.1 63.158 57 20 1 148 204 250 305 3.65e-17 80.1
Msa1229120 AT2G47260.1 60.241 83 33 0 122 204 148 230 6.34e-28 108
Msa1229120 AT5G46350.1 66.197 71 24 0 134 204 169 239 1.16e-27 107
Msa1229120 AT3G01970.1 58.025 81 34 0 135 215 52 132 3.07e-27 102
Msa1229120 AT5G64810.1 61.429 70 27 0 135 204 97 166 7.41e-27 102
Msa1229120 AT3G62340.1 59.756 82 31 1 123 204 95 174 2.33e-24 97.8
Msa1229120 AT2G04880.2 49.438 89 45 0 116 204 251 339 3.79e-24 99.8
Msa1229120 AT2G04880.2 57.627 59 24 1 146 204 109 166 7.02e-16 76.3
Msa1229120 AT2G04880.1 49.438 89 45 0 116 204 275 363 5.17e-24 99.4
Msa1229120 AT2G04880.1 57.627 59 24 1 146 204 109 166 8.30e-16 75.9
Msa1229120 AT1G55600.1 57.143 70 30 0 135 204 294 363 2.25e-23 97.8
Msa1229120 AT2G37260.2 62.121 66 25 0 139 204 258 323 3.17e-23 95.9
Msa1229120 AT2G37260.2 61.404 57 21 1 149 205 84 139 2.14e-15 74.3
Msa1229120 AT2G37260.3 62.121 66 25 0 139 204 260 325 3.49e-23 95.9
Msa1229120 AT2G37260.3 61.404 57 21 1 149 205 86 141 2.13e-15 74.3
Msa1229120 AT2G37260.1 66.667 60 20 0 145 204 346 405 5.10e-23 96.3
Msa1229120 AT2G37260.1 61.404 57 21 1 149 205 166 221 1.84e-15 74.7
Msa1229120 AT2G21900.1 44.444 90 47 1 118 204 76 165 6.85e-21 87.0
Msa1229120 AT5G15130.2 44.444 90 49 1 117 205 154 243 7.07e-21 90.5
Msa1229120 AT5G15130.1 44.444 90 49 1 117 205 196 285 9.15e-21 90.5
Msa1229120 AT4G30935.1 51.429 70 34 0 135 204 318 387 2.89e-20 89.0
Msa1229120 AT4G04450.2 38.983 118 58 3 94 204 145 255 5.45e-20 87.8
Msa1229120 AT2G23320.1 38.760 129 70 3 78 205 178 298 1.40e-19 85.5
Msa1229120 AT4G04450.1 45.161 93 44 2 119 204 257 349 2.09e-19 86.7
Msa1229120 AT4G24240.1 39.796 98 55 2 120 216 256 350 5.57e-19 84.3
Msa1229120 AT1G62300.1 49.333 75 37 1 131 204 295 369 6.16e-19 85.1
Msa1229120 AT5G28650.1 40.000 105 57 3 102 205 221 320 7.14e-19 84.0
Msa1229120 AT4G22070.4 49.333 75 37 1 131 204 280 354 8.48e-19 84.7
Msa1229120 AT4G22070.3 49.333 75 37 1 131 204 280 354 8.48e-19 84.7
Msa1229120 AT4G22070.2 49.333 75 37 1 131 204 280 354 8.48e-19 84.7
Msa1229120 AT4G22070.1 49.333 75 37 1 131 204 280 354 8.48e-19 84.7
Msa1229120 AT3G04670.1 39.423 104 57 3 103 205 222 320 6.07e-18 81.3
Msa1229120 AT2G30590.1 46.512 86 42 2 120 204 288 370 7.03e-18 81.6
Msa1229120 AT3G01080.3 59.649 57 22 1 148 204 205 260 7.82e-18 80.9
Msa1229120 AT4G31550.2 44.706 85 43 2 121 204 221 302 8.22e-18 80.9
Msa1229120 AT4G01720.1 50.000 74 36 1 132 204 223 296 1.40e-17 81.3
Msa1229120 AT5G43290.1 61.404 57 22 0 148 204 114 170 1.88e-17 79.3
Msa1229120 AT4G31550.1 45.122 82 41 2 124 204 225 303 2.39e-17 79.7
Msa1229120 AT1G18860.1 46.667 75 39 1 131 204 222 296 3.19e-17 80.1
Msa1229120 AT2G24570.1 45.122 82 41 2 124 204 222 300 5.32e-17 78.6
Msa1229120 AT2G25000.2 47.761 67 33 2 141 205 95 161 6.02e-17 77.0
Msa1229120 AT2G25000.4 47.761 67 33 2 141 205 95 161 6.02e-17 77.0
Msa1229120 AT2G25000.3 47.761 67 33 2 141 205 117 183 9.78e-17 76.6
Msa1229120 AT2G25000.1 50.000 60 29 1 147 205 145 204 1.38e-16 76.6
Msa1229120 AT4G31800.2 50.847 59 28 1 147 204 110 168 1.58e-16 76.3
Msa1229120 AT1G68150.1 48.649 74 37 1 132 204 219 292 1.75e-16 77.4
Msa1229120 AT4G31800.1 50.847 59 28 1 147 204 175 233 2.97e-16 76.3
Msa1229120 AT1G80840.1 51.667 60 28 1 146 204 144 203 4.58e-16 75.9
Msa1229120 AT4G01250.1 41.111 90 49 3 116 204 99 185 2.00e-15 73.9
Msa1229120 AT1G69810.2 43.421 76 41 2 131 204 128 203 9.80e-14 69.3
Msa1229120 AT1G69810.1 43.421 76 41 2 131 204 186 261 1.34e-13 69.3
Msa1229120 AT2G34830.2 30.857 175 90 7 44 204 124 281 1.36e-13 69.3
Msa1229120 AT2G34830.1 30.857 175 90 7 44 204 115 272 1.48e-13 69.3
Msa1229120 AT1G29280.1 44.615 65 35 1 141 204 67 131 2.50e-13 67.4
Msa1229120 AT4G12020.3 51.667 60 28 1 147 206 467 525 4.10e-13 68.6
Msa1229120 AT4G12020.3 70.000 40 12 0 129 168 622 661 7.18e-12 64.7
Msa1229120 AT4G12020.10 51.667 60 28 1 147 206 467 525 4.14e-13 68.6
Msa1229120 AT4G12020.10 70.000 40 12 0 129 168 622 661 7.11e-12 64.7
Msa1229120 AT4G12020.1 51.667 60 28 1 147 206 467 525 4.28e-13 68.6
Msa1229120 AT4G12020.1 70.000 40 12 0 129 168 622 661 7.50e-12 64.7
Msa1229120 AT4G12020.9 51.667 60 28 1 147 206 467 525 4.28e-13 68.6
Msa1229120 AT4G12020.9 70.000 40 12 0 129 168 622 661 7.50e-12 64.7
Msa1229120 AT4G12020.4 51.667 60 28 1 147 206 467 525 4.30e-13 68.6
Msa1229120 AT4G12020.4 70.000 40 12 0 129 168 622 661 7.53e-12 64.7
Msa1229120 AT4G12020.7 51.667 60 28 1 147 206 467 525 4.40e-13 68.6
Msa1229120 AT4G12020.7 70.000 40 12 0 129 168 622 661 7.78e-12 64.7
Msa1229120 AT4G12020.6 51.667 60 28 1 147 206 467 525 4.57e-13 68.2
Msa1229120 AT4G12020.6 70.000 40 12 0 129 168 622 661 7.63e-12 64.7
Msa1229120 AT4G12020.8 51.667 60 28 1 147 206 467 525 4.57e-13 68.2
Msa1229120 AT4G12020.8 70.000 40 12 0 129 168 622 661 7.63e-12 64.7
Msa1229120 AT4G12020.2 51.667 60 28 1 147 206 467 525 4.59e-13 68.2
Msa1229120 AT4G12020.2 70.000 40 12 0 129 168 622 661 7.82e-12 64.7
