AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1309180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1309180 MtrunA17_Chr8g0335811 98.238 227 4 0 1 227 1 227 7.42e-171 469
Msa1309180 MtrunA17_Chr8g0383351 45.161 217 107 4 16 220 10 226 7.85e-46 152
Msa1309180 MtrunA17_Chr3g0129361 79.762 84 17 0 137 220 127 210 2.18e-45 150
Msa1309180 MtrunA17_Chr5g0432161 60.870 92 34 1 121 210 386 477 8.72e-34 127
Msa1309180 MtrunA17_Chr5g0432161 59.649 57 22 1 154 210 244 299 8.44e-16 75.9
Msa1309180 MtrunA17_Chr7g0248721 64.286 84 28 2 131 214 118 199 1.41e-33 120
Msa1309180 MtrunA17_Chr5g0418781 66.265 83 28 0 128 210 98 180 2.32e-33 121
Msa1309180 MtrunA17_Chr2g0294231 71.233 73 21 0 138 210 187 259 1.52e-31 118
Msa1309180 MtrunA17_Chr3g0079691 63.529 85 29 1 126 210 469 551 4.42e-31 120
Msa1309180 MtrunA17_Chr3g0079691 61.404 57 21 1 154 210 280 335 1.33e-17 81.3
Msa1309180 MtrunA17_Chr7g0218081 60.465 86 34 0 134 219 390 475 5.20e-31 119
Msa1309180 MtrunA17_Chr7g0218081 63.158 57 20 1 154 210 228 283 1.33e-18 84.0
Msa1309180 MtrunA17_Chr3g0106491 58.696 92 36 1 121 210 330 421 8.27e-31 118
Msa1309180 MtrunA17_Chr3g0106491 52.113 71 29 2 144 210 184 253 6.24e-17 79.0
Msa1309180 MtrunA17_Chr1g0194481 62.651 83 31 0 128 210 132 214 9.62e-31 115
Msa1309180 MtrunA17_Chr4g0051881 71.831 71 20 0 140 210 164 234 9.93e-31 115
Msa1309180 MtrunA17_Chr7g0224801 61.250 80 31 0 142 221 81 160 1.17e-30 111
Msa1309180 MtrunA17_Chr5g0445311 61.538 78 30 0 133 210 343 420 2.08e-30 117
Msa1309180 MtrunA17_Chr5g0445311 46.067 89 47 1 129 217 175 262 4.84e-16 76.6
Msa1309180 MtrunA17_Chr3g0101131 62.821 78 29 0 133 210 394 471 3.22e-30 117
Msa1309180 MtrunA17_Chr3g0101131 59.649 57 22 1 154 210 243 298 2.37e-16 77.4
Msa1309180 MtrunA17_Chr5g0418191 60.000 85 33 1 135 218 301 385 1.23e-29 114
Msa1309180 MtrunA17_Chr5g0418191 63.158 57 20 1 154 210 151 206 2.63e-17 80.1
Msa1309180 MtrunA17_Chr7g0249311 61.842 76 29 0 135 210 373 448 2.68e-29 115
Msa1309180 MtrunA17_Chr7g0249311 62.069 58 21 1 154 211 179 235 2.14e-18 83.6
Msa1309180 MtrunA17_Chr5g0443131 67.606 71 23 0 140 210 143 213 3.10e-29 111
Msa1309180 MtrunA17_Chr7g0249301 62.338 77 29 0 134 210 272 348 3.63e-29 112
Msa1309180 MtrunA17_Chr7g0249301 57.627 59 24 1 153 211 61 118 1.33e-15 74.7
Msa1309180 MtrunA17_Chr8g0386241 36.184 152 86 3 84 227 27 175 5.44e-29 107
Msa1309180 MtrunA17_Chr7g0270191 60.241 83 33 0 128 210 119 201 9.61e-29 109
Msa1309180 MtrunA17_Chr4g0004911 60.526 76 30 0 135 210 317 392 1.33e-28 112
Msa1309180 MtrunA17_Chr4g0004911 56.140 57 25 0 154 210 184 240 5.62e-16 76.3
Msa1309180 MtrunA17_Chr4g0042831 57.647 85 35 1 135 218 259 343 1.68e-28 110
Msa1309180 MtrunA17_Chr4g0042831 56.140 57 25 0 154 210 145 201 4.87e-15 73.2
Msa1309180 MtrunA17_Chr4g0068541 65.753 73 25 0 138 210 192 264 2.09e-28 110
Msa1309180 MtrunA17_Chr7g0243891 57.500 80 34 0 131 210 351 430 3.86e-28 111
Msa1309180 MtrunA17_Chr7g0243891 57.895 57 23 1 154 210 216 271 2.14e-15 74.7
Msa1309180 MtrunA17_Chr3g0129321 61.842 76 28 1 140 214 104 179 7.01e-28 105
Msa1309180 MtrunA17_Chr1g0150801 57.143 77 32 1 134 210 83 158 1.64e-26 100
Msa1309180 MtrunA17_Chr8g0383251 48.980 98 44 2 113 210 73 164 3.35e-25 97.4
Msa1309180 MtrunA17_Chr7g0263531 58.108 74 31 0 137 210 344 417 1.33e-24 100
Msa1309180 MtrunA17_Chr7g0263531 62.500 56 20 1 155 210 190 244 1.35e-16 77.8
Msa1309180 MtrunA17_Chr1g0188941 56.579 76 33 0 135 210 32 107 4.23e-24 92.8
Msa1309180 MtrunA17_Chr5g0447701 52.703 74 35 0 139 212 237 310 9.47e-22 92.4
Msa1309180 MtrunA17_Chr5g0447701 50.746 67 31 2 152 218 90 154 3.01e-12 65.1
Msa1309180 MtrunA17_Chr4g0074001 49.315 73 37 0 138 210 343 415 1.40e-20 89.7
Msa1309180 MtrunA17_Chr1g0189391 48.101 79 40 1 141 218 84 162 1.65e-20 88.2
Msa1309180 MtrunA17_Chr7g0238921 51.190 84 37 1 127 210 101 180 3.66e-20 87.0
Msa1309180 MtrunA17_Chr4g0060271 50.667 75 36 1 138 211 239 313 5.24e-20 88.2
Msa1309180 MtrunA17_Chr7g0270831 41.228 114 54 3 108 210 162 273 2.17e-19 85.9
Msa1309180 MtrunA17_Chr2g0288871 45.122 82 44 1 130 210 281 362 2.23e-19 86.3
Msa1309180 MtrunA17_Chr3g0139021 30.890 191 100 9 39 217 210 380 4.30e-19 84.7
Msa1309180 MtrunA17_Chr4g0075201 45.122 82 44 1 130 210 243 324 7.60e-19 84.7
Msa1309180 MtrunA17_Chr3g0099641 46.053 76 40 1 137 211 234 309 8.15e-19 84.3
Msa1309180 MtrunA17_Chr4g0053281 44.578 83 42 2 130 211 245 324 9.87e-19 83.2
Msa1309180 MtrunA17_Chr6g0485431 47.222 72 37 1 140 210 140 211 1.71e-18 82.8
Msa1309180 MtrunA17_Chr2g0322391 47.368 76 39 1 137 211 332 407 1.77e-18 83.6
Msa1309180 MtrunA17_Chr1g0147881 44.186 86 44 2 127 211 238 320 4.05e-18 81.6
Msa1309180 MtrunA17_Chr4g0025061 46.835 79 41 1 133 210 339 417 1.43e-17 80.9
Msa1309180 MtrunA17_Chr5g0401821 42.529 87 46 2 126 211 174 257 4.28e-17 77.8
Msa1309180 MtrunA17_Chr4g0051181 47.297 74 38 1 138 210 227 300 6.80e-17 79.0
Msa1309180 MtrunA17_Chr7g0216891 47.887 71 36 1 141 210 206 276 7.25e-17 79.0
Msa1309180 MtrunA17_Chr4g0071521 39.080 87 49 2 126 211 220 303 1.75e-16 76.6
Msa1309180 MtrunA17_Chr2g0333851 39.130 115 61 3 105 210 112 226 1.81e-16 76.6
Msa1309180 MtrunA17_Chr3g0136961 51.667 60 28 1 153 211 137 196 1.97e-16 76.3
Msa1309180 MtrunA17_Chr2g0302391 48.649 74 37 1 138 210 195 268 2.54e-16 77.0
Msa1309180 MtrunA17_Chr1g0184691 42.169 83 44 2 130 211 272 351 4.67e-16 75.9
Msa1309180 MtrunA17_Chr1g0150281 52.632 57 26 1 155 210 141 197 5.58e-16 75.1
Msa1309180 MtrunA17_Chr3g0126391 54.237 59 24 1 153 208 132 190 1.30e-15 74.7
Msa1309180 MtrunA17_Chr4g0001361 50.000 60 29 1 152 210 160 219 2.55e-15 73.6
Msa1309180 MtrunA17_Chr5g0447711 44.595 74 41 0 139 212 215 288 2.66e-15 73.6
Msa1309180 MtrunA17_Chr7g0228941 44.000 75 40 2 143 216 42 115 3.52e-15 69.7
Msa1309180 MtrunA17_Chr4g0025051 47.887 71 36 1 141 210 322 392 1.25e-14 72.4
Msa1309180 MtrunA17_Chr5g0432071 32.639 144 76 4 70 210 34 159 2.42e-14 69.3
Msa1309180 MtrunA17_Chr1g0150271 45.000 60 32 1 152 210 99 158 2.62e-14 70.1
Msa1309180 MtrunA17_Chr7g0270051 54.386 57 25 1 155 210 54 110 1.13e-13 68.6
Msa1309180 MtrunA17_Chr2g0293481 33.065 124 73 3 97 210 201 324 1.33e-13 69.3
Msa1309180 MtrunA17_Chr8g0387981 40.000 90 46 2 127 208 100 189 1.76e-13 68.6
Msa1309180 MtrunA17_Chr2g0289181 50.000 58 28 1 155 211 15 72 2.24e-13 67.0
Msa1309180 MtrunA17_Chr8g0348311 42.308 78 42 3 134 210 137 212 3.18e-13 67.8
Msa1309180 MtrunA17_Chr8g0379461 50.000 58 28 1 155 211 77 134 4.31e-13 66.6
Msa1309180 MtrunA17_Chr7g0244981 50.000 58 26 1 154 208 122 179 8.87e-13 66.2
Msa1309180 MtrunA17_Chr2g0284321 48.276 58 29 1 155 211 36 93 1.01e-12 65.1
Msa1309180 MtrunA17_Chr8g0387501 49.153 59 29 1 153 210 128 186 1.44e-12 65.5
Msa1309180 MtrunA17_Chr7g0275531 45.070 71 36 1 141 208 105 175 1.87e-12 65.5
Msa1309180 MtrunA17_Chr2g0315361 35.714 98 57 2 114 208 111 205 1.87e-12 65.5
Msa1309180 MtrunA17_Chr2g0315381 38.144 97 54 3 115 208 108 201 2.04e-12 65.1
Msa1309180 MtrunA17_Chr7g0244971 33.813 139 62 6 113 227 73 205 3.42e-12 64.3
Msa1309180 MtrunA17_Chr1g0202461 39.241 79 46 2 134 211 242 319 3.48e-12 65.1
Msa1309180 MtrunA17_Chr7g0248691 41.573 89 47 3 124 210 126 211 4.97e-12 64.3
Msa1309180 MtrunA17_Chr2g0319961 37.895 95 48 3 127 211 45 138 1.36e-11 62.4
Msa1309180 MtrunA17_Chr8g0334541 44.776 67 31 2 154 217 103 166 1.45e-11 62.4
Msa1309180 MtrunA17_Chr8g0347251 45.763 59 29 1 153 208 135 193 3.22e-11 62.0
Msa1309180 MtrunA17_Chr8g0350621 44.828 58 29 1 154 208 111 168 5.78e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1309180 AT2G44745.1 58.547 234 68 9 3 227 5 218 6.86e-74 223
Msa1309180 AT4G39410.1 75.000 96 20 1 130 221 199 294 2.01e-45 153
Msa1309180 AT2G46130.1 65.432 81 27 1 135 215 11 90 3.40e-35 121
Msa1309180 AT1G69310.4 66.265 83 28 0 128 210 121 203 8.49e-35 125
Msa1309180 AT1G69310.2 66.265 83 28 0 128 210 121 203 8.49e-35 125
Msa1309180 AT1G69310.1 66.265 83 28 0 128 210 121 203 8.49e-35 125
Msa1309180 AT1G64000.1 64.706 85 29 1 130 214 90 173 1.03e-33 120
Msa1309180 AT5G41570.1 60.000 90 35 1 125 214 69 157 1.61e-33 119
Msa1309180 AT4G18170.1 65.060 83 29 0 128 210 146 228 1.64e-31 117
Msa1309180 AT4G26640.5 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1309180 AT4G26640.5 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1309180 AT4G26640.6 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1309180 AT4G26640.6 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1309180 AT4G26640.4 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1309180 AT4G26640.4 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1309180 AT4G26640.3 55.914 93 41 0 135 227 186 278 4.74e-31 117
Msa1309180 AT4G26640.3 59.322 59 23 1 152 210 33 90 4.50e-16 76.6
Msa1309180 AT5G56270.1 67.105 76 25 0 135 210 468 543 6.01e-31 120
Msa1309180 AT5G56270.1 59.649 57 22 1 154 210 273 328 7.15e-17 79.3
Msa1309180 AT4G26640.7 55.914 93 41 0 135 227 322 414 8.51e-31 119
Msa1309180 AT4G26640.7 59.322 59 23 1 152 210 169 226 2.32e-16 77.8
Msa1309180 AT3G01080.2 65.789 76 26 0 135 210 325 400 8.57e-31 118
Msa1309180 AT3G01080.2 59.649 57 22 1 154 210 205 260 5.67e-17 79.3
Msa1309180 AT4G26640.1 55.914 93 41 0 135 227 290 382 9.44e-31 118
Msa1309180 AT4G26640.1 59.322 59 23 1 152 210 137 194 3.08e-16 77.4
Msa1309180 AT2G38470.1 65.789 76 26 0 135 210 343 418 1.26e-30 118
Msa1309180 AT2G38470.1 57.895 57 23 1 154 210 184 239 8.13e-15 73.2
Msa1309180 AT5G13080.1 55.435 92 36 1 141 227 54 145 1.31e-30 110
Msa1309180 AT4G26640.2 55.914 93 41 0 135 227 362 454 1.32e-30 118
Msa1309180 AT4G26640.2 59.322 59 23 1 152 210 209 266 2.47e-16 77.8
Msa1309180 AT3G01080.1 65.789 76 26 0 135 210 287 362 1.65e-30 117
Msa1309180 AT3G01080.1 59.649 57 22 1 154 210 167 222 1.12e-16 78.6
Msa1309180 AT5G49520.1 69.863 73 22 0 138 210 205 277 1.98e-30 116
Msa1309180 AT2G30250.1 58.427 89 37 0 122 210 296 384 4.62e-30 115
Msa1309180 AT2G30250.1 44.737 76 36 2 135 210 152 221 8.82e-13 67.0
Msa1309180 AT5G26170.1 67.606 71 23 0 141 211 100 170 4.76e-30 110
Msa1309180 AT1G13960.1 57.647 85 36 0 126 210 381 465 7.50e-30 116
Msa1309180 AT1G13960.1 61.017 59 22 1 154 212 229 286 2.24e-17 80.9
Msa1309180 AT1G13960.2 57.647 85 36 0 126 210 228 312 1.04e-29 114
Msa1309180 AT1G13960.2 61.017 59 22 1 154 212 76 133 6.33e-17 79.0
Msa1309180 AT2G46130.2 60.494 81 27 2 135 215 11 86 1.24e-29 107
Msa1309180 AT1G29860.1 67.123 73 24 0 138 210 120 192 2.98e-29 110
Msa1309180 AT1G69310.3 61.446 83 28 1 128 210 121 199 3.49e-29 110
Msa1309180 AT5G07100.2 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1309180 AT5G07100.2 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1309180 AT5G07100.4 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1309180 AT5G07100.4 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1309180 AT5G07100.5 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1309180 AT5G07100.5 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1309180 AT5G07100.3 51.515 99 48 0 112 210 99 197 3.51e-29 109
Msa1309180 AT5G07100.3 56.140 57 25 0 154 210 24 80 1.80e-15 72.8
Msa1309180 AT5G07100.1 51.515 99 48 0 112 210 192 290 3.90e-29 111
Msa1309180 AT5G07100.1 56.140 57 25 0 154 210 117 173 1.33e-15 74.7
Msa1309180 AT4G26440.1 49.219 128 50 2 106 219 311 437 4.52e-29 114
Msa1309180 AT4G26440.1 60.345 58 22 1 154 211 178 234 2.52e-17 80.9
Msa1309180 AT2G03340.1 60.000 80 32 0 131 210 392 471 8.71e-29 113
Msa1309180 AT2G03340.1 63.158 57 20 1 154 210 250 305 4.94e-17 79.7
Msa1309180 AT2G47260.1 60.241 83 33 0 128 210 148 230 6.98e-28 108
Msa1309180 AT5G46350.1 66.197 71 24 0 140 210 169 239 1.27e-27 107
Msa1309180 AT3G01970.1 58.025 81 34 0 141 221 52 132 4.28e-27 101
Msa1309180 AT5G64810.1 61.429 70 27 0 141 210 97 166 8.26e-27 102
Msa1309180 AT3G62340.1 59.756 82 31 1 129 210 95 174 2.62e-24 97.8
Msa1309180 AT2G04880.2 49.438 89 45 0 122 210 251 339 4.45e-24 99.8
Msa1309180 AT2G04880.2 57.627 59 24 1 152 210 109 166 1.01e-15 75.9
Msa1309180 AT2G04880.1 49.438 89 45 0 122 210 275 363 5.90e-24 99.8
Msa1309180 AT2G04880.1 57.627 59 24 1 152 210 109 166 1.19e-15 75.9
Msa1309180 AT1G55600.1 57.143 70 30 0 141 210 294 363 2.54e-23 97.8
Msa1309180 AT2G37260.2 66.667 60 20 0 151 210 264 323 4.27e-23 95.9
Msa1309180 AT2G37260.2 61.404 57 21 1 155 211 84 139 2.79e-15 73.9
Msa1309180 AT2G37260.3 66.667 60 20 0 151 210 266 325 4.42e-23 95.9
Msa1309180 AT2G37260.3 61.404 57 21 1 155 211 86 141 2.61e-15 74.3
Msa1309180 AT2G37260.1 66.667 60 20 0 151 210 346 405 6.66e-23 96.3
Msa1309180 AT2G37260.1 61.404 57 21 1 155 211 166 221 2.20e-15 74.7
Msa1309180 AT5G15130.2 44.444 90 49 1 123 211 154 243 6.66e-21 90.9
Msa1309180 AT2G21900.1 44.444 90 47 1 124 210 76 165 7.27e-21 87.0
Msa1309180 AT5G15130.1 44.444 90 49 1 123 211 196 285 9.06e-21 90.5
Msa1309180 AT4G30935.1 51.429 70 34 0 141 210 318 387 4.07e-20 88.6
Msa1309180 AT4G04450.2 38.983 118 58 3 100 210 145 255 5.19e-20 88.2
Msa1309180 AT2G23320.1 38.760 129 70 3 84 211 178 298 9.74e-20 86.3
Msa1309180 AT4G04450.1 38.983 118 58 3 100 210 239 349 2.04e-19 86.7
Msa1309180 AT1G62300.1 49.333 75 37 1 137 210 295 369 5.63e-19 85.5
Msa1309180 AT5G28650.1 40.000 105 57 3 108 211 221 320 6.27e-19 84.3
Msa1309180 AT4G24240.1 39.796 98 55 2 126 222 256 350 6.35e-19 84.3
Msa1309180 AT4G22070.4 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1309180 AT4G22070.3 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1309180 AT4G22070.2 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1309180 AT4G22070.1 49.333 75 37 1 137 210 280 354 8.67e-19 84.7
Msa1309180 AT3G04670.1 39.423 104 57 3 109 211 222 320 5.27e-18 81.6
Msa1309180 AT2G30590.1 46.512 86 42 2 126 210 288 370 6.45e-18 81.6
Msa1309180 AT4G31550.2 44.706 85 43 2 127 210 221 302 9.14e-18 80.9
Msa1309180 AT3G01080.3 59.649 57 22 1 154 210 205 260 9.23e-18 80.9
Msa1309180 AT4G01720.1 50.000 74 36 1 138 210 223 296 1.32e-17 81.3
Msa1309180 AT5G43290.1 50.704 71 34 1 141 210 100 170 1.92e-17 79.3
Msa1309180 AT4G31550.1 45.122 82 41 2 130 210 225 303 2.60e-17 79.7
Msa1309180 AT1G18860.1 46.667 75 39 1 137 210 222 296 3.09e-17 80.5
Msa1309180 AT2G24570.1 45.122 82 41 2 130 210 222 300 5.03e-17 79.0
Msa1309180 AT2G25000.2 47.761 67 33 2 147 211 95 161 7.58e-17 77.0
Msa1309180 AT2G25000.4 47.761 67 33 2 147 211 95 161 7.58e-17 77.0
Msa1309180 AT2G25000.3 47.761 67 33 2 147 211 117 183 1.19e-16 76.6
Msa1309180 AT1G68150.1 48.649 74 37 1 138 210 219 292 1.66e-16 77.8
Msa1309180 AT2G25000.1 47.761 67 33 2 147 211 138 204 1.85e-16 76.6
Msa1309180 AT4G31800.2 50.847 59 28 1 153 210 110 168 2.08e-16 75.9
Msa1309180 AT4G31800.1 50.847 59 28 1 153 210 175 233 3.96e-16 76.3
Msa1309180 AT1G80840.1 51.667 60 28 1 152 210 144 203 5.92e-16 75.5
Msa1309180 AT4G01250.1 41.111 90 49 3 122 210 99 185 2.01e-15 73.9
Msa1309180 AT1G69810.2 43.421 76 41 2 137 210 128 203 1.01e-13 69.7
Msa1309180 AT2G34830.2 30.857 175 90 7 50 210 124 281 1.08e-13 69.7
Msa1309180 AT2G34830.1 30.857 175 90 7 50 210 115 272 1.13e-13 69.7
Msa1309180 AT1G69810.1 43.421 76 41 2 137 210 186 261 1.28e-13 69.7
Msa1309180 AT1G29280.1 44.615 65 35 1 147 210 67 131 2.43e-13 67.8
Msa1309180 AT4G12020.4 51.667 60 28 1 153 212 467 525 5.10e-13 68.6
Msa1309180 AT4G12020.4 70.000 40 12 0 135 174 622 661 8.62e-12 64.7
Msa1309180 AT4G12020.10 51.667 60 28 1 153 212 467 525 5.14e-13 68.2
Msa1309180 AT4G12020.10 70.000 40 12 0 135 174 622 661 8.45e-12 64.7
Msa1309180 AT4G12020.2 51.667 60 28 1 153 212 467 525 5.20e-13 68.2
Msa1309180 AT4G12020.2 70.000 40 12 0 135 174 622 661 8.62e-12 64.7
Msa1309180 AT4G12020.3 51.667 60 28 1 153 212 467 525 5.24e-13 68.2
Msa1309180 AT4G12020.3 70.000 40 12 0 135 174 622 661 8.30e-12 64.7
Msa1309180 AT4G12020.1 51.667 60 28 1 153 212 467 525 5.52e-13 68.2
Msa1309180 AT4G12020.1 70.000 40 12 0 135 174 622 661 8.91e-12 64.7
Msa1309180 AT4G12020.9 51.667 60 28 1 153 212 467 525 5.52e-13 68.2
Msa1309180 AT4G12020.9 70.000 40 12 0 135 174 622 661 8.91e-12 64.7
Msa1309180 AT4G12020.7 51.667 60 28 1 153 212 467 525 5.57e-13 68.2
Msa1309180 AT4G12020.7 70.000 40 12 0 135 174 622 661 9.25e-12 64.7
Msa1309180 AT4G12020.6 51.667 60 28 1 153 212 467 525 5.62e-13 68.2
Msa1309180 AT4G12020.6 70.000 40 12 0 135 174 622 661 8.73e-12 64.7
Msa1309180 AT4G12020.8 51.667 60 28 1 153 212 467 525 5.62e-13 68.2
Msa1309180 AT4G12020.8 70.000 40 12 0 135 174 622 661 8.73e-12 64.7
Msa1309180 AT4G12020.5 51.667 60 28 1 153 212 400 458 6.08e-13 68.2
Msa1309180 AT4G12020.5 70.000 40 12 0 135 174 555 594 9.44e-12 64.7
Msa1309180 AT4G12020.11 51.667 60 28 1 153 212 467 525 8.11e-13 67.8
Msa1309180 AT4G12020.11 70.000 40 12 0 135 174 622 661 1.03e-11 64.3
Msa1309180 AT1G30650.1 38.043 92 54 3 122 210 183 274 1.22e-12 66.6
Msa1309180 AT2G40740.1 51.724 58 25 1 154 208 173 230 2.04e-12 65.5
Msa1309180 AT3G56400.1 32.673 101 61 2 111 208 81 177 2.23e-12 65.5
Msa1309180 AT4G23550.1 45.902 61 32 1 151 210 137 197 2.68e-12 65.5
Msa1309180 AT2G40740.3 51.724 58 25 1 154 208 182 239 2.71e-12 65.1
Msa1309180 AT1G66600.1 49.153 59 27 1 153 208 102 160 3.08e-12 64.3
Msa1309180 AT1G66550.2 48.276 58 27 1 154 208 103 160 3.53e-12 64.3
Msa1309180 AT1G66560.1 48.276 58 27 1 154 208 103 160 3.98e-12 64.3
Msa1309180 AT1G66550.1 48.276 58 27 1 154 208 108 165 4.49e-12 64.3
Msa1309180 AT2G40750.1 37.895 95 49 3 124 208 115 209 7.38e-12 64.3
Msa1309180 AT3G58710.1 40.506 79 45 2 145 221 62 140 9.80e-12 63.5
Msa1309180 AT3G58710.2 40.506 79 45 2 145 221 61 139 1.03e-11 63.2
Msa1309180 AT5G52830.1 49.123 57 28 1 155 210 166 222 1.13e-11 63.5
Msa1309180 AT5G01900.1 39.535 86 41 3 148 222 104 189 2.27e-11 62.4
Msa1309180 AT5G22570.1 49.123 57 26 1 155 208 111 167 4.43e-11 61.6

Find 66 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAACTTGGAGATCATAAT+TGG 0.180861 8_4:-5655924 None:intergenic
TATGAAATAAAATCCTAATT+TGG 0.192989 8_4:-5655868 None:intergenic
TATTTATATACATACGTAAA+TGG 0.225849 8_4:-5661129 None:intergenic
ATAAAATCCTAATTTGGATT+TGG 0.248345 8_4:-5655862 None:intergenic
TAAAATCCTAATTTGGATTT+GGG 0.281426 8_4:-5655861 None:intergenic
ATTGAACAAAACCCATTTCA+TGG 0.296272 8_4:-5655970 None:intergenic
ATTTCATAAAAGAAGGGATA+TGG 0.300649 8_4:+5655883 Msa1309180:exon
TTCTCATCACTCACAGCTTT+GGG 0.313305 8_4:-5656635 None:intergenic
AGATATCCCAAATCCAAATT+AGG 0.315846 8_4:+5655855 Msa1309180:five_prime_UTR
CTCTCAAGCTATCCATGAAA+TGG 0.321044 8_4:+5655958 Msa1309180:CDS
ATTCTCATCACTCACAGCTT+TGG 0.324655 8_4:-5656636 None:intergenic
ATTGAGAAAGTTGAGAAGGT+TGG 0.338269 8_4:-5656039 None:intergenic
TTGAGAAAGTTGAGAAGGTT+GGG 0.349918 8_4:-5656038 None:intergenic
TTCAATCTTTGTTTCAAAGA+TGG 0.381500 8_4:+5661082 Msa1309180:three_prime_UTR
CTCTCCAATGGAATTCTAAA+GGG 0.385549 8_4:-5655705 None:intergenic
CATCTACATCACTTCTTGTC+TGG 0.400937 8_4:-5657030 None:intergenic
GGTTACAAATGGAGGAAGTA+TGG 0.401960 8_4:+5657064 Msa1309180:CDS
TAGTAGTGACAAGATCATTA+TGG 0.415610 8_4:-5656141 None:intergenic
CTTTCTCAATCTCTAAATTC+CGG 0.416525 8_4:+5656052 Msa1309180:CDS
TCTCTCCAATGGAATTCTAA+AGG 0.428741 8_4:-5655706 None:intergenic
CATTCCCTTTAGAATTCCAT+TGG 0.460035 8_4:+5655701 Msa1309180:five_prime_UTR
ATTATAATTACCTTGGATGA+AGG 0.467552 8_4:-5657108 None:intergenic
AACTCCTTGGAACAACGAAC+AGG 0.468098 8_4:+5656165 Msa1309180:CDS
ATTATGTCTGCCTTCATAAG+TGG 0.474936 8_4:-5660877 None:intergenic
TCTCAAGCTATCCATGAAAT+GGG 0.477777 8_4:+5655959 Msa1309180:CDS
AGAGATTGAGAAAGTTGAGA+AGG 0.481462 8_4:-5656043 None:intergenic
GGCGTTGGTGGTGCTACGGC+CGG 0.484990 8_4:-5656071 None:intergenic
TACAAATTTATGACATGTGA+GGG 0.489544 8_4:-5655764 None:intergenic
GAAACTTGGAGATCATAATT+GGG 0.491669 8_4:-5655923 None:intergenic
TGTGACGGCTGCACCGGTAG+TGG 0.499548 8_4:-5656092 None:intergenic
AAGATCATTATGGCTAAATC+CGG 0.500033 8_4:-5656131 None:intergenic
AGCACCACCAACGCCACTAC+CGG 0.520442 8_4:+5656079 Msa1309180:CDS
GCTGCACACATAACAATTGT+CGG 0.522647 8_4:+5660805 Msa1309180:CDS
CATTTCATGGATAGCTTGAG+AGG 0.523950 8_4:-5655957 None:intergenic
TGCTTGATGATGGTTACAAA+TGG 0.537448 8_4:+5657053 Msa1309180:CDS
AGGTATTTGTGAATGAAACT+TGG 0.539388 8_4:-5655937 None:intergenic
AGAAGAGCAAGGCGAAAGTG+AGG 0.541509 8_4:+5656978 Msa1309180:CDS
TAGTGGCGTTGGTGGTGCTA+CGG 0.543122 8_4:-5656075 None:intergenic
ACCACCTGTTCGTTGTTCCA+AGG 0.544699 8_4:-5656169 None:intergenic
CTGCACACATAACAATTGTC+GGG 0.546740 8_4:+5660806 Msa1309180:CDS
TGCACTGGAAATACTAGTGA+TGG 0.547346 8_4:+5656659 Msa1309180:CDS
ATATATAGGTGGAGGAGTGG+AGG 0.551301 8_4:+5656950 Msa1309180:intron
GGCTGCACCGGTAGTGGCGT+TGG 0.551478 8_4:-5656086 None:intergenic
ATGATATATAGGTGGAGGAG+TGG 0.558137 8_4:+5656947 Msa1309180:intron
TGCACCGGTAGTGGCGTTGG+TGG 0.563104 8_4:-5656083 None:intergenic
AGTAGTTGTGACGGCTGCAC+CGG 0.565028 8_4:-5656098 None:intergenic
ATGGTGATAACCACTTATGA+AGG 0.566894 8_4:+5660867 Msa1309180:CDS
GAAGGTTGGGATTGTGTAGA+GGG 0.569637 8_4:-5656025 None:intergenic
CTTGTCTGGAAACAAAACCT+TGG 0.574196 8_4:-5657016 None:intergenic
GATGTAGATGTGCTTGATGA+TGG 0.574505 8_4:+5657043 Msa1309180:CDS
GTGAGTGATGAGAATTGCAC+TGG 0.574611 8_4:+5656644 Msa1309180:CDS
AGAAGGTTGGGATTGTGTAG+AGG 0.578720 8_4:-5656026 None:intergenic
ACAACTACTACTGTGGCTGC+CGG 0.584827 8_4:+5656112 Msa1309180:CDS
TTGTCACTACTAGAACTCCT+TGG 0.585526 8_4:+5656152 Msa1309180:CDS
GGAGGAAACTTAGAGAGCCA+AGG 0.588730 8_4:+5656999 Msa1309180:CDS
TGGAGGAGCAGAGAAGAGCA+AGG 0.596711 8_4:+5656967 Msa1309180:CDS
CTAGTGATGGCAACAACACA+TGG 0.604178 8_4:+5656672 Msa1309180:CDS
CATAAAAGAAGGGATATGGA+AGG 0.606921 8_4:+5655887 Msa1309180:exon
TCAAGAATAGCCTTCATCCA+AGG 0.610641 8_4:+5657098 Msa1309180:CDS
AGCCACAGTAGTAGTTGTGA+CGG 0.615944 8_4:-5656107 None:intergenic
ATACAAATTTATGACATGTG+AGG 0.622055 8_4:-5655765 None:intergenic
AGAGCAAGGCGAAAGTGAGG+AGG 0.623548 8_4:+5656981 Msa1309180:CDS
ACTCTCAGAAGATTGTCGTA+TGG 0.646484 8_4:+5660848 Msa1309180:CDS
AGCCGTCACAACTACTACTG+TGG 0.649918 8_4:+5656105 Msa1309180:CDS
GAAGAATTAGAGTCGTCACA+AGG 0.658426 8_4:-5660906 None:intergenic
TTGATGATGGTTACAAATGG+AGG 0.665075 8_4:+5657056 Msa1309180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATCATAATACAATAA+CGG - chr8_4:5657173-5657192 None:intergenic 10.0%
!!! ACTTTAAAAAAATAACTATA+CGG - chr8_4:5658939-5658958 None:intergenic 10.0%
!!! TATTTATTTTTTAACAAGAA+AGG - chr8_4:5659188-5659207 None:intergenic 10.0%
!!! TTTTTTAAAAGATAAATACA+AGG - chr8_4:5660167-5660186 None:intergenic 10.0%
!!! AAACATTTTTATTTTATTAC+GGG + chr8_4:5660216-5660235 Msa1309180:intron 10.0%
!!! TTTTCTTTTTGTTTCTTATA+TGG - chr8_4:5655817-5655836 None:intergenic 15.0%
!! TATGAAATAAAATCCTAATT+TGG - chr8_4:5655871-5655890 None:intergenic 15.0%
!!! GATTTTATTTCATAAAAGAA+GGG + chr8_4:5655877-5655896 Msa1309180:five_prime_UTR 15.0%
!! AATTCAATTGATGTTAAATT+TGG - chr8_4:5656282-5656301 None:intergenic 15.0%
!! ACTAAATAATTATACATACA+GGG - chr8_4:5656373-5656392 None:intergenic 15.0%
!! AACTAAATAATTATACATAC+AGG - chr8_4:5656374-5656393 None:intergenic 15.0%
!! AATAAAAATGATCCAAAAAA+AGG - chr8_4:5656858-5656877 None:intergenic 15.0%
!! AAAAATGAAATATAGTAGAT+CGG + chr8_4:5657410-5657429 Msa1309180:intron 15.0%
!!! GTATTTTTTTGAGTAATATT+TGG + chr8_4:5657865-5657884 Msa1309180:intron 15.0%
!! GAAAAATAGAAAGATATTAT+TGG + chr8_4:5658236-5658255 Msa1309180:intron 15.0%
!!! TGTTATTTGAAATACTTATT+TGG + chr8_4:5658961-5658980 Msa1309180:intron 15.0%
!!! TTGAAATTTTTGTTCATTTA+AGG - chr8_4:5659069-5659088 None:intergenic 15.0%
!! TTAAATGAACAAAAATTTCA+AGG + chr8_4:5659068-5659087 Msa1309180:intron 15.0%
!!! AAGAAAACATTTTATCTTAA+AGG - chr8_4:5659220-5659239 None:intergenic 15.0%
!!! TTTTCTTTACAAATATTTTG+AGG + chr8_4:5659233-5659252 Msa1309180:intron 15.0%
!!! TATAGTATATACATTAGTTT+AGG + chr8_4:5659710-5659729 Msa1309180:intron 15.0%
!!! AGATTTTTTTTTTTTTTGGA+AGG + chr8_4:5659835-5659854 Msa1309180:intron 15.0%
!! AATAATCATTCACAAATTTA+AGG + chr8_4:5660301-5660320 Msa1309180:intron 15.0%
!!! TTTTTTTCATATAATACATG+AGG + chr8_4:5661014-5661033 Msa1309180:three_prime_UTR 15.0%
!! TAAAATCCTAATTTGGATTT+GGG - chr8_4:5655864-5655883 None:intergenic 20.0%
!! ATAAAATCCTAATTTGGATT+TGG - chr8_4:5655865-5655884 None:intergenic 20.0%
!!! GGATTTTATTTCATAAAAGA+AGG + chr8_4:5655876-5655895 Msa1309180:five_prime_UTR 20.0%
!! TGATTAATATACTAATGATG+TGG + chr8_4:5656554-5656573 Msa1309180:intron 20.0%
!!! TGAAATTGGCAATTATTTTT+TGG - chr8_4:5656703-5656722 None:intergenic 20.0%
!! GGAAAAAAAAACATTGAAAT+TGG - chr8_4:5656717-5656736 None:intergenic 20.0%
!!! TTTTATTTGAAGACTCATAT+AGG + chr8_4:5656884-5656903 Msa1309180:intron 20.0%
!! TTTATTTGAAGACTCATATA+GGG + chr8_4:5656885-5656904 Msa1309180:intron 20.0%
!!! TGATTTGTATGATGATATAT+AGG + chr8_4:5656936-5656955 Msa1309180:intron 20.0%
!! GATTATCACGTATAATATAT+AGG + chr8_4:5657215-5657234 Msa1309180:intron 20.0%
!!! TGGACTTTAAAATTATATCA+AGG + chr8_4:5657328-5657347 Msa1309180:intron 20.0%
!!! TCGTTTTTTATCAATAAACT+TGG - chr8_4:5657618-5657637 None:intergenic 20.0%
!!! TTTTGTTTTGTGATATTTGT+AGG - chr8_4:5657648-5657667 None:intergenic 20.0%
!!! TATAAATTCAAACACTGATT+TGG - chr8_4:5657714-5657733 None:intergenic 20.0%
!! ATCAGTGTTTGAATTTATAA+TGG + chr8_4:5657715-5657734 Msa1309180:intron 20.0%
!!! GTTGTTTTATTTTCTTTGTT+TGG - chr8_4:5657744-5657763 None:intergenic 20.0%
!! TGATTATTTCGTATAGTATA+AGG + chr8_4:5657839-5657858 Msa1309180:intron 20.0%
!! GATTATTTCGTATAGTATAA+GGG + chr8_4:5657840-5657859 Msa1309180:intron 20.0%
!! ATATTATATAATCGAGTACA+TGG + chr8_4:5657933-5657952 Msa1309180:intron 20.0%
!! ATATATATGTATATCTCTAG+TGG + chr8_4:5658264-5658283 Msa1309180:intron 20.0%
!! AATGAATGTAGGAAAATTAT+AGG + chr8_4:5658605-5658624 Msa1309180:intron 20.0%
!! AATATGACATGATAATAGTA+AGG + chr8_4:5658694-5658713 Msa1309180:intron 20.0%
!!! ACAATTTTGACATCAAATTT+TGG + chr8_4:5658988-5659007 Msa1309180:intron 20.0%
!! ATCTTACTATACTATACTAT+TGG - chr8_4:5659349-5659368 None:intergenic 20.0%
!! AATAGTATAGTATAGTAAGA+TGG + chr8_4:5659348-5659367 Msa1309180:intron 20.0%
!!! CTCTTTTATTTTTTCGTAAT+TGG - chr8_4:5659439-5659458 None:intergenic 20.0%
!!! GAAAGTTTAATAGTTTTACT+TGG + chr8_4:5659502-5659521 Msa1309180:intron 20.0%
!! TATTAAACCAAAGAAAATGT+TGG + chr8_4:5659577-5659596 Msa1309180:intron 20.0%
!!! AAATTTACCAACATTTTCTT+TGG - chr8_4:5659587-5659606 None:intergenic 20.0%
!! AATGTAAACAAATTGACTAT+TGG + chr8_4:5659762-5659781 Msa1309180:intron 20.0%
!!! GAGGAGATTTTTTTTTTTTT+TGG + chr8_4:5659831-5659850 Msa1309180:intron 20.0%
!! CTTATATATCTAGTGTATTA+AGG - chr8_4:5660535-5660554 None:intergenic 20.0%
!! TCCATTATTTACCTATTTAT+AGG + chr8_4:5660571-5660590 Msa1309180:intron 20.0%
! TACAAATTTATGACATGTGA+GGG - chr8_4:5655767-5655786 None:intergenic 25.0%
! ATACAAATTTATGACATGTG+AGG - chr8_4:5655768-5655787 None:intergenic 25.0%
! ATTTCATAAAAGAAGGGATA+TGG + chr8_4:5655883-5655902 Msa1309180:exon 25.0%
!!! ACTTTTGTGATTTTTTGATC+AGG + chr8_4:5656598-5656617 Msa1309180:intron 25.0%
!!! ACTAATTTGAAGCCTTTTTT+TGG + chr8_4:5656843-5656862 Msa1309180:intron 25.0%
! TTATTTGAAGACTCATATAG+GGG + chr8_4:5656886-5656905 Msa1309180:intron 25.0%
! TTTGTATGATGATATATAGG+TGG + chr8_4:5656939-5656958 Msa1309180:intron 25.0%
! ATTATAATTACCTTGGATGA+AGG - chr8_4:5657111-5657130 None:intergenic 25.0%
! TGAAGAGATTATAATTACCT+TGG - chr8_4:5657118-5657137 None:intergenic 25.0%
!!! TTTTTTCATAACTCTCCAAA+GGG - chr8_4:5657361-5657380 None:intergenic 25.0%
!!! ATTTTTTCATAACTCTCCAA+AGG - chr8_4:5657362-5657381 None:intergenic 25.0%
! AAAATGAAATCATTTCCCTT+TGG + chr8_4:5657377-5657396 Msa1309180:intron 25.0%
!!! TTTTTTCTTAACTCTCCAAA+GGG - chr8_4:5657395-5657414 None:intergenic 25.0%
!!! ATTTTTTCTTAACTCTCCAA+AGG - chr8_4:5657396-5657415 None:intergenic 25.0%
!!! AACATTGATTTGTTCAAAGT+TGG + chr8_4:5657509-5657528 Msa1309180:intron 25.0%
!! TATTGTTTTCGATCTATATG+AGG - chr8_4:5657539-5657558 None:intergenic 25.0%
! TTCAAAGTCGCTAAAATAAA+AGG + chr8_4:5657564-5657583 Msa1309180:intron 25.0%
! TCAAAGTCGCTAAAATAAAA+GGG + chr8_4:5657565-5657584 Msa1309180:intron 25.0%
! AAATAAAAGGGATAAACATG+TGG + chr8_4:5657577-5657596 Msa1309180:intron 25.0%
! TATTTGAAAACCTAAGTTTC+AGG + chr8_4:5657893-5657912 Msa1309180:intron 25.0%
!!! TGTCTTTTTTGGGAAAAATA+AGG + chr8_4:5657996-5658015 Msa1309180:intron 25.0%
!!! GTCTTTTTTGGGAAAAATAA+GGG + chr8_4:5657997-5658016 Msa1309180:intron 25.0%
! AATTTCATTAGTTAAACGCT+AGG - chr8_4:5658399-5658418 None:intergenic 25.0%
!! ATGTATGTTCATTAGTGTTT+TGG + chr8_4:5658510-5658529 Msa1309180:intron 25.0%
!! TGTATGTTCATTAGTGTTTT+GGG + chr8_4:5658511-5658530 Msa1309180:intron 25.0%
! AGAGAGATAAAAAGAAAATG+AGG + chr8_4:5658577-5658596 Msa1309180:intron 25.0%
! TGATAATTTAAGAATCCATG+AGG - chr8_4:5658642-5658661 None:intergenic 25.0%
! AAGATATATATTGTCATCGA+TGG - chr8_4:5658752-5658771 None:intergenic 25.0%
! AAACAATGCCTATATTTCTT+AGG + chr8_4:5658830-5658849 Msa1309180:intron 25.0%
!! AAATGATGTTTTATCAAGCT+TGG - chr8_4:5659290-5659309 None:intergenic 25.0%
! TGATAAAACATCATTTAGTG+AGG + chr8_4:5659294-5659313 Msa1309180:intron 25.0%
! GGAATGGAACTAATAATTAA+GGG + chr8_4:5659395-5659414 Msa1309180:intron 25.0%
! ATTAAGGGAAAGAAAAACAT+TGG + chr8_4:5659410-5659429 Msa1309180:intron 25.0%
! TATTAAACTTTCTTCCATGA+AGG - chr8_4:5659494-5659513 None:intergenic 25.0%
! CATGTGAATGAGTAAAATAT+TGG - chr8_4:5659945-5659964 None:intergenic 25.0%
!!! TGGGCTATAATTTTTTTTTG+AGG - chr8_4:5660038-5660057 None:intergenic 25.0%
! GCCTATAAATAGGTAAATAA+TGG - chr8_4:5660575-5660594 None:intergenic 25.0%
!! TTCAATCTTTGTTTCAAAGA+TGG + chr8_4:5661082-5661101 Msa1309180:three_prime_UTR 25.0%
!!! AAGAGTTTTATTCTCTCCAA+TGG - chr8_4:5655720-5655739 None:intergenic 30.0%
AGATATCCCAAATCCAAATT+AGG + chr8_4:5655855-5655874 Msa1309180:five_prime_UTR 30.0%
GAAACTTGGAGATCATAATT+GGG - chr8_4:5655926-5655945 None:intergenic 30.0%
TGAAACTTGGAGATCATAAT+TGG - chr8_4:5655927-5655946 None:intergenic 30.0%
AGGTATTTGTGAATGAAACT+TGG - chr8_4:5655940-5655959 None:intergenic 30.0%
ATTGAACAAAACCCATTTCA+TGG - chr8_4:5655973-5655992 None:intergenic 30.0%
CTTTCTCAATCTCTAAATTC+CGG + chr8_4:5656052-5656071 Msa1309180:CDS 30.0%
AAGATCATTATGGCTAAATC+CGG - chr8_4:5656134-5656153 None:intergenic 30.0%
TAGTAGTGACAAGATCATTA+TGG - chr8_4:5656144-5656163 None:intergenic 30.0%
! TTCTGTCCTTTTCAATGTTA+GGG + chr8_4:5656495-5656514 Msa1309180:intron 30.0%
ACAATACCCTAACATTGAAA+AGG - chr8_4:5656504-5656523 None:intergenic 30.0%
AGGAGTAAAATTCTCACTTA+TGG - chr8_4:5657461-5657480 None:intergenic 30.0%
! GAGAATTTTACTCCTATCTT+TGG + chr8_4:5657466-5657485 Msa1309180:intron 30.0%
AAGAGAAAAATGCCAAAGAT+AGG - chr8_4:5657481-5657500 None:intergenic 30.0%
TTGTTCACCATATATTGATG+CGG - chr8_4:5657768-5657787 None:intergenic 30.0%
! AACATTTTCACCTGAAACTT+AGG - chr8_4:5657906-5657925 None:intergenic 30.0%
!!! TGAAGGTAGAATGTCTTTTT+TGG + chr8_4:5657985-5658004 Msa1309180:intron 30.0%
!!! GAAGGTAGAATGTCTTTTTT+GGG + chr8_4:5657986-5658005 Msa1309180:intron 30.0%
! GTTTGGTTTCAAAATGTTTG+AGG - chr8_4:5658054-5658073 None:intergenic 30.0%
TTGACTATAGTGAAGATTGA+TGG + chr8_4:5658167-5658186 Msa1309180:intron 30.0%
ACATTATGTACATAGGACAA+AGG - chr8_4:5658346-5658365 None:intergenic 30.0%
TTTGGGAACATTATGTACAT+AGG - chr8_4:5658353-5658372 None:intergenic 30.0%
AGGATTAAGTGAAAGAAGTT+GGG - chr8_4:5658379-5658398 None:intergenic 30.0%
TAGGATTAAGTGAAAGAAGT+TGG - chr8_4:5658380-5658399 None:intergenic 30.0%
AAGGTGCATGTATATATTTG+GGG - chr8_4:5658554-5658573 None:intergenic 30.0%
CAAGGTGCATGTATATATTT+GGG - chr8_4:5658555-5658574 None:intergenic 30.0%
TCAAGGTGCATGTATATATT+TGG - chr8_4:5658556-5658575 None:intergenic 30.0%
! TTCTTTTTATCTCTCTCTCA+AGG - chr8_4:5658573-5658592 None:intergenic 30.0%
!!! ATGAGGTTTTGAATGAATGT+AGG + chr8_4:5658594-5658613 Msa1309180:intron 30.0%
TAAGAATCCATGAGGATATT+TGG - chr8_4:5658634-5658653 None:intergenic 30.0%
TGATAATAGTAAGGTGTGAT+AGG + chr8_4:5658703-5658722 Msa1309180:intron 30.0%
GTGATACTCCTAAGAAATAT+AGG - chr8_4:5658841-5658860 None:intergenic 30.0%
CCTTGACAACATATTTGAAT+TGG - chr8_4:5659022-5659041 None:intergenic 30.0%
CCAATTCAAATATGTTGTCA+AGG + chr8_4:5659019-5659038 Msa1309180:intron 30.0%
!!! TAAGTCGGGTTTTAAAACTA+TGG + chr8_4:5659115-5659134 Msa1309180:intron 30.0%
ACATCATTTAGTGAGGATTT+CGG + chr8_4:5659301-5659320 Msa1309180:intron 30.0%
AACCAAAGTTACTTAGACTA+AGG + chr8_4:5659372-5659391 Msa1309180:intron 30.0%
ACCAAAGTTACTTAGACTAA+GGG + chr8_4:5659373-5659392 Msa1309180:intron 30.0%
GGGAATGGAACTAATAATTA+AGG + chr8_4:5659394-5659413 Msa1309180:intron 30.0%
CTTAATGAACCAATACAAAG+TGG + chr8_4:5659530-5659549 Msa1309180:intron 30.0%
CTTTAACCACAATCTTGTAA+TGG - chr8_4:5659627-5659646 None:intergenic 30.0%
TGTGGTTAAAGATATGTACT+TGG + chr8_4:5659636-5659655 Msa1309180:intron 30.0%
TAAAGATATGTACTTGGAAG+TGG + chr8_4:5659642-5659661 Msa1309180:intron 30.0%
TAACACTTAGCAGTACTATT+GGG - chr8_4:5660057-5660076 None:intergenic 30.0%
AAAATACTACCATATACCCA+AGG - chr8_4:5660114-5660133 None:intergenic 30.0%
! TATGGTAGTATTTTCACCTT+TGG + chr8_4:5660120-5660139 Msa1309180:intron 30.0%
! ATGGTAGTATTTTCACCTTT+GGG + chr8_4:5660121-5660140 Msa1309180:intron 30.0%
ATTATTAAGTCCTACATCCA+GGG - chr8_4:5660287-5660306 None:intergenic 30.0%
!!! TTTGTTTTGGGTCATGTTAT+AGG - chr8_4:5660377-5660396 None:intergenic 30.0%
AAATGTTCAATGACCAAAAG+AGG + chr8_4:5660484-5660503 Msa1309180:intron 30.0%
!!! TAAGGTTTTGAATCGAGATA+TGG - chr8_4:5660517-5660536 None:intergenic 30.0%
TGAGTGATTAAATATGTGAG+TGG - chr8_4:5660612-5660631 None:intergenic 30.0%
AAAATCTTACCGCACATATT+GGG - chr8_4:5660644-5660663 None:intergenic 30.0%
TAAAATCTTACCGCACATAT+TGG - chr8_4:5660645-5660664 None:intergenic 30.0%
! TTTTACTGAAACGACATTGT+TGG - chr8_4:5660961-5660980 None:intergenic 30.0%
!! CATTCCCTTTAGAATTCCAT+TGG + chr8_4:5655701-5655720 Msa1309180:five_prime_UTR 35.0%
CTCTCCAATGGAATTCTAAA+GGG - chr8_4:5655708-5655727 None:intergenic 35.0%
TCTCTCCAATGGAATTCTAA+AGG - chr8_4:5655709-5655728 None:intergenic 35.0%
! GAGGGTTTTTGTGTATAGTT+TGG - chr8_4:5655749-5655768 None:intergenic 35.0%
CATAAAAGAAGGGATATGGA+AGG + chr8_4:5655887-5655906 Msa1309180:exon 35.0%
TCTCAAGCTATCCATGAAAT+GGG + chr8_4:5655959-5655978 Msa1309180:CDS 35.0%
TTGAGAAAGTTGAGAAGGTT+GGG - chr8_4:5656041-5656060 None:intergenic 35.0%
ATTGAGAAAGTTGAGAAGGT+TGG - chr8_4:5656042-5656061 None:intergenic 35.0%
AGAGATTGAGAAAGTTGAGA+AGG - chr8_4:5656046-5656065 None:intergenic 35.0%
! GTTCTGTCCTTTTCAATGTT+AGG + chr8_4:5656494-5656513 Msa1309180:intron 35.0%
TAGAGAGAGAGAAAAGAAGA+AGG - chr8_4:5656738-5656757 None:intergenic 35.0%
GTATGATGATATATAGGTGG+AGG + chr8_4:5656942-5656961 Msa1309180:intron 35.0%
!! TGCTTGATGATGGTTACAAA+TGG + chr8_4:5657053-5657072 Msa1309180:CDS 35.0%
!! TTGATGATGGTTACAAATGG+AGG + chr8_4:5657056-5657075 Msa1309180:CDS 35.0%
! ACTTAACTTTTGTTCAACCG+CGG - chr8_4:5657251-5657270 None:intergenic 35.0%
TATCAAGGTTCATTTCCCTT+TGG + chr8_4:5657343-5657362 Msa1309180:intron 35.0%
AACAACACCTATCTCTTTGA+AGG + chr8_4:5657788-5657807 Msa1309180:intron 35.0%
!! TACATCAAAGGCATTATACC+CGG + chr8_4:5657957-5657976 Msa1309180:intron 35.0%
! TTTGGGAAAAATAAGGGTGT+CGG + chr8_4:5658003-5658022 Msa1309180:intron 35.0%
GTGCTCTATAGTCAAAACTA+TGG - chr8_4:5658299-5658318 None:intergenic 35.0%
TTGACTATAGAGCACACTAT+AGG + chr8_4:5658304-5658323 Msa1309180:intron 35.0%
TGACTATAGAGCACACTATA+GGG + chr8_4:5658305-5658324 Msa1309180:intron 35.0%
! TGAAAGAAGTTGGGTGTTTT+GGG - chr8_4:5658370-5658389 None:intergenic 35.0%
ATAATTTCGACTAGGCTCAA+TGG - chr8_4:5658911-5658930 None:intergenic 35.0%
TGAGCCTAGTCGAAATTATA+TGG + chr8_4:5658912-5658931 Msa1309180:intron 35.0%
AATTTCAAGGTCCATGTGAT+TGG + chr8_4:5659081-5659100 Msa1309180:intron 35.0%
!! GGCTTTGAAGCAAATGTATT+AGG + chr8_4:5659254-5659273 Msa1309180:intron 35.0%
ATTTAGTGAGGATTTCGGAT+AGG + chr8_4:5659306-5659325 Msa1309180:intron 35.0%
CCAAAGTTACTTAGACTAAG+GGG + chr8_4:5659374-5659393 Msa1309180:intron 35.0%
TGTTGATATTGTTGCCTTCA+TGG + chr8_4:5659477-5659496 Msa1309180:intron 35.0%
TAACCACAATCTTGTAATGG+TGG - chr8_4:5659624-5659643 None:intergenic 35.0%
ATGTACTTGGAAGTGGAATT+AGG + chr8_4:5659649-5659668 Msa1309180:intron 35.0%
! TACATTTTCAAACACCTCAC+CGG - chr8_4:5659748-5659767 None:intergenic 35.0%
! CGAGAGAACTTTTTATGAAG+AGG + chr8_4:5659812-5659831 Msa1309180:intron 35.0%
TACTCATTCACATGTGATGT+AGG + chr8_4:5659951-5659970 Msa1309180:intron 35.0%
ATTCACATGTGATGTAGGTA+GGG + chr8_4:5659956-5659975 Msa1309180:intron 35.0%
!!! TTTTTTGAGGTTCATGCCTT+GGG - chr8_4:5660025-5660044 None:intergenic 35.0%
!!! TTTTTTTGAGGTTCATGCCT+TGG - chr8_4:5660026-5660045 None:intergenic 35.0%
CTAACACTTAGCAGTACTAT+TGG - chr8_4:5660058-5660077 None:intergenic 35.0%
CAATAGTACTGCTAAGTGTT+AGG + chr8_4:5660056-5660075 Msa1309180:intron 35.0%
! TGTTAGGTGAGTGTGTTTTT+GGG + chr8_4:5660072-5660091 Msa1309180:intron 35.0%
TATATAAGTGGTACACCCAA+AGG - chr8_4:5660139-5660158 None:intergenic 35.0%
!! TACAAGGTGTCGTATATAAG+TGG - chr8_4:5660151-5660170 None:intergenic 35.0%
GATTATTAAGTCCTACATCC+AGG - chr8_4:5660288-5660307 None:intergenic 35.0%
TTGTGTTTGATGTTTCTCTC+AGG - chr8_4:5660466-5660485 None:intergenic 35.0%
! CATTTGAAACCCAATATGTG+CGG + chr8_4:5660632-5660651 Msa1309180:intron 35.0%
ATGGTGATAACCACTTATGA+AGG + chr8_4:5660867-5660886 Msa1309180:CDS 35.0%
ATTATGTCTGCCTTCATAAG+TGG - chr8_4:5660880-5660899 None:intergenic 35.0%
GACATTGTTGGATCAAAAAG+AGG - chr8_4:5660949-5660968 None:intergenic 35.0%
CATTTCATGGATAGCTTGAG+AGG - chr8_4:5655960-5655979 None:intergenic 40.0%
CTCTCAAGCTATCCATGAAA+TGG + chr8_4:5655958-5655977 Msa1309180:CDS 40.0%
TTGTCACTACTAGAACTCCT+TGG + chr8_4:5656152-5656171 Msa1309180:CDS 40.0%
TTCTCATCACTCACAGCTTT+GGG - chr8_4:5656638-5656657 None:intergenic 40.0%
ATTCTCATCACTCACAGCTT+TGG - chr8_4:5656639-5656658 None:intergenic 40.0%
TGCACTGGAAATACTAGTGA+TGG + chr8_4:5656659-5656678 Msa1309180:CDS 40.0%
ATGATATATAGGTGGAGGAG+TGG + chr8_4:5656947-5656966 Msa1309180:intron 40.0%
CTTGTCTGGAAACAAAACCT+TGG - chr8_4:5657019-5657038 None:intergenic 40.0%
CATCTACATCACTTCTTGTC+TGG - chr8_4:5657033-5657052 None:intergenic 40.0%
GATGTAGATGTGCTTGATGA+TGG + chr8_4:5657043-5657062 Msa1309180:CDS 40.0%
GGTTACAAATGGAGGAAGTA+TGG + chr8_4:5657064-5657083 Msa1309180:CDS 40.0%
TCAAGAATAGCCTTCATCCA+AGG + chr8_4:5657098-5657117 Msa1309180:CDS 40.0%
ATATAGGTTAGTACTAGCCG+CGG + chr8_4:5657231-5657250 Msa1309180:intron 40.0%
CGTTTCAACGAGGTTCAATT+CGG - chr8_4:5657299-5657318 None:intergenic 40.0%
AACTAACGATCGTTTCAACG+AGG - chr8_4:5657309-5657328 None:intergenic 40.0%
TCGTTGAAACGATCGTTAGT+TGG + chr8_4:5657308-5657327 Msa1309180:intron 40.0%
! GTTTAGAATTCAGACGTCTC+TGG + chr8_4:5657671-5657690 Msa1309180:intron 40.0%
AACAACGCCGCATCAATATA+TGG + chr8_4:5657758-5657777 Msa1309180:intron 40.0%
CCTTCATCCTTCAAAGAGAT+AGG - chr8_4:5657798-5657817 None:intergenic 40.0%
! CCTATCTCTTTGAAGGATGA+AGG + chr8_4:5657795-5657814 Msa1309180:intron 40.0%
ACATTCTACCTTCATTCCTC+CGG - chr8_4:5657979-5657998 None:intergenic 40.0%
TCTCTCTAGTTGTGAGTGTT+TGG - chr8_4:5658071-5658090 None:intergenic 40.0%
TCTCTCCAGCTAAAACTGAA+AGG + chr8_4:5658106-5658125 Msa1309180:intron 40.0%
TCCAGCTAAAACTGAAAGGA+AGG + chr8_4:5658110-5658129 Msa1309180:intron 40.0%
!! TCCTTCCTTTCAGTTTTAGC+TGG - chr8_4:5658114-5658133 None:intergenic 40.0%
TGATGGTACAGACTGAACAT+AGG + chr8_4:5658184-5658203 Msa1309180:intron 40.0%
GATGGTACAGACTGAACATA+GGG + chr8_4:5658185-5658204 Msa1309180:intron 40.0%
ATGTACATAGGACAAAGGAG+TGG - chr8_4:5658341-5658360 None:intergenic 40.0%
! GTGAAAGAAGTTGGGTGTTT+TGG - chr8_4:5658371-5658390 None:intergenic 40.0%
ATTAGTGCACATCATGCACA+CGG - chr8_4:5658444-5658463 None:intergenic 40.0%
GTGCATGTATATATTTGGGG+TGG - chr8_4:5658551-5658570 None:intergenic 40.0%
TAGGTGTCCAAATATCCTCA+TGG + chr8_4:5658624-5658643 Msa1309180:intron 40.0%
CGGACCATATAATTTCGACT+AGG - chr8_4:5658919-5658938 None:intergenic 40.0%
TTGGTCAGATCAGTCTAAGT+CGG + chr8_4:5659100-5659119 Msa1309180:intron 40.0%
CAAATGTATTAGGCTAGACG+TGG + chr8_4:5659264-5659283 Msa1309180:intron 40.0%
CCCCTTAGTCTAAGTAACTT+TGG - chr8_4:5659377-5659396 None:intergenic 40.0%
GTTACTTAGACTAAGGGGAA+TGG + chr8_4:5659379-5659398 Msa1309180:intron 40.0%
GCACTTCAACCACTTTGTAT+TGG - chr8_4:5659542-5659561 None:intergenic 40.0%
AGACCACCATTACAAGATTG+TGG + chr8_4:5659618-5659637 Msa1309180:intron 40.0%
GTTTAGGAACATTAACGTGC+CGG + chr8_4:5659726-5659745 Msa1309180:intron 40.0%
! TTCTCTCGATTGTTACTTGC+TGG - chr8_4:5659800-5659819 None:intergenic 40.0%
CATTCACATGTGATGTAGGT+AGG + chr8_4:5659955-5659974 Msa1309180:intron 40.0%
TGCAAACCACTAAATGGAAC+TGG + chr8_4:5659994-5660013 Msa1309180:intron 40.0%
GCAAACCACTAAATGGAACT+GGG + chr8_4:5659995-5660014 Msa1309180:intron 40.0%
!!! TTTTTGAGGTTCATGCCTTG+GGG - chr8_4:5660024-5660043 None:intergenic 40.0%
! GTGTTAGGTGAGTGTGTTTT+TGG + chr8_4:5660071-5660090 Msa1309180:intron 40.0%
! TTTGAGGTTCCTTGGGTATA+TGG + chr8_4:5660102-5660121 Msa1309180:intron 40.0%
!!! GTGGGAGTGGATTTTGTTTT+GGG - chr8_4:5660389-5660408 None:intergenic 40.0%
!! AGTGGGAGTGGATTTTGTTT+TGG - chr8_4:5660390-5660409 None:intergenic 40.0%
AACAAGTGATATCAAAGCCC+TGG - chr8_4:5660429-5660448 None:intergenic 40.0%
! AGGGCTTTGATATCACTTGT+TGG + chr8_4:5660428-5660447 Msa1309180:intron 40.0%
! GGGCTTTGATATCACTTGTT+GGG + chr8_4:5660429-5660448 Msa1309180:intron 40.0%
! GGCTTTGATATCACTTGTTG+GGG + chr8_4:5660430-5660449 Msa1309180:intron 40.0%
GCTGCACACATAACAATTGT+CGG + chr8_4:5660805-5660824 Msa1309180:CDS 40.0%
CTGCACACATAACAATTGTC+GGG + chr8_4:5660806-5660825 Msa1309180:CDS 40.0%
ACTCTCAGAAGATTGTCGTA+TGG + chr8_4:5660848-5660867 Msa1309180:CDS 40.0%
GAAGAATTAGAGTCGTCACA+AGG - chr8_4:5660909-5660928 None:intergenic 40.0%
GAAGGTTGGGATTGTGTAGA+GGG - chr8_4:5656028-5656047 None:intergenic 45.0%
AGAAGGTTGGGATTGTGTAG+AGG - chr8_4:5656029-5656048 None:intergenic 45.0%
AGCCACAGTAGTAGTTGTGA+CGG - chr8_4:5656110-5656129 None:intergenic 45.0%
AACTCCTTGGAACAACGAAC+AGG + chr8_4:5656165-5656184 Msa1309180:CDS 45.0%
GTGAGTGATGAGAATTGCAC+TGG + chr8_4:5656644-5656663 Msa1309180:CDS 45.0%
CTAGTGATGGCAACAACACA+TGG + chr8_4:5656672-5656691 Msa1309180:CDS 45.0%
ATATATAGGTGGAGGAGTGG+AGG + chr8_4:5656950-5656969 Msa1309180:intron 45.0%
CGAGTACATGGCTACATCAA+AGG + chr8_4:5657945-5657964 Msa1309180:intron 45.0%
!! ATCAAAGGCATTATACCCGG+AGG + chr8_4:5657960-5657979 Msa1309180:intron 45.0%
CATTATACCCGGAGGAATGA+AGG + chr8_4:5657968-5657987 Msa1309180:intron 45.0%
CATTCTACCTTCATTCCTCC+GGG - chr8_4:5657978-5657997 None:intergenic 45.0%
AGGACAAAGGAGTGGAAAGA+GGG - chr8_4:5658333-5658352 None:intergenic 45.0%
TAGGACAAAGGAGTGGAAAG+AGG - chr8_4:5658334-5658353 None:intergenic 45.0%
TGTCATCGATGGTAGTTACG+CGG - chr8_4:5658741-5658760 None:intergenic 45.0%
!! TAGGAGTATCACCAGACACA+TGG + chr8_4:5658849-5658868 Msa1309180:intron 45.0%
!! AGGAGTATCACCAGACACAT+GGG + chr8_4:5658850-5658869 Msa1309180:intron 45.0%
TTCTTGATGTCCCATGTGTC+TGG - chr8_4:5658863-5658882 None:intergenic 45.0%
GACTGATCTGACCAATCACA+TGG - chr8_4:5659095-5659114 None:intergenic 45.0%
TGGTCAGATCAGTCTAAGTC+GGG + chr8_4:5659101-5659120 Msa1309180:intron 45.0%
!!! TAGGTGAGTGTGTTTTTGGG+AGG + chr8_4:5660075-5660094 Msa1309180:intron 45.0%
!!! TGAGTGTGTTTTTGGGAGGA+TGG + chr8_4:5660079-5660098 Msa1309180:intron 45.0%
!! GTTTTTGGGAGGATGGTTTG+AGG + chr8_4:5660086-5660105 Msa1309180:intron 45.0%
! AGGATGGTTTGAGGTTCCTT+GGG + chr8_4:5660095-5660114 Msa1309180:intron 45.0%
! ATATGGCGTGTCACCTCTTT+TGG - chr8_4:5660500-5660519 None:intergenic 45.0%
GTGTCGCATCGCCTATAAAT+AGG - chr8_4:5660585-5660604 None:intergenic 45.0%
!!! AAAACATTTTTATTTTATTA+CGG + chr8_4:5660215-5660234 Msa1309180:intron 5.0%
AGCCGTCACAACTACTACTG+TGG + chr8_4:5656105-5656124 Msa1309180:CDS 50.0%
ACAACTACTACTGTGGCTGC+CGG + chr8_4:5656112-5656131 Msa1309180:CDS 50.0%
TCCTTGGAACAACGAACAGG+TGG + chr8_4:5656168-5656187 Msa1309180:intron 50.0%
ACCACCTGTTCGTTGTTCCA+AGG - chr8_4:5656172-5656191 None:intergenic 50.0%
AGAAGAGCAAGGCGAAAGTG+AGG + chr8_4:5656978-5656997 Msa1309180:CDS 50.0%
GGAGGAAACTTAGAGAGCCA+AGG + chr8_4:5656999-5657018 Msa1309180:CDS 50.0%
GGACAAAGGAGTGGAAAGAG+GGG - chr8_4:5658332-5658351 None:intergenic 50.0%
ACATGTGATGTAGGTAGGGC+CGG + chr8_4:5659960-5659979 Msa1309180:intron 50.0%
! TTAGTGGTTTGCACACCCCA+AGG - chr8_4:5659987-5660006 None:intergenic 50.0%
GGGGTGTGCAAACCACTAAA+TGG + chr8_4:5659988-5660007 Msa1309180:intron 50.0%
! GAGGATGGTTTGAGGTTCCT+TGG + chr8_4:5660094-5660113 Msa1309180:intron 50.0%
GTTCAGCTTAGTGGAGGAGT+GGG - chr8_4:5660407-5660426 None:intergenic 50.0%
TCCTCCACTAAGCTGAACCA+GGG + chr8_4:5660409-5660428 Msa1309180:intron 50.0%
AAAGCCCTGGTTCAGCTTAG+TGG - chr8_4:5660416-5660435 None:intergenic 50.0%
TGATGTTTCTCTCAGGCCCT+CGG - chr8_4:5660459-5660478 None:intergenic 50.0%
!! TAGTGGCGTTGGTGGTGCTA+CGG - chr8_4:5656078-5656097 None:intergenic 55.0%
AGTAGTTGTGACGGCTGCAC+CGG - chr8_4:5656101-5656120 None:intergenic 55.0%
TGGAGGAGCAGAGAAGAGCA+AGG + chr8_4:5656967-5656986 Msa1309180:CDS 55.0%
AGAGCAAGGCGAAAGTGAGG+AGG + chr8_4:5656981-5657000 Msa1309180:CDS 55.0%
! GGAACATTAACGTGCCGGTG+AGG + chr8_4:5659731-5659750 Msa1309180:intron 55.0%
GGAGGCCCAGTTCCATTTAG+TGG - chr8_4:5660003-5660022 None:intergenic 55.0%
TTGAGGTTCATGCCTTGGGG+AGG - chr8_4:5660021-5660040 None:intergenic 55.0%
TCCTACGAATCCGGAGGCTT+GGG - chr8_4:5660260-5660279 None:intergenic 55.0%
TTCCTACGAATCCGGAGGCT+TGG - chr8_4:5660261-5660280 None:intergenic 55.0%
AGCCTCCGGATTCGTAGGAA+CGG + chr8_4:5660261-5660280 Msa1309180:intron 55.0%
GGTTCAGCTTAGTGGAGGAG+TGG - chr8_4:5660408-5660427 None:intergenic 55.0%
CTCCTCCACTAAGCTGAACC+AGG + chr8_4:5660408-5660427 Msa1309180:intron 55.0%
! ATCACTTGTTGGGGAGTCCG+AGG + chr8_4:5660439-5660458 Msa1309180:intron 55.0%
! TCACTTGTTGGGGAGTCCGA+GGG + chr8_4:5660440-5660459 Msa1309180:intron 55.0%
AGCACCACCAACGCCACTAC+CGG + chr8_4:5656079-5656098 Msa1309180:CDS 60.0%
ATGTAGGTAGGGCCGGACCT+TGG + chr8_4:5659967-5659986 Msa1309180:intron 60.0%
TGTAGGTAGGGCCGGACCTT+GGG + chr8_4:5659968-5659987 Msa1309180:intron 60.0%
GGTTTGCACACCCCAAGGTC+CGG - chr8_4:5659982-5660001 None:intergenic 60.0%
AATGGAACTGGGCCTCCCCA+AGG + chr8_4:5660006-5660025 Msa1309180:intron 60.0%
CACCTACAGACCCAAGCCTC+CGG + chr8_4:5660247-5660266 Msa1309180:intron 60.0%
ATCCGGAGGCTTGGGTCTGT+AGG - chr8_4:5660252-5660271 None:intergenic 60.0%
ACCCAAGCCTCCGGATTCGT+AGG + chr8_4:5660256-5660275 Msa1309180:intron 60.0%
CAGGGCCGTTCCTACGAATC+CGG - chr8_4:5660269-5660288 None:intergenic 60.0%
GTAGGAACGGCCCTGGATGT+AGG + chr8_4:5660274-5660293 Msa1309180:intron 60.0%
GCTTAGTGGAGGAGTGGGAG+TGG - chr8_4:5660402-5660421 None:intergenic 60.0%
GCCCTGGTTCAGCTTAGTGG+AGG - chr8_4:5660413-5660432 None:intergenic 60.0%
! TGCACCGGTAGTGGCGTTGG+TGG - chr8_4:5656086-5656105 None:intergenic 65.0%
! TGTGACGGCTGCACCGGTAG+TGG - chr8_4:5656095-5656114 None:intergenic 65.0%
GTAGGTAGGGCCGGACCTTG+GGG + chr8_4:5659969-5659988 Msa1309180:intron 65.0%
GGCCGTTCCTACGAATCCGG+AGG - chr8_4:5660266-5660285 None:intergenic 65.0%
CGGATTCGTAGGAACGGCCC+TGG + chr8_4:5660267-5660286 Msa1309180:intron 65.0%
!! GGCGTTGGTGGTGCTACGGC+CGG - chr8_4:5656074-5656093 None:intergenic 70.0%
! GGCTGCACCGGTAGTGGCGT+TGG - chr8_4:5656089-5656108 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 5655670 5661139 5655670 ID=Msa1309180;Name=Msa1309180
chr8_4 mRNA 5655670 5661139 5655670 ID=Msa1309180-mRNA-1;Parent=Msa1309180;Name=Msa1309180-mRNA-1;_AED=0.01;_eAED=0.01;_QI=232|1|1|1|0.66|0.5|4|183|227
chr8_4 exon 5655670 5656186 5655670 ID=Msa1309180-mRNA-1:exon:1817;Parent=Msa1309180-mRNA-1
chr8_4 exon 5656620 5656693 5656620 ID=Msa1309180-mRNA-1:exon:1818;Parent=Msa1309180-mRNA-1
chr8_4 exon 5656958 5657119 5656958 ID=Msa1309180-mRNA-1:exon:1819;Parent=Msa1309180-mRNA-1
chr8_4 exon 5660794 5661139 5660794 ID=Msa1309180-mRNA-1:exon:1820;Parent=Msa1309180-mRNA-1
chr8_4 five_prime_UTR 5655670 5655901 5655670 ID=Msa1309180-mRNA-1:five_prime_utr;Parent=Msa1309180-mRNA-1
chr8_4 CDS 5655902 5656186 5655902 ID=Msa1309180-mRNA-1:cds;Parent=Msa1309180-mRNA-1
chr8_4 CDS 5656620 5656693 5656620 ID=Msa1309180-mRNA-1:cds;Parent=Msa1309180-mRNA-1
chr8_4 CDS 5656958 5657119 5656958 ID=Msa1309180-mRNA-1:cds;Parent=Msa1309180-mRNA-1
chr8_4 CDS 5660794 5660956 5660794 ID=Msa1309180-mRNA-1:cds;Parent=Msa1309180-mRNA-1
chr8_4 three_prime_UTR 5660957 5661139 5660957 ID=Msa1309180-mRNA-1:three_prime_utr;Parent=Msa1309180-mRNA-1
Gene Sequence

>Msa1309180

ATGGAAGGAGAAAGAGATGTTCCCAATTATGATCTCCAAGTTTCATTCACAAATACCTCTCAAGCTATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCTTGTCACCCTCTACACAATCCCAACCTTCTCAACTTTCTCAATCTCTAAATTCCGGCCGTAGCACCACCAACGCCACTACCGGTGCAGCCGTCACAACTACTACTGTGGCTGCCGGATTTAGCCATAATGATCTTGTCACTACTAGAACTCCTTGGAACAACGAACAGGTGAGAACTCTAGATCCCAAAGCTGTGAGTGATGAGAATTGCACTGGAAATACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGAGCAGAGAAGAGCAAGGCGAAAGTGAGGAGGAAACTTAGAGAGCCAAGGTTTTGTTTCCAGACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTATCGCTGCACACATAACAATTGTCGGGTAAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTGATAACCACTTATGAAGGCAGACATAATCACTCTCCTTGTGACGACTCTAATTCTTCTGAACACGAATGTTTTACCTCTTTTTGA
Protein sequence

>Msa1309180

MEGERDVPNYDLQVSFTNTSQAIHEMGFVQFEENQVLSFLSPSTQSQPSQLSQSLNSGRSTTNATTGAAVTTTTVAAGFSHNDLVTTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGAEKSKAKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF*