Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188780 | XP_039685447.1 | 98.450 | 387 | 6 | 0 | 1 | 387 | 48 | 434 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188780 | sp|B4RRY8|RLMI_ALTMD | 34.625 | 387 | 239 | 6 | 2 | 387 | 22 | 395 | 1.47e-65 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188780 | A0A396GHL0 | 98.450 | 387 | 6 | 0 | 1 | 387 | 48 | 434 | 0.0 | 786 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030380 | Msa1188780 | 0.801047 | 1.082430e-48 | -8.615850e-47 |
| Msa0173740 | Msa1188780 | 0.803546 | 3.310726e-49 | -8.615850e-47 |
| Msa0173820 | Msa1188780 | 0.807261 | 5.511649e-50 | -8.615850e-47 |
| Msa1188780 | Msa1323880 | 0.867877 | 9.897568e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188780 | MtrunA17_Chr8g0356991 | 98.450 | 387 | 6 | 0 | 1 | 387 | 48 | 434 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1188780 | AT1G54310.2 | 73.316 | 386 | 103 | 0 | 1 | 386 | 68 | 453 | 0.0 | 621 |
| Msa1188780 | AT1G54310.1 | 72.727 | 176 | 48 | 0 | 1 | 176 | 51 | 226 | 3.93e-94 | 282 |
Find 97 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACATACCTTTGTTCTTTC+AGG | 0.131889 | 8_1:+29417116 | None:intergenic |
| CTCTTTCAGATTATGGAAAA+TGG | 0.172930 | 8_1:-29416234 | Msa1188780:intron |
| GGGGAAGACGCAACTCTTTA+AGG | 0.181754 | 8_1:-29418046 | Msa1188780:five_prime_UTR |
| TTGATGACCTGTTCCTGTTC+TGG | 0.234494 | 8_1:-29413069 | Msa1188780:CDS |
| ACTATATCAATCATATAAAT+TGG | 0.237392 | 8_1:-29417214 | Msa1188780:CDS |
| CATATTCATGCGTATCTTAC+AGG | 0.288345 | 8_1:-29413028 | Msa1188780:intron |
| GGGTTGATAGTTGATGTATT+TGG | 0.291687 | 8_1:-29417317 | Msa1188780:CDS |
| AGTTGCATCTTCTTTCAAAA+AGG | 0.293841 | 8_1:+29414766 | None:intergenic |
| CCGCTGTTGAATTGCGTAGA+AGG | 0.300401 | 8_1:-29417715 | Msa1188780:CDS |
| TAAACTGGCACCTTCGAAAA+AGG | 0.306564 | 8_1:-29414681 | Msa1188780:intron |
| CTTGATCTTTGTTGCTATAG+TGG | 0.307349 | 8_1:-29416108 | Msa1188780:CDS |
| TTGGTTAGGTATGCGCCTTC+CGG | 0.315334 | 8_1:+29412039 | None:intergenic |
| TGGTTACCGATATAATATTA+TGG | 0.333132 | 8_1:+29418234 | None:intergenic |
| CTGAAACTCTTGATATAAAC+TGG | 0.352092 | 8_1:+29416145 | None:intergenic |
| AGAACAATATCGCCTGTCTT+AGG | 0.354908 | 8_1:+29417967 | None:intergenic |
| TGGTTAGGTATGCGCCTTCC+GGG | 0.374670 | 8_1:+29412040 | None:intergenic |
| TCCTTTAAAATATCAATAGA+TGG | 0.375715 | 8_1:+29417188 | None:intergenic |
| CTCTTATGAGAGATGAATCT+TGG | 0.380181 | 8_1:-29414727 | Msa1188780:CDS |
| CGGTTTCTATGTTCTCTGTT+CGG | 0.387086 | 8_1:-29417897 | Msa1188780:CDS |
| CATCATTGATCCTCCTAAAC+TGG | 0.398344 | 8_1:-29414696 | Msa1188780:CDS |
| CAGGCTCTACACGGTGCATC+TGG | 0.422808 | 8_1:-29413147 | Msa1188780:CDS |
| ATCACTGTTCTAAGAGATGC+TGG | 0.440246 | 8_1:-29412096 | Msa1188780:CDS |
| TTGTACAAGCCCCAGCCTAT+TGG | 0.442809 | 8_1:+29417922 | None:intergenic |
| TAGTAGCGTCATCTGCTGCT+TGG | 0.443427 | 8_1:-29417283 | Msa1188780:CDS |
| GTTGAATTGCGTAGAAGGTT+GGG | 0.444805 | 8_1:-29417710 | Msa1188780:CDS |
| ACGCATGAATATGCCACTTT+GGG | 0.445671 | 8_1:+29413038 | None:intergenic |
| ATGAATAGTTTGGGTTTGGT+AGG | 0.446435 | 8_1:-29418093 | Msa1188780:intron |
| ACGATGCCATAATATTATAT+CGG | 0.446850 | 8_1:-29418240 | Msa1188780:intron |
| TGTTGAATTGCGTAGAAGGT+TGG | 0.459706 | 8_1:-29417711 | Msa1188780:CDS |
| GGAGCTGTCGATAGAATTAT+CGG | 0.461674 | 8_1:-29418000 | Msa1188780:CDS |
| TACGCATGAATATGCCACTT+TGG | 0.462765 | 8_1:+29413037 | None:intergenic |
| GTACAGAAATTTGAATTCGT+TGG | 0.477263 | 8_1:-29413121 | Msa1188780:CDS |
| GACTGAGAAACCAATAGGCT+GGG | 0.478911 | 8_1:-29417932 | Msa1188780:CDS |
| CTCTTAACAGAATGTTGGTT+AGG | 0.479278 | 8_1:+29412025 | None:intergenic |
| TCCGGGTATGATGGATCAAT+AGG | 0.479350 | 8_1:+29412057 | None:intergenic |
| TTGGGTCACAGCTCCAGAAC+AGG | 0.480265 | 8_1:+29413056 | None:intergenic |
| CACAGCTCCAGAACAGGAAC+AGG | 0.482052 | 8_1:+29413062 | None:intergenic |
| AGTAGCGTCATCTGCTGCTT+GGG | 0.483757 | 8_1:-29417282 | Msa1188780:CDS |
| GGACTGAGAAACCAATAGGC+TGG | 0.486780 | 8_1:-29417933 | Msa1188780:CDS |
| AAGAGTTTCAGATGGTCAAA+AGG | 0.488695 | 8_1:-29416133 | Msa1188780:CDS |
| TCTTATGAGAGATGAATCTT+GGG | 0.497235 | 8_1:-29414726 | Msa1188780:CDS |
| TAATCAATAGTGAGGGTGAC+AGG | 0.498128 | 8_1:-29417655 | Msa1188780:intron |
| GGCATCGTTTGATCCACGTA+GGG | 0.502863 | 8_1:+29418255 | None:intergenic |
| TGAAACTCTTAACAGAATGT+TGG | 0.506506 | 8_1:+29412020 | None:intergenic |
| GGGTTTGGTAGGTGTTGCAA+AGG | 0.511341 | 8_1:-29418082 | Msa1188780:five_prime_UTR |
| AGATGCAACTCAATTTATGA+AGG | 0.511957 | 8_1:-29414753 | Msa1188780:CDS |
| TCACTGGCAGGACAGAAGAC+AGG | 0.512939 | 8_1:-29416195 | Msa1188780:CDS |
| GTACTTAACAACATTGATCC+AGG | 0.515249 | 8_1:-29414797 | Msa1188780:CDS |
| GATGGGACTGAGAAACCAAT+AGG | 0.515526 | 8_1:-29417937 | Msa1188780:CDS |
| TATGCGCCTTCCGGGTATGA+TGG | 0.518026 | 8_1:+29412048 | None:intergenic |
| TTCGAAGGTGCCAGTTTAGG+AGG | 0.519285 | 8_1:+29414686 | None:intergenic |
| AGTTAATGTGTCTGATTCAA+AGG | 0.520594 | 8_1:-29417159 | Msa1188780:CDS |
| ACAGCTCCACTGTATACCAT+TGG | 0.521242 | 8_1:+29418015 | None:intergenic |
| CAGCTCCACTGTATACCATT+GGG | 0.525162 | 8_1:+29418016 | None:intergenic |
| TGCAAAGGTTGTGCTAAAGA+AGG | 0.528824 | 8_1:-29418067 | Msa1188780:five_prime_UTR |
| TTTGCAAAGGACCGTGACAT+TGG | 0.529198 | 8_1:+29411838 | None:intergenic |
| CAGAGATAGAGACATGCATA+AGG | 0.530424 | 8_1:-29417244 | Msa1188780:CDS |
| AATTGTGTACACAATTTCAC+TGG | 0.536833 | 8_1:-29416211 | Msa1188780:CDS |
| GGCGGTGCTCTAAATGTCAC+TGG | 0.537655 | 8_1:-29416060 | Msa1188780:intron |
| AGCTTGAAGACGAAGCTACC+AGG | 0.540936 | 8_1:-29417867 | Msa1188780:intron |
| GATATTGTTCTAGTATCAGA+TGG | 0.544300 | 8_1:-29417955 | Msa1188780:CDS |
| GTGTACACAATTTCACTGGC+AGG | 0.546304 | 8_1:-29416207 | Msa1188780:CDS |
| GCAAAGGTTGTGCTAAAGAA+GGG | 0.548470 | 8_1:-29418066 | Msa1188780:five_prime_UTR |
| GGTAGGCCGCCTCCTAAGAC+AGG | 0.557659 | 8_1:-29417979 | Msa1188780:CDS |
| GATCTTTGTTGCTATAGTGG+TGG | 0.558098 | 8_1:-29416105 | Msa1188780:CDS |
| TCTTTAGCAAGCTCAAGAGC+TGG | 0.568312 | 8_1:+29414827 | None:intergenic |
| ATATCAATCATATAAATTGG+AGG | 0.571811 | 8_1:-29417211 | Msa1188780:CDS |
| TTAGACGATACGCATTCGTA+TGG | 0.574225 | 8_1:+29417675 | None:intergenic |
| TTCAGCATGTGCATTGAACA+TGG | 0.582218 | 8_1:-29417765 | Msa1188780:CDS |
| TACGCATTCGTATGGACAGA+AGG | 0.584507 | 8_1:+29417683 | None:intergenic |
| TCCTATTGATCCATCATACC+CGG | 0.585246 | 8_1:-29412058 | Msa1188780:CDS |
| TTTATATCAAGAGTTTCAGA+TGG | 0.586095 | 8_1:-29416141 | Msa1188780:CDS |
| ATATCGCCTGTCTTAGGAGG+CGG | 0.587671 | 8_1:+29417973 | None:intergenic |
| ACAATATCGCCTGTCTTAGG+AGG | 0.593173 | 8_1:+29417970 | None:intergenic |
| CACTGGCAGGACAGAAGACA+GGG | 0.599330 | 8_1:-29416194 | Msa1188780:CDS |
| AGGCTGGGGCTTGTACAACT+CGG | 0.599441 | 8_1:-29417917 | Msa1188780:CDS |
| CTTTAAGGATGGCAACCCAA+TGG | 0.617852 | 8_1:-29418031 | Msa1188780:exon |
| AAGACGCAACTCTTTAAGGA+TGG | 0.618837 | 8_1:-29418042 | Msa1188780:five_prime_UTR |
| ACTGAGAAACCAATAGGCTG+GGG | 0.620801 | 8_1:-29417931 | Msa1188780:CDS |
| TCTGGAGCTGTGACCCAAAG+TGG | 0.628403 | 8_1:-29413051 | Msa1188780:CDS |
| AATAAAATGAGCCAGTCCGA+CGG | 0.631223 | 8_1:+29418333 | None:intergenic |
| GATGCAACTCAATTTATGAA+GGG | 0.634394 | 8_1:-29414752 | Msa1188780:CDS |
| TACTTGTCCTGAAAGAACAA+AGG | 0.638279 | 8_1:-29417123 | Msa1188780:intron |
| CAAAGGTTGTGCTAAAGAAG+GGG | 0.644925 | 8_1:-29418065 | Msa1188780:five_prime_UTR |
| GCTCTAAATGCAGTGCGTGG+CGG | 0.645141 | 8_1:-29416078 | Msa1188780:CDS |
| GTATCGTCTAATCAATAGTG+AGG | 0.646042 | 8_1:-29417663 | Msa1188780:CDS |
| ATATTGTTCTAGTATCAGAT+GGG | 0.654354 | 8_1:-29417954 | Msa1188780:CDS |
| CATTCATGAAGCCAATGTCA+CGG | 0.654440 | 8_1:-29411849 | Msa1188780:three_prime_UTR |
| GGCAACCCAATGGTATACAG+TGG | 0.667523 | 8_1:-29418021 | Msa1188780:exon |
| TGGCATCGTTTGATCCACGT+AGG | 0.667998 | 8_1:+29418254 | None:intergenic |
| ATTGATCCATCATACCCGGA+AGG | 0.668472 | 8_1:-29412054 | Msa1188780:CDS |
| TATCGTCTAATCAATAGTGA+GGG | 0.677759 | 8_1:-29417662 | Msa1188780:CDS |
| CTGTCGATAGAATTATCGGT+AGG | 0.678010 | 8_1:-29417996 | Msa1188780:CDS |
| AAACGATGCACACCCCTACG+TGG | 0.682306 | 8_1:-29418268 | Msa1188780:five_prime_UTR |
| GCATCGTTTGATCCACGTAG+GGG | 0.696074 | 8_1:+29418256 | None:intergenic |
| TTTGCTCTAAATGCAGTGCG+TGG | 0.702286 | 8_1:-29416081 | Msa1188780:CDS |
| CCTTCTACGCAATTCAACAG+CGG | 0.768044 | 8_1:+29417715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTATGAATAGTTT+GGG | - | chr8_1:29412079-29412098 | Msa1188780:CDS | 10.0% |
| !! | TTCATTTAAAAAAAAAACTT+TGG | - | chr8_1:29416417-29416436 | Msa1188780:intron | 10.0% |
| !! | GATTCATTATATTATATATT+AGG | - | chr8_1:29417652-29417671 | Msa1188780:intron | 10.0% |
| !! | TTTAAAAATCTAAACTGATA+TGG | - | chr8_1:29411887-29411906 | Msa1188780:three_prime_UTR | 15.0% |
| !!! | GAAATATTTTATGAATAGTT+TGG | - | chr8_1:29412078-29412097 | Msa1188780:CDS | 15.0% |
| !! | ACTATATCAATCATATAAAT+TGG | - | chr8_1:29412967-29412986 | Msa1188780:intron | 15.0% |
| !!! | AATTTTGATGAACATTTTAA+TGG | + | chr8_1:29413095-29413114 | None:intergenic | 15.0% |
| !! | TAGTTAGATGAAAATAATTT+AGG | - | chr8_1:29413388-29413407 | Msa1188780:intron | 15.0% |
| !! | AGTTAGATGAAAATAATTTA+GGG | - | chr8_1:29413389-29413408 | Msa1188780:intron | 15.0% |
| !!! | TTTAGTTTTACTTATTAACA+AGG | - | chr8_1:29413461-29413480 | Msa1188780:intron | 15.0% |
| !!! | AATATAATTTGCATAATGTA+AGG | + | chr8_1:29413709-29413728 | None:intergenic | 15.0% |
| !! | ATTTACTGTTGTAAATAATT+TGG | - | chr8_1:29414195-29414214 | Msa1188780:intron | 15.0% |
| !! | GAATTATTAAATCAGTTTAT+TGG | + | chr8_1:29415293-29415312 | None:intergenic | 15.0% |
| !!! | TATTTTTACTTACTTGAAAA+TGG | + | chr8_1:29415754-29415773 | None:intergenic | 15.0% |
| !! | AAAAAAATTCTGTTACAAAT+TGG | - | chr8_1:29415793-29415812 | Msa1188780:intron | 15.0% |
| !! | TTTAAAAAAAAAACTTTGGT+TGG | - | chr8_1:29416421-29416440 | Msa1188780:intron | 15.0% |
| !!! | TGAGAATTTTGATAATATAA+GGG | + | chr8_1:29417475-29417494 | None:intergenic | 15.0% |
| !!! | ATGAGAATTTTGATAATATA+AGG | + | chr8_1:29417476-29417495 | None:intergenic | 15.0% |
| !!! | AGTTTATATCGTAATTTTTT+TGG | + | chr8_1:29417799-29417818 | None:intergenic | 15.0% |
| !! | AAAATAATGTGAAAAAACTG+TGG | + | chr8_1:29412612-29412631 | None:intergenic | 20.0% |
| !! | TTCTTTCTATCATAAAAGTA+AGG | + | chr8_1:29412652-29412671 | None:intergenic | 20.0% |
| !!! | AAGAAGACAATTTTTATGTA+TGG | - | chr8_1:29412667-29412686 | Msa1188780:intron | 20.0% |
| !! | AAACATGTTAAAAAAAAAGG+TGG | + | chr8_1:29412698-29412717 | None:intergenic | 20.0% |
| !! | AGGAAACATGTTAAAAAAAA+AGG | + | chr8_1:29412701-29412720 | None:intergenic | 20.0% |
| !! | ATATCAATCATATAAATTGG+AGG | - | chr8_1:29412970-29412989 | Msa1188780:intron | 20.0% |
| !!! | TCCTTTAAAATATCAATAGA+TGG | + | chr8_1:29412996-29413015 | None:intergenic | 20.0% |
| !!! | ATTGATATTTTAAAGGAAGA+CGG | - | chr8_1:29412999-29413018 | Msa1188780:intron | 20.0% |
| !!! | TATTTGATTTCATTCAGAAA+AGG | - | chr8_1:29413351-29413370 | Msa1188780:intron | 20.0% |
| !! | GTTAGATGAAAATAATTTAG+GGG | - | chr8_1:29413390-29413409 | Msa1188780:intron | 20.0% |
| !!! | AAATGTTTTCACAAAGTAAA+CGG | + | chr8_1:29413657-29413676 | None:intergenic | 20.0% |
| !!! | GTAAAACTAACACAAATTTT+AGG | - | chr8_1:29413621-29413640 | Msa1188780:intron | 20.0% |
| !! | AATCATCAAAACATATGTTA+AGG | + | chr8_1:29413737-29413756 | None:intergenic | 20.0% |
| !!! | TCTTCTCAGATTTTTAATTT+GGG | + | chr8_1:29413760-29413779 | None:intergenic | 20.0% |
| !!! | ATCTTCTCAGATTTTTAATT+TGG | + | chr8_1:29413761-29413780 | None:intergenic | 20.0% |
| !!! | TTTATTAAGCTTGAGATTTT+TGG | - | chr8_1:29413910-29413929 | Msa1188780:intron | 20.0% |
| !! | AGTAACAAAGAATAGTTATT+AGG | + | chr8_1:29414313-29414332 | None:intergenic | 20.0% |
| !!! | TGATTCTTAAGGTATTTAAA+AGG | - | chr8_1:29414604-29414623 | Msa1188780:intron | 20.0% |
| !! | TAAACTTTATCACAATTCAA+CGG | + | chr8_1:29415607-29415626 | None:intergenic | 20.0% |
| !! | GATACTTTATTACAAAGAAT+GGG | - | chr8_1:29415815-29415834 | Msa1188780:intron | 20.0% |
| !! | ATACTTTATTACAAAGAATG+GGG | - | chr8_1:29415816-29415835 | Msa1188780:intron | 20.0% |
| !! | TAGTAATAGTAGATTAAAAG+GGG | + | chr8_1:29416031-29416050 | None:intergenic | 20.0% |
| !! | GTAGTAATAGTAGATTAAAA+GGG | + | chr8_1:29416032-29416051 | None:intergenic | 20.0% |
| !! | TGTAGTAATAGTAGATTAAA+AGG | + | chr8_1:29416033-29416052 | None:intergenic | 20.0% |
| !!! | ACATCTGTTTTTTCTAAATT+AGG | - | chr8_1:29416141-29416160 | Msa1188780:CDS | 20.0% |
| !! | AAATATTGCAATGATTAGTA+AGG | + | chr8_1:29416167-29416186 | None:intergenic | 20.0% |
| !! | AAATCAACTGATCTTAAAAT+GGG | + | chr8_1:29416463-29416482 | None:intergenic | 20.0% |
| !! | TAAATCAACTGATCTTAAAA+TGG | + | chr8_1:29416464-29416483 | None:intergenic | 20.0% |
| !! | ATTTATACATAGTATTCAAC+AGG | + | chr8_1:29417284-29417303 | None:intergenic | 20.0% |
| !! | GAATACTATGTATAAATATG+TGG | - | chr8_1:29417287-29417306 | Msa1188780:CDS | 20.0% |
| !!! | ATACTGTCTAATTTTGTAAT+TGG | + | chr8_1:29417413-29417432 | None:intergenic | 20.0% |
| !! | ATTTGTAAGTGATAAATATC+TGG | - | chr8_1:29417548-29417567 | Msa1188780:intron | 20.0% |
| !! | TAATAATACAACAAATCTCA+AGG | - | chr8_1:29417584-29417603 | Msa1188780:intron | 20.0% |
| !! | TGATATGATTTGAATTCTAA+TGG | + | chr8_1:29417631-29417650 | None:intergenic | 20.0% |
| !! | TATATATTAGGAAATTGAGT+TGG | - | chr8_1:29417664-29417683 | Msa1188780:CDS | 20.0% |
| !! | TAAAAAATTTATGCTCACAA+TGG | - | chr8_1:29417753-29417772 | Msa1188780:CDS | 20.0% |
| !!! | TGGCTCATTTTATTTTGATA+TGG | - | chr8_1:29411857-29411876 | Msa1188780:three_prime_UTR | 25.0% |
| !!! | CATTTTATTTTGATATGGAC+CGG | - | chr8_1:29411862-29411881 | Msa1188780:three_prime_UTR | 25.0% |
| !!! | ATTTTATTTTGATATGGACC+GGG | - | chr8_1:29411863-29411882 | Msa1188780:three_prime_UTR | 25.0% |
| !! | CAGTTTAGATTTTTAAATCC+CGG | + | chr8_1:29411884-29411903 | None:intergenic | 25.0% |
| ! | ACGATGCCATAATATTATAT+CGG | - | chr8_1:29411941-29411960 | Msa1188780:three_prime_UTR | 25.0% |
| ! | TGGTTACCGATATAATATTA+TGG | + | chr8_1:29411950-29411969 | None:intergenic | 25.0% |
| ! | AGATGAGTTAGATAGAAATA+TGG | + | chr8_1:29411970-29411989 | None:intergenic | 25.0% |
| ! | ATTATGTGAACAGTAATACA+TGG | - | chr8_1:29412027-29412046 | Msa1188780:CDS | 25.0% |
| ! | TTATGTGAACAGTAATACAT+GGG | - | chr8_1:29412028-29412047 | Msa1188780:CDS | 25.0% |
| !!! | TTTTATGAATAGTTTGGGTT+TGG | - | chr8_1:29412084-29412103 | Msa1188780:CDS | 25.0% |
| ! | ATATTGTTCTAGTATCAGAT+GGG | - | chr8_1:29412227-29412246 | Msa1188780:intron | 25.0% |
| !! | TCCTTTTGTCAACTTTAAAT+AGG | - | chr8_1:29412585-29412604 | Msa1188780:intron | 25.0% |
| !! | ACCTATTTAAAGTTGACAAA+AGG | + | chr8_1:29412589-29412608 | None:intergenic | 25.0% |
| ! | CTAACATATGAATCTTTAAG+AGG | + | chr8_1:29412721-29412740 | None:intergenic | 25.0% |
| ! | CTCTTAAAGATTCATATGTT+AGG | - | chr8_1:29412719-29412738 | Msa1188780:intron | 25.0% |
| ! | AAGCACTATCATTAAAAAGT+TGG | + | chr8_1:29412784-29412803 | None:intergenic | 25.0% |
| !! | CAACATCCAAATAAACTTTT+TGG | + | chr8_1:29412807-29412826 | None:intergenic | 25.0% |
| ! | TTATTTGGATGTTGTTGAAT+TGG | - | chr8_1:29412813-29412832 | Msa1188780:intron | 25.0% |
| ! | TATTTGGATGTTGTTGAATT+GGG | - | chr8_1:29412814-29412833 | Msa1188780:intron | 25.0% |
| !!! | GCCATCTATTGATATTTTAA+AGG | - | chr8_1:29412992-29413011 | Msa1188780:intron | 25.0% |
| !!! | TTTTTTCATGTACTTATCCT+AGG | - | chr8_1:29413128-29413147 | Msa1188780:CDS | 25.0% |
| !! | TTCATGTACTTGTTTCTTAT+TGG | - | chr8_1:29413215-29413234 | Msa1188780:intron | 25.0% |
| ! | TTTCTTATTGGATTGATGTA+TGG | - | chr8_1:29413227-29413246 | Msa1188780:intron | 25.0% |
| ! | AACACTTCGATTAAAAAGTT+TGG | + | chr8_1:29413301-29413320 | None:intergenic | 25.0% |
| ! | ACTAAAACGAATGTTAGTAA+AGG | + | chr8_1:29413447-29413466 | None:intergenic | 25.0% |
| !! | CTTGACATTTTCATTGTTTT+CGG | + | chr8_1:29413526-29413545 | None:intergenic | 25.0% |
| ! | TAAACTGATCATAATCAAGT+TGG | - | chr8_1:29413852-29413871 | Msa1188780:intron | 25.0% |
| ! | AAACTGATCATAATCAAGTT+GGG | - | chr8_1:29413853-29413872 | Msa1188780:intron | 25.0% |
| ! | TTTATATCAAGAGTTTCAGA+TGG | - | chr8_1:29414040-29414059 | Msa1188780:intron | 25.0% |
| !!! | TTTGGTTGTTTTGAAAAGAA+AGG | - | chr8_1:29414213-29414232 | Msa1188780:intron | 25.0% |
| ! | AATTACTGAGAATTAAAGAC+TGG | - | chr8_1:29414249-29414268 | Msa1188780:intron | 25.0% |
| !!! | TTAGGTTATTTTCACTTGTT+GGG | + | chr8_1:29414295-29414314 | None:intergenic | 25.0% |
| !!! | ATTAGGTTATTTTCACTTGT+TGG | + | chr8_1:29414296-29414315 | None:intergenic | 25.0% |
| !! | GTTATGTTGACAATTTTGTT+AGG | - | chr8_1:29415315-29415334 | Msa1188780:intron | 25.0% |
| !!! | ATAATTGATACCTTTTTCGA+AGG | + | chr8_1:29415513-29415532 | None:intergenic | 25.0% |
| !!! | TTCGAAAAAGGTATCAATTA+TGG | - | chr8_1:29415512-29415531 | Msa1188780:intron | 25.0% |
| !! | TTTTGACATACTTTAACACT+TGG | - | chr8_1:29415549-29415568 | Msa1188780:intron | 25.0% |
| ! | TTTGACATACTTTAACACTT+GGG | - | chr8_1:29415550-29415569 | Msa1188780:intron | 25.0% |
| ! | TGATGATAATATAGCATCAT+CGG | + | chr8_1:29415653-29415672 | None:intergenic | 25.0% |
| ! | TGATGCTATATTATCATCAT+TGG | - | chr8_1:29415654-29415673 | Msa1188780:intron | 25.0% |
| ! | TATCATCATTGGTCATTATA+TGG | - | chr8_1:29415665-29415684 | Msa1188780:intron | 25.0% |
| ! | GGATACTTTATTACAAAGAA+TGG | - | chr8_1:29415814-29415833 | Msa1188780:intron | 25.0% |
| ! | CATGAACTTAATATTCTTGT+TGG | + | chr8_1:29416191-29416210 | None:intergenic | 25.0% |
| !! | ATGCTAATTCATGTTTGTTT+TGG | - | chr8_1:29416363-29416382 | Msa1188780:intron | 25.0% |
| ! | AAGTCAACAATTAACATAGA+TGG | + | chr8_1:29416398-29416417 | None:intergenic | 25.0% |
| ! | ATTTAGAAACACTCATCAAT+GGG | - | chr8_1:29416479-29416498 | Msa1188780:intron | 25.0% |
| ! | TTGAAATTTATTGTGTGATC+TGG | - | chr8_1:29416903-29416922 | Msa1188780:intron | 25.0% |
| ! | TATTGCAAATTGCAAAACTT+TGG | + | chr8_1:29416937-29416956 | None:intergenic | 25.0% |
| !!! | CGTAAAATATTTTTTGCTAC+AGG | - | chr8_1:29417015-29417034 | Msa1188780:intron | 25.0% |
| !!! | TGTTATGTTTTGTTTGAGTT+AGG | - | chr8_1:29417195-29417214 | Msa1188780:CDS | 25.0% |
| ! | ACTATGTATAAATATGTGGA+AGG | - | chr8_1:29417291-29417310 | Msa1188780:CDS | 25.0% |
| ! | CTATGTATAAATATGTGGAA+GGG | - | chr8_1:29417292-29417311 | Msa1188780:CDS | 25.0% |
| ! | TATGTATAAATATGTGGAAG+GGG | - | chr8_1:29417293-29417312 | Msa1188780:CDS | 25.0% |
| ! | CATCAAAGATACAAACAAAT+TGG | - | chr8_1:29417493-29417512 | Msa1188780:intron | 25.0% |
| ! | GATTATTGCAAACAGATAAA+TGG | + | chr8_1:29417918-29417937 | None:intergenic | 25.0% |
| !! | GACTTTTTAAATGAGTTTAG+TGG | - | chr8_1:29417974-29417993 | Msa1188780:CDS | 25.0% |
| ! | AAAATGCAGTAATTCAGATT+AGG | + | chr8_1:29418026-29418045 | None:intergenic | 25.0% |
| !!! | ACTGCATTTTCTGTTTTTTT+AGG | - | chr8_1:29418036-29418055 | Msa1188780:five_prime_UTR | 25.0% |
| !!! | CTGCATTTTCTGTTTTTTTA+GGG | - | chr8_1:29418037-29418056 | Msa1188780:five_prime_UTR | 25.0% |
| ! | AAGCAGTTGAAAGAAAAAAT+AGG | - | chr8_1:29418263-29418282 | Msa1188780:five_prime_UTR | 25.0% |
| GATATTGTTCTAGTATCAGA+TGG | - | chr8_1:29412226-29412245 | Msa1188780:intron | 30.0% | |
| AATAATCATATGCCAAAACC+TGG | + | chr8_1:29412335-29412354 | None:intergenic | 30.0% | |
| TATCGTCTAATCAATAGTGA+GGG | - | chr8_1:29412519-29412538 | Msa1188780:intron | 30.0% | |
| AAGTTGGAAGAAAAAATGAG+TGG | + | chr8_1:29412768-29412787 | None:intergenic | 30.0% | |
| GTGCTTCCAAAAAGTTTATT+TGG | - | chr8_1:29412798-29412817 | Msa1188780:intron | 30.0% | |
| AGTTAATGTGTCTGATTCAA+AGG | - | chr8_1:29413022-29413041 | Msa1188780:intron | 30.0% | |
| CAATGTCATTCTAATTACCT+AGG | + | chr8_1:29413148-29413167 | None:intergenic | 30.0% | |
| !! | CTTTTAATGCTTGCTAGTTA+GGG | + | chr8_1:29413581-29413600 | None:intergenic | 30.0% |
| TACTAGTTGACAAAAAGAAG+AGG | + | chr8_1:29413604-29413623 | None:intergenic | 30.0% | |
| ! | AAACTAGCTCTTAGTATTCA+AGG | - | chr8_1:29413674-29413693 | Msa1188780:intron | 30.0% |
| ! | TTAAACATTGTGTGGGTTTT+GGG | - | chr8_1:29413801-29413820 | Msa1188780:intron | 30.0% |
| !! | ATCATAATCAAGTTGGGAAT+TGG | - | chr8_1:29413859-29413878 | Msa1188780:intron | 30.0% |
| !! | TCATAATCAAGTTGGGAATT+GGG | - | chr8_1:29413860-29413879 | Msa1188780:intron | 30.0% |
| ! | CATTTTCCATAATCTGAAAG+AGG | + | chr8_1:29413949-29413968 | None:intergenic | 30.0% |
| CTCTTTCAGATTATGGAAAA+TGG | - | chr8_1:29413947-29413966 | Msa1188780:intron | 30.0% | |
| AATTGTGTACACAATTTCAC+TGG | - | chr8_1:29413970-29413989 | Msa1188780:intron | 30.0% | |
| CTGAAACTCTTGATATAAAC+TGG | + | chr8_1:29414039-29414058 | None:intergenic | 30.0% | |
| ! | ATAGACAATGATAGTGAAGA+AGG | + | chr8_1:29414167-29414186 | None:intergenic | 30.0% |
| !! | TTATTTTCACTTGTTGGGTT+GGG | + | chr8_1:29414290-29414309 | None:intergenic | 30.0% |
| ! | TATTCTTTGTTACTTCCGTT+AGG | - | chr8_1:29414319-29414338 | Msa1188780:intron | 30.0% |
| ! | CGAGTTTAAAACAATCCTAA+CGG | + | chr8_1:29414337-29414356 | None:intergenic | 30.0% |
| !! | TTCTGGACTATTTTAAGTGA+GGG | + | chr8_1:29414373-29414392 | None:intergenic | 30.0% |
| TGACAGTCAAATGATTCTTA+AGG | - | chr8_1:29414593-29414612 | Msa1188780:intron | 30.0% | |
| AAGAAGCTCAGCTATAATAT+GGG | + | chr8_1:29414833-29414852 | None:intergenic | 30.0% | |
| AAAGAAGCTCAGCTATAATA+TGG | + | chr8_1:29414834-29414853 | None:intergenic | 30.0% | |
| ATATTATAGCTGAGCTTCTT+TGG | - | chr8_1:29414833-29414852 | Msa1188780:CDS | 30.0% | |
| TATTATAGCTGAGCTTCTTT+GGG | - | chr8_1:29414834-29414853 | Msa1188780:CDS | 30.0% | |
| AGATTGATTATCACAGCATA+TGG | + | chr8_1:29414904-29414923 | None:intergenic | 30.0% | |
| ! | TAATCAATCTACTGTCCTTT+TGG | - | chr8_1:29414914-29414933 | Msa1188780:intron | 30.0% |
| GTCTAAATATATGTGCCAAA+AGG | + | chr8_1:29414932-29414951 | None:intergenic | 30.0% | |
| CAGTGTTAGTTATCTCTAAT+TGG | + | chr8_1:29414982-29415001 | None:intergenic | 30.0% | |
| TAGAGATAACTAACACTGTT+AGG | - | chr8_1:29414984-29415003 | Msa1188780:intron | 30.0% | |
| TTCAAAAAGGATATTCTTCC+TGG | + | chr8_1:29415405-29415424 | None:intergenic | 30.0% | |
| AGTTGCATCTTCTTTCAAAA+AGG | + | chr8_1:29415418-29415437 | None:intergenic | 30.0% | |
| AGATGCAACTCAATTTATGA+AGG | - | chr8_1:29415428-29415447 | Msa1188780:intron | 30.0% | |
| GATGCAACTCAATTTATGAA+GGG | - | chr8_1:29415429-29415448 | Msa1188780:intron | 30.0% | |
| TCTTATGAGAGATGAATCTT+GGG | - | chr8_1:29415455-29415474 | Msa1188780:intron | 30.0% | |
| CTTCCTAAAGAAGAGTAATT+GGG | - | chr8_1:29415573-29415592 | Msa1188780:intron | 30.0% | |
| AAACCCAATTACTCTTCTTT+AGG | + | chr8_1:29415579-29415598 | None:intergenic | 30.0% | |
| GCAAAAACAAAATCATACAC+AGG | + | chr8_1:29415704-29415723 | None:intergenic | 30.0% | |
| ! | TTCAATGGATTTACAGTTGT+AGG | + | chr8_1:29415960-29415979 | None:intergenic | 30.0% |
| TTAACATGATCCATCATGAT+GGG | + | chr8_1:29416250-29416269 | None:intergenic | 30.0% | |
| TCATGTTAAGATGATGCATT+TGG | - | chr8_1:29416261-29416280 | Msa1188780:intron | 30.0% | |
| CATGTTAAGATGATGCATTT+GGG | - | chr8_1:29416262-29416281 | Msa1188780:intron | 30.0% | |
| GATTTAGAAACACTCATCAA+TGG | - | chr8_1:29416478-29416497 | Msa1188780:intron | 30.0% | |
| TCAAATCATGAGAATATCAG+AGG | - | chr8_1:29416721-29416740 | Msa1188780:intron | 30.0% | |
| TATAGTAGGAAAGGAACTTA+AGG | - | chr8_1:29416775-29416794 | Msa1188780:intron | 30.0% | |
| AGTAAATTCAAGTAAAGCAC+TGG | + | chr8_1:29416851-29416870 | None:intergenic | 30.0% | |
| GTGCTTTACTTGAATTTACT+TGG | - | chr8_1:29416851-29416870 | Msa1188780:intron | 30.0% | |
| ! | CAATTTTCAGCTTTTTATCG+TGG | - | chr8_1:29416979-29416998 | Msa1188780:intron | 30.0% |
| GTACAGAAATTTGAATTCGT+TGG | - | chr8_1:29417060-29417079 | Msa1188780:intron | 30.0% | |
| ! | TTGTTTGAGTTAGGAGAAAA+AGG | - | chr8_1:29417204-29417223 | Msa1188780:CDS | 30.0% |
| ! | TGAAAGACTTTTATAGCACT+AGG | - | chr8_1:29417437-29417456 | Msa1188780:intron | 30.0% |
| ! | GAAAGACTTTTATAGCACTA+GGG | - | chr8_1:29417438-29417457 | Msa1188780:intron | 30.0% |
| AAGATACAAACAAATTGGAC+AGG | - | chr8_1:29417498-29417517 | Msa1188780:intron | 30.0% | |
| TGATAAATATCTGGTCTAAG+TGG | - | chr8_1:29417557-29417576 | Msa1188780:intron | 30.0% | |
| TATTAGCATAATAACCACCT+AGG | - | chr8_1:29417708-29417727 | Msa1188780:CDS | 30.0% | |
| ATGCAGTGAATACTCAAAAT+GGG | + | chr8_1:29417866-29417885 | None:intergenic | 30.0% | |
| CTCATTAAGAATACTACTCA+AGG | + | chr8_1:29417952-29417971 | None:intergenic | 30.0% | |
| TGAAACTCTTAACAGAATGT+TGG | + | chr8_1:29418164-29418183 | None:intergenic | 30.0% | |
| !!! | TGAGTTTTGTTTGTACTTGT+AGG | - | chr8_1:29418184-29418203 | Msa1188780:intron | 30.0% |
| ! | ATGAATAGTTTGGGTTTGGT+AGG | - | chr8_1:29412088-29412107 | Msa1188780:CDS | 35.0% |
| GTATCGTCTAATCAATAGTG+AGG | - | chr8_1:29412518-29412537 | Msa1188780:intron | 35.0% | |
| TGACAAAAGGAATCATGAAG+AGG | + | chr8_1:29412576-29412595 | None:intergenic | 35.0% | |
| ! | GTTGTTGAATTGGGTTTTAC+TGG | - | chr8_1:29412823-29412842 | Msa1188780:intron | 35.0% |
| !! | TGGTTTTGCAACAGATTATC+AGG | - | chr8_1:29412843-29412862 | Msa1188780:intron | 35.0% |
| ! | GGTTTTGCAACAGATTATCA+GGG | - | chr8_1:29412844-29412863 | Msa1188780:intron | 35.0% |
| !! | GGGTTGATAGTTGATGTATT+TGG | - | chr8_1:29412864-29412883 | Msa1188780:intron | 35.0% |
| TACTTGTCCTGAAAGAACAA+AGG | - | chr8_1:29413058-29413077 | Msa1188780:CDS | 35.0% | |
| CAACATACCTTTGTTCTTTC+AGG | + | chr8_1:29413068-29413087 | None:intergenic | 35.0% | |
| !! | GCTTTTAATGCTTGCTAGTT+AGG | + | chr8_1:29413582-29413601 | None:intergenic | 35.0% |
| TTCACCACTTAAACATTGTG+TGG | - | chr8_1:29413793-29413812 | Msa1188780:intron | 35.0% | |
| TCACCACTTAAACATTGTGT+GGG | - | chr8_1:29413794-29413813 | Msa1188780:intron | 35.0% | |
| AAACCCACACAATGTTTAAG+TGG | + | chr8_1:29413800-29413819 | None:intergenic | 35.0% | |
| ! | CTTAAACATTGTGTGGGTTT+TGG | - | chr8_1:29413800-29413819 | Msa1188780:intron | 35.0% |
| ! | TAAACATTGTGTGGGTTTTG+GGG | - | chr8_1:29413802-29413821 | Msa1188780:intron | 35.0% |
| TGTTCTCCTCTTTCAGATTA+TGG | - | chr8_1:29413940-29413959 | Msa1188780:intron | 35.0% | |
| AAGAGTTTCAGATGGTCAAA+AGG | - | chr8_1:29414048-29414067 | Msa1188780:intron | 35.0% | |
| CTTGATCTTTGTTGCTATAG+TGG | - | chr8_1:29414073-29414092 | Msa1188780:intron | 35.0% | |
| ! | AAAGACTGGTTCAAGAAAAG+TGG | - | chr8_1:29414263-29414282 | Msa1188780:intron | 35.0% |
| ! | AAGACTGGTTCAAGAAAAGT+GGG | - | chr8_1:29414264-29414283 | Msa1188780:intron | 35.0% |
| !! | GTTATTTTCACTTGTTGGGT+TGG | + | chr8_1:29414291-29414310 | None:intergenic | 35.0% |
| !! | CTTCTGGACTATTTTAAGTG+AGG | + | chr8_1:29414374-29414393 | None:intergenic | 35.0% |
| ATGAATCTCAAAGCTACTTC+TGG | + | chr8_1:29414390-29414409 | None:intergenic | 35.0% | |
| TGATTATCACAGCATATGGA+TGG | + | chr8_1:29414900-29414919 | None:intergenic | 35.0% | |
| TACACCTGCTATAGAAAATC+AGG | - | chr8_1:29415040-29415059 | Msa1188780:intron | 35.0% | |
| TTGCCCTAGAATCTAATGAA+GGG | - | chr8_1:29415130-29415149 | Msa1188780:intron | 35.0% | |
| TTGCCCTTCATTAGATTCTA+GGG | + | chr8_1:29415136-29415155 | None:intergenic | 35.0% | |
| ATTGCCCTTCATTAGATTCT+AGG | + | chr8_1:29415137-29415156 | None:intergenic | 35.0% | |
| GTACTTAACAACATTGATCC+AGG | - | chr8_1:29415384-29415403 | Msa1188780:intron | 35.0% | |
| CTCTTATGAGAGATGAATCT+TGG | - | chr8_1:29415454-29415473 | Msa1188780:intron | 35.0% | |
| GCTTCCTAAAGAAGAGTAAT+TGG | - | chr8_1:29415572-29415591 | Msa1188780:intron | 35.0% | |
| ! | TTTTCCGTCCATATTTGCAA+GGG | + | chr8_1:29415846-29415865 | None:intergenic | 35.0% |
| ! | ATTTTCCGTCCATATTTGCA+AGG | + | chr8_1:29415847-29415866 | None:intergenic | 35.0% |
| ! | TTTGACTTAGTGGTTTCTTG+GGG | + | chr8_1:29415871-29415890 | None:intergenic | 35.0% |
| ! | GTTTGACTTAGTGGTTTCTT+GGG | + | chr8_1:29415872-29415891 | None:intergenic | 35.0% |
| ! | TGTTTGACTTAGTGGTTTCT+TGG | + | chr8_1:29415873-29415892 | None:intergenic | 35.0% |
| GAAACCACTAAGTCAAACAT+TGG | - | chr8_1:29415874-29415893 | Msa1188780:intron | 35.0% | |
| TAAGTCAAACATTGGCCATT+GGG | - | chr8_1:29415882-29415901 | Msa1188780:intron | 35.0% | |
| AAAACTAAGAGAAAGGACTG+TGG | + | chr8_1:29415909-29415928 | None:intergenic | 35.0% | |
| ACAGTGCAAAACTAAGAGAA+AGG | + | chr8_1:29415916-29415935 | None:intergenic | 35.0% | |
| TTTGCACTGTCTTTAGTAGT+CGG | - | chr8_1:29415926-29415945 | Msa1188780:intron | 35.0% | |
| GGATTTACAGTTGTAGGAAA+TGG | + | chr8_1:29415954-29415973 | None:intergenic | 35.0% | |
| TGCAACGCAAATGGTTTAAA+AGG | + | chr8_1:29416062-29416081 | None:intergenic | 35.0% | |
| CTTAACATGATCCATCATGA+TGG | + | chr8_1:29416251-29416270 | None:intergenic | 35.0% | |
| ! | GTTTGACACATTCCCTTTTT+AGG | - | chr8_1:29416284-29416303 | Msa1188780:intron | 35.0% |
| ACAAAGGGAGTTCCTAAAAA+GGG | + | chr8_1:29416299-29416318 | None:intergenic | 35.0% | |
| AACAAAGGGAGTTCCTAAAA+AGG | + | chr8_1:29416300-29416319 | None:intergenic | 35.0% | |
| TCTTTGTCTTCTGTATGCAT+TGG | - | chr8_1:29416514-29416533 | Msa1188780:intron | 35.0% | |
| TGGACATATTCTTACTGCAT+CGG | - | chr8_1:29416534-29416553 | Msa1188780:intron | 35.0% | |
| ! | CAAACCTAATCTAGAACAAG+TGG | + | chr8_1:29416591-29416610 | None:intergenic | 35.0% |
| ! | CACTTGTTCTAGATTAGGTT+TGG | - | chr8_1:29416589-29416608 | Msa1188780:intron | 35.0% |
| ! | AGATTAGGTTTGGTCATTTG+TGG | - | chr8_1:29416599-29416618 | Msa1188780:intron | 35.0% |
| TCATTAGAGAATCTTCTCGT+TGG | - | chr8_1:29416663-29416682 | Msa1188780:intron | 35.0% | |
| ACATCTTTGACCTAAATAGC+TGG | - | chr8_1:29416747-29416766 | Msa1188780:intron | 35.0% | |
| AGTTCCTTTCCTACTATATG+AGG | + | chr8_1:29416773-29416792 | None:intergenic | 35.0% | |
| TTACATTAGTACATAGTCCG+AGG | + | chr8_1:29416828-29416847 | None:intergenic | 35.0% | |
| ! | ACCTCTTTTTGTAAGTTGCA+TGG | + | chr8_1:29417086-29417105 | None:intergenic | 35.0% |
| ATGCAACTTACAAAAAGAGG+TGG | - | chr8_1:29417085-29417104 | Msa1188780:intron | 35.0% | |
| CATATTCATGCGTATCTTAC+AGG | - | chr8_1:29417153-29417172 | Msa1188780:CDS | 35.0% | |
| CATAACAATCGTCTATATGC+TGG | + | chr8_1:29417182-29417201 | None:intergenic | 35.0% | |
| TTGAGTTAGGAGAAAAAGGA+AGG | - | chr8_1:29417208-29417227 | Msa1188780:CDS | 35.0% | |
| TGAGTTAGGAGAAAAAGGAA+GGG | - | chr8_1:29417209-29417228 | Msa1188780:CDS | 35.0% | |
| ACAACAAATCTCAAGGTAGT+AGG | - | chr8_1:29417591-29417610 | Msa1188780:intron | 35.0% | |
| GATGCAGTGAATACTCAAAA+TGG | + | chr8_1:29417867-29417886 | None:intergenic | 35.0% | |
| ! | TTTGCAATAATCAAGTGCTG+TGG | - | chr8_1:29417926-29417945 | Msa1188780:CDS | 35.0% |
| ! | CTCTTAACAGAATGTTGGTT+AGG | + | chr8_1:29418159-29418178 | None:intergenic | 35.0% |
| AATAAAATGAGCCAGTCCGA+CGG | + | chr8_1:29411851-29411870 | None:intergenic | 40.0% | |
| TGCAAAGGTTGTGCTAAAGA+AGG | - | chr8_1:29412114-29412133 | Msa1188780:CDS | 40.0% | |
| GCAAAGGTTGTGCTAAAGAA+GGG | - | chr8_1:29412115-29412134 | Msa1188780:CDS | 40.0% | |
| CAAAGGTTGTGCTAAAGAAG+GGG | - | chr8_1:29412116-29412135 | Msa1188780:CDS | 40.0% | |
| ! | AAGACGCAACTCTTTAAGGA+TGG | - | chr8_1:29412139-29412158 | Msa1188780:intron | 40.0% |
| GGAGCTGTCGATAGAATTAT+CGG | - | chr8_1:29412181-29412200 | Msa1188780:intron | 40.0% | |
| CTGTCGATAGAATTATCGGT+AGG | - | chr8_1:29412185-29412204 | Msa1188780:intron | 40.0% | |
| AGAACAATATCGCCTGTCTT+AGG | + | chr8_1:29412217-29412236 | None:intergenic | 40.0% | |
| CGGTTTCTATGTTCTCTGTT+CGG | - | chr8_1:29412284-29412303 | Msa1188780:intron | 40.0% | |
| ! | TTCAGCTTAGTCTGTTGACT+TGG | - | chr8_1:29412372-29412391 | Msa1188780:intron | 40.0% |
| TTCAGCATGTGCATTGAACA+TGG | - | chr8_1:29412416-29412435 | Msa1188780:intron | 40.0% | |
| TGTTGAATTGCGTAGAAGGT+TGG | - | chr8_1:29412470-29412489 | Msa1188780:intron | 40.0% | |
| GTTGAATTGCGTAGAAGGTT+GGG | - | chr8_1:29412471-29412490 | Msa1188780:intron | 40.0% | |
| TTAGACGATACGCATTCGTA+TGG | + | chr8_1:29412509-29412528 | None:intergenic | 40.0% | |
| TAATCAATAGTGAGGGTGAC+AGG | - | chr8_1:29412526-29412545 | Msa1188780:intron | 40.0% | |
| CAGAGATAGAGACATGCATA+AGG | - | chr8_1:29412937-29412956 | Msa1188780:intron | 40.0% | |
| ATAATAAGACCAGCGTCTAG+CGG | + | chr8_1:29413191-29413210 | None:intergenic | 40.0% | |
| TTGGATTGATGTATGGCAGA+AGG | - | chr8_1:29413234-29413253 | Msa1188780:intron | 40.0% | |
| AGTTAGGGATGATGCATTTC+AGG | + | chr8_1:29413566-29413585 | None:intergenic | 40.0% | |
| GATCTTTGTTGCTATAGTGG+TGG | - | chr8_1:29414076-29414095 | Msa1188780:intron | 40.0% | |
| TTGAGATTCATCCTCATTCC+AGG | - | chr8_1:29414399-29414418 | Msa1188780:intron | 40.0% | |
| TAGCAACTTTGGTGAGTTTG+AGG | + | chr8_1:29414473-29414492 | None:intergenic | 40.0% | |
| CATAAGGTCAGTAGCAACTT+TGG | + | chr8_1:29414484-29414503 | None:intergenic | 40.0% | |
| ACCACATATCTGAGCATGAA+GGG | + | chr8_1:29414513-29414532 | None:intergenic | 40.0% | |
| AACCACATATCTGAGCATGA+AGG | + | chr8_1:29414514-29414533 | None:intergenic | 40.0% | |
| TTCATGCTCAGATATGTGGT+TGG | - | chr8_1:29414513-29414532 | Msa1188780:intron | 40.0% | |
| CTAATCCCTCGGAATCTTAT+TGG | - | chr8_1:29414569-29414588 | Msa1188780:intron | 40.0% | |
| GTCATCCAATAAGATTCCGA+GGG | + | chr8_1:29414577-29414596 | None:intergenic | 40.0% | |
| TGTCATCCAATAAGATTCCG+AGG | + | chr8_1:29414578-29414597 | None:intergenic | 40.0% | |
| ACAAAAGGCCTTGAGATAAG+GGG | + | chr8_1:29414677-29414696 | None:intergenic | 40.0% | |
| CACAAAAGGCCTTGAGATAA+GGG | + | chr8_1:29414678-29414697 | None:intergenic | 40.0% | |
| TCACAAAAGGCCTTGAGATA+AGG | + | chr8_1:29414679-29414698 | None:intergenic | 40.0% | |
| AAAAGCAACCAGTTGTAGCT+TGG | - | chr8_1:29414776-29414795 | Msa1188780:CDS | 40.0% | |
| TATCACAGCATATGGATGGA+GGG | + | chr8_1:29414896-29414915 | None:intergenic | 40.0% | |
| TTATCACAGCATATGGATGG+AGG | + | chr8_1:29414897-29414916 | None:intergenic | 40.0% | |
| GTTATCTCTAATTGGCGTGT+TGG | + | chr8_1:29414974-29414993 | None:intergenic | 40.0% | |
| ! | GAGACCTGATTTTCTATAGC+AGG | + | chr8_1:29415047-29415066 | None:intergenic | 40.0% |
| !! | TCATTAGATTCTAGGGCAAC+TGG | + | chr8_1:29415129-29415148 | None:intergenic | 40.0% |
| GTTGCCCTAGAATCTAATGA+AGG | - | chr8_1:29415129-29415148 | Msa1188780:intron | 40.0% | |
| CTAACAGGGAGTCTGTAAAA+AGG | + | chr8_1:29415193-29415212 | None:intergenic | 40.0% | |
| TTTGTTCCAGGCTTCTAACA+GGG | + | chr8_1:29415207-29415226 | None:intergenic | 40.0% | |
| ATTTGTTCCAGGCTTCTAAC+AGG | + | chr8_1:29415208-29415227 | None:intergenic | 40.0% | |
| AGCCTGGAACAAATGTATAG+AGG | - | chr8_1:29415214-29415233 | Msa1188780:intron | 40.0% | |
| GCCTGGAACAAATGTATAGA+GGG | - | chr8_1:29415215-29415234 | Msa1188780:intron | 40.0% | |
| TCCCTCTATACATTTGTTCC+AGG | + | chr8_1:29415219-29415238 | None:intergenic | 40.0% | |
| CATCATTGATCCTCCTAAAC+TGG | - | chr8_1:29415485-29415504 | Msa1188780:intron | 40.0% | |
| !!! | TTTTTCGAAGGTGCCAGTTT+AGG | + | chr8_1:29415501-29415520 | None:intergenic | 40.0% |
| TAAACTGGCACCTTCGAAAA+AGG | - | chr8_1:29415500-29415519 | Msa1188780:intron | 40.0% | |
| TTGACTTAGTGGTTTCTTGG+GGG | + | chr8_1:29415870-29415889 | None:intergenic | 40.0% | |
| ! | ATGGCCAATGTTTGACTTAG+TGG | + | chr8_1:29415881-29415900 | None:intergenic | 40.0% |
| CTAAGTCAAACATTGGCCAT+TGG | - | chr8_1:29415881-29415900 | Msa1188780:intron | 40.0% | |
| CAAAGAGAGCAATGCTTCAA+TGG | + | chr8_1:29415975-29415994 | None:intergenic | 40.0% | |
| GCTACTGTTGTGACATCAAT+GGG | + | chr8_1:29415998-29416017 | None:intergenic | 40.0% | |
| TGCTACTGTTGTGACATCAA+TGG | + | chr8_1:29415999-29416018 | None:intergenic | 40.0% | |
| AGTAACTGTTAGAGTTCGAG+TGG | + | chr8_1:29416088-29416107 | None:intergenic | 40.0% | |
| CTCGAACTCTAACAGTTACT+AGG | - | chr8_1:29416088-29416107 | Msa1188780:CDS | 40.0% | |
| CCTGCAAAGGTGAAAACAAA+GGG | + | chr8_1:29416314-29416333 | None:intergenic | 40.0% | |
| TCCTGCAAAGGTGAAAACAA+AGG | + | chr8_1:29416315-29416334 | None:intergenic | 40.0% | |
| !! | TTTGTTTTCACCTTTGCAGG+AGG | - | chr8_1:29416314-29416333 | Msa1188780:intron | 40.0% |
| GGACACATTGAAGTTGTGTA+TGG | - | chr8_1:29416338-29416357 | Msa1188780:intron | 40.0% | |
| ! | TGAGCCACTTGTTCTAGATT+AGG | - | chr8_1:29416584-29416603 | Msa1188780:intron | 40.0% |
| GACTTATAGCAACACAACAC+TGG | - | chr8_1:29416626-29416645 | Msa1188780:intron | 40.0% | |
| TATAGCAACACAACACTGGT+AGG | - | chr8_1:29416630-29416649 | Msa1188780:intron | 40.0% | |
| ATAGCAACACAACACTGGTA+GGG | - | chr8_1:29416631-29416650 | Msa1188780:intron | 40.0% | |
| ! | TTCTCGTTGGTAGAGGTAAA+GGG | - | chr8_1:29416676-29416695 | Msa1188780:intron | 40.0% |
| CTATATGAGGCCAGCTATTT+AGG | + | chr8_1:29416760-29416779 | None:intergenic | 40.0% | |
| ! | AATAGCTGGCCTCATATAGT+AGG | - | chr8_1:29416761-29416780 | Msa1188780:intron | 40.0% |
| !! | GGTTGATATTGATTCTGCCT+CGG | - | chr8_1:29416808-29416827 | Msa1188780:intron | 40.0% |
| ! | TTTTTGCTACAGGCTCTACA+CGG | - | chr8_1:29417025-29417044 | Msa1188780:intron | 40.0% |
| GCCATGCAACTTACAAAAAG+AGG | - | chr8_1:29417082-29417101 | Msa1188780:intron | 40.0% | |
| !! | ACGCATGAATATGCCACTTT+GGG | + | chr8_1:29417146-29417165 | None:intergenic | 40.0% |
| ! | TACGCATGAATATGCCACTT+TGG | + | chr8_1:29417147-29417166 | None:intergenic | 40.0% |
| TATGTGGAAGGGGAATGAAA+TGG | - | chr8_1:29417303-29417322 | Msa1188780:CDS | 40.0% | |
| ATGTGGAAGGGGAATGAAAT+GGG | - | chr8_1:29417304-29417323 | Msa1188780:CDS | 40.0% | |
| TTGGACAGGTATAAGAATGC+TGG | - | chr8_1:29417512-29417531 | Msa1188780:intron | 40.0% | |
| ! | TCTCAAGGTAGTAGGTTGAA+AGG | - | chr8_1:29417599-29417618 | Msa1188780:intron | 40.0% |
| ATAACCACCTAGGAAATGTG+AGG | - | chr8_1:29417718-29417737 | Msa1188780:CDS | 40.0% | |
| TAACCACCTAGGAAATGTGA+GGG | - | chr8_1:29417719-29417738 | Msa1188780:CDS | 40.0% | |
| ATTCACTGCATCAGTTAGTG+TGG | - | chr8_1:29417875-29417894 | Msa1188780:CDS | 40.0% | |
| ! | TAGTGTGGCATGGAAGTTTT+TGG | - | chr8_1:29417890-29417909 | Msa1188780:CDS | 40.0% |
| !!! | TTTTTAGGGTGCAGCATCTA+TGG | - | chr8_1:29418051-29418070 | Msa1188780:five_prime_UTR | 40.0% |
| !! | ATCACTGTTCTAAGAGATGC+TGG | - | chr8_1:29418085-29418104 | Msa1188780:five_prime_UTR | 40.0% |
| TCCTATTGATCCATCATACC+CGG | - | chr8_1:29418123-29418142 | Msa1188780:intron | 40.0% | |
| CATTCATGAAGCCAATGTCA+CGG | - | chr8_1:29418332-29418351 | Msa1188780:five_prime_UTR | 40.0% | |
| ! | CTTTAAGGATGGCAACCCAA+TGG | - | chr8_1:29412150-29412169 | Msa1188780:intron | 45.0% |
| CAGCTCCACTGTATACCATT+GGG | + | chr8_1:29412168-29412187 | None:intergenic | 45.0% | |
| ACAGCTCCACTGTATACCAT+TGG | + | chr8_1:29412169-29412188 | None:intergenic | 45.0% | |
| ACAATATCGCCTGTCTTAGG+AGG | + | chr8_1:29412214-29412233 | None:intergenic | 45.0% | |
| GATGGGACTGAGAAACCAAT+AGG | - | chr8_1:29412244-29412263 | Msa1188780:intron | 45.0% | |
| GACTGAGAAACCAATAGGCT+GGG | - | chr8_1:29412249-29412268 | Msa1188780:intron | 45.0% | |
| ACTGAGAAACCAATAGGCTG+GGG | - | chr8_1:29412250-29412269 | Msa1188780:intron | 45.0% | |
| ! | AAGACGAAGCTACCAGGTTT+TGG | - | chr8_1:29412320-29412339 | Msa1188780:intron | 45.0% |
| CCTTCTACGCAATTCAACAG+CGG | + | chr8_1:29412469-29412488 | None:intergenic | 45.0% | |
| TACGCATTCGTATGGACAGA+AGG | + | chr8_1:29412501-29412520 | None:intergenic | 45.0% | |
| GTGTACACAATTTCACTGGC+AGG | - | chr8_1:29413974-29413993 | Msa1188780:intron | 45.0% | |
| ! | TTTGCTCTAAATGCAGTGCG+TGG | - | chr8_1:29414100-29414119 | Msa1188780:intron | 45.0% |
| ATTCCAGGACCAACATTGGT+TGG | - | chr8_1:29414414-29414433 | Msa1188780:intron | 45.0% | |
| GGGTTAGATCCAACCAATGT+TGG | + | chr8_1:29414426-29414445 | None:intergenic | 45.0% | |
| ATGGCATAGGAGTGGATACT+GGG | + | chr8_1:29414446-29414465 | None:intergenic | 45.0% | |
| GCATGAAGGGATCTTGCATA+AGG | + | chr8_1:29414500-29414519 | None:intergenic | 45.0% | |
| TCCCTTCATGCTCAGATATG+TGG | - | chr8_1:29414509-29414528 | Msa1188780:intron | 45.0% | |
| TATGCCACTCTGCCAGTTTA+TGG | - | chr8_1:29414546-29414565 | Msa1188780:intron | 45.0% | |
| TTAGCCATAAACTGGCAGAG+TGG | + | chr8_1:29414553-29414572 | None:intergenic | 45.0% | |
| CCAGTTTATGGCTAATCCCT+CGG | - | chr8_1:29414558-29414577 | Msa1188780:intron | 45.0% | |
| !! | TTAAAAGGCACCAGTCAGCT+TGG | - | chr8_1:29414619-29414638 | Msa1188780:intron | 45.0% |
| TCACAAACCCCCTTATCTCA+AGG | - | chr8_1:29414666-29414685 | Msa1188780:intron | 45.0% | |
| CAAAAGGCCTTGAGATAAGG+GGG | + | chr8_1:29414676-29414695 | None:intergenic | 45.0% | |
| ATCGAGACCTGCATCACAAA+AGG | + | chr8_1:29414692-29414711 | None:intergenic | 45.0% | |
| ATGATAGACGCTCTACCTCT+GGG | - | chr8_1:29414710-29414729 | Msa1188780:CDS | 45.0% | |
| TTGCTCCCAATGTCATCTCT+TGG | - | chr8_1:29414746-29414765 | Msa1188780:CDS | 45.0% | |
| GACCACCAAGAGATGACATT+GGG | + | chr8_1:29414754-29414773 | None:intergenic | 45.0% | |
| TGACCACCAAGAGATGACAT+TGG | + | chr8_1:29414755-29414774 | None:intergenic | 45.0% | |
| GGTGTATGCAAGAATGAGAG+TGG | + | chr8_1:29415026-29415045 | None:intergenic | 45.0% | |
| TCTTTAGCAAGCTCAAGAGC+TGG | + | chr8_1:29415357-29415376 | None:intergenic | 45.0% | |
| ! | GAGTGGTAATGCAACGCAAA+TGG | + | chr8_1:29416071-29416090 | None:intergenic | 45.0% |
| ATGTGTCAATGCGTGACATG+TGG | + | chr8_1:29416125-29416144 | None:intergenic | 45.0% | |
| ACAACATGCTCCCATCATGA+TGG | - | chr8_1:29416237-29416256 | Msa1188780:intron | 45.0% | |
| !!! | CCCTTTGTTTTCACCTTTGC+AGG | - | chr8_1:29416311-29416330 | Msa1188780:intron | 45.0% |
| ! | CTTACTGCATCGGTAACAAG+TGG | - | chr8_1:29416544-29416563 | Msa1188780:intron | 45.0% |
| ! | GAGAATCTTCTCGTTGGTAG+AGG | - | chr8_1:29416669-29416688 | Msa1188780:intron | 45.0% |
| ! | CTTCTCGTTGGTAGAGGTAA+AGG | - | chr8_1:29416675-29416694 | Msa1188780:intron | 45.0% |
| CTGGCCTCATATAGTAGGAA+AGG | - | chr8_1:29416766-29416785 | Msa1188780:intron | 45.0% | |
| !! | GGAACTTAAGGTGTCGTTGT+TGG | - | chr8_1:29416787-29416806 | Msa1188780:intron | 45.0% |
| ! | TTGATGACCTGTTCCTGTTC+TGG | - | chr8_1:29417112-29417131 | Msa1188780:intron | 45.0% |
| TAGGAGAAAAAGGAAGGGTG+AGG | - | chr8_1:29417214-29417233 | Msa1188780:CDS | 45.0% | |
| AGGAGAAAAAGGAAGGGTGA+GGG | - | chr8_1:29417215-29417234 | Msa1188780:CDS | 45.0% | |
| ACAGAGGGGAAAGAAAAGAG+AGG | - | chr8_1:29417243-29417262 | Msa1188780:CDS | 45.0% | |
| ! | CAAGGTAGTAGGTTGAAAGG+TGG | - | chr8_1:29417602-29417621 | Msa1188780:intron | 45.0% |
| TCACATCCCTCACATTTCCT+AGG | + | chr8_1:29417728-29417747 | None:intergenic | 45.0% | |
| !! | TCCGGGTATGATGGATCAAT+AGG | + | chr8_1:29418127-29418146 | None:intergenic | 45.0% |
| ATTGATCCATCATACCCGGA+AGG | - | chr8_1:29418127-29418146 | Msa1188780:intron | 45.0% | |
| GCATCGTTTGATCCACGTAG+GGG | + | chr8_1:29411928-29411947 | None:intergenic | 50.0% | |
| GGCATCGTTTGATCCACGTA+GGG | + | chr8_1:29411929-29411948 | None:intergenic | 50.0% | |
| TGGCATCGTTTGATCCACGT+AGG | + | chr8_1:29411930-29411949 | None:intergenic | 50.0% | |
| ! | GGGTTTGGTAGGTGTTGCAA+AGG | - | chr8_1:29412099-29412118 | Msa1188780:CDS | 50.0% |
| GGGGAAGACGCAACTCTTTA+AGG | - | chr8_1:29412135-29412154 | Msa1188780:intron | 50.0% | |
| GGCAACCCAATGGTATACAG+TGG | - | chr8_1:29412160-29412179 | Msa1188780:intron | 50.0% | |
| ATATCGCCTGTCTTAGGAGG+CGG | + | chr8_1:29412211-29412230 | None:intergenic | 50.0% | |
| GGACTGAGAAACCAATAGGC+TGG | - | chr8_1:29412248-29412267 | Msa1188780:intron | 50.0% | |
| TTGTACAAGCCCCAGCCTAT+TGG | + | chr8_1:29412262-29412281 | None:intergenic | 50.0% | |
| AGCTTGAAGACGAAGCTACC+AGG | - | chr8_1:29412314-29412333 | Msa1188780:intron | 50.0% | |
| CCGCTGTTGAATTGCGTAGA+AGG | - | chr8_1:29412466-29412485 | Msa1188780:intron | 50.0% | |
| GGTGACAGGTGAGAGATGAA+GGG | - | chr8_1:29412540-29412559 | Msa1188780:intron | 50.0% | |
| TAGTAGCGTCATCTGCTGCT+TGG | - | chr8_1:29412898-29412917 | Msa1188780:intron | 50.0% | |
| ! | AGTAGCGTCATCTGCTGCTT+GGG | - | chr8_1:29412899-29412918 | Msa1188780:intron | 50.0% |
| !!! | ACATTGTGTGGGTTTTGGGG+TGG | - | chr8_1:29413805-29413824 | Msa1188780:intron | 50.0% |
| !!! | CATTGTGTGGGTTTTGGGGT+GGG | - | chr8_1:29413806-29413825 | Msa1188780:intron | 50.0% |
| !!! | ATTGTGTGGGTTTTGGGGTG+GGG | - | chr8_1:29413807-29413826 | Msa1188780:intron | 50.0% |
| CCAATGTTGGTCCTGGAATG+AGG | + | chr8_1:29414413-29414432 | None:intergenic | 50.0% | |
| CCTCATTCCAGGACCAACAT+TGG | - | chr8_1:29414410-29414429 | Msa1188780:intron | 50.0% | |
| GATCCAACCAATGTTGGTCC+TGG | + | chr8_1:29414420-29414439 | None:intergenic | 50.0% | |
| GATGGCATAGGAGTGGATAC+TGG | + | chr8_1:29414447-29414466 | None:intergenic | 50.0% | |
| GTATCCACTCCTATGCCATC+TGG | - | chr8_1:29414447-29414466 | Msa1188780:intron | 50.0% | |
| ! | AGTTTGAGGCCAGATGGCAT+AGG | + | chr8_1:29414459-29414478 | None:intergenic | 50.0% |
| ! | TTGGTGAGTTTGAGGCCAGA+TGG | + | chr8_1:29414465-29414484 | None:intergenic | 50.0% |
| !! | CCGAGGGATTAGCCATAAAC+TGG | + | chr8_1:29414561-29414580 | None:intergenic | 50.0% |
| AAAACGAAGGCCAAGCTGAC+TGG | + | chr8_1:29414632-29414651 | None:intergenic | 50.0% | |
| TGGAGGTGGGGTAAAAACGA+AGG | + | chr8_1:29414645-29414664 | None:intergenic | 50.0% | |
| ATAAGGGGGTTTGTGAGTGG+AGG | + | chr8_1:29414662-29414681 | None:intergenic | 50.0% | |
| GAGATAAGGGGGTTTGTGAG+TGG | + | chr8_1:29414665-29414684 | None:intergenic | 50.0% | |
| ! | CTCAAGGCCTTTTGTGATGC+AGG | - | chr8_1:29414682-29414701 | Msa1188780:CDS | 50.0% |
| GATGATAGACGCTCTACCTC+TGG | - | chr8_1:29414709-29414728 | Msa1188780:CDS | 50.0% | |
| TGATAGACGCTCTACCTCTG+GGG | - | chr8_1:29414711-29414730 | Msa1188780:CDS | 50.0% | |
| AAAGTAGATAGCAGCCCCAG+AGG | + | chr8_1:29414728-29414747 | None:intergenic | 50.0% | |
| CTCCCAATGTCATCTCTTGG+TGG | - | chr8_1:29414749-29414768 | Msa1188780:CDS | 50.0% | |
| AGTTGTAGCTTGGTCCAGCA+CGG | - | chr8_1:29414786-29414805 | Msa1188780:CDS | 50.0% | |
| ! | CATATGGATGGAGGGTGTGT+AGG | + | chr8_1:29414888-29414907 | None:intergenic | 50.0% |
| !! | TTCGAAGGTGCCAGTTTAGG+AGG | + | chr8_1:29415498-29415517 | None:intergenic | 50.0% |
| AGAAAGGACTGTGGTCCCAA+TGG | + | chr8_1:29415900-29415919 | None:intergenic | 50.0% | |
| ! | GTTTTCACCTTTGCAGGAGG+TGG | - | chr8_1:29416317-29416336 | Msa1188780:intron | 50.0% |
| AATGTGTCCACCTCCTGCAA+AGG | + | chr8_1:29416327-29416346 | None:intergenic | 50.0% | |
| CAACACAACACTGGTAGGGA+GGG | - | chr8_1:29416635-29416654 | Msa1188780:intron | 50.0% | |
| ! | TCGTTGGTAGAGGTAAAGGG+TGG | - | chr8_1:29416679-29416698 | Msa1188780:intron | 50.0% |
| GGAGAAAAAGGAAGGGTGAG+GGG | - | chr8_1:29417216-29417235 | Msa1188780:CDS | 50.0% | |
| GAGAAAAAGGAAGGGTGAGG+GGG | - | chr8_1:29417217-29417236 | Msa1188780:CDS | 50.0% | |
| CATCCCTCACATTTCCTAGG+TGG | + | chr8_1:29417725-29417744 | None:intergenic | 50.0% | |
| CTGCATCAGTTAGTGTGGCA+TGG | - | chr8_1:29417880-29417899 | Msa1188780:CDS | 50.0% | |
| TTGGTTAGGTATGCGCCTTC+CGG | + | chr8_1:29418145-29418164 | None:intergenic | 50.0% | |
| AAACGATGCACACCCCTACG+TGG | - | chr8_1:29411913-29411932 | Msa1188780:three_prime_UTR | 55.0% | |
| AGGCTGGGGCTTGTACAACT+CGG | - | chr8_1:29412264-29412283 | Msa1188780:intron | 55.0% | |
| GGGTGACAGGTGAGAGATGA+AGG | - | chr8_1:29412539-29412558 | Msa1188780:intron | 55.0% | |
| ! | AGATTAGTGCCGCTAGACGC+TGG | - | chr8_1:29413179-29413198 | Msa1188780:intron | 55.0% |
| TCACTGGCAGGACAGAAGAC+AGG | - | chr8_1:29413986-29414005 | Msa1188780:intron | 55.0% | |
| CACTGGCAGGACAGAAGACA+GGG | - | chr8_1:29413987-29414006 | Msa1188780:intron | 55.0% | |
| ! | GCTCTAAATGCAGTGCGTGG+CGG | - | chr8_1:29414103-29414122 | Msa1188780:intron | 55.0% |
| ! | GGCGGTGCTCTAAATGTCAC+TGG | - | chr8_1:29414121-29414140 | Msa1188780:intron | 55.0% |
| TGGCAGAGTGGCATACTGCA+AGG | + | chr8_1:29414541-29414560 | None:intergenic | 55.0% | |
| GTGCTGGACCAAGCTACAAC+TGG | + | chr8_1:29414787-29414806 | None:intergenic | 55.0% | |
| ACAGTACTCAGCTTCCGTGC+TGG | + | chr8_1:29414803-29414822 | None:intergenic | 55.0% | |
| CAGACTCCCTGTTAGAAGCC+TGG | - | chr8_1:29415198-29415217 | Msa1188780:intron | 55.0% | |
| GCAACACAACACTGGTAGGG+AGG | - | chr8_1:29416634-29416653 | Msa1188780:intron | 55.0% | |
| GTAGAGGTAAAGGGTGGCTG+AGG | - | chr8_1:29416685-29416704 | Msa1188780:intron | 55.0% | |
| CACAGCTCCAGAACAGGAAC+AGG | + | chr8_1:29417122-29417141 | None:intergenic | 55.0% | |
| TTGGGTCACAGCTCCAGAAC+AGG | + | chr8_1:29417128-29417147 | None:intergenic | 55.0% | |
| ! | TCTGGAGCTGTGACCCAAAG+TGG | - | chr8_1:29417130-29417149 | Msa1188780:CDS | 55.0% |
| TATGCGCCTTCCGGGTATGA+TGG | + | chr8_1:29418136-29418155 | None:intergenic | 55.0% | |
| TGGTTAGGTATGCGCCTTCC+GGG | + | chr8_1:29418144-29418163 | None:intergenic | 55.0% | |
| !!! | TGTGGGTTTTGGGGTGGGGT+GGG | - | chr8_1:29413811-29413830 | Msa1188780:intron | 60.0% |
| !!! | TTTTGGGGTGGGGTGGGGTA+GGG | - | chr8_1:29413817-29413836 | Msa1188780:intron | 60.0% |
| GAGGCCAGATGGCATAGGAG+TGG | + | chr8_1:29414454-29414473 | None:intergenic | 60.0% | |
| GGGGTTTGTGAGTGGAGGTG+GGG | + | chr8_1:29414657-29414676 | None:intergenic | 60.0% | |
| GGGGGTTTGTGAGTGGAGGT+GGG | + | chr8_1:29414658-29414677 | None:intergenic | 60.0% | |
| AGGGGGTTTGTGAGTGGAGG+TGG | + | chr8_1:29414659-29414678 | None:intergenic | 60.0% | |
| CAGGCTCTACACGGTGCATC+TGG | - | chr8_1:29417034-29417053 | Msa1188780:intron | 60.0% | |
| AAGGGTGAGGGGGAACACAG+AGG | - | chr8_1:29417227-29417246 | Msa1188780:CDS | 60.0% | |
| AGGGTGAGGGGGAACACAGA+GGG | - | chr8_1:29417228-29417247 | Msa1188780:CDS | 60.0% | |
| GGTAGGCCGCCTCCTAAGAC+AGG | - | chr8_1:29412202-29412221 | Msa1188780:intron | 65.0% | |
| !!! | GTGTGGGTTTTGGGGTGGGG+TGG | - | chr8_1:29413810-29413829 | Msa1188780:intron | 65.0% |
| !!! | GTGGGTTTTGGGGTGGGGTG+GGG | - | chr8_1:29413812-29413831 | Msa1188780:intron | 65.0% |
| !!! | GTTTTGGGGTGGGGTGGGGT+AGG | - | chr8_1:29413816-29413835 | Msa1188780:intron | 65.0% |
| ! | TTTGGGGTGGGGTGGGGTAG+GGG | - | chr8_1:29413818-29413837 | Msa1188780:intron | 65.0% |
| GGGTGAGGGGGAACACAGAG+GGG | - | chr8_1:29417229-29417248 | Msa1188780:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 29411841 | 29418362 | 29411841 | ID=Msa1188780;Name=Msa1188780 |
| chr8_1 | mRNA | 29411841 | 29418362 | 29411841 | ID=Msa1188780-mRNA-1;Parent=Msa1188780;Name=Msa1188780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=195|1|1|1|0.85|0.75|8|176|387 |
| chr8_1 | exon | 29411841 | 29412145 | 29411841 | ID=Msa1188780-mRNA-1:exon:10390;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29413029 | 29413166 | 29413029 | ID=Msa1188780-mRNA-1:exon:10389;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29414682 | 29414866 | 29414682 | ID=Msa1188780-mRNA-1:exon:10388;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29416061 | 29416247 | 29416061 | ID=Msa1188780-mRNA-1:exon:10387;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29417124 | 29417346 | 29417124 | ID=Msa1188780-mRNA-1:exon:10386;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29417656 | 29417790 | 29417656 | ID=Msa1188780-mRNA-1:exon:10385;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29417868 | 29418107 | 29417868 | ID=Msa1188780-mRNA-1:exon:10384;Parent=Msa1188780-mRNA-1 |
| chr8_1 | exon | 29418241 | 29418362 | 29418241 | ID=Msa1188780-mRNA-1:exon:10383;Parent=Msa1188780-mRNA-1 |
| chr8_1 | five_prime_UTR | 29418241 | 29418362 | 29418241 | ID=Msa1188780-mRNA-1:five_prime_utr;Parent=Msa1188780-mRNA-1 |
| chr8_1 | five_prime_UTR | 29418035 | 29418107 | 29418035 | ID=Msa1188780-mRNA-1:five_prime_utr;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29417868 | 29418034 | 29417868 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29417656 | 29417790 | 29417656 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29417124 | 29417346 | 29417124 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29416061 | 29416247 | 29416061 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29414682 | 29414866 | 29414682 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29413029 | 29413166 | 29413029 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | CDS | 29412017 | 29412145 | 29412017 | ID=Msa1188780-mRNA-1:cds;Parent=Msa1188780-mRNA-1 |
| chr8_1 | three_prime_UTR | 29411841 | 29412016 | 29411841 | ID=Msa1188780-mRNA-1:three_prime_utr;Parent=Msa1188780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