Msa1229120 AT4G12020.5 51.667 60 28 1 147 206 400 458 4.67e-13 68.2
Msa1229120 AT4G12020.5 70.000 40 12 0 129 168 555 594 8.56e-12 64.7
Msa1229120 AT4G12020.11 51.667 60 28 1 147 206 467 525 6.42e-13 67.8
Msa1229120 AT4G12020.11 70.000 40 12 0 129 168 622 661 8.56e-12 64.7
Msa1229120 AT1G30650.1 38.043 92 54 3 116 204 183 274 1.38e-12 66.6
Msa1229120 AT2G40740.1 51.724 58 25 1 148 202 173 230 1.86e-12 65.5
Msa1229120 AT3G56400.1 32.673 101 61 2 105 202 81 177 1.87e-12 65.5
Msa1229120 AT2G40740.3 51.724 58 25 1 148 202 182 239 2.36e-12 65.1
Msa1229120 AT4G23550.1 45.902 61 32 1 145 204 137 197 2.64e-12 65.1
Msa1229120 AT1G66600.1 49.153 59 27 1 147 202 102 160 2.86e-12 64.3
Msa1229120 AT1G66560.1 48.276 58 27 1 148 202 103 160 3.44e-12 64.3
Msa1229120 AT1G66550.2 48.276 58 27 1 148 202 103 160 3.51e-12 64.3
Msa1229120 AT1G66550.1 48.276 58 27 1 148 202 108 165 4.42e-12 63.9
Msa1229120 AT2G40750.1 37.895 95 49 3 118 202 115 209 5.73e-12 64.3
Msa1229120 AT5G52830.1 49.123 57 28 1 149 204 166 222 1.01e-11 63.5
Msa1229120 AT3G58710.1 40.506 79 45 2 139 215 62 140 1.13e-11 63.2
Msa1229120 AT3G58710.2 40.506 79 45 2 139 215 61 139 1.13e-11 63.2
Msa1229120 AT5G01900.1 39.535 86 41 3 142 216 104 189 1.52e-11 62.8
Msa1229120 AT5G22570.1 49.123 57 26 1 149 202 111 167 3.97e-11 61.6

Find 57 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAACTTGGAGATCATAAT+TGG 0.180861 8_2:+4740282 None:intergenic
TATTTATATACATACGTAAA+TGG 0.225849 8_2:+4734662 None:intergenic
ATTGAACAAAACCCATTTCA+TGG 0.296272 8_2:+4740236 None:intergenic
TTCTCATCACTCACAGCTTT+GGG 0.313305 8_2:+4739569 None:intergenic
CTCTCAAGCTATCCATGAAA+TGG 0.321044 8_2:-4740248 Msa1229120:CDS
ATTCTCATCACTCACAGCTT+TGG 0.324655 8_2:+4739568 None:intergenic
ATTGAGAAAGTTGAGAAGGT+TGG 0.338269 8_2:+4740167 None:intergenic
TTGAGAAAGTTGAGAAGGTT+GGG 0.349918 8_2:+4740168 None:intergenic
CATCTACATCACTTCTTGTC+TGG 0.400937 8_2:+4739186 None:intergenic
TTTAATCTTTGTTTCAAAGA+TGG 0.401329 8_2:-4734709 Msa1229120:three_prime_UTR
GGTTACAAATGGAGGAAGTA+TGG 0.401960 8_2:-4739152 Msa1229120:CDS
TAGTAGTGACAAGATCATTA+TGG 0.415610 8_2:+4740065 None:intergenic
CTTTCTCAATCTCTAAATTC+CGG 0.416525 8_2:-4740154 Msa1229120:CDS
ATTATAATTACCTTGGATGA+AGG 0.467552 8_2:+4739108 None:intergenic
AACTCCTTGGAACAACGAAC+AGG 0.468098 8_2:-4740041 Msa1229120:intron
ATTATGTCTGCCTTCATAAG+TGG 0.474936 8_2:+4734914 None:intergenic
TCTCAAGCTATCCATGAAAT+GGG 0.477777 8_2:-4740247 Msa1229120:intron
AGAGATTGAGAAAGTTGAGA+AGG 0.481462 8_2:+4740163 None:intergenic
GGCGTTGGTGGTGCTACGGC+CGG 0.484990 8_2:+4740135 None:intergenic
GAAACTTGGAGATCATAATT+GGG 0.491669 8_2:+4740283 None:intergenic
TGTGACGGCTGCACCGGTAG+TGG 0.499548 8_2:+4740114 None:intergenic
AAGATCATTATGGCTAAATC+CGG 0.500033 8_2:+4740075 None:intergenic
AGCACCACCAACGCCACTAC+CGG 0.520442 8_2:-4740127 Msa1229120:CDS
GCTGCACACATAACAATTGT+CGG 0.522647 8_2:-4734986 Msa1229120:CDS
CATTTCATGGATAGCTTGAG+AGG 0.523950 8_2:+4740249 None:intergenic
TGCTTGATGATGGTTACAAA+TGG 0.537448 8_2:-4739163 Msa1229120:CDS
AGGTATTTGTGAATGAAACT+TGG 0.539388 8_2:+4740269 None:intergenic
AGAAGAGCAAGGCGAAAGTG+AGG 0.541509 8_2:-4739238 Msa1229120:CDS
TAGTGGCGTTGGTGGTGCTA+CGG 0.543122 8_2:+4740131 None:intergenic
ACCACCTGTTCGTTGTTCCA+AGG 0.544699 8_2:+4740037 None:intergenic
CTGCACACATAACAATTGTC+GGG 0.546740 8_2:-4734985 Msa1229120:CDS
TGCACTGGAAATACTAGTGA+TGG 0.547346 8_2:-4739545 Msa1229120:CDS
ATATATAGGTGGAGGAGTGG+AGG 0.551301 8_2:-4739266 Msa1229120:intron
GGCTGCACCGGTAGTGGCGT+TGG 0.551478 8_2:+4740120 None:intergenic
ATGATATATAGGTGGAGGAG+TGG 0.558137 8_2:-4739269 Msa1229120:intron
TGCACCGGTAGTGGCGTTGG+TGG 0.563104 8_2:+4740123 None:intergenic
ACAACTACTACCGTGGCTGC+CGG 0.563419 8_2:-4740094 Msa1229120:CDS
ATGGTGATAACCACTTATGA+AGG 0.566894 8_2:-4734924 Msa1229120:CDS
GAAGGTTGGGATTGTGTAGA+GGG 0.569637 8_2:+4740181 None:intergenic
CTTGTCTGGAAACAAAACCT+TGG 0.574196 8_2:+4739200 None:intergenic
GATGTAGATGTGCTTGATGA+TGG 0.574505 8_2:-4739173 Msa1229120:CDS
GTGAGTGATGAGAATTGCAC+TGG 0.574611 8_2:-4739560 Msa1229120:CDS
ATGGCTAAATCCGGCAGCCA+CGG 0.578404 8_2:+4740084 None:intergenic
AGAAGGTTGGGATTGTGTAG+AGG 0.578720 8_2:+4740180 None:intergenic
AGTAGTTGTGACGGCTGCAC+CGG 0.584577 8_2:+4740108 None:intergenic
TTGTCACTACTAGAACTCCT+TGG 0.585526 8_2:-4740054 Msa1229120:CDS
GGAGGAAACTTAGAGAGCCA+AGG 0.588730 8_2:-4739217 Msa1229120:CDS
TGGAGGAGCAGAGAAGAGCA+AGG 0.596711 8_2:-4739249 Msa1229120:CDS
CTAGTGATGGCAACAACACA+TGG 0.604178 8_2:-4739532 Msa1229120:intron
CATAAAAGAAGGGATATGGA+AGG 0.606921 8_2:-4740319 None:intergenic
TCAAGAATAGCCTTCATCCA+AGG 0.610641 8_2:-4739118 Msa1229120:intron
AGAGCAAGGCGAAAGTGAGG+AGG 0.623548 8_2:-4739235 Msa1229120:CDS
AGCCACGGTAGTAGTTGTGA+CGG 0.629318 8_2:+4740099 None:intergenic
ACTCTCAGAAGATTGTCGTA+TGG 0.646484 8_2:-4734943 Msa1229120:CDS
AGCCGTCACAACTACTACCG+TGG 0.652734 8_2:-4740101 Msa1229120:CDS
GAAGAATTAGAGTCGTCACA+AGG 0.658426 8_2:+4734885 None:intergenic
TTGATGATGGTTACAAATGG+AGG 0.665075 8_2:-4739160 Msa1229120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATCATAATACAATAA+CGG + chr8_2:4735927-4735946 None:intergenic 10.0%
!!! ACTTTAAAAAAATAACTATA+CGG + chr8_2:4738128-4738147 None:intergenic 10.0%
!!! TATTTATTTTTTAACAAGAA+AGG + chr8_2:4738377-4738396 None:intergenic 10.0%
!!! TATAGTATATAAATTAGTTT+AGG - chr8_2:4738899-4738918 Msa1229120:intron 10.0%
!!! TTTTTTAAAAGATAAATACA+AGG + chr8_2:4739355-4739374 None:intergenic 10.0%
!!! AAACATTTTTATTTTATTAC+GGG - chr8_2:4739403-4739422 Msa1229120:intron 10.0%
!! AATTCAATTGATGTTAAATT+TGG + chr8_2:4735056-4735075 None:intergenic 15.0%
!! ACTAAATAATTATACATACA+GGG + chr8_2:4735147-4735166 None:intergenic 15.0%
!! AACTAAATAATTATACATAC+AGG + chr8_2:4735148-4735167 None:intergenic 15.0%
!! GAAAAAAAAAACATTGAAAT+TGG + chr8_2:4735491-4735510 None:intergenic 15.0%
!! AATAAAAATGATCCAAAAAA+AGG + chr8_2:4735631-4735650 None:intergenic 15.0%
!! AAAAATGAAATATAGTAGAT+CGG - chr8_2:4736164-4736183 Msa1229120:intron 15.0%
!!! GTATTTTTTTGAGTAATATT+TGG - chr8_2:4736619-4736638 Msa1229120:intron 15.0%
!! GAAAAATAGAAAGATATTAT+TGG - chr8_2:4736990-4737009 Msa1229120:intron 15.0%
!!! AATTACTTCTAATATTTTGT+GGG + chr8_2:4738050-4738069 None:intergenic 15.0%
!!! TGTTATTTGAAATACTTATT+TGG - chr8_2:4738150-4738169 Msa1229120:intron 15.0%
!!! TTGAAATTTTTGTTCATTTA+AGG + chr8_2:4738258-4738277 None:intergenic 15.0%
!! TTAAATGAACAAAAATTTCA+AGG - chr8_2:4738257-4738276 Msa1229120:intron 15.0%
!!! AAGAAAACATTTTATCTTAA+AGG + chr8_2:4738409-4738428 None:intergenic 15.0%
!!! TTTTCTTTACAAATATTTTG+AGG - chr8_2:4738422-4738441 Msa1229120:intron 15.0%
!!! AGAGGATATTTTTTTTTTTT+TGG - chr8_2:4739019-4739038 Msa1229120:intron 15.0%
!!! GATATTTTTTTTTTTTTGGA+AGG - chr8_2:4739023-4739042 Msa1229120:intron 15.0%
!! AATAATCATTCACAAATTTA+AGG - chr8_2:4739488-4739507 Msa1229120:intron 15.0%
!!! TTTTTTTCATATAATACATG+AGG - chr8_2:4740201-4740220 Msa1229120:CDS 15.0%
!! TGATTAATATACTAATGATG+TGG - chr8_2:4735328-4735347 Msa1229120:intron 20.0%
!!! TGAAATTGGCAATTATTTTT+TGG + chr8_2:4735477-4735496 None:intergenic 20.0%
!!! TTTTATTTGAAGACTCATAT+AGG - chr8_2:4735657-4735676 Msa1229120:intron 20.0%
!! TTTATTTGAAGACTCATATA+GGG - chr8_2:4735658-4735677 Msa1229120:intron 20.0%
!!! TGATTTGTATGATGATATAT+AGG - chr8_2:4735698-4735717 Msa1229120:intron 20.0%
!! GATTATCACGTATAATATAT+AGG - chr8_2:4735969-4735988 Msa1229120:intron 20.0%
!!! TGGACTTTAAAATTATATCA+AGG - chr8_2:4736082-4736101 Msa1229120:intron 20.0%
!!! TCGTTTTTTATCAATAAACT+TGG + chr8_2:4736372-4736391 None:intergenic 20.0%
!!! TTTTGTTTTGTGATATTTGT+AGG + chr8_2:4736402-4736421 None:intergenic 20.0%
!!! TATAAATTCAAACACTGATT+TGG + chr8_2:4736468-4736487 None:intergenic 20.0%
!! ATCAGTGTTTGAATTTATAA+TGG - chr8_2:4736469-4736488 Msa1229120:intron 20.0%
!!! GTTGTTTTATTTTCTTTGTT+TGG + chr8_2:4736498-4736517 None:intergenic 20.0%
!! ATATTATATAATCGAGTACA+TGG - chr8_2:4736687-4736706 Msa1229120:intron 20.0%
!! ATATATATGTATATCTCTAG+TGG - chr8_2:4737020-4737039 Msa1229120:intron 20.0%
!! AATGAATGTAGGAAAATTAT+AGG - chr8_2:4737361-4737380 Msa1229120:intron 20.0%
!! AATATGACATGATAATAGTA+AGG - chr8_2:4737450-4737469 Msa1229120:intron 20.0%
!! AAAAGTGATCAATAGATAAT+GGG + chr8_2:4737949-4737968 None:intergenic 20.0%
!! TAAAAGTGATCAATAGATAA+TGG + chr8_2:4737950-4737969 None:intergenic 20.0%
!!! ATCTATTGATCACTTTTATT+AGG - chr8_2:4737952-4737971 Msa1229120:intron 20.0%
!!! TCTATTGATCACTTTTATTA+GGG - chr8_2:4737953-4737972 Msa1229120:intron 20.0%
!!! GGTTTTGGTTTTAATAAAAA+CGG + chr8_2:4738012-4738031 None:intergenic 20.0%
!!! GAATTACTTCTAATATTTTG+TGG + chr8_2:4738051-4738070 None:intergenic 20.0%
!!! ACAATTTTGACATCAAATTT+TGG - chr8_2:4738177-4738196 Msa1229120:intron 20.0%
!! ATCTTACTATACTATACTAT+TGG + chr8_2:4738538-4738557 None:intergenic 20.0%
!!! CTCTTTTATTTTTTCGTAAT+TGG + chr8_2:4738628-4738647 None:intergenic 20.0%
!!! CAAAGTTTAATAGTTTTACT+TGG - chr8_2:4738691-4738710 Msa1229120:intron 20.0%
!! TATTAAACCAAAGAAAATGT+TGG - chr8_2:4738766-4738785 Msa1229120:intron 20.0%
!!! AAATTTACCAACATTTTCTT+TGG + chr8_2:4738776-4738795 None:intergenic 20.0%
!! AATGTAAACAAATTGACTAT+TGG - chr8_2:4738951-4738970 Msa1229120:intron 20.0%
!! AAAAGATTGTTAAGTTTCAA+GGG + chr8_2:4739519-4739538 None:intergenic 20.0%
!! AAAAAGATTGTTAAGTTTCA+AGG + chr8_2:4739520-4739539 None:intergenic 20.0%
!! CTTATATATCTAATGTCTTA+AGG + chr8_2:4739722-4739741 None:intergenic 20.0%
!! TCCATTATTTACCTATTTAT+AGG - chr8_2:4739758-4739777 Msa1229120:intron 20.0%
!!! TTTAATCTTTGTTTCAAAGA+TGG - chr8_2:4740269-4740288 Msa1229120:CDS 20.0%
!!! ACTTTTGTGATTTTTTGATC+AGG - chr8_2:4735372-4735391 Msa1229120:intron 25.0%
!!! ACTAATTTGAAGCCTTTTTT+TGG - chr8_2:4735616-4735635 Msa1229120:intron 25.0%
! TTATTTGAAGACTCATATAG+GGG - chr8_2:4735659-4735678 Msa1229120:intron 25.0%
! TTTGTATGATGATATATAGG+TGG - chr8_2:4735701-4735720 Msa1229120:intron 25.0%
! ATTATAATTACCTTGGATGA+AGG + chr8_2:4735873-4735892 None:intergenic 25.0%
! TGAAGAGATTATAATTACCT+TGG + chr8_2:4735880-4735899 None:intergenic 25.0%
!!! TTTTTTCATAACTCTCCAAA+GGG + chr8_2:4736115-4736134 None:intergenic 25.0%
!!! ATTTTTTCATAACTCTCCAA+AGG + chr8_2:4736116-4736135 None:intergenic 25.0%
! AAAATGAAATCATTTCCCTT+TGG - chr8_2:4736131-4736150 Msa1229120:intron 25.0%
!!! TTTTTTCTTAACTCTCCAAA+GGG + chr8_2:4736149-4736168 None:intergenic 25.0%
!!! ATTTTTTCTTAACTCTCCAA+AGG + chr8_2:4736150-4736169 None:intergenic 25.0%
!!! AACATTGATTTGTTCAAAGT+TGG - chr8_2:4736263-4736282 Msa1229120:intron 25.0%
!! TATTGTTTTCGATCTATATG+AGG + chr8_2:4736293-4736312 None:intergenic 25.0%
! TTCAAAGTCGCTAAAATAAA+AGG - chr8_2:4736318-4736337 Msa1229120:intron 25.0%
! TCAAAGTCGCTAAAATAAAA+GGG - chr8_2:4736319-4736338 Msa1229120:intron 25.0%
! AAATAAAAGGGATAAACATG+TGG - chr8_2:4736331-4736350 Msa1229120:intron 25.0%
! TGATTATTTCGTGTAGTATA+AGG - chr8_2:4736593-4736612 Msa1229120:intron 25.0%
! GATTATTTCGTGTAGTATAA+GGG - chr8_2:4736594-4736613 Msa1229120:intron 25.0%
!!! TGTCTTTTTTGGGAAAAATA+AGG - chr8_2:4736750-4736769 Msa1229120:intron 25.0%
!!! GTCTTTTTTGGGAAAAATAA+GGG - chr8_2:4736751-4736770 Msa1229120:intron 25.0%
! AATTTCATTAGTTAAACGCT+AGG + chr8_2:4737155-4737174 None:intergenic 25.0%
!! ATGTATGTTCATTAGTGTTT+TGG - chr8_2:4737266-4737285 Msa1229120:intron 25.0%
!! TGTATGTTCATTAGTGTTTT+GGG - chr8_2:4737267-4737286 Msa1229120:intron 25.0%
! AGAGAGATAAAAAGAAAATG+AGG - chr8_2:4737333-4737352 Msa1229120:intron 25.0%
! TGATAATTTAAGAATCCATG+AGG + chr8_2:4737398-4737417 None:intergenic 25.0%
! AAGATATATATTGTCATCGA+TGG + chr8_2:4737508-4737527 None:intergenic 25.0%
! AAACAATGCCTATATTTCTT+AGG - chr8_2:4737586-4737605 Msa1229120:intron 25.0%
!! AAATGATGTTTTATCAAGCT+TGG + chr8_2:4738479-4738498 None:intergenic 25.0%
! TGATAAAACATCATTTAGTG+AGG - chr8_2:4738483-4738502 Msa1229120:intron 25.0%
! GGAATGGAACTAATAATTAA+GGG - chr8_2:4738584-4738603 Msa1229120:intron 25.0%
! ATTAAGGGAAAGAAAAACAT+TGG - chr8_2:4738599-4738618 Msa1229120:intron 25.0%
! TATTAAACTTTGTTCCATGA+AGG + chr8_2:4738683-4738702 None:intergenic 25.0%
! CATGTGAATGAGTAAAATAT+TGG + chr8_2:4739133-4739152 None:intergenic 25.0%
!!! TGGGCTATAATTTTTTTTTG+AGG + chr8_2:4739226-4739245 None:intergenic 25.0%
!!! TTTGTTTTGGGTCATATTAT+AGG + chr8_2:4739564-4739583 None:intergenic 25.0%
! GCCTATAAATAGGTAAATAA+TGG + chr8_2:4739762-4739781 None:intergenic 25.0%
GAAACTTGGAGATCATAATT+GGG + chr8_2:4734698-4734717 None:intergenic 30.0%
TGAAACTTGGAGATCATAAT+TGG + chr8_2:4734699-4734718 None:intergenic 30.0%
AGGTATTTGTGAATGAAACT+TGG + chr8_2:4734712-4734731 None:intergenic 30.0%
ATTGAACAAAACCCATTTCA+TGG + chr8_2:4734745-4734764 None:intergenic 30.0%
CTTTCTCAATCTCTAAATTC+CGG - chr8_2:4734824-4734843 Msa1229120:three_prime_UTR 30.0%
AAGATCATTATGGCTAAATC+CGG + chr8_2:4734906-4734925 None:intergenic 30.0%
TAGTAGTGACAAGATCATTA+TGG + chr8_2:4734916-4734935 None:intergenic 30.0%
! TTCTGTCCTTTTCAATGTTA+GGG - chr8_2:4735269-4735288 Msa1229120:intron 30.0%
ACAATACCCTAACATTGAAA+AGG + chr8_2:4735278-4735297 None:intergenic 30.0%
TATAGAGAGAGAAAAGAAGA+AGG + chr8_2:4735513-4735532 None:intergenic 30.0%
TAACGGTAGCAAATTGAAAT+AGG + chr8_2:4735910-4735929 None:intergenic 30.0%
AGGAGTAAAATTCTCACTTA+TGG + chr8_2:4736215-4736234 None:intergenic 30.0%
! GAGAATTTTACTCCTATCTT+TGG - chr8_2:4736220-4736239 Msa1229120:intron 30.0%
AAGAGAAAAATGCCAAAGAT+AGG + chr8_2:4736235-4736254 None:intergenic 30.0%
TTGTTCACCATATATTGATG+CGG + chr8_2:4736522-4736541 None:intergenic 30.0%
TATTTGAACACCTAAGTTTC+AGG - chr8_2:4736647-4736666 Msa1229120:intron 30.0%
! AACATTTTCACCTGAAACTT+AGG + chr8_2:4736660-4736679 None:intergenic 30.0%
!!! TGAAGGTAGAATGTCTTTTT+TGG - chr8_2:4736739-4736758 Msa1229120:intron 30.0%
!!! GAAGGTAGAATGTCTTTTTT+GGG - chr8_2:4736740-4736759 Msa1229120:intron 30.0%
! GTTTGGTTTCAAAATGTTTG+AGG + chr8_2:4736808-4736827 None:intergenic 30.0%
ACATTATGTACATAGGACAA+AGG + chr8_2:4737102-4737121 None:intergenic 30.0%
TTTGGGAACATTATGTACAT+AGG + chr8_2:4737109-4737128 None:intergenic 30.0%
AGGATTAAGTGAAAGAAGTT+GGG + chr8_2:4737135-4737154 None:intergenic 30.0%
TAGGATTAAGTGAAAGAAGT+TGG + chr8_2:4737136-4737155 None:intergenic 30.0%
AAGGTGCATGTATATATTTG+GGG + chr8_2:4737310-4737329 None:intergenic 30.0%
CAAGGTGCATGTATATATTT+GGG + chr8_2:4737311-4737330 None:intergenic 30.0%
TCAAGGTGCATGTATATATT+TGG + chr8_2:4737312-4737331 None:intergenic 30.0%
! TTCTTTTTATCTCTCTCTCA+AGG + chr8_2:4737329-4737348 None:intergenic 30.0%
!!! ATGAGGTTTTGAATGAATGT+AGG - chr8_2:4737350-4737369 Msa1229120:intron 30.0%
TAAGAATCCATGAGGATATT+TGG + chr8_2:4737390-4737409 None:intergenic 30.0%
TGATAATAGTAAGGTGTGAT+AGG - chr8_2:4737459-4737478 Msa1229120:intron 30.0%
GTGATACTCCTAAGAAATAT+AGG + chr8_2:4737597-4737616 None:intergenic 30.0%
GAAATTAGAACACACTTACT+TGG - chr8_2:4737685-4737704 Msa1229120:intron 30.0%
!! CAAACTTAGGGTTTTTCAAT+GGG - chr8_2:4737771-4737790 Msa1229120:intron 30.0%
!! AAACTTAGGGTTTTTCAATG+GGG - chr8_2:4737772-4737791 Msa1229120:intron 30.0%
TTGTACGGTTATAAATAGAG+AGG + chr8_2:4737847-4737866 None:intergenic 30.0%
TTTGTGTAGAAACATAGTGT+AGG + chr8_2:4737906-4737925 None:intergenic 30.0%
!!! TCAATAGATAATGGGCTTTT+GGG + chr8_2:4737941-4737960 None:intergenic 30.0%
!!! ATCAATAGATAATGGGCTTT+TGG + chr8_2:4737942-4737961 None:intergenic 30.0%
CCTTGACAACATATTTGAAT+TGG + chr8_2:4738211-4738230 None:intergenic 30.0%
CCAATTCAAATATGTTGTCA+AGG - chr8_2:4738208-4738227 Msa1229120:intron 30.0%
!!! TAAGTCGGGTTTTAAAACTA+TGG - chr8_2:4738304-4738323 Msa1229120:intron 30.0%
ACATCATTTAGTGAGGATTT+CGG - chr8_2:4738490-4738509 Msa1229120:intron 30.0%
AACCAAAGTTACTTAGACTA+AGG - chr8_2:4738561-4738580 Msa1229120:intron 30.0%
ACCAAAGTTACTTAGACTAA+GGG - chr8_2:4738562-4738581 Msa1229120:intron 30.0%
GGGAATGGAACTAATAATTA+AGG - chr8_2:4738583-4738602 Msa1229120:intron 30.0%
CTTAATGAACCAATACAAAG+TGG - chr8_2:4738719-4738738 Msa1229120:intron 30.0%
CTTTAACCACAATCTTGTAA+TGG + chr8_2:4738816-4738835 None:intergenic 30.0%
TGTGGTTAAAGATATGTACT+TGG - chr8_2:4738825-4738844 Msa1229120:intron 30.0%
TAAAGATATGTACTTGGAAG+TGG - chr8_2:4738831-4738850 Msa1229120:intron 30.0%
TAACACTTAGCAGTACTATT+GGG + chr8_2:4739245-4739264 None:intergenic 30.0%
AAAATACTACCATATACCCA+AGG + chr8_2:4739302-4739321 None:intergenic 30.0%
! TATGGTAGTATTTTCACCTT+TGG - chr8_2:4739308-4739327 Msa1229120:intron 30.0%
TATATAAGTGGTACATCCAA+AGG + chr8_2:4739327-4739346 None:intergenic 30.0%
ATTATTAAGTCCTACATCCA+GGG + chr8_2:4739474-4739493 None:intergenic 30.0%
!!! TAAGGTTTTGAATCGAGATA+TGG + chr8_2:4739704-4739723 None:intergenic 30.0%
TGAGTGATTAAATATGTGAG+TGG + chr8_2:4739799-4739818 None:intergenic 30.0%
AAAATCTTACCGCACATATT+GGG + chr8_2:4739831-4739850 None:intergenic 30.0%
TAAAATCTTACCGCACATAT+TGG + chr8_2:4739832-4739851 None:intergenic 30.0%
! TTTTACTGAAACGACATTGT+TGG + chr8_2:4740148-4740167 None:intergenic 30.0%
TCTCAAGCTATCCATGAAAT+GGG - chr8_2:4734731-4734750 Msa1229120:three_prime_UTR 35.0%
TTGAGAAAGTTGAGAAGGTT+GGG + chr8_2:4734813-4734832 None:intergenic 35.0%
ATTGAGAAAGTTGAGAAGGT+TGG + chr8_2:4734814-4734833 None:intergenic 35.0%
AGAGATTGAGAAAGTTGAGA+AGG + chr8_2:4734818-4734837 None:intergenic 35.0%
! GTTCTGTCCTTTTCAATGTT+AGG - chr8_2:4735268-4735287 Msa1229120:intron 35.0%
GTATGATGATATATAGGTGG+AGG - chr8_2:4735704-4735723 Msa1229120:intron 35.0%
!! TGCTTGATGATGGTTACAAA+TGG - chr8_2:4735815-4735834 Msa1229120:intron 35.0%
!! TTGATGATGGTTACAAATGG+AGG - chr8_2:4735818-4735837 Msa1229120:intron 35.0%
! ACTTAACTTTTGTTCAACCG+CGG + chr8_2:4736005-4736024 None:intergenic 35.0%
TATCAAGGTTCATTTCCCTT+TGG - chr8_2:4736097-4736116 Msa1229120:intron 35.0%
!! TACATCAAAGGCATTATACC+CGG - chr8_2:4736711-4736730 Msa1229120:intron 35.0%
! TTTGGGAAAAATAAGGGTGT+CGG - chr8_2:4736757-4736776 Msa1229120:intron 35.0%
CTGACTATAGTGAAGATTGA+TGG - chr8_2:4736921-4736940 Msa1229120:intron 35.0%
GTGCTCTATAGTCAAAACTA+TGG + chr8_2:4737055-4737074 None:intergenic 35.0%
TTGACTATAGAGCACACTAT+AGG - chr8_2:4737060-4737079 Msa1229120:intron 35.0%
TGACTATAGAGCACACTATA+GGG - chr8_2:4737061-4737080 Msa1229120:intron 35.0%
! TGAAAGAAGTTGGGTGTTTT+GGG + chr8_2:4737126-4737145 None:intergenic 35.0%
GAAGACTTTGTCTTCAATCT+CGG + chr8_2:4737732-4737751 None:intergenic 35.0%
TTTCACATGCTCCAAACTTA+GGG - chr8_2:4737759-4737778 Msa1229120:intron 35.0%
CCATTGAAAAACCCTAAGTT+TGG + chr8_2:4737773-4737792 None:intergenic 35.0%
!! CCAAACTTAGGGTTTTTCAA+TGG - chr8_2:4737770-4737789 Msa1229120:intron 35.0%
ATTTATAACCGTACAACCCT+AGG - chr8_2:4737851-4737870 Msa1229120:intron 35.0%
!! TGATCCATTTGATGATGCTT+AGG + chr8_2:4737979-4737998 None:intergenic 35.0%
!!! CTGCAATCAATTGTTGGTTT+TGG + chr8_2:4738027-4738046 None:intergenic 35.0%
ATAATTTCGACTAGGCTCAA+TGG + chr8_2:4738100-4738119 None:intergenic 35.0%
TGAGCCTAGTCGAAATTATA+TGG - chr8_2:4738101-4738120 Msa1229120:intron 35.0%
AATTTCAAGGTCCATGTGAT+TGG - chr8_2:4738270-4738289 Msa1229120:intron 35.0%
!! GGCTTTGAAGCAAATGTATT+AGG - chr8_2:4738443-4738462 Msa1229120:intron 35.0%
ATTTAGTGAGGATTTCGGAT+AGG - chr8_2:4738495-4738514 Msa1229120:intron 35.0%
CCAAAGTTACTTAGACTAAG+GGG - chr8_2:4738563-4738582 Msa1229120:intron 35.0%
TGTTGATATTGTTGCCTTCA+TGG - chr8_2:4738666-4738685 Msa1229120:intron 35.0%
TAACCACAATCTTGTAATGG+TGG + chr8_2:4738813-4738832 None:intergenic 35.0%
ATGTACTTGGAAGTGGAATT+AGG - chr8_2:4738838-4738857 Msa1229120:intron 35.0%
! TACATTTTCAAACACCTCAC+CGG + chr8_2:4738937-4738956 None:intergenic 35.0%
! CGAGAGAACTTTTTATGAAG+AGG - chr8_2:4739001-4739020 Msa1229120:intron 35.0%
TACTCATTCACATGTGATGT+AGG - chr8_2:4739139-4739158 Msa1229120:CDS 35.0%
ATTCACATGTGATGTAGGTA+GGG - chr8_2:4739144-4739163 Msa1229120:CDS 35.0%
!!! TTTTTTGAGGTTCATGCCTT+GGG + chr8_2:4739213-4739232 None:intergenic 35.0%
!!! TTTTTTTGAGGTTCATGCCT+TGG + chr8_2:4739214-4739233 None:intergenic 35.0%
CTAACACTTAGCAGTACTAT+TGG + chr8_2:4739246-4739265 None:intergenic 35.0%
CAATAGTACTGCTAAGTGTT+AGG - chr8_2:4739244-4739263 Msa1229120:CDS 35.0%
! TGTTAGGTGAGTGTGTTTTT+GGG - chr8_2:4739260-4739279 Msa1229120:CDS 35.0%
!! TACAAGGTGTCGTATATAAG+TGG + chr8_2:4739339-4739358 None:intergenic 35.0%
TTGGGTATGTAGGTGAAAAA+AGG + chr8_2:4739429-4739448 None:intergenic 35.0%
GATTATTAAGTCCTACATCC+AGG + chr8_2:4739475-4739494 None:intergenic 35.0%
TTGTGTTTGATGTTTCTCTC+AGG + chr8_2:4739653-4739672 None:intergenic 35.0%
! CATTTGAAACCCAATATGTG+CGG - chr8_2:4739819-4739838 Msa1229120:intron 35.0%
ATGGTGATAACCACTTATGA+AGG - chr8_2:4740054-4740073 Msa1229120:CDS 35.0%
ATTATGTCTGCCTTCATAAG+TGG + chr8_2:4740067-4740086 None:intergenic 35.0%
GACATTGTTGGATCAAAAAG+AGG + chr8_2:4740136-4740155 None:intergenic 35.0%
CATTTCATGGATAGCTTGAG+AGG + chr8_2:4734732-4734751 None:intergenic 40.0%
CTCTCAAGCTATCCATGAAA+TGG - chr8_2:4734730-4734749 Msa1229120:three_prime_UTR 40.0%
TTGTCACTACTAGAACTCCT+TGG - chr8_2:4734924-4734943 Msa1229120:CDS 40.0%
TTCTCATCACTCACAGCTTT+GGG + chr8_2:4735412-4735431 None:intergenic 40.0%
ATTCTCATCACTCACAGCTT+TGG + chr8_2:4735413-4735432 None:intergenic 40.0%
TGCACTGGAAATACTAGTGA+TGG - chr8_2:4735433-4735452 Msa1229120:intron 40.0%
ATGATATATAGGTGGAGGAG+TGG - chr8_2:4735709-4735728 Msa1229120:intron 40.0%
CTTGTCTGGAAACAAAACCT+TGG + chr8_2:4735781-4735800 None:intergenic 40.0%
CATCTACATCACTTCTTGTC+TGG + chr8_2:4735795-4735814 None:intergenic 40.0%
GATGTAGATGTGCTTGATGA+TGG - chr8_2:4735805-4735824 Msa1229120:intron 40.0%
GGTTACAAATGGAGGAAGTA+TGG - chr8_2:4735826-4735845 Msa1229120:intron 40.0%
TCAAGAATAGCCTTCATCCA+AGG - chr8_2:4735860-4735879 Msa1229120:intron 40.0%
ATATAGGTTAGTACTAGCCG+CGG - chr8_2:4735985-4736004 Msa1229120:intron 40.0%
CGTTTCAACGAGGTTCAATT+CGG + chr8_2:4736053-4736072 None:intergenic 40.0%
AACTAACGATCGTTTCAACG+AGG + chr8_2:4736063-4736082 None:intergenic 40.0%
TCGTTGAAACGATCGTTAGT+TGG - chr8_2:4736062-4736081 Msa1229120:intron 40.0%
! GTTTAGAATTCAGACGTCTC+TGG - chr8_2:4736425-4736444 Msa1229120:intron 40.0%
AACAACGCCGCATCAATATA+TGG - chr8_2:4736512-4736531 Msa1229120:intron 40.0%
AACAACACCTATCGCTTTGA+AGG - chr8_2:4736542-4736561 Msa1229120:intron 40.0%
ACATTCTACCTTCATTCCTC+CGG + chr8_2:4736733-4736752 None:intergenic 40.0%
TCTCTCTAGTTGTGAGTGTT+TGG + chr8_2:4736825-4736844 None:intergenic 40.0%
TCTCTCCAGCTAAAACTGAA+AGG - chr8_2:4736860-4736879 Msa1229120:intron 40.0%
TCCAGCTAAAACTGAAAGGA+AGG - chr8_2:4736864-4736883 Msa1229120:intron 40.0%
!! TCCTTCCTTTCAGTTTTAGC+TGG + chr8_2:4736868-4736887 None:intergenic 40.0%
TGATGGTACAGACTGAACAT+TGG - chr8_2:4736938-4736957 Msa1229120:intron 40.0%
GATGGTACAGACTGAACATT+GGG - chr8_2:4736939-4736958 Msa1229120:intron 40.0%
ATGTACATAGGACAAAGGAG+TGG + chr8_2:4737097-4737116 None:intergenic 40.0%
! GTGAAAGAAGTTGGGTGTTT+TGG + chr8_2:4737127-4737146 None:intergenic 40.0%
ATTAGTGCACATCATGCACA+CGG + chr8_2:4737200-4737219 None:intergenic 40.0%
GTGCATGTATATATTTGGGG+TGG + chr8_2:4737307-4737326 None:intergenic 40.0%
TAGGTGTCCAAATATCCTCA+TGG - chr8_2:4737380-4737399 Msa1229120:intron 40.0%
ACACACTTACTTGGAAACCA+TGG - chr8_2:4737694-4737713 Msa1229120:intron 40.0%
! CTAAGTTTGGAGCATGTGAA+AGG + chr8_2:4737760-4737779 None:intergenic 40.0%
CTTTCACATGCTCCAAACTT+AGG - chr8_2:4737758-4737777 Msa1229120:intron 40.0%
CTGACTATTCTGCTCATTAG+CGG + chr8_2:4737802-4737821 None:intergenic 40.0%
AATAGTCAGAGTGATGGCAA+AGG - chr8_2:4737813-4737832 Msa1229120:intron 40.0%
ATAGTCAGAGTGATGGCAAA+GGG - chr8_2:4737814-4737833 Msa1229120:intron 40.0%
CGGTTATAAATAGAGAGGCT+AGG + chr8_2:4737842-4737861 None:intergenic 40.0%
ATAGTGTAGGCTCAAACACT+AGG + chr8_2:4737893-4737912 None:intergenic 40.0%
CGGACCATATAATTTCGACT+AGG + chr8_2:4738108-4738127 None:intergenic 40.0%
TTGGTCAGATCAGTCTAAGT+CGG - chr8_2:4738289-4738308 Msa1229120:intron 40.0%
CAAATGTATTAGGCTAGACG+TGG - chr8_2:4738453-4738472 Msa1229120:intron 40.0%
CCCCTTAGTCTAAGTAACTT+TGG + chr8_2:4738566-4738585 None:intergenic 40.0%
GTTACTTAGACTAAGGGGAA+TGG - chr8_2:4738568-4738587 Msa1229120:intron 40.0%
GCACTTCAACCACTTTGTAT+TGG + chr8_2:4738731-4738750 None:intergenic 40.0%
AGACCACCATTACAAGATTG+TGG - chr8_2:4738807-4738826 Msa1229120:intron 40.0%
GTTTAGGAACATTAACGTGC+CGG - chr8_2:4738915-4738934 Msa1229120:intron 40.0%
! TTCTCTCGATTGTTACTTGC+TGG + chr8_2:4738989-4739008 None:intergenic 40.0%
CATTCACATGTGATGTAGGT+AGG - chr8_2:4739143-4739162 Msa1229120:CDS 40.0%
TGCAAACCACTAAATGGAAC+TGG - chr8_2:4739182-4739201 Msa1229120:CDS 40.0%
GCAAACCACTAAATGGAACT+GGG - chr8_2:4739183-4739202 Msa1229120:CDS 40.0%
!!! TTTTTGAGGTTCATGCCTTG+GGG + chr8_2:4739212-4739231 None:intergenic 40.0%
! GTGTTAGGTGAGTGTGTTTT+TGG - chr8_2:4739259-4739278 Msa1229120:CDS 40.0%
! TTTGAGGTTCCTTGGGTATA+TGG - chr8_2:4739290-4739309 Msa1229120:intron 40.0%
!!! GTGGGAGTGGATTTTGTTTT+GGG + chr8_2:4739576-4739595 None:intergenic 40.0%
!! AGTGGGAGTGGATTTTGTTT+TGG + chr8_2:4739577-4739596 None:intergenic 40.0%
AACAAGTGATATCAAAGCCC+TGG + chr8_2:4739616-4739635 None:intergenic 40.0%
! AGGGCTTTGATATCACTTGT+TGG - chr8_2:4739615-4739634 Msa1229120:intron 40.0%
! GGGCTTTGATATCACTTGTT+GGG - chr8_2:4739616-4739635 Msa1229120:intron 40.0%
! GGCTTTGATATCACTTGTTG+GGG - chr8_2:4739617-4739636 Msa1229120:intron 40.0%
GCTGCACACATAACAATTGT+CGG - chr8_2:4739992-4740011 Msa1229120:intron 40.0%
CTGCACACATAACAATTGTC+GGG - chr8_2:4739993-4740012 Msa1229120:intron 40.0%
ACTCTCAGAAGATTGTCGTA+TGG - chr8_2:4740035-4740054 Msa1229120:intron 40.0%
GAAGAATTAGAGTCGTCACA+AGG + chr8_2:4740096-4740115 None:intergenic 40.0%
GAAGGTTGGGATTGTGTAGA+GGG + chr8_2:4734800-4734819 None:intergenic 45.0%
AGAAGGTTGGGATTGTGTAG+AGG + chr8_2:4734801-4734820 None:intergenic 45.0%
AACTCCTTGGAACAACGAAC+AGG - chr8_2:4734937-4734956 Msa1229120:CDS 45.0%
GTGAGTGATGAGAATTGCAC+TGG - chr8_2:4735418-4735437 Msa1229120:intron 45.0%
CTAGTGATGGCAACAACACA+TGG - chr8_2:4735446-4735465 Msa1229120:intron 45.0%
ATATATAGGTGGAGGAGTGG+AGG - chr8_2:4735712-4735731 Msa1229120:intron 45.0%
CCTTCATCCTTCAAAGCGAT+AGG + chr8_2:4736552-4736571 None:intergenic 45.0%
!! CCTATCGCTTTGAAGGATGA+AGG - chr8_2:4736549-4736568 Msa1229120:intron 45.0%
CGAGTACATGGCTACATCAA+AGG - chr8_2:4736699-4736718 Msa1229120:intron 45.0%
!! ATCAAAGGCATTATACCCGG+AGG - chr8_2:4736714-4736733 Msa1229120:intron 45.0%
CATTATACCCGGAGGAATGA+AGG - chr8_2:4736722-4736741 Msa1229120:intron 45.0%
CATTCTACCTTCATTCCTCC+GGG + chr8_2:4736732-4736751 None:intergenic 45.0%
AGGACAAAGGAGTGGAAAGA+GGG + chr8_2:4737089-4737108 None:intergenic 45.0%
TAGGACAAAGGAGTGGAAAG+AGG + chr8_2:4737090-4737109 None:intergenic 45.0%
TGTCATCGATGGTAGTTACG+CGG + chr8_2:4737497-4737516 None:intergenic 45.0%
!! TAGGAGTATCACCAGACACA+TGG - chr8_2:4737605-4737624 Msa1229120:intron 45.0%
!! AGGAGTATCACCAGACACAT+GGG - chr8_2:4737606-4737625 Msa1229120:intron 45.0%
TTCTTGATGTCCCATGTGTC+TGG + chr8_2:4737619-4737638 None:intergenic 45.0%
TACTTGGAAACCATGGTGAC+CGG - chr8_2:4737701-4737720 Msa1229120:intron 45.0%
TTGGAGCATGTGAAAGGCAA+AGG + chr8_2:4737754-4737773 None:intergenic 45.0%
GAGCAGAATAGTCAGAGTGA+TGG - chr8_2:4737807-4737826 Msa1229120:intron 45.0%
TAGTCAGAGTGATGGCAAAG+GGG - chr8_2:4737815-4737834 Msa1229120:intron 45.0%
TCAAACACTAGGCCCATGAT+GGG + chr8_2:4737882-4737901 None:intergenic 45.0%
AGGGCCTAAGCATCATCAAA+TGG - chr8_2:4737972-4737991 Msa1229120:intron 45.0%
! TGTGGGCTGCAATCAATTGT+TGG + chr8_2:4738033-4738052 None:intergenic 45.0%
GACTGATCTGACCAATCACA+TGG + chr8_2:4738284-4738303 None:intergenic 45.0%
TGGTCAGATCAGTCTAAGTC+GGG - chr8_2:4738290-4738309 Msa1229120:intron 45.0%
!!! TAGGTGAGTGTGTTTTTGGG+AGG - chr8_2:4739263-4739282 Msa1229120:intron 45.0%
!!! TGAGTGTGTTTTTGGGAGGA+TGG - chr8_2:4739267-4739286 Msa1229120:intron 45.0%
!! GTTTTTGGGAGGATGGTTTG+AGG - chr8_2:4739274-4739293 Msa1229120:intron 45.0%
! AGGATGGTTTGAGGTTCCTT+GGG - chr8_2:4739283-4739302 Msa1229120:intron 45.0%
! ATATGGCGTGTCACCTCTTT+TGG + chr8_2:4739687-4739706 None:intergenic 45.0%
GTGTCGCATCGCCTATAAAT+AGG + chr8_2:4739772-4739791 None:intergenic 45.0%
!!! AAAACATTTTTATTTTATTA+CGG - chr8_2:4739402-4739421 Msa1229120:intron 5.0%
AGCCACGGTAGTAGTTGTGA+CGG + chr8_2:4734882-4734901 None:intergenic 50.0%
TCCTTGGAACAACGAACAGG+TGG - chr8_2:4734940-4734959 Msa1229120:CDS 50.0%
ACCACCTGTTCGTTGTTCCA+AGG + chr8_2:4734944-4734963 None:intergenic 50.0%
AGAAGAGCAAGGCGAAAGTG+AGG - chr8_2:4735740-4735759 Msa1229120:intron 50.0%
GGAGGAAACTTAGAGAGCCA+AGG - chr8_2:4735761-4735780 Msa1229120:intron 50.0%
GGACAAAGGAGTGGAAAGAG+GGG + chr8_2:4737088-4737107 None:intergenic 50.0%
GTCTTCAATCTCGGCGAATC+CGG + chr8_2:4737723-4737742 None:intergenic 50.0%
CTCAAACACTAGGCCCATGA+TGG + chr8_2:4737883-4737902 None:intergenic 50.0%
ACATGTGATGTAGGTAGGGC+CGG - chr8_2:4739148-4739167 Msa1229120:CDS 50.0%
! TTAGTGGTTTGCACACCCCA+AGG + chr8_2:4739175-4739194 None:intergenic 50.0%
GGGGTGTGCAAACCACTAAA+TGG - chr8_2:4739176-4739195 Msa1229120:CDS 50.0%
! GAGGATGGTTTGAGGTTCCT+TGG - chr8_2:4739282-4739301 Msa1229120:intron 50.0%
GTTCAGCTTAGTGGAGGAGT+GGG + chr8_2:4739594-4739613 None:intergenic 50.0%
TCCTCCACTAAGCTGAACCA+GGG - chr8_2:4739596-4739615 Msa1229120:intron 50.0%
AAAGCCCTGGTTCAGCTTAG+TGG + chr8_2:4739603-4739622 None:intergenic 50.0%
TGATGTTTCTCTCAGGCCCT+CGG + chr8_2:4739646-4739665 None:intergenic 50.0%
!! TAGTGGCGTTGGTGGTGCTA+CGG + chr8_2:4734850-4734869 None:intergenic 55.0%
AGTAGTTGTGACGGCTGCAC+CGG + chr8_2:4734873-4734892 None:intergenic 55.0%
AGCCGTCACAACTACTACCG+TGG - chr8_2:4734877-4734896 Msa1229120:CDS 55.0%
ACAACTACTACCGTGGCTGC+CGG - chr8_2:4734884-4734903 Msa1229120:CDS 55.0%
ATGGCTAAATCCGGCAGCCA+CGG + chr8_2:4734897-4734916 None:intergenic 55.0%
TGGAGGAGCAGAGAAGAGCA+AGG - chr8_2:4735729-4735748 Msa1229120:intron 55.0%
AGAGCAAGGCGAAAGTGAGG+AGG - chr8_2:4735743-4735762 Msa1229120:intron 55.0%
! AACACTAGGCCCATGATGGG+TGG + chr8_2:4737879-4737898 None:intergenic 55.0%
! GGAACATTAACGTGCCGGTG+AGG - chr8_2:4738920-4738939 Msa1229120:intron 55.0%
GGAGGCCCAGTTCCATTTAG+TGG + chr8_2:4739191-4739210 None:intergenic 55.0%
TTGAGGTTCATGCCTTGGGG+AGG + chr8_2:4739209-4739228 None:intergenic 55.0%
CACCTACATACCCAAGCCTC+CGG - chr8_2:4739434-4739453 Msa1229120:intron 55.0%
ATCCGGAGGCTTGGGTATGT+AGG + chr8_2:4739439-4739458 None:intergenic 55.0%
TCCTACGAATCCGGAGGCTT+GGG + chr8_2:4739447-4739466 None:intergenic 55.0%
TTCCTACGAATCCGGAGGCT+TGG + chr8_2:4739448-4739467 None:intergenic 55.0%
AGCCTCCGGATTCGTAGGAA+CGG - chr8_2:4739448-4739467 Msa1229120:intron 55.0%
GGTTCAGCTTAGTGGAGGAG+TGG + chr8_2:4739595-4739614 None:intergenic 55.0%
CTCCTCCACTAAGCTGAACC+AGG - chr8_2:4739595-4739614 Msa1229120:intron 55.0%
! ATCACTTGTTGGGGAGTCCG+AGG - chr8_2:4739626-4739645 Msa1229120:intron 55.0%
! TCACTTGTTGGGGAGTCCGA+GGG - chr8_2:4739627-4739646 Msa1229120:intron 55.0%
AGCACCACCAACGCCACTAC+CGG - chr8_2:4734851-4734870 Msa1229120:exon 60.0%
GGGTGGTGCCTAGGGTTGTA+CGG + chr8_2:4737862-4737881 None:intergenic 60.0%
ACCCTAGGCACCACCCATCA+TGG - chr8_2:4737866-4737885 Msa1229120:intron 60.0%
!! CCCATGATGGGTGGTGCCTA+GGG + chr8_2:4737870-4737889 None:intergenic 60.0%
CCCTAGGCACCACCCATCAT+GGG - chr8_2:4737867-4737886 Msa1229120:intron 60.0%
ATGTAGGTAGGGCCGGACCT+TGG - chr8_2:4739155-4739174 Msa1229120:CDS 60.0%
TGTAGGTAGGGCCGGACCTT+GGG - chr8_2:4739156-4739175 Msa1229120:CDS 60.0%
GGTTTGCACACCCCAAGGTC+CGG + chr8_2:4739170-4739189 None:intergenic 60.0%
AATGGAACTGGGCCTCCCCA+AGG - chr8_2:4739194-4739213 Msa1229120:CDS 60.0%
ACCCAAGCCTCCGGATTCGT+AGG - chr8_2:4739443-4739462 Msa1229120:intron 60.0%
CAGGGCCGTTCCTACGAATC+CGG + chr8_2:4739456-4739475 None:intergenic 60.0%
GTAGGAACGGCCCTGGATGT+AGG - chr8_2:4739461-4739480 Msa1229120:intron 60.0%
GCTTAGTGGAGGAGTGGGAG+TGG + chr8_2:4739589-4739608 None:intergenic 60.0%
GCCCTGGTTCAGCTTAGTGG+AGG + chr8_2:4739600-4739619 None:intergenic 60.0%
! TGCACCGGTAGTGGCGTTGG+TGG + chr8_2:4734858-4734877 None:intergenic 65.0%
! TGTGACGGCTGCACCGGTAG+TGG + chr8_2:4734867-4734886 None:intergenic 65.0%
CTCGGCGAATCCGGTCACCA+TGG + chr8_2:4737714-4737733 None:intergenic 65.0%
!! GCCCATGATGGGTGGTGCCT+AGG + chr8_2:4737871-4737890 None:intergenic 65.0%
GTAGGTAGGGCCGGACCTTG+GGG - chr8_2:4739157-4739176 Msa1229120:CDS 65.0%
GGCCGTTCCTACGAATCCGG+AGG + chr8_2:4739453-4739472 None:intergenic 65.0%
CGGATTCGTAGGAACGGCCC+TGG - chr8_2:4739454-4739473 Msa1229120:intron 65.0%
!! GGCGTTGGTGGTGCTACGGC+CGG + chr8_2:4734846-4734865 None:intergenic 70.0%
! GGCTGCACCGGTAGTGGCGT+TGG + chr8_2:4734861-4734880 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 4734674 4740326 4734674 ID=Msa1229120;Name=Msa1229120
chr8_2 mRNA 4734674 4740326 4734674 ID=Msa1229120-mRNA-1;Parent=Msa1229120;Name=Msa1229120-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.75|0.6|1|0.5|0.2|5|183|221
chr8_2 exon 4734674 4735019 4734674 ID=Msa1229120-mRNA-1:exon:1605;Parent=Msa1229120-mRNA-1
chr8_2 exon 4739119 4739280 4739119 ID=Msa1229120-mRNA-1:exon:1604;Parent=Msa1229120-mRNA-1
chr8_2 exon 4739533 4739606 4739533 ID=Msa1229120-mRNA-1:exon:1603;Parent=Msa1229120-mRNA-1
chr8_2 exon 4740042 4740229 4740042 ID=Msa1229120-mRNA-1:exon:1602;Parent=Msa1229120-mRNA-1
chr8_2 exon 4740248 4740326 4740248 ID=Msa1229120-mRNA-1:exon:1601;Parent=Msa1229120-mRNA-1
chr8_2 CDS 4740248 4740326 4740248 ID=Msa1229120-mRNA-1:cds;Parent=Msa1229120-mRNA-1
chr8_2 CDS 4740042 4740229 4740042 ID=Msa1229120-mRNA-1:cds;Parent=Msa1229120-mRNA-1
chr8_2 CDS 4739533 4739606 4739533 ID=Msa1229120-mRNA-1:cds;Parent=Msa1229120-mRNA-1
chr8_2 CDS 4739119 4739280 4739119 ID=Msa1229120-mRNA-1:cds;Parent=Msa1229120-mRNA-1
chr8_2 CDS 4734857 4735019 4734857 ID=Msa1229120-mRNA-1:cds;Parent=Msa1229120-mRNA-1
chr8_2 three_prime_UTR 4734674 4734856 4734674 ID=Msa1229120-mRNA-1:three_prime_utr;Parent=Msa1229120-mRNA-1
Gene Sequence

>Msa1229120

ATGGAAGGAGAAAGAGATGTTCCCAATTATGATCTCCAAGTTTCATTCACAAATACCTCTCAAGCTATCCATGAAATGGAAAATCAAGTTCTTAGCTTCTTGTCACCCTCTACACAATCCCAACCTTCTCAACTTTCTCAATCTCTAAATTCCGGCCGTAGCACCACCAACGCCACTACCGGTGCAGCCGTCACAACTACTACCGTGGCTGCCGGATTTAGCCATAATGATCTTGTCACTACTAGAACTCCTTGGAACAACGAACAGGTGAGAACTCTAGATCCCAAAGCTGTGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGAGCAGAGAAGAGCAAGGCGAAAGTGAGGAGGAAACTTAGAGAGCCAAGGTTTTGTTTCCAGACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTATCGCTGCACACATAACAATTGTCGGGTAAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTGATAACCACTTATGAAGGCAGACATAATCACTCTCCTTGTGACGACTCTAATTCTTCTGAACACGAATGTTTTACCTCTTTTTGA
Protein sequence

>Msa1229120

MEGERDVPNYDLQVSFTNTSQAIHEMENQVLSFLSPSTQSQPSQLSQSLNSGRSTTNATTGAAVTTTTVAAGFSHNDLVTTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGAEKSKAKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF*