Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184760 | XP_013444912.1 | 96.089 | 179 | 7 | 0 | 1 | 179 | 1 | 179 | 2.03e-122 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184760 | sp|Q58FX0|BAP2_ARATH | 33.824 | 204 | 104 | 5 | 1 | 177 | 6 | 205 | 1.69e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1184750 | Msa1184760 | 0.851872 | 6.688034e-61 | -8.615850e-47 |
| Msa1184760 | Msa1323280 | 0.854286 | 1.362030e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184760 | MtrunA17_Chr8g0350211 | 96.089 | 179 | 7 | 0 | 1 | 179 | 1 | 179 | 1.87e-126 | 352 |
| Msa1184760 | MtrunA17_Chr8g0350201 | 91.061 | 179 | 16 | 0 | 1 | 179 | 1 | 179 | 1.04e-109 | 310 |
| Msa1184760 | MtrunA17_Chr8g0350191 | 90.503 | 179 | 17 | 0 | 1 | 179 | 1 | 179 | 1.47e-109 | 310 |
| Msa1184760 | MtrunA17_Chr7g0246561 | 52.198 | 182 | 67 | 5 | 1 | 178 | 1 | 166 | 1.15e-54 | 171 |
| Msa1184760 | MtrunA17_Chr8g0350271 | 37.569 | 181 | 96 | 5 | 2 | 172 | 5 | 178 | 2.95e-28 | 103 |
| Msa1184760 | MtrunA17_Chr8g0350231 | 36.517 | 178 | 97 | 4 | 2 | 169 | 5 | 176 | 2.68e-27 | 101 |
| Msa1184760 | MtrunA17_Chr8g0350221 | 37.017 | 181 | 97 | 6 | 2 | 172 | 5 | 178 | 3.10e-27 | 101 |
| Msa1184760 | MtrunA17_Chr8g0350241 | 35.556 | 180 | 100 | 5 | 2 | 172 | 5 | 177 | 3.68e-25 | 95.9 |
| Msa1184760 | MtrunA17_Chr8g0350291 | 35.556 | 180 | 100 | 5 | 2 | 172 | 5 | 177 | 5.96e-25 | 95.5 |
| Msa1184760 | MtrunA17_Chr3g0109941 | 33.333 | 180 | 104 | 5 | 2 | 172 | 5 | 177 | 6.42e-22 | 87.4 |
| Msa1184760 | MtrunA17_Chr8g0350281 | 32.749 | 171 | 105 | 5 | 2 | 171 | 7 | 168 | 2.08e-20 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184760 | AT2G45760.1 | 33.824 | 204 | 104 | 5 | 1 | 177 | 6 | 205 | 1.72e-32 | 115 |
| Msa1184760 | AT3G61190.1 | 36.757 | 185 | 103 | 5 | 1 | 179 | 16 | 192 | 5.00e-27 | 101 |
| Msa1184760 | AT3G61190.2 | 36.757 | 185 | 103 | 5 | 1 | 179 | 16 | 192 | 5.00e-27 | 101 |
Find 45 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAACAACAAAGCCATAAA+AGG | 0.217867 | 8_1:+20876973 | Msa1184760:CDS |
| TACAATTTCATATGTTTCTT+TGG | 0.248674 | 8_1:-20881998 | None:intergenic |
| TTATGGCTTTGTTGTTCTCT+TGG | 0.294333 | 8_1:-20876969 | None:intergenic |
| ATAATAGAGTTAGGAGAAAT+GGG | 0.321912 | 8_1:+20881814 | Msa1184760:CDS |
| GATAATAGAGTTAGGAGAAA+TGG | 0.337385 | 8_1:+20881813 | Msa1184760:CDS |
| AACCGTCGACGACATCGAAT+TGG | 0.360352 | 8_1:-20881886 | None:intergenic |
| GTTAGTGGAGTTCCGGTAAC+CGG | 0.377246 | 8_1:+20881906 | Msa1184760:CDS |
| TAACAGGAATTCCAGCTGTT+TGG | 0.411065 | 8_1:+20881967 | Msa1184760:CDS |
| TCATGCAGCGGAGTTGTAAC+AGG | 0.413933 | 8_1:+20881951 | Msa1184760:CDS |
| CACATACCCTCCAAGAAAAT+CGG | 0.422233 | 8_1:-20881751 | None:intergenic |
| TCCGCTGCATGAGCCATTAC+CGG | 0.425688 | 8_1:-20881940 | None:intergenic |
| AGTTCCGGTAACCGGGGTTC+CGG | 0.425765 | 8_1:+20881914 | Msa1184760:CDS |
| GTCACCGGAACCCCGGTTAC+CGG | 0.431972 | 8_1:-20881918 | None:intergenic |
| TCGATGTCGTCGACGGTTAG+TGG | 0.453713 | 8_1:+20881891 | Msa1184760:CDS |
| CCTCCAAGAAAATCGGAAAC+AGG | 0.459437 | 8_1:-20881744 | None:intergenic |
| GTCGACGGTTAGTGGAGTTC+CGG | 0.463650 | 8_1:+20881899 | Msa1184760:CDS |
| AGTAGGGTAACTTCCGCCTT+CGG | 0.464742 | 8_1:-20877061 | None:intergenic |
| GGTTGTGGGATAATAGAGTT+AGG | 0.466052 | 8_1:+20881805 | Msa1184760:CDS |
| CCAACTTCTCGTTCCAAGTA+GGG | 0.480749 | 8_1:-20877077 | None:intergenic |
| AAGGCGGAAGTTACCCTACT+TGG | 0.483567 | 8_1:+20877064 | Msa1184760:CDS |
| TGGCAGTTTAACCAAACAGC+TGG | 0.486234 | 8_1:-20881978 | None:intergenic |
| GGTAGTAGTAGTAATAGTGT+TGG | 0.489242 | 8_1:+20881708 | Msa1184760:CDS |
| GCCTTCGGAATCAAGTTTCG+TGG | 0.489360 | 8_1:-20877046 | None:intergenic |
| GTTATGAACCTTGCATGTAA+TGG | 0.492338 | 8_1:-20877111 | None:intergenic |
| TTAGTGGAGTTCCGGTAACC+GGG | 0.492668 | 8_1:+20881907 | Msa1184760:CDS |
| CTCCAATTCGATGTCGTCGA+CGG | 0.499435 | 8_1:+20881884 | Msa1184760:CDS |
| AGAACAACAAAGCCATAAAA+GGG | 0.500399 | 8_1:+20876974 | Msa1184760:CDS |
| GTAACCGGGGTTCCGGTGAC+CGG | 0.511262 | 8_1:+20881921 | Msa1184760:CDS |
| TGCAAGGTTCATAACAATAG+AGG | 0.521084 | 8_1:+20877119 | Msa1184760:CDS |
| TTGGAACGAGAAGTTGGTAA+TGG | 0.534411 | 8_1:+20877083 | Msa1184760:CDS |
| CCCTACTTGGAACGAGAAGT+TGG | 0.543637 | 8_1:+20877077 | Msa1184760:CDS |
| TAGTAGTAATAGTGTTGGAA+TGG | 0.545051 | 8_1:+20881713 | Msa1184760:CDS |
| ACCGGTAATGGCTCATGCAG+CGG | 0.575607 | 8_1:+20881939 | Msa1184760:CDS |
| GGTTGTAAATATTTCAGTGA+AGG | 0.581610 | 8_1:+20881836 | Msa1184760:CDS |
| ACCAACTTCTCGTTCCAAGT+AGG | 0.585914 | 8_1:-20877078 | None:intergenic |
| ATTACCGGTCACCGGAACCC+CGG | 0.605589 | 8_1:-20881925 | None:intergenic |
| TTTGTCACGGTTCAATGTGA+CGG | 0.605787 | 8_1:+20877003 | Msa1184760:CDS |
| GAGGTGAAGTACAAAACAAG+AGG | 0.620322 | 8_1:+20881687 | Msa1184760:intron |
| TGGATGTGCCATTACATGCA+AGG | 0.624126 | 8_1:+20877103 | Msa1184760:CDS |
| ATATCACACGTGTATCGTGA+TGG | 0.630736 | 8_1:-20882066 | None:intergenic |
| ACGAAACTTGATTCCGAAGG+CGG | 0.631770 | 8_1:+20877048 | Msa1184760:CDS |
| AAAAGGGAACACATTTGTCA+CGG | 0.633602 | 8_1:+20876990 | Msa1184760:CDS |
| TAATAGAGTTAGGAGAAATG+GGG | 0.635926 | 8_1:+20881815 | Msa1184760:CDS |
| ACCACGAAACTTGATTCCGA+AGG | 0.642396 | 8_1:+20877045 | Msa1184760:CDS |
| TAGTGGAGTTCCGGTAACCG+GGG | 0.658494 | 8_1:+20881908 | Msa1184760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATAAAAAATAA+GGG | - | chr8_1:20878393-20878412 | None:intergenic | 0.0% |
| !! | AAAAATAAAAATAAAAAATA+AGG | - | chr8_1:20878394-20878413 | None:intergenic | 0.0% |
| !!! | AGTTAATTTTTAGATATTAA+GGG | - | chr8_1:20877695-20877714 | None:intergenic | 10.0% |
| !!! | AAGTTAATTTTTAGATATTA+AGG | - | chr8_1:20877696-20877715 | None:intergenic | 10.0% |
| !! | ATGAATTTCATAATATTATT+TGG | - | chr8_1:20878187-20878206 | None:intergenic | 10.0% |
| !! | AAATAAAGAATAAAGAATAA+GGG | - | chr8_1:20878429-20878448 | None:intergenic | 10.0% |
| !! | TTGATTTAAATAATAACAAT+AGG | - | chr8_1:20878861-20878880 | None:intergenic | 10.0% |
| !!! | ACATATCAATATTTTTTTAA+TGG | - | chr8_1:20879203-20879222 | None:intergenic | 10.0% |
| !!! | TTTATACTTTTAAAGTATTA+TGG | - | chr8_1:20879299-20879318 | None:intergenic | 10.0% |
| !!! | TTTAACTTTAATTTTAAAAG+TGG | + | chr8_1:20880160-20880179 | Msa1184760:intron | 10.0% |
| !! | AATAAATAATAAATGCATAT+AGG | - | chr8_1:20880628-20880647 | None:intergenic | 10.0% |
| !!! | AATTGCAATTTTTAAGTTAT+AGG | + | chr8_1:20877232-20877251 | Msa1184760:intron | 15.0% |
| !! | TAATCAATCATGTATATTAA+AGG | + | chr8_1:20877471-20877490 | Msa1184760:intron | 15.0% |
| !!! | GTTAATTTTTAGATATTAAG+GGG | - | chr8_1:20877694-20877713 | None:intergenic | 15.0% |
| !! | TTCATTGAATTGAAATTAAA+TGG | + | chr8_1:20877801-20877820 | Msa1184760:intron | 15.0% |
| !! | ATAAAAATAAAAAATAAGGG+AGG | - | chr8_1:20878390-20878409 | None:intergenic | 15.0% |
| !! | CAAATAAAGAATAAAGAATA+AGG | - | chr8_1:20878430-20878449 | None:intergenic | 15.0% |
| !! | TTTCTCTATTATTTAAAGAA+GGG | - | chr8_1:20878550-20878569 | None:intergenic | 15.0% |
| !! | ATTTCTCTATTATTTAAAGA+AGG | - | chr8_1:20878551-20878570 | None:intergenic | 15.0% |
| !!! | ACATTTTTTATGTCAAATTT+CGG | + | chr8_1:20878750-20878769 | Msa1184760:intron | 15.0% |
| !!! | GAGTATTTTTTTTATTCTTA+AGG | + | chr8_1:20880338-20880357 | Msa1184760:intron | 15.0% |
| !! | TATTAATTATGGATATCTTT+AGG | - | chr8_1:20880653-20880672 | None:intergenic | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+TGG | - | chr8_1:20880664-20880683 | None:intergenic | 15.0% |
| !!! | AAGTAATAAGTAAATCTTTT+GGG | - | chr8_1:20881366-20881385 | None:intergenic | 15.0% |
| !!! | AATTGCAATTTTTAAGTTAT+AGG | + | chr8_1:20877232-20877251 | Msa1184760:intron | 15.0% |
| !!! | AAAATTGCAATTGATTTTCA+TGG | - | chr8_1:20877224-20877243 | None:intergenic | 20.0% |
| !!! | AATTTTTAAGTTATAGGTTG+TGG | + | chr8_1:20877238-20877257 | Msa1184760:intron | 20.0% |
| !!! | ATTTTTAAGTTATAGGTTGT+GGG | + | chr8_1:20877239-20877258 | Msa1184760:intron | 20.0% |
| !! | AAACTCAACACTAAATATTA+AGG | + | chr8_1:20877612-20877631 | Msa1184760:intron | 20.0% |
| !! | TTTATCTAACCTATTTATAC+AGG | - | chr8_1:20878311-20878330 | None:intergenic | 20.0% |
| !! | GAAATTTGACATAAAAAATG+TGG | - | chr8_1:20878751-20878770 | None:intergenic | 20.0% |
| !!! | AAAAAAATAGGTGTTACAAA+TGG | - | chr8_1:20878778-20878797 | None:intergenic | 20.0% |
| !! | TCATAGTGCAATAAAAAATT+GGG | - | chr8_1:20878993-20879012 | None:intergenic | 20.0% |
| !! | TTCATAGTGCAATAAAAAAT+TGG | - | chr8_1:20878994-20879013 | None:intergenic | 20.0% |
| !! | TTACTATAATTGGAAACTAT+AGG | - | chr8_1:20879508-20879527 | None:intergenic | 20.0% |
| !! | ACTAAAAACGTTACTATAAT+TGG | - | chr8_1:20879518-20879537 | None:intergenic | 20.0% |
| !! | AACAAAATAAAACAACTGAT+TGG | + | chr8_1:20879669-20879688 | Msa1184760:intron | 20.0% |
| !!! | CTTTTTAAATACAATTCAGA+TGG | - | chr8_1:20879946-20879965 | None:intergenic | 20.0% |
| !!! | GTACAAATTTTTAGTCAAAT+GGG | - | chr8_1:20880580-20880599 | None:intergenic | 20.0% |
| !! | AAAAATGTGAAAATAGTAGA+AGG | + | chr8_1:20880788-20880807 | Msa1184760:intron | 20.0% |
| !! | AAAATGTGAAAATAGTAGAA+GGG | + | chr8_1:20880789-20880808 | Msa1184760:intron | 20.0% |
| !! | ATGGATATAGAAATATTTGA+GGG | - | chr8_1:20881198-20881217 | None:intergenic | 20.0% |
| !! | AATGGATATAGAAATATTTG+AGG | - | chr8_1:20881199-20881218 | None:intergenic | 20.0% |
| !! | TTAGAAATAGGATGAAATAA+TGG | - | chr8_1:20881217-20881236 | None:intergenic | 20.0% |
| !!! | CAAGTAATAAGTAAATCTTT+TGG | - | chr8_1:20881367-20881386 | None:intergenic | 20.0% |
| !!! | AATTTTTAAGTTATAGGTTG+TGG | + | chr8_1:20877238-20877257 | Msa1184760:intron | 20.0% |
| !!! | ATTTTTAAGTTATAGGTTGT+GGG | + | chr8_1:20877239-20877258 | Msa1184760:intron | 20.0% |
| !! | TACAATTTCATATGTTTCTT+TGG | - | chr8_1:20882001-20882020 | None:intergenic | 20.0% |
| ! | ATTAGAACAAGAACTTTGTT+GGG | - | chr8_1:20877319-20877338 | None:intergenic | 25.0% |
| ! | AATTAGAACAAGAACTTTGT+TGG | - | chr8_1:20877320-20877339 | None:intergenic | 25.0% |
| !! | ATTTTCATTGACAATACACT+TGG | + | chr8_1:20877506-20877525 | Msa1184760:intron | 25.0% |
| !! | TTTTCATTGACAATACACTT+GGG | + | chr8_1:20877507-20877526 | Msa1184760:intron | 25.0% |
| !! | ATATTAAGGGGTCTAAAATT+CGG | - | chr8_1:20877682-20877701 | None:intergenic | 25.0% |
| ! | TTAACTACTCCTAATCAAAT+AGG | + | chr8_1:20877721-20877740 | Msa1184760:intron | 25.0% |
| !!! | TATTTGTTTTGCGTTTGTTA+CGG | - | chr8_1:20878136-20878155 | None:intergenic | 25.0% |
| !!! | TGAAATTCATTTTGATGCAT+CGG | + | chr8_1:20878197-20878216 | Msa1184760:intron | 25.0% |
| ! | TAAAGAATAAAGAATAAGGG+AGG | - | chr8_1:20878426-20878445 | None:intergenic | 25.0% |
| ! | CTATTATTTAAAGAAGGGAA+GGG | - | chr8_1:20878545-20878564 | None:intergenic | 25.0% |
| ! | TCTATTATTTAAAGAAGGGA+AGG | - | chr8_1:20878546-20878565 | None:intergenic | 25.0% |
| ! | CATAAAAAATGTGGATGTAT+TGG | - | chr8_1:20878742-20878761 | None:intergenic | 25.0% |
| ! | AACTGCAAATATTATTAGCA+AGG | + | chr8_1:20878810-20878829 | Msa1184760:intron | 25.0% |
| ! | CATATAACCAAAAATGAGTT+TGG | - | chr8_1:20879099-20879118 | None:intergenic | 25.0% |
| ! | TTCTAATGACAAATGTTAGT+AGG | - | chr8_1:20879248-20879267 | None:intergenic | 25.0% |
| ! | TGTTTCATATGAAATGTTTG+TGG | + | chr8_1:20879416-20879435 | Msa1184760:intron | 25.0% |
| !! | TCTAAAATTGGACAACATAT+AGG | - | chr8_1:20879478-20879497 | None:intergenic | 25.0% |
| !!! | ATAGGAGCAATTTCTAAAAT+TGG | - | chr8_1:20879490-20879509 | None:intergenic | 25.0% |
| !! | TTTCATTTTACAATGACAGT+TGG | - | chr8_1:20879644-20879663 | None:intergenic | 25.0% |
| ! | TAGTGCTAATGCAAATTAAA+AGG | + | chr8_1:20879786-20879805 | Msa1184760:intron | 25.0% |
| ! | AGTGCTAATGCAAATTAAAA+GGG | + | chr8_1:20879787-20879806 | Msa1184760:intron | 25.0% |
| ! | ATACACACTAAATGTTAAGA+AGG | + | chr8_1:20879862-20879881 | Msa1184760:intron | 25.0% |
| ! | TACACACTAAATGTTAAGAA+GGG | + | chr8_1:20879863-20879882 | Msa1184760:intron | 25.0% |
| !!! | GGTACAAATTTTTAGTCAAA+TGG | - | chr8_1:20880581-20880600 | None:intergenic | 25.0% |
| ! | TTGAAAAACGGTTTACATTT+AGG | - | chr8_1:20880602-20880621 | None:intergenic | 25.0% |
| ! | GCATATAGGAATTTGAAAAA+CGG | - | chr8_1:20880614-20880633 | None:intergenic | 25.0% |
| ! | ACATAGAAACAAAGACAATT+TGG | + | chr8_1:20880714-20880733 | Msa1184760:intron | 25.0% |
| ! | AAATGTGAAAATAGTAGAAG+GGG | + | chr8_1:20880790-20880809 | Msa1184760:intron | 25.0% |
| !!! | TGTTTTTGTTTGCTGAATTT+CGG | + | chr8_1:20881038-20881057 | Msa1184760:intron | 25.0% |
| !! | TTGCTTCTTTTGTAATAGTT+GGG | - | chr8_1:20881085-20881104 | None:intergenic | 25.0% |
| !!! | TTTTGAGAAACAAGAAAGAA+AGG | - | chr8_1:20881125-20881144 | None:intergenic | 25.0% |
| !!! | GAACAAAAAATTGATGATGA+GGG | - | chr8_1:20881279-20881298 | None:intergenic | 25.0% |
| !!! | TGAACAAAAAATTGATGATG+AGG | - | chr8_1:20881280-20881299 | None:intergenic | 25.0% |
| ! | AGAACAAAAAAGCCATAAAA+GGG | + | chr8_1:20881523-20881542 | Msa1184760:intron | 25.0% |
| ! | ATAATAGAGTTAGGAGAAAT+GGG | + | chr8_1:20881814-20881833 | Msa1184760:CDS | 25.0% |
| AGAACAACAAAGCCATAAAA+GGG | + | chr8_1:20876974-20876993 | Msa1184760:CDS | 30.0% | |
| GATAATAGAGTTAGGAGAAA+CGG | + | chr8_1:20877261-20877280 | Msa1184760:intron | 30.0% | |
| ATAATAGAGTTAGGAGAAAC+GGG | + | chr8_1:20877262-20877281 | Msa1184760:intron | 30.0% | |
| GGTTGTAAATATTTCAGTGA+AGG | + | chr8_1:20877284-20877303 | Msa1184760:intron | 30.0% | |
| TACCAAAGACACATTTGAAA+GGG | + | chr8_1:20877441-20877460 | Msa1184760:intron | 30.0% | |
| ! | TATTAAGGGGTCTAAAATTC+GGG | - | chr8_1:20877681-20877700 | None:intergenic | 30.0% |
| ATCAGAACCACGAAATTATA+CGG | + | chr8_1:20877830-20877849 | Msa1184760:intron | 30.0% | |
| ! | TACCGTTGAACATATTTCTA+CGG | + | chr8_1:20877869-20877888 | Msa1184760:intron | 30.0% |
| CATCTAAAGATAATCTGGTA+AGG | - | chr8_1:20878103-20878122 | None:intergenic | 30.0% | |
| CTTACCAGATTATCTTTAGA+TGG | + | chr8_1:20878101-20878120 | Msa1184760:intron | 30.0% | |
| GTTACCATCTAAAGATAATC+TGG | - | chr8_1:20878108-20878127 | None:intergenic | 30.0% | |
| TGAGGTTTATCACTTGTTTA+CGG | - | chr8_1:20878231-20878250 | None:intergenic | 30.0% | |
| ATACAGGTTGTTTGGAAAAT+AGG | - | chr8_1:20878295-20878314 | None:intergenic | 30.0% | |
| TCCAAACAACCTGTATAAAT+AGG | + | chr8_1:20878299-20878318 | Msa1184760:intron | 30.0% | |
| ACCTATTTATACAGGTTGTT+TGG | - | chr8_1:20878303-20878322 | None:intergenic | 30.0% | |
| AACAACACATCAAAAGTTGT+GGG | - | chr8_1:20878336-20878355 | None:intergenic | 30.0% | |
| AAACAACACATCAAAAGTTG+TGG | - | chr8_1:20878337-20878356 | None:intergenic | 30.0% | |
| !! | AAATTGATTTGTGAACAGCA+AGG | + | chr8_1:20878490-20878509 | Msa1184760:intron | 30.0% |
| ATAAGCCTTCAACAAAATCA+CGG | - | chr8_1:20878706-20878725 | None:intergenic | 30.0% | |
| AAAATTGGGTCTAGTAGATA+TGG | - | chr8_1:20878979-20878998 | None:intergenic | 30.0% | |
| AAAAATGAGTTTGGAGGTTT+AGG | - | chr8_1:20879090-20879109 | None:intergenic | 30.0% | |
| ! | TAAACCTCCAAACTCATTTT+TGG | + | chr8_1:20879089-20879108 | Msa1184760:intron | 30.0% |
| ATAACCAAAAATGAGTTTGG+AGG | - | chr8_1:20879096-20879115 | None:intergenic | 30.0% | |
| AAATAAAAACCACATGTCAG+TGG | + | chr8_1:20879383-20879402 | Msa1184760:intron | 30.0% | |
| TACTTGATTGTCTCTTAAGA+AGG | + | chr8_1:20879555-20879574 | Msa1184760:intron | 30.0% | |
| ACTTGATTGTCTCTTAAGAA+GGG | + | chr8_1:20879556-20879575 | Msa1184760:intron | 30.0% | |
| AAACAACTGATTGGAACTTA+CGG | + | chr8_1:20879678-20879697 | Msa1184760:intron | 30.0% | |
| GTGCTAATGCAAATTAAAAG+GGG | + | chr8_1:20879788-20879807 | Msa1184760:intron | 30.0% | |
| TAACATTTAGTGTGTATGTG+TGG | - | chr8_1:20879859-20879878 | None:intergenic | 30.0% | |
| ACACACTAAATGTTAAGAAG+GGG | + | chr8_1:20879864-20879883 | Msa1184760:intron | 30.0% | |
| TAGCGACTAACTAATAACAT+TGG | - | chr8_1:20880069-20880088 | None:intergenic | 30.0% | |
| AATTCTTCCCTATGTCAATT+TGG | + | chr8_1:20880129-20880148 | Msa1184760:intron | 30.0% | |
| TCTTATGGAACTCAAATGAA+CGG | - | chr8_1:20880483-20880502 | None:intergenic | 30.0% | |
| !!! | TAGCTTTTTTGACGTAAATC+AGG | - | chr8_1:20880538-20880557 | None:intergenic | 30.0% |
| TTTAGTCAAATGGGTGTTTA+GGG | - | chr8_1:20880571-20880590 | None:intergenic | 30.0% | |
| ! | TTTTAGTCAAATGGGTGTTT+AGG | - | chr8_1:20880572-20880591 | None:intergenic | 30.0% |
| !! | ATGAGAGCGTTAAAAAAATG+TGG | - | chr8_1:20880936-20880955 | None:intergenic | 30.0% |
| GATTTGAGCTGTTAGAAATA+CGG | - | chr8_1:20880998-20881017 | None:intergenic | 30.0% | |
| ! | TGCTTCTTTTGTAATAGTTG+GGG | - | chr8_1:20881084-20881103 | None:intergenic | 30.0% |
| ! | GTTGCTTCTTTTGTAATAGT+TGG | - | chr8_1:20881086-20881105 | None:intergenic | 30.0% |
| AAAGGTTGAATTGAAGAGAA+GGG | - | chr8_1:20881171-20881190 | None:intergenic | 30.0% | |
| GAAATATTTGAGGGATTGAA+AGG | - | chr8_1:20881189-20881208 | None:intergenic | 30.0% | |
| AAGTGTGAAGGATTAGAAAT+AGG | - | chr8_1:20881229-20881248 | None:intergenic | 30.0% | |
| GAGAACAAAAAAGCCATAAA+AGG | + | chr8_1:20881522-20881541 | Msa1184760:intron | 30.0% | |
| GTTAAGAAACTTGCATGTAA+TGG | - | chr8_1:20881663-20881682 | None:intergenic | 30.0% | |
| TGCAAGTTTCTTAACAATAG+AGG | + | chr8_1:20881668-20881687 | Msa1184760:intron | 30.0% | |
| ! | TAGTAGTAATAGTGTTGGAA+TGG | + | chr8_1:20881713-20881732 | Msa1184760:CDS | 30.0% |
| GATAATAGAGTTAGGAGAAA+TGG | + | chr8_1:20877261-20877280 | Msa1184760:intron | 30.0% | |
| TAATAGAGTTAGGAGAAATG+GGG | + | chr8_1:20881815-20881834 | Msa1184760:CDS | 30.0% | |
| GGTTGTAAATATTTCAGTGA+AGG | + | chr8_1:20877284-20877303 | Msa1184760:intron | 30.0% | |
| ! | ATTGGAGCAAGAATTTTGTT+GGG | - | chr8_1:20881871-20881890 | None:intergenic | 30.0% |
| ! | AATTGGAGCAAGAATTTTGT+TGG | - | chr8_1:20881872-20881891 | None:intergenic | 30.0% |
| ! | AGAGATGACTATTTTGTCAG+CGG | + | chr8_1:20876939-20876958 | Msa1184760:CDS | 35.0% |
| !! | TTATGGCTTTGTTGTTCTCT+TGG | - | chr8_1:20876972-20876991 | None:intergenic | 35.0% |
| GAGAACAACAAAGCCATAAA+AGG | + | chr8_1:20876973-20876992 | Msa1184760:CDS | 35.0% | |
| ! | GACAAATGTGTTCCCTTTTA+TGG | - | chr8_1:20876989-20877008 | None:intergenic | 35.0% |
| AAAAGGGAACACATTTGTCA+CGG | + | chr8_1:20876990-20877009 | Msa1184760:CDS | 35.0% | |
| GTTATGAACCTTGCATGTAA+TGG | - | chr8_1:20877114-20877133 | None:intergenic | 35.0% | |
| TGCAAGGTTCATAACAATAG+AGG | + | chr8_1:20877119-20877138 | Msa1184760:CDS | 35.0% | |
| TAATAGAGTTAGGAGAAACG+GGG | + | chr8_1:20877263-20877282 | Msa1184760:intron | 35.0% | |
| ! | AATTCGATGTCATCGATTAG+TGG | + | chr8_1:20877336-20877355 | Msa1184760:intron | 35.0% |
| CTACCAAAGACACATTTGAA+AGG | + | chr8_1:20877440-20877459 | Msa1184760:intron | 35.0% | |
| GAACGCAAACCTATTTGATT+AGG | - | chr8_1:20877733-20877752 | None:intergenic | 35.0% | |
| ! | ATTTGAGATGACTGATTGAG+AGG | - | chr8_1:20877761-20877780 | None:intergenic | 35.0% |
| GTCATCTCAAATTGTACTTC+TGG | + | chr8_1:20877769-20877788 | Msa1184760:intron | 35.0% | |
| TCAGAACCACGAAATTATAC+GGG | + | chr8_1:20877831-20877850 | Msa1184760:intron | 35.0% | |
| CACCGTAGAAATATGTTCAA+CGG | - | chr8_1:20877874-20877893 | None:intergenic | 35.0% | |
| AACTTCATCAGACAACTGTT+AGG | + | chr8_1:20877999-20878018 | Msa1184760:intron | 35.0% | |
| ACTTCATCAGACAACTGTTA+GGG | + | chr8_1:20878000-20878019 | Msa1184760:intron | 35.0% | |
| ! | AATGTTTTCCTCAAAACCGT+AGG | + | chr8_1:20878037-20878056 | Msa1184760:intron | 35.0% |
| ! | AATGTTTGTGTCATTGCCTA+CGG | - | chr8_1:20878056-20878075 | None:intergenic | 35.0% |
| AAAGATAATCTGGTAAGGCA+TGG | - | chr8_1:20878098-20878117 | None:intergenic | 35.0% | |
| CAAAGGTTACATTGTCAATG+AGG | - | chr8_1:20878249-20878268 | None:intergenic | 35.0% | |
| TGACAACTAACATCTGACAA+AGG | - | chr8_1:20878266-20878285 | None:intergenic | 35.0% | |
| ATTTAAAGAAGGGAAGGGAT+GGG | - | chr8_1:20878540-20878559 | None:intergenic | 35.0% | |
| TATTTAAAGAAGGGAAGGGA+TGG | - | chr8_1:20878541-20878560 | None:intergenic | 35.0% | |
| ! | TGAAACCGTGATTTTGTTGA+AGG | + | chr8_1:20878698-20878717 | Msa1184760:intron | 35.0% |
| CACTATGAATGCAACAATGA+AGG | + | chr8_1:20879005-20879024 | Msa1184760:intron | 35.0% | |
| AATCATCCTTGAAGTATGCA+CGG | + | chr8_1:20879028-20879047 | Msa1184760:intron | 35.0% | |
| CTTGATTGTCTCTTAAGAAG+GGG | + | chr8_1:20879557-20879576 | Msa1184760:intron | 35.0% | |
| ATTGTGTTTCCAAGGAACAA+GGG | + | chr8_1:20879586-20879605 | Msa1184760:intron | 35.0% | |
| GAGGAGAAATACACTCAAAA+TGG | - | chr8_1:20880096-20880115 | None:intergenic | 35.0% | |
| TGTATTTCTCCTCAAAGTCT+CGG | + | chr8_1:20880103-20880122 | Msa1184760:intron | 35.0% | |
| TAGCTCACCAAATTGACATA+GGG | - | chr8_1:20880139-20880158 | None:intergenic | 35.0% | |
| TGAATTCGAACTCAAGACTT+TGG | - | chr8_1:20880417-20880436 | None:intergenic | 35.0% | |
| AGTAGAAGGGGTTTACATAT+AGG | + | chr8_1:20880802-20880821 | Msa1184760:intron | 35.0% | |
| AAGGGGTTTACATATAGGAA+CGG | + | chr8_1:20880807-20880826 | Msa1184760:intron | 35.0% | |
| AATTCCACCGTCAAGTATAA+CGG | + | chr8_1:20880910-20880929 | Msa1184760:intron | 35.0% | |
| ! | GCTTCTTTTGTAATAGTTGG+GGG | - | chr8_1:20881083-20881102 | None:intergenic | 35.0% |
| GGGAGGATGGTTTATATAAA+TGG | - | chr8_1:20881150-20881169 | None:intergenic | 35.0% | |
| AAGGTTGAATTGAAGAGAAG+GGG | - | chr8_1:20881170-20881189 | None:intergenic | 35.0% | |
| GAAAGGTTGAATTGAAGAGA+AGG | - | chr8_1:20881172-20881191 | None:intergenic | 35.0% | |
| ! | GGGTCAGCTAATTTTTATTG+TGG | - | chr8_1:20881259-20881278 | None:intergenic | 35.0% |
| GGTAGTAGTAGTAATAGTGT+TGG | + | chr8_1:20881708-20881727 | Msa1184760:CDS | 35.0% | |
| ! | ATACCTGTTTCCGATTTTCT+TGG | + | chr8_1:20881741-20881760 | Msa1184760:CDS | 35.0% |
| TTTGTCACGGTTCAATGTGA+CGG | + | chr8_1:20877003-20877022 | Msa1184760:CDS | 40.0% | |
| !! | TTGGAACGAGAAGTTGGTAA+TGG | + | chr8_1:20877083-20877102 | Msa1184760:CDS | 40.0% |
| !! | AAGTAGTAGCAGTGTTGGTA+TGG | + | chr8_1:20877161-20877180 | Msa1184760:intron | 40.0% |
| TGTTGGTATGGCTAGAATAC+CGG | + | chr8_1:20877173-20877192 | Msa1184760:intron | 40.0% | |
| !!! | ATACCGGTTTCCGATTTTCT+TGG | + | chr8_1:20877189-20877208 | Msa1184760:intron | 40.0% |
| GACATACCCTCCAAGAAAAT+CGG | - | chr8_1:20877202-20877221 | None:intergenic | 40.0% | |
| GGTTGTGGGATAATAGAGTT+AGG | + | chr8_1:20877253-20877272 | Msa1184760:intron | 40.0% | |
| TGGTAGTTTAACCAAACAGC+AGG | - | chr8_1:20877426-20877445 | None:intergenic | 40.0% | |
| CACCCTTTCAAATGTGTCTT+TGG | - | chr8_1:20877446-20877465 | None:intergenic | 40.0% | |
| GTTACACCCGTATAATTTCG+TGG | - | chr8_1:20877840-20877859 | None:intergenic | 40.0% | |
| TTATCACTTGTTTACGGCAG+TGG | - | chr8_1:20878225-20878244 | None:intergenic | 40.0% | |
| CAGGTTGTTTGGAAAATAGG+TGG | - | chr8_1:20878292-20878311 | None:intergenic | 40.0% | |
| ATAATGCCGTGCATACTTCA+AGG | - | chr8_1:20879037-20879056 | None:intergenic | 40.0% | |
| CTTGTTCCTTGGAAACACAA+TGG | - | chr8_1:20879587-20879606 | None:intergenic | 40.0% | |
| CATTGTGTTTCCAAGGAACA+AGG | + | chr8_1:20879585-20879604 | Msa1184760:intron | 40.0% | |
| TTGTGTTTCCAAGGAACAAG+GGG | + | chr8_1:20879587-20879606 | Msa1184760:intron | 40.0% | |
| ! | TACGGAGTACTTAGCAACAT+AGG | + | chr8_1:20879696-20879715 | Msa1184760:intron | 40.0% |
| ! | ACGGAGTACTTAGCAACATA+GGG | + | chr8_1:20879697-20879716 | Msa1184760:intron | 40.0% |
| AGAATTGAACCGAGACTTTG+AGG | - | chr8_1:20880115-20880134 | None:intergenic | 40.0% | |
| GTAGCTCACCAAATTGACAT+AGG | - | chr8_1:20880140-20880159 | None:intergenic | 40.0% | |
| CATCTCATCAAAACGCTCTT+GGG | - | chr8_1:20880377-20880396 | None:intergenic | 40.0% | |
| TCATCTCATCAAAACGCTCT+TGG | - | chr8_1:20880378-20880397 | None:intergenic | 40.0% | |
| AACTACTCTGTCGAGTCTTA+TGG | - | chr8_1:20880498-20880517 | None:intergenic | 40.0% | |
| GGTTTACATATAGGAACGGA+GGG | + | chr8_1:20880811-20880830 | Msa1184760:intron | 40.0% | |
| ACTTGACGGTGGAATTTAGT+AGG | - | chr8_1:20880906-20880925 | None:intergenic | 40.0% | |
| AATGTGGCCGTTATACTTGA+CGG | - | chr8_1:20880920-20880939 | None:intergenic | 40.0% | |
| ! | TGTGGAAGAGAAAAGTGTGA+AGG | - | chr8_1:20881241-20881260 | None:intergenic | 40.0% |
| !! | TGAGATTAGTCTCTAACCGT+CGG | + | chr8_1:20881323-20881342 | Msa1184760:intron | 40.0% |
| ! | GACGAATGTGTTCCCTTTTA+TGG | - | chr8_1:20881538-20881557 | None:intergenic | 40.0% |
| AAAAGGGAACACATTCGTCA+CGG | + | chr8_1:20881539-20881558 | Msa1184760:intron | 40.0% | |
| CCAACTTCTCGTTTCATGTA+GGG | - | chr8_1:20881629-20881648 | None:intergenic | 40.0% | |
| ACCAACTTCTCGTTTCATGT+AGG | - | chr8_1:20881630-20881649 | None:intergenic | 40.0% | |
| GAGGTGAAGTACAAAACAAG+AGG | + | chr8_1:20881687-20881706 | Msa1184760:intron | 40.0% | |
| ! | CTGTTTCCGATTTTCTTGGA+GGG | + | chr8_1:20881745-20881764 | Msa1184760:CDS | 40.0% |
| CACATACCCTCCAAGAAAAT+CGG | - | chr8_1:20881754-20881773 | None:intergenic | 40.0% | |
| GGTTGTGGGATAATAGAGTT+AGG | + | chr8_1:20877253-20877272 | Msa1184760:intron | 40.0% | |
| TAACAGGAATTCCAGCTGTT+TGG | + | chr8_1:20881967-20881986 | Msa1184760:CDS | 40.0% | |
| ACCACGAAACTTGATTCCGA+AGG | + | chr8_1:20877045-20877064 | Msa1184760:CDS | 45.0% | |
| ACGAAACTTGATTCCGAAGG+CGG | + | chr8_1:20877048-20877067 | Msa1184760:CDS | 45.0% | |
| CCAACTTCTCGTTCCAAGTA+GGG | - | chr8_1:20877080-20877099 | None:intergenic | 45.0% | |
| ACCAACTTCTCGTTCCAAGT+AGG | - | chr8_1:20877081-20877100 | None:intergenic | 45.0% | |
| ! | TGGATGTGCCATTACATGCA+AGG | + | chr8_1:20877103-20877122 | Msa1184760:CDS | 45.0% |
| GAGGTGAAGTGCAAAACTAG+AGG | + | chr8_1:20877138-20877157 | Msa1184760:intron | 45.0% | |
| AGAGGAAGTAGTAGCAGTGT+TGG | + | chr8_1:20877156-20877175 | Msa1184760:intron | 45.0% | |
| CCTCCAAGAAAATCGGAAAC+CGG | - | chr8_1:20877195-20877214 | None:intergenic | 45.0% | |
| ! | CGGTTTCCGATTTTCTTGGA+GGG | + | chr8_1:20877193-20877212 | Msa1184760:intron | 45.0% |
| ! | GTCATCGATTAGTGGAGTTC+CGG | + | chr8_1:20877344-20877363 | Msa1184760:intron | 45.0% |
| ATTAGTGGAGTTCCGGTAAC+TGG | + | chr8_1:20877351-20877370 | Msa1184760:intron | 45.0% | |
| ! | TGTCATTGCCTACGGTTTTG+AGG | - | chr8_1:20878048-20878067 | None:intergenic | 45.0% |
| AAGGTTAGCACGAGATAGCA+AGG | + | chr8_1:20878829-20878848 | Msa1184760:intron | 45.0% | |
| GTAGATATGGAGACAGGTCA+TGG | - | chr8_1:20878966-20878985 | None:intergenic | 45.0% | |
| GGTCTAGTAGATATGGAGAC+AGG | - | chr8_1:20878972-20878991 | None:intergenic | 45.0% | |
| !! | CACACGCTCTGAAATAGACA+TGG | + | chr8_1:20879119-20879138 | Msa1184760:intron | 45.0% |
| GGTCAACCATTGTGTTTCCA+AGG | + | chr8_1:20879578-20879597 | Msa1184760:intron | 45.0% | |
| ! | CGGAGTACTTAGCAACATAG+GGG | + | chr8_1:20879698-20879717 | Msa1184760:intron | 45.0% |
| ! | GACAGAGTAGTTTTCGCAGT+CGG | + | chr8_1:20880506-20880525 | Msa1184760:intron | 45.0% |
| GTCAAATGGGTGTTTAGGGA+CGG | - | chr8_1:20880567-20880586 | None:intergenic | 45.0% | |
| GGGTTTACATATAGGAACGG+AGG | + | chr8_1:20880810-20880829 | Msa1184760:intron | 45.0% | |
| GAAAGGAGAGAGAAAGAGAG+TGG | - | chr8_1:20881108-20881127 | None:intergenic | 45.0% | |
| AATTGAAGAGAAGGGGAGGA+TGG | - | chr8_1:20881163-20881182 | None:intergenic | 45.0% | |
| GTTGAATTGAAGAGAAGGGG+AGG | - | chr8_1:20881167-20881186 | None:intergenic | 45.0% | |
| TTCGTCACGGTTCAATGTGA+CGG | + | chr8_1:20881552-20881571 | Msa1184760:intron | 45.0% | |
| ACCACGAAACTTGATTCCGA+AGG | + | chr8_1:20877045-20877064 | Msa1184760:CDS | 45.0% | |
| ACCTTCGGAATCAAGTTTCG+TGG | - | chr8_1:20881598-20881617 | None:intergenic | 45.0% | |
| ACGAAACTTGATTCCGAAGG+TGG | + | chr8_1:20877048-20877067 | Msa1184760:CDS | 45.0% | |
| TGTAGGGTAACTTCCACCTT+CGG | - | chr8_1:20881613-20881632 | None:intergenic | 45.0% | |
| CCCTACATGAAACGAGAAGT+TGG | + | chr8_1:20881626-20881645 | Msa1184760:intron | 45.0% | |
| CCTCCAAGAAAATCGGAAAC+AGG | - | chr8_1:20877195-20877214 | None:intergenic | 45.0% | |
| ! | CCTGTTTCCGATTTTCTTGG+AGG | + | chr8_1:20881744-20881763 | Msa1184760:CDS | 45.0% |
| TGGCAGTTTAACCAAACAGC+TGG | - | chr8_1:20881981-20882000 | None:intergenic | 45.0% | |
| !! | TCAAAAAAAAAAAAAAAAAT+AGG | - | chr8_1:20878790-20878809 | None:intergenic | 5.0% |
| GCCTTCGGAATCAAGTTTCG+TGG | - | chr8_1:20877049-20877068 | None:intergenic | 50.0% | |
| AGTAGGGTAACTTCCGCCTT+CGG | - | chr8_1:20877064-20877083 | None:intergenic | 50.0% | |
| AAGGCGGAAGTTACCCTACT+TGG | + | chr8_1:20877064-20877083 | Msa1184760:CDS | 50.0% | |
| CCCTACTTGGAACGAGAAGT+TGG | + | chr8_1:20877077-20877096 | Msa1184760:CDS | 50.0% | |
| ! | CCGGTTTCCGATTTTCTTGG+AGG | + | chr8_1:20877192-20877211 | Msa1184760:intron | 50.0% |
| AGTTCCGGTAACTGGTGTTC+CGG | + | chr8_1:20877359-20877378 | Msa1184760:intron | 50.0% | |
| CAACAGGGATTCCTGCTGTT+TGG | + | chr8_1:20877412-20877431 | Msa1184760:intron | 50.0% | |
| AAGAAGGGAAGGGATGGGAT+GGG | - | chr8_1:20878535-20878554 | None:intergenic | 50.0% | |
| AAAGAAGGGAAGGGATGGGA+TGG | - | chr8_1:20878536-20878555 | None:intergenic | 50.0% | |
| GCATGATGTCCACTGACATG+TGG | - | chr8_1:20879395-20879414 | None:intergenic | 50.0% | |
| AATGGGTGTTTAGGGACGGA+GGG | - | chr8_1:20880563-20880582 | None:intergenic | 50.0% | |
| AAATGGGTGTTTAGGGACGG+AGG | - | chr8_1:20880564-20880583 | None:intergenic | 50.0% | |
| TTCACACGTTCAAACACGCG+CGG | + | chr8_1:20880968-20880987 | Msa1184760:intron | 50.0% | |
| GACTTCACGTATTCGACCGA+CGG | - | chr8_1:20881342-20881361 | None:intergenic | 50.0% | |
| TCAATGTGACGGTAGCAACG+AGG | + | chr8_1:20881563-20881582 | Msa1184760:intron | 50.0% | |
| CTCCAATTCGATGTCGTCGA+CGG | + | chr8_1:20881884-20881903 | Msa1184760:CDS | 50.0% | |
| AACCGTCGACGACATCGAAT+TGG | - | chr8_1:20881889-20881908 | None:intergenic | 50.0% | |
| GTTAGTGGAGTTCCGGTAAC+CGG | + | chr8_1:20881906-20881925 | Msa1184760:CDS | 50.0% | |
| TTAGTGGAGTTCCGGTAACC+GGG | + | chr8_1:20881907-20881926 | Msa1184760:CDS | 50.0% | |
| TCATGCAGCGGAGTTGTAAC+AGG | + | chr8_1:20881951-20881970 | Msa1184760:CDS | 50.0% | |
| TCTGCTGCAGGAGCCATTAC+CGG | - | chr8_1:20877388-20877407 | None:intergenic | 55.0% | |
| TCCTGCAGCAGAGTTGCAAC+AGG | + | chr8_1:20877396-20877415 | Msa1184760:intron | 55.0% | |
| CCTGCAGCAGAGTTGCAACA+GGG | + | chr8_1:20877397-20877416 | Msa1184760:intron | 55.0% | |
| AGTCAGCTCCCCTTGTTCCT+TGG | - | chr8_1:20879598-20879617 | None:intergenic | 55.0% | |
| GTGGCCGTTATACTTGACGG+TGG | - | chr8_1:20880917-20880936 | None:intergenic | 55.0% | |
| TCGATGTCGTCGACGGTTAG+TGG | + | chr8_1:20881891-20881910 | Msa1184760:CDS | 55.0% | |
| GTCGACGGTTAGTGGAGTTC+CGG | + | chr8_1:20881899-20881918 | Msa1184760:CDS | 55.0% | |
| TAGTGGAGTTCCGGTAACCG+GGG | + | chr8_1:20881908-20881927 | Msa1184760:CDS | 55.0% | |
| CATGAGCCATTACCGGTCAC+CGG | - | chr8_1:20881936-20881955 | None:intergenic | 55.0% | |
| ! | ACCGGTAATGGCTCATGCAG+CGG | + | chr8_1:20881939-20881958 | Msa1184760:CDS | 55.0% |
| TCCGCTGCATGAGCCATTAC+CGG | - | chr8_1:20881943-20881962 | None:intergenic | 55.0% | |
| TCCGGTAACTGGTGTTCCGG+TGG | + | chr8_1:20877362-20877381 | Msa1184760:intron | 60.0% | |
| GCCACCGGAACACCAGTTAC+CGG | - | chr8_1:20877366-20877385 | None:intergenic | 60.0% | |
| GTAACTGGTGTTCCGGTGGC+CGG | + | chr8_1:20877366-20877385 | Msa1184760:intron | 60.0% | |
| CCCTGTTGCAACTCTGCTGC+AGG | - | chr8_1:20877400-20877419 | None:intergenic | 60.0% | |
| AGTTCCGGTAACCGGGGTTC+CGG | + | chr8_1:20881914-20881933 | Msa1184760:CDS | 60.0% | |
| ATTACCGGTCACCGGAACCC+CGG | - | chr8_1:20881928-20881947 | None:intergenic | 60.0% | |
| GGTGTTCCGGTGGCCGGTAA+TGG | + | chr8_1:20877372-20877391 | Msa1184760:intron | 65.0% | |
| CAGGAGCCATTACCGGCCAC+CGG | - | chr8_1:20877381-20877400 | None:intergenic | 65.0% | |
| GTCACCGGAACCCCGGTTAC+CGG | - | chr8_1:20881921-20881940 | None:intergenic | 65.0% | |
| GTAACCGGGGTTCCGGTGAC+CGG | + | chr8_1:20881921-20881940 | Msa1184760:CDS | 65.0% | |
| GGGGTTCCGGTGACCGGTAA+TGG | + | chr8_1:20881927-20881946 | Msa1184760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 20876925 | 20882073 | 20876925 | ID=Msa1184760;Name=Msa1184760 |
| chr8_1 | mRNA | 20876925 | 20882073 | 20876925 | ID=Msa1184760-mRNA-1;Parent=Msa1184760;Name=Msa1184760-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|1|0.5|1|0|0|2|60|179 |
| chr8_1 | exon | 20876925 | 20877140 | 20876925 | ID=Msa1184760-mRNA-1:exon:7936;Parent=Msa1184760-mRNA-1 |
| chr8_1 | exon | 20881690 | 20882073 | 20881690 | ID=Msa1184760-mRNA-1:exon:7937;Parent=Msa1184760-mRNA-1 |
| chr8_1 | CDS | 20876925 | 20877140 | 20876925 | ID=Msa1184760-mRNA-1:cds;Parent=Msa1184760-mRNA-1 |
| chr8_1 | CDS | 20881690 | 20882013 | 20881690 | ID=Msa1184760-mRNA-1:cds;Parent=Msa1184760-mRNA-1 |
| chr8_1 | three_prime_UTR | 20882014 | 20882073 | 20882014 | ID=Msa1184760-mRNA-1:three_prime_utr;Parent=Msa1184760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
