Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191610 | sp|E7C196|MER_ERYCB | 61.231 | 325 | 113 | 3 | 4 | 315 | 3 | 327 | 1.97e-135 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191610 | G7JL30 | 96.190 | 315 | 12 | 0 | 1 | 315 | 1 | 315 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0606450 | Msa1191610 | 0.935261 | 1.119180e-96 | -8.615850e-47 |
| Msa0184150 | Msa1191610 | 0.929178 | 1.008109e-92 | -8.615850e-47 |
| Msa1191610 | Msa1191630 | 0.825042 | 5.815422e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191610 | MtrunA17_Chr6g0480021 | 73.438 | 320 | 61 | 3 | 1 | 314 | 1 | 302 | 8.12e-172 | 478 |
| Msa1191610 | MtrunA17_Chr6g0480011 | 65.528 | 322 | 104 | 3 | 1 | 315 | 1 | 322 | 4.06e-156 | 439 |
| Msa1191610 | MtrunA17_Chr6g0479981 | 61.950 | 318 | 114 | 3 | 1 | 312 | 1 | 317 | 7.10e-149 | 421 |
| Msa1191610 | MtrunA17_Chr4g0036261 | 97.826 | 184 | 4 | 0 | 132 | 315 | 1 | 184 | 5.14e-133 | 375 |
| Msa1191610 | MtrunA17_Chr1g0173621 | 52.469 | 324 | 137 | 3 | 1 | 315 | 1 | 316 | 3.54e-116 | 338 |
| Msa1191610 | MtrunA17_Chr4g0036301 | 91.813 | 171 | 14 | 0 | 144 | 314 | 1 | 171 | 3.75e-113 | 324 |
| Msa1191610 | MtrunA17_Chr4g0036321 | 88.372 | 172 | 20 | 0 | 144 | 315 | 1 | 172 | 4.76e-109 | 314 |
| Msa1191610 | MtrunA17_Chr3g0121001 | 50.949 | 316 | 137 | 5 | 6 | 312 | 7 | 313 | 1.26e-107 | 316 |
| Msa1191610 | MtrunA17_Chr5g0447941 | 52.174 | 299 | 133 | 4 | 1 | 291 | 1 | 297 | 7.22e-95 | 283 |
| Msa1191610 | MtrunA17_Chr5g0447951 | 52.174 | 299 | 133 | 4 | 1 | 291 | 1 | 297 | 7.62e-95 | 283 |
| Msa1191610 | MtrunA17_Chr5g0447961 | 52.174 | 299 | 133 | 4 | 1 | 291 | 1 | 297 | 7.62e-95 | 283 |
| Msa1191610 | MtrunA17_Chr4g0018921 | 46.057 | 317 | 162 | 5 | 5 | 315 | 2 | 315 | 6.08e-94 | 281 |
| Msa1191610 | MtrunA17_Chr8g0368921 | 45.367 | 313 | 160 | 5 | 11 | 315 | 10 | 319 | 8.15e-89 | 268 |
| Msa1191610 | MtrunA17_Chr8g0368931 | 43.689 | 309 | 167 | 4 | 11 | 315 | 10 | 315 | 2.70e-85 | 259 |
| Msa1191610 | MtrunA17_Chr4g0009531 | 45.631 | 309 | 159 | 5 | 11 | 315 | 10 | 313 | 9.43e-84 | 255 |
| Msa1191610 | MtrunA17_Chr7g0239701 | 43.366 | 309 | 167 | 5 | 11 | 315 | 14 | 318 | 4.38e-80 | 246 |
| Msa1191610 | MtrunA17_Chr4g0009581 | 46.078 | 306 | 147 | 5 | 11 | 312 | 11 | 302 | 3.75e-76 | 235 |
| Msa1191610 | MtrunA17_Chr4g0036251 | 94.059 | 101 | 6 | 0 | 1 | 101 | 1 | 101 | 3.94e-65 | 200 |
| Msa1191610 | MtrunA17_Chr7g0243551 | 40.860 | 279 | 156 | 4 | 11 | 286 | 17 | 289 | 4.37e-62 | 199 |
| Msa1191610 | MtrunA17_Chr4g0036051 | 39.519 | 291 | 160 | 6 | 9 | 286 | 3 | 290 | 8.07e-59 | 191 |
| Msa1191610 | MtrunA17_Chr4g0009621 | 46.473 | 241 | 115 | 3 | 75 | 314 | 1 | 228 | 1.82e-56 | 182 |
| Msa1191610 | MtrunA17_Chr4g0036311 | 80.189 | 106 | 15 | 2 | 1 | 100 | 1 | 106 | 5.59e-56 | 177 |
| Msa1191610 | MtrunA17_Chr4g0036291 | 77.358 | 106 | 18 | 2 | 1 | 100 | 1 | 106 | 1.50e-53 | 171 |
| Msa1191610 | MtrunA17_Chr6g0479811 | 64.486 | 107 | 38 | 0 | 184 | 290 | 1 | 107 | 1.40e-46 | 153 |
| Msa1191610 | MtrunA17_Chr6g0479791 | 77.907 | 86 | 17 | 1 | 231 | 314 | 18 | 103 | 1.27e-39 | 134 |
| Msa1191610 | MtrunA17_Chr6g0479801 | 70.833 | 48 | 14 | 0 | 99 | 146 | 38 | 85 | 1.56e-18 | 79.0 |
| Msa1191610 | MtrunA17_Chr3g0127491 | 25.676 | 296 | 165 | 9 | 30 | 288 | 73 | 350 | 1.21e-16 | 79.7 |
| Msa1191610 | MtrunA17_Chr3g0095421 | 24.126 | 286 | 165 | 9 | 36 | 286 | 83 | 351 | 9.43e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191610 | AT1G59960.1 | 49.693 | 326 | 153 | 4 | 1 | 315 | 1 | 326 | 6.77e-118 | 343 |
| Msa1191610 | AT1G59950.1 | 50.654 | 306 | 144 | 2 | 17 | 315 | 15 | 320 | 9.09e-110 | 322 |
| Msa1191610 | AT2G37790.1 | 48.377 | 308 | 153 | 3 | 11 | 315 | 10 | 314 | 2.21e-98 | 293 |
| Msa1191610 | AT2G37770.2 | 48.544 | 309 | 152 | 4 | 11 | 315 | 10 | 315 | 2.16e-96 | 288 |
| Msa1191610 | AT3G53880.1 | 46.926 | 309 | 157 | 4 | 11 | 315 | 10 | 315 | 2.89e-91 | 275 |
| Msa1191610 | AT2G37760.2 | 46.405 | 306 | 159 | 4 | 11 | 315 | 10 | 311 | 2.89e-87 | 264 |
| Msa1191610 | AT2G37760.1 | 46.405 | 306 | 159 | 4 | 11 | 315 | 10 | 311 | 2.89e-87 | 264 |
| Msa1191610 | AT5G62420.1 | 44.444 | 315 | 159 | 8 | 11 | 315 | 8 | 316 | 3.65e-87 | 264 |
| Msa1191610 | AT3G53880.2 | 46.619 | 281 | 144 | 3 | 11 | 288 | 10 | 287 | 1.79e-80 | 247 |
| Msa1191610 | AT2G37760.5 | 46.429 | 280 | 146 | 3 | 11 | 290 | 10 | 285 | 8.59e-79 | 242 |
| Msa1191610 | AT2G37760.4 | 46.071 | 280 | 147 | 3 | 11 | 290 | 10 | 285 | 4.28e-78 | 240 |
| Msa1191610 | AT2G37760.3 | 46.071 | 280 | 147 | 3 | 11 | 290 | 10 | 285 | 4.28e-78 | 240 |
| Msa1191610 | AT5G01670.1 | 40.694 | 317 | 176 | 7 | 2 | 312 | 9 | 319 | 1.19e-77 | 240 |
| Msa1191610 | AT2G37760.6 | 47.126 | 261 | 134 | 3 | 56 | 315 | 8 | 265 | 1.39e-73 | 228 |
| Msa1191610 | AT2G37760.7 | 47.126 | 261 | 134 | 3 | 56 | 315 | 8 | 265 | 1.39e-73 | 228 |
| Msa1191610 | AT5G01670.2 | 37.500 | 344 | 176 | 8 | 2 | 312 | 9 | 346 | 1.70e-71 | 225 |
| Msa1191610 | AT2G21260.1 | 37.627 | 295 | 168 | 6 | 8 | 289 | 2 | 293 | 3.15e-67 | 213 |
| Msa1191610 | AT2G21250.1 | 37.755 | 294 | 167 | 6 | 8 | 288 | 2 | 292 | 1.89e-66 | 211 |
| Msa1191610 | AT2G37770.1 | 52.525 | 198 | 88 | 3 | 11 | 205 | 10 | 204 | 1.28e-62 | 200 |
| Msa1191610 | AT2G21250.2 | 38.298 | 235 | 129 | 6 | 8 | 229 | 2 | 233 | 3.63e-49 | 164 |
| Msa1191610 | AT2G21260.2 | 34.091 | 220 | 133 | 4 | 80 | 289 | 8 | 225 | 1.94e-43 | 149 |
| Msa1191610 | AT1G06690.1 | 26.042 | 288 | 157 | 8 | 36 | 286 | 94 | 362 | 5.47e-16 | 78.2 |
| Msa1191610 | AT1G60750.1 | 26.959 | 319 | 180 | 13 | 17 | 308 | 28 | 320 | 1.28e-11 | 65.1 |
Find 80 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTGTTTGAATAAATTA+TGG | 0.152648 | 8_1:+36325172 | Msa1191610:three_prime_UTR |
| ATGATTCCCTTTGATATAAA+AGG | 0.194226 | 8_1:+36323970 | Msa1191610:CDS |
| GCATCTTGTTTCAAACTTAC+TGG | 0.245807 | 8_1:-36323919 | None:intergenic |
| ATGCTTGATGCCATTGAAAT+AGG | 0.262072 | 8_1:+36323570 | Msa1191610:CDS |
| TTTGATACTGCTGCTCTCTA+TGG | 0.286783 | 8_1:+36323603 | Msa1191610:CDS |
| TGAAAGGTTAAACTTTAAAA+AGG | 0.291121 | 8_1:+36323942 | Msa1191610:CDS |
| AACTAATATCTTTAATTCAA+TGG | 0.331965 | 8_1:+36325340 | Msa1191610:three_prime_UTR |
| ATTAACTGCAGGAGCGATTT+CGG | 0.335579 | 8_1:-36324094 | None:intergenic |
| CAATGGGAATTGCCCCTTGC+TGG | 0.340720 | 8_1:-36324963 | None:intergenic |
| TTCTTGTTTGAATAAATTAT+GGG | 0.341458 | 8_1:+36325173 | Msa1191610:three_prime_UTR |
| TCTGCAATTTCGCGCAGAAT+TGG | 0.343221 | 8_1:-36324581 | None:intergenic |
| CCAGAGGTGGTACTAAATTC+AGG | 0.359326 | 8_1:+36323492 | Msa1191610:CDS |
| AAAACATTGAAATATTTGAT+TGG | 0.366649 | 8_1:+36325016 | Msa1191610:CDS |
| TTGAATAAATTATGGGATCA+TGG | 0.373137 | 8_1:+36325180 | Msa1191610:three_prime_UTR |
| TGAATTAAAGATATTAGTTA+AGG | 0.375566 | 8_1:-36325336 | None:intergenic |
| GAAATGTTTGTATCTGATAA+TGG | 0.381759 | 8_1:+36325102 | Msa1191610:CDS |
| TCTATTGGTGTTAGCAACTT+TGG | 0.384780 | 8_1:+36324039 | Msa1191610:CDS |
| TGTTCATTACTTCCAAGTTA+TGG | 0.391308 | 8_1:+36323697 | Msa1191610:CDS |
| AATCGCTCCTGCAGTTAATC+AGG | 0.399261 | 8_1:+36324098 | Msa1191610:CDS |
| AAACATTGAAATATTTGATT+GGG | 0.403714 | 8_1:+36325017 | Msa1191610:CDS |
| TGGATCTCTATTTGATTCAC+TGG | 0.404097 | 8_1:+36323896 | Msa1191610:CDS |
| AGGAGGATACAAACTAAGTT+GGG | 0.405550 | 8_1:+36324535 | Msa1191610:CDS |
| TATGGAAGAATGTTATAGAT+TGG | 0.407357 | 8_1:+36324005 | Msa1191610:CDS |
| AAGATGGCAATGATAGGCTT+TGG | 0.418986 | 8_1:+36323519 | Msa1191610:CDS |
| AGTTTCCCTTGTTGCCATGA+TGG | 0.420449 | 8_1:-36324461 | None:intergenic |
| GTTAAAAGTTCACTTACATA+AGG | 0.443614 | 8_1:-36325314 | None:intergenic |
| CCTGAATTTAGTACCACCTC+TGG | 0.450236 | 8_1:-36323492 | None:intergenic |
| ATGGAAGAATGTTATAGATT+GGG | 0.461984 | 8_1:+36324006 | Msa1191610:CDS |
| GTTTCCCTTGTTGCCATGAT+GGG | 0.465312 | 8_1:-36324460 | None:intergenic |
| GTTCACTTACATAAGGAACT+TGG | 0.466923 | 8_1:-36325307 | None:intergenic |
| TCATCAAAGCAGATTTCAAA+AGG | 0.467054 | 8_1:+36325077 | Msa1191610:CDS |
| TAGAAAGAAGAGTGTAGCCC+AGG | 0.476626 | 8_1:+36324607 | Msa1191610:CDS |
| AAAAGGAACATGGGAAGCTA+TGG | 0.478713 | 8_1:+36323987 | Msa1191610:CDS |
| TAGGAGGATACAAACTAAGT+TGG | 0.494689 | 8_1:+36324534 | Msa1191610:CDS |
| CCTTTGATATAAAAGGAACA+TGG | 0.498973 | 8_1:+36323977 | Msa1191610:CDS |
| AAATCTTGGATTGGAGTATG+TGG | 0.502430 | 8_1:+36323876 | Msa1191610:CDS |
| GCAATGATAGGCTTTGGAAC+AGG | 0.505923 | 8_1:+36323525 | Msa1191610:CDS |
| AGCATCAGTACACCATAACT+TGG | 0.506431 | 8_1:-36323709 | None:intergenic |
| TTGGGCCTAGCAAAGTCTAT+TGG | 0.512465 | 8_1:+36324024 | Msa1191610:CDS |
| TAACACCAATAGACTTTGCT+AGG | 0.512687 | 8_1:-36324029 | None:intergenic |
| GCCGTCCCACAGCTCTTCCA+AGG | 0.516692 | 8_1:-36325136 | None:intergenic |
| CAGAGGTGGTACTAAATTCA+GGG | 0.518724 | 8_1:+36323493 | Msa1191610:CDS |
| TTATGCAGATAGCACTAAGA+TGG | 0.518946 | 8_1:+36324935 | Msa1191610:intron |
| TCTTATACCTGATTAACTGC+AGG | 0.521626 | 8_1:-36324105 | None:intergenic |
| TAATGGACCTTACAAAACCT+TGG | 0.524158 | 8_1:+36325119 | Msa1191610:CDS |
| GTGTCAAAAGCTTTAGAGCT+AGG | 0.527948 | 8_1:+36323651 | Msa1191610:CDS |
| ATGTCTGTAGCCTATTTCAA+TGG | 0.534830 | 8_1:-36323580 | None:intergenic |
| TTGGGGTTCGCCTACCGTGA+TGG | 0.547041 | 8_1:+36324553 | Msa1191610:CDS |
| AGTAAACAATAATGCAATGA+GGG | 0.559981 | 8_1:+36325231 | Msa1191610:three_prime_UTR |
| AGGTGGAAATGAACCCATCA+TGG | 0.568456 | 8_1:+36324447 | Msa1191610:intron |
| AGAGAGTTCTGCAAGCAGAA+AGG | 0.571100 | 8_1:+36324485 | Msa1191610:CDS |
| GTTTGAAACAAGATGCTGAA+AGG | 0.572758 | 8_1:+36323926 | Msa1191610:CDS |
| CAAAACCTTGGAAGAGCTGT+GGG | 0.578336 | 8_1:+36325131 | Msa1191610:CDS |
| TAAGATGGATATACCAGCAA+GGG | 0.578343 | 8_1:+36324950 | Msa1191610:CDS |
| GTGAGTGCATGGTCACCACT+AGG | 0.581102 | 8_1:+36324515 | Msa1191610:CDS |
| ATGAACCCATCATGGCAACA+AGG | 0.585669 | 8_1:+36324455 | Msa1191610:CDS |
| AAGGAATCCATGTGAGTGCA+TGG | 0.586898 | 8_1:+36324504 | Msa1191610:CDS |
| CTTTGATATAAAAGGAACAT+GGG | 0.591862 | 8_1:+36323978 | Msa1191610:CDS |
| TGAACCCATCATGGCAACAA+GGG | 0.594189 | 8_1:+36324456 | Msa1191610:CDS |
| TTTGACACAGCTTGGCCTAG+AGG | 0.596039 | 8_1:-36323636 | None:intergenic |
| GCATCAAGCATAACTTGTTG+AGG | 0.602208 | 8_1:-36323558 | None:intergenic |
| TGAAAAGCTTCAACAAGGAG+AGG | 0.604183 | 8_1:+36324986 | Msa1191610:CDS |
| ACCTTGGAAGAGCTGTGGGA+CGG | 0.612908 | 8_1:+36325135 | Msa1191610:CDS |
| ACAAAACCTTGGAAGAGCTG+TGG | 0.614469 | 8_1:+36325130 | Msa1191610:CDS |
| GTGGTGACCATGCACTCACA+TGG | 0.614668 | 8_1:-36324511 | None:intergenic |
| TCAAGCATAACTTGTTGAGG+AGG | 0.617877 | 8_1:-36323555 | None:intergenic |
| TAGTAAACAATAATGCAATG+AGG | 0.619024 | 8_1:+36325230 | Msa1191610:three_prime_UTR |
| CTTAGTTTGTATCCTCCTAG+TGG | 0.625306 | 8_1:-36324530 | None:intergenic |
| TATGGAACTGAAGAACCTCT+AGG | 0.629164 | 8_1:+36323621 | Msa1191610:CDS |
| GGAAGCAAAGAAAGTTCCAG+AGG | 0.631521 | 8_1:+36323476 | Msa1191610:CDS |
| ATTGGATTCTCCATCACGGT+AGG | 0.633520 | 8_1:-36324563 | None:intergenic |
| CATTGTGAAAAGCTTCAACA+AGG | 0.641536 | 8_1:+36324981 | Msa1191610:CDS |
| AGCAAAGAAAGTTCCAGAGG+TGG | 0.646982 | 8_1:+36323479 | Msa1191610:CDS |
| AAATTATGCTTGCTTCAGAG+TGG | 0.661953 | 8_1:-36323763 | None:intergenic |
| AATTCTGCGCGAAATTGCAG+AGG | 0.665637 | 8_1:+36324583 | Msa1191610:CDS |
| GGAGGATACAAACTAAGTTG+GGG | 0.666842 | 8_1:+36324536 | Msa1191610:CDS |
| CTAAGATGGATATACCAGCA+AGG | 0.682956 | 8_1:+36324949 | Msa1191610:CDS |
| AGTGCATGGTCACCACTAGG+AGG | 0.692544 | 8_1:+36324518 | Msa1191610:CDS |
| AAGATGGATATACCAGCAAG+GGG | 0.693926 | 8_1:+36324951 | Msa1191610:CDS |
| CAGAATTGGATTCTCCATCA+CGG | 0.696091 | 8_1:-36324567 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATTGTTTTGGTTTTT+CGG | + | chr8_1:36323838-36323857 | Msa1191610:intron | 15.0% |
| !!! | TTGATATTTTTTAGAAATCT+TGG | + | chr8_1:36323862-36323881 | Msa1191610:intron | 15.0% |
| !! | AAAGAATGAGAATAAATTAT+TGG | - | chr8_1:36324281-36324300 | None:intergenic | 15.0% |
| !!! | TTTTGTTACATATTCTTATT+TGG | + | chr8_1:36324420-36324439 | Msa1191610:intron | 15.0% |
| !!! | AACCTTATCAAAATTTTAAT+TGG | - | chr8_1:36324664-36324683 | None:intergenic | 15.0% |
| !! | AAAACATTGAAATATTTGAT+TGG | + | chr8_1:36325016-36325035 | Msa1191610:CDS | 15.0% |
| !! | AAACATTGAAATATTTGATT+GGG | + | chr8_1:36325017-36325036 | Msa1191610:CDS | 15.0% |
| !!! | ATTCTTGTTTGAATAAATTA+TGG | + | chr8_1:36325172-36325191 | Msa1191610:three_prime_UTR | 15.0% |
| !!! | TTCTTGTTTGAATAAATTAT+GGG | + | chr8_1:36325173-36325192 | Msa1191610:three_prime_UTR | 15.0% |
| !! | TGAATTAAAGATATTAGTTA+AGG | - | chr8_1:36325339-36325358 | None:intergenic | 15.0% |
| !! | AACTAATATCTTTAATTCAA+TGG | + | chr8_1:36325340-36325359 | Msa1191610:three_prime_UTR | 15.0% |
| !!! | ATATTATTGTTTTGGTTTTT+CGG | + | chr8_1:36323838-36323857 | Msa1191610:intron | 15.0% |
| !!! | TTGATATTTTTTAGAAATCT+TGG | + | chr8_1:36323862-36323881 | Msa1191610:intron | 15.0% |
| !! | AAAGAATGAGAATAAATTAT+TGG | - | chr8_1:36324281-36324300 | None:intergenic | 15.0% |
| !!! | TTTTGTTACATATTCTTATT+TGG | + | chr8_1:36324420-36324439 | Msa1191610:intron | 15.0% |
| !!! | AACCTTATCAAAATTTTAAT+TGG | - | chr8_1:36324664-36324683 | None:intergenic | 15.0% |
| !! | AAAACATTGAAATATTTGAT+TGG | + | chr8_1:36325016-36325035 | Msa1191610:CDS | 15.0% |
| !! | AAACATTGAAATATTTGATT+GGG | + | chr8_1:36325017-36325036 | Msa1191610:CDS | 15.0% |
| !!! | ATTCTTGTTTGAATAAATTA+TGG | + | chr8_1:36325172-36325191 | Msa1191610:three_prime_UTR | 15.0% |
| !!! | TTCTTGTTTGAATAAATTAT+GGG | + | chr8_1:36325173-36325192 | Msa1191610:three_prime_UTR | 15.0% |
| !! | TGAATTAAAGATATTAGTTA+AGG | - | chr8_1:36325339-36325358 | None:intergenic | 15.0% |
| !! | AACTAATATCTTTAATTCAA+TGG | + | chr8_1:36325340-36325359 | Msa1191610:three_prime_UTR | 15.0% |
| !!! | CTTGTCTAATATTATTGTTT+TGG | + | chr8_1:36323830-36323849 | Msa1191610:intron | 20.0% |
| !!! | ATTTTTTAGAAATCTTGGAT+TGG | + | chr8_1:36323867-36323886 | Msa1191610:intron | 20.0% |
| !!! | TGAAAGGTTAAACTTTAAAA+AGG | + | chr8_1:36323942-36323961 | Msa1191610:CDS | 20.0% |
| !! | ATAGATTCAATACACTTAAT+TGG | + | chr8_1:36324162-36324181 | Msa1191610:intron | 20.0% |
| !!! | ACATATTCTTATTTGGATTT+AGG | + | chr8_1:36324427-36324446 | Msa1191610:intron | 20.0% |
| !!! | AGCCAATTAAAATTTTGATA+AGG | + | chr8_1:36324659-36324678 | Msa1191610:intron | 20.0% |
| !! | AAGCTGAATTATAAAACAAA+GGG | - | chr8_1:36324700-36324719 | None:intergenic | 20.0% |
| !! | AAAGCTGAATTATAAAACAA+AGG | - | chr8_1:36324701-36324720 | None:intergenic | 20.0% |
| !!! | ATTCAGCTTTTTTTTTTCAA+TGG | + | chr8_1:36324711-36324730 | Msa1191610:intron | 20.0% |
| !! | TCATGATGTGATATTATATT+AGG | - | chr8_1:36324764-36324783 | None:intergenic | 20.0% |
| !!! | CTTGTCTAATATTATTGTTT+TGG | + | chr8_1:36323830-36323849 | Msa1191610:intron | 20.0% |
| !!! | ATTTTTTAGAAATCTTGGAT+TGG | + | chr8_1:36323867-36323886 | Msa1191610:intron | 20.0% |
| !!! | TGAAAGGTTAAACTTTAAAA+AGG | + | chr8_1:36323942-36323961 | Msa1191610:CDS | 20.0% |
| !! | ATAGATTCAATACACTTAAT+TGG | + | chr8_1:36324162-36324181 | Msa1191610:intron | 20.0% |
| !!! | ACATATTCTTATTTGGATTT+AGG | + | chr8_1:36324427-36324446 | Msa1191610:intron | 20.0% |
| !!! | AGCCAATTAAAATTTTGATA+AGG | + | chr8_1:36324659-36324678 | Msa1191610:intron | 20.0% |
| !! | AAGCTGAATTATAAAACAAA+GGG | - | chr8_1:36324700-36324719 | None:intergenic | 20.0% |
| !! | AAAGCTGAATTATAAAACAA+AGG | - | chr8_1:36324701-36324720 | None:intergenic | 20.0% |
| !!! | ATTCAGCTTTTTTTTTTCAA+TGG | + | chr8_1:36324711-36324730 | Msa1191610:intron | 20.0% |
| !! | TCATGATGTGATATTATATT+AGG | - | chr8_1:36324764-36324783 | None:intergenic | 20.0% |
| !! | AAGGTTAAACTTTAAAAAGG+AGG | + | chr8_1:36323945-36323964 | Msa1191610:CDS | 25.0% |
| ! | ATGATTCCCTTTGATATAAA+AGG | + | chr8_1:36323970-36323989 | Msa1191610:CDS | 25.0% |
| !! | CATGTTCCTTTTATATCAAA+GGG | - | chr8_1:36323979-36323998 | None:intergenic | 25.0% |
| ! | CTTTGATATAAAAGGAACAT+GGG | + | chr8_1:36323978-36323997 | Msa1191610:CDS | 25.0% |
| ! | TATGGAAGAATGTTATAGAT+TGG | + | chr8_1:36324005-36324024 | Msa1191610:CDS | 25.0% |
| ! | ATGGAAGAATGTTATAGATT+GGG | + | chr8_1:36324006-36324025 | Msa1191610:CDS | 25.0% |
| !!! | TTTCGATTTTGAAGTAACTT+AGG | - | chr8_1:36324191-36324210 | None:intergenic | 25.0% |
| ! | TATTGGATACTATTTGCATA+GGG | - | chr8_1:36324264-36324283 | None:intergenic | 25.0% |
| ! | TTATTGGATACTATTTGCAT+AGG | - | chr8_1:36324265-36324284 | None:intergenic | 25.0% |
| ! | ATATCTAGATAACAATTGTG+TGG | - | chr8_1:36324363-36324382 | None:intergenic | 25.0% |
| !! | TATTCTTATTTGGATTTAGG+TGG | + | chr8_1:36324430-36324449 | Msa1191610:intron | 25.0% |
| ! | GAAATGTTTGTATCTGATAA+TGG | + | chr8_1:36325102-36325121 | Msa1191610:CDS | 25.0% |
| ! | TTGAATAAATTATGGGATCA+TGG | + | chr8_1:36325180-36325199 | Msa1191610:three_prime_UTR | 25.0% |
| ! | TAGTAAACAATAATGCAATG+AGG | + | chr8_1:36325230-36325249 | Msa1191610:three_prime_UTR | 25.0% |
| ! | AGTAAACAATAATGCAATGA+GGG | + | chr8_1:36325231-36325250 | Msa1191610:three_prime_UTR | 25.0% |
| ! | GTTAAAAGTTCACTTACATA+AGG | - | chr8_1:36325317-36325336 | None:intergenic | 25.0% |
| !! | AAGGTTAAACTTTAAAAAGG+AGG | + | chr8_1:36323945-36323964 | Msa1191610:CDS | 25.0% |
| ! | ATGATTCCCTTTGATATAAA+AGG | + | chr8_1:36323970-36323989 | Msa1191610:CDS | 25.0% |
| !! | CATGTTCCTTTTATATCAAA+GGG | - | chr8_1:36323979-36323998 | None:intergenic | 25.0% |
| ! | CTTTGATATAAAAGGAACAT+GGG | + | chr8_1:36323978-36323997 | Msa1191610:CDS | 25.0% |
| ! | TATGGAAGAATGTTATAGAT+TGG | + | chr8_1:36324005-36324024 | Msa1191610:CDS | 25.0% |
| ! | ATGGAAGAATGTTATAGATT+GGG | + | chr8_1:36324006-36324025 | Msa1191610:CDS | 25.0% |
| !!! | TTTCGATTTTGAAGTAACTT+AGG | - | chr8_1:36324191-36324210 | None:intergenic | 25.0% |
| ! | TATTGGATACTATTTGCATA+GGG | - | chr8_1:36324264-36324283 | None:intergenic | 25.0% |
| ! | TTATTGGATACTATTTGCAT+AGG | - | chr8_1:36324265-36324284 | None:intergenic | 25.0% |
| ! | ATATCTAGATAACAATTGTG+TGG | - | chr8_1:36324363-36324382 | None:intergenic | 25.0% |
| !! | TATTCTTATTTGGATTTAGG+TGG | + | chr8_1:36324430-36324449 | Msa1191610:intron | 25.0% |
| ! | GAAATGTTTGTATCTGATAA+TGG | + | chr8_1:36325102-36325121 | Msa1191610:CDS | 25.0% |
| ! | TTGAATAAATTATGGGATCA+TGG | + | chr8_1:36325180-36325199 | Msa1191610:three_prime_UTR | 25.0% |
| ! | TAGTAAACAATAATGCAATG+AGG | + | chr8_1:36325230-36325249 | Msa1191610:three_prime_UTR | 25.0% |
| ! | AGTAAACAATAATGCAATGA+GGG | + | chr8_1:36325231-36325250 | Msa1191610:three_prime_UTR | 25.0% |
| ! | GTTAAAAGTTCACTTACATA+AGG | - | chr8_1:36325317-36325336 | None:intergenic | 25.0% |
| ACTAAATTCAGGGAAAAAGA+TGG | + | chr8_1:36323503-36323522 | Msa1191610:CDS | 30.0% | |
| TGTTCATTACTTCCAAGTTA+TGG | + | chr8_1:36323697-36323716 | Msa1191610:CDS | 30.0% | |
| ! | CCATGTTCCTTTTATATCAA+AGG | - | chr8_1:36323980-36323999 | None:intergenic | 30.0% |
| CCTTTGATATAAAAGGAACA+TGG | + | chr8_1:36323977-36323996 | Msa1191610:CDS | 30.0% | |
| ATAACAATTGTGTGGTTAGT+CGG | - | chr8_1:36324355-36324374 | None:intergenic | 30.0% | |
| !!! | AATCTAAGGTTTTGAAGAGT+TGG | - | chr8_1:36324788-36324807 | None:intergenic | 30.0% |
| CTTCAAAACCTTAGATTGTT+AGG | + | chr8_1:36324791-36324810 | Msa1191610:intron | 30.0% | |
| GTTAGGTGAGAACAAATAAT+TGG | + | chr8_1:36324808-36324827 | Msa1191610:intron | 30.0% | |
| ! | TTGTTGAAGCTTTTCACAAT+GGG | - | chr8_1:36324982-36325001 | None:intergenic | 30.0% |
| TCATCAAAGCAGATTTCAAA+AGG | + | chr8_1:36325077-36325096 | Msa1191610:CDS | 30.0% | |
| ACTAAATTCAGGGAAAAAGA+TGG | + | chr8_1:36323503-36323522 | Msa1191610:CDS | 30.0% | |
| TGTTCATTACTTCCAAGTTA+TGG | + | chr8_1:36323697-36323716 | Msa1191610:CDS | 30.0% | |
| ! | CCATGTTCCTTTTATATCAA+AGG | - | chr8_1:36323980-36323999 | None:intergenic | 30.0% |
| CCTTTGATATAAAAGGAACA+TGG | + | chr8_1:36323977-36323996 | Msa1191610:CDS | 30.0% | |
| ATAACAATTGTGTGGTTAGT+CGG | - | chr8_1:36324355-36324374 | None:intergenic | 30.0% | |
| !!! | AATCTAAGGTTTTGAAGAGT+TGG | - | chr8_1:36324788-36324807 | None:intergenic | 30.0% |
| CTTCAAAACCTTAGATTGTT+AGG | + | chr8_1:36324791-36324810 | Msa1191610:intron | 30.0% | |
| GTTAGGTGAGAACAAATAAT+TGG | + | chr8_1:36324808-36324827 | Msa1191610:intron | 30.0% | |
| ! | TTGTTGAAGCTTTTCACAAT+GGG | - | chr8_1:36324982-36325001 | None:intergenic | 30.0% |
| TCATCAAAGCAGATTTCAAA+AGG | + | chr8_1:36325077-36325096 | Msa1191610:CDS | 30.0% | |
| ATGCTTGATGCCATTGAAAT+AGG | + | chr8_1:36323570-36323589 | Msa1191610:CDS | 35.0% | |
| ATGTCTGTAGCCTATTTCAA+TGG | - | chr8_1:36323583-36323602 | None:intergenic | 35.0% | |
| AAATTATGCTTGCTTCAGAG+TGG | - | chr8_1:36323766-36323785 | None:intergenic | 35.0% | |
| ! | AAATCTTGGATTGGAGTATG+TGG | + | chr8_1:36323876-36323895 | Msa1191610:CDS | 35.0% |
| TGGATCTCTATTTGATTCAC+TGG | + | chr8_1:36323896-36323915 | Msa1191610:CDS | 35.0% | |
| ! | GCATCTTGTTTCAAACTTAC+TGG | - | chr8_1:36323922-36323941 | None:intergenic | 35.0% |
| ! | GTTTGAAACAAGATGCTGAA+AGG | + | chr8_1:36323926-36323945 | Msa1191610:CDS | 35.0% |
| TAACACCAATAGACTTTGCT+AGG | - | chr8_1:36324032-36324051 | None:intergenic | 35.0% | |
| !! | TCTATTGGTGTTAGCAACTT+TGG | + | chr8_1:36324039-36324058 | Msa1191610:CDS | 35.0% |
| !! | TTCGGCATTTTCTAAGAGTA+TGG | - | chr8_1:36324079-36324098 | None:intergenic | 35.0% |
| TCTTATACCTGATTAACTGC+AGG | - | chr8_1:36324108-36324127 | None:intergenic | 35.0% | |
| TGTCTGACATGTATCAGTAT+CGG | - | chr8_1:36324238-36324257 | None:intergenic | 35.0% | |
| !! | ATGTATTCGAGAAGTATCAG+TGG | - | chr8_1:36324316-36324335 | None:intergenic | 35.0% |
| TAGGAGGATACAAACTAAGT+TGG | + | chr8_1:36324534-36324553 | Msa1191610:CDS | 35.0% | |
| AGGAGGATACAAACTAAGTT+GGG | + | chr8_1:36324535-36324554 | Msa1191610:CDS | 35.0% | |
| TAAAATAATGAGCTGCACCT+GGG | - | chr8_1:36324627-36324646 | None:intergenic | 35.0% | |
| ATAAAATAATGAGCTGCACC+TGG | - | chr8_1:36324628-36324647 | None:intergenic | 35.0% | |
| CAATGGTCAAACTTTAGACT+TGG | + | chr8_1:36324728-36324747 | Msa1191610:intron | 35.0% | |
| TGTTCTCACCTAACAATCTA+AGG | - | chr8_1:36324802-36324821 | None:intergenic | 35.0% | |
| TTATGCAGATAGCACTAAGA+TGG | + | chr8_1:36324935-36324954 | Msa1191610:intron | 35.0% | |
| TAAGATGGATATACCAGCAA+GGG | + | chr8_1:36324950-36324969 | Msa1191610:CDS | 35.0% | |
| ! | CTTGTTGAAGCTTTTCACAA+TGG | - | chr8_1:36324983-36325002 | None:intergenic | 35.0% |
| CATTGTGAAAAGCTTCAACA+AGG | + | chr8_1:36324981-36325000 | Msa1191610:CDS | 35.0% | |
| ! | TAATGGACCTTACAAAACCT+TGG | + | chr8_1:36325119-36325138 | Msa1191610:CDS | 35.0% |
| GTTCACTTACATAAGGAACT+TGG | - | chr8_1:36325310-36325329 | None:intergenic | 35.0% | |
| ATGCTTGATGCCATTGAAAT+AGG | + | chr8_1:36323570-36323589 | Msa1191610:CDS | 35.0% | |
| ATGTCTGTAGCCTATTTCAA+TGG | - | chr8_1:36323583-36323602 | None:intergenic | 35.0% | |
| AAATTATGCTTGCTTCAGAG+TGG | - | chr8_1:36323766-36323785 | None:intergenic | 35.0% | |
| ! | AAATCTTGGATTGGAGTATG+TGG | + | chr8_1:36323876-36323895 | Msa1191610:CDS | 35.0% |
| TGGATCTCTATTTGATTCAC+TGG | + | chr8_1:36323896-36323915 | Msa1191610:CDS | 35.0% | |
| ! | GCATCTTGTTTCAAACTTAC+TGG | - | chr8_1:36323922-36323941 | None:intergenic | 35.0% |
| ! | GTTTGAAACAAGATGCTGAA+AGG | + | chr8_1:36323926-36323945 | Msa1191610:CDS | 35.0% |
| TAACACCAATAGACTTTGCT+AGG | - | chr8_1:36324032-36324051 | None:intergenic | 35.0% | |
| !! | TCTATTGGTGTTAGCAACTT+TGG | + | chr8_1:36324039-36324058 | Msa1191610:CDS | 35.0% |
| !! | TTCGGCATTTTCTAAGAGTA+TGG | - | chr8_1:36324079-36324098 | None:intergenic | 35.0% |
| TCTTATACCTGATTAACTGC+AGG | - | chr8_1:36324108-36324127 | None:intergenic | 35.0% | |
| TGTCTGACATGTATCAGTAT+CGG | - | chr8_1:36324238-36324257 | None:intergenic | 35.0% | |
| !! | ATGTATTCGAGAAGTATCAG+TGG | - | chr8_1:36324316-36324335 | None:intergenic | 35.0% |
| TAGGAGGATACAAACTAAGT+TGG | + | chr8_1:36324534-36324553 | Msa1191610:CDS | 35.0% | |
| AGGAGGATACAAACTAAGTT+GGG | + | chr8_1:36324535-36324554 | Msa1191610:CDS | 35.0% | |
| TAAAATAATGAGCTGCACCT+GGG | - | chr8_1:36324627-36324646 | None:intergenic | 35.0% | |
| ATAAAATAATGAGCTGCACC+TGG | - | chr8_1:36324628-36324647 | None:intergenic | 35.0% | |
| CAATGGTCAAACTTTAGACT+TGG | + | chr8_1:36324728-36324747 | Msa1191610:intron | 35.0% | |
| TGTTCTCACCTAACAATCTA+AGG | - | chr8_1:36324802-36324821 | None:intergenic | 35.0% | |
| TTATGCAGATAGCACTAAGA+TGG | + | chr8_1:36324935-36324954 | Msa1191610:intron | 35.0% | |
| TAAGATGGATATACCAGCAA+GGG | + | chr8_1:36324950-36324969 | Msa1191610:CDS | 35.0% | |
| ! | CTTGTTGAAGCTTTTCACAA+TGG | - | chr8_1:36324983-36325002 | None:intergenic | 35.0% |
| CATTGTGAAAAGCTTCAACA+AGG | + | chr8_1:36324981-36325000 | Msa1191610:CDS | 35.0% | |
| ! | TAATGGACCTTACAAAACCT+TGG | + | chr8_1:36325119-36325138 | Msa1191610:CDS | 35.0% |
| GTTCACTTACATAAGGAACT+TGG | - | chr8_1:36325310-36325329 | None:intergenic | 35.0% | |
| CAGAGGTGGTACTAAATTCA+GGG | + | chr8_1:36323493-36323512 | Msa1191610:CDS | 40.0% | |
| GGGAAAAAGATGGCAATGAT+AGG | + | chr8_1:36323513-36323532 | Msa1191610:CDS | 40.0% | |
| AAGATGGCAATGATAGGCTT+TGG | + | chr8_1:36323519-36323538 | Msa1191610:CDS | 40.0% | |
| !! | TCAAGCATAACTTGTTGAGG+AGG | - | chr8_1:36323558-36323577 | None:intergenic | 40.0% |
| !! | GCATCAAGCATAACTTGTTG+AGG | - | chr8_1:36323561-36323580 | None:intergenic | 40.0% |
| TTTGATACTGCTGCTCTCTA+TGG | + | chr8_1:36323603-36323622 | Msa1191610:CDS | 40.0% | |
| TATGGAACTGAAGAACCTCT+AGG | + | chr8_1:36323621-36323640 | Msa1191610:CDS | 40.0% | |
| ! | CTAAAGCTTTTGACACAGCT+TGG | - | chr8_1:36323647-36323666 | None:intergenic | 40.0% |
| !! | GTGTCAAAAGCTTTAGAGCT+AGG | + | chr8_1:36323651-36323670 | Msa1191610:CDS | 40.0% |
| ! | GTTCATCGCGATTTTTAACG+AGG | - | chr8_1:36323677-36323696 | None:intergenic | 40.0% |
| AGCATCAGTACACCATAACT+TGG | - | chr8_1:36323712-36323731 | None:intergenic | 40.0% | |
| AAAAGGAACATGGGAAGCTA+TGG | + | chr8_1:36323987-36324006 | Msa1191610:CDS | 40.0% | |
| ATTAACTGCAGGAGCGATTT+CGG | - | chr8_1:36324097-36324116 | None:intergenic | 40.0% | |
| !! | CTTAGTTTGTATCCTCCTAG+TGG | - | chr8_1:36324533-36324552 | None:intergenic | 40.0% |
| GGAGGATACAAACTAAGTTG+GGG | + | chr8_1:36324536-36324555 | Msa1191610:CDS | 40.0% | |
| CAGAATTGGATTCTCCATCA+CGG | - | chr8_1:36324570-36324589 | None:intergenic | 40.0% | |
| CTAAGATGGATATACCAGCA+AGG | + | chr8_1:36324949-36324968 | Msa1191610:CDS | 40.0% | |
| AAGATGGATATACCAGCAAG+GGG | + | chr8_1:36324951-36324970 | Msa1191610:CDS | 40.0% | |
| TGAAAAGCTTCAACAAGGAG+AGG | + | chr8_1:36324986-36325005 | Msa1191610:CDS | 40.0% | |
| !! | AGCTCTTCCAAGGTTTTGTA+AGG | - | chr8_1:36325129-36325148 | None:intergenic | 40.0% |
| GGAACTTTCTTTGCTTCCAT+AGG | - | chr8_1:36323474-36323493 | None:intergenic | 40.0% | |
| CAGAGGTGGTACTAAATTCA+GGG | + | chr8_1:36323493-36323512 | Msa1191610:CDS | 40.0% | |
| GGGAAAAAGATGGCAATGAT+AGG | + | chr8_1:36323513-36323532 | Msa1191610:CDS | 40.0% | |
| AAGATGGCAATGATAGGCTT+TGG | + | chr8_1:36323519-36323538 | Msa1191610:CDS | 40.0% | |
| !! | TCAAGCATAACTTGTTGAGG+AGG | - | chr8_1:36323558-36323577 | None:intergenic | 40.0% |
| !! | GCATCAAGCATAACTTGTTG+AGG | - | chr8_1:36323561-36323580 | None:intergenic | 40.0% |
| TTTGATACTGCTGCTCTCTA+TGG | + | chr8_1:36323603-36323622 | Msa1191610:CDS | 40.0% | |
| TATGGAACTGAAGAACCTCT+AGG | + | chr8_1:36323621-36323640 | Msa1191610:CDS | 40.0% | |
| ! | CTAAAGCTTTTGACACAGCT+TGG | - | chr8_1:36323647-36323666 | None:intergenic | 40.0% |
| !! | GTGTCAAAAGCTTTAGAGCT+AGG | + | chr8_1:36323651-36323670 | Msa1191610:CDS | 40.0% |
| ! | GTTCATCGCGATTTTTAACG+AGG | - | chr8_1:36323677-36323696 | None:intergenic | 40.0% |
| AGCATCAGTACACCATAACT+TGG | - | chr8_1:36323712-36323731 | None:intergenic | 40.0% | |
| AAAAGGAACATGGGAAGCTA+TGG | + | chr8_1:36323987-36324006 | Msa1191610:CDS | 40.0% | |
| ATTAACTGCAGGAGCGATTT+CGG | - | chr8_1:36324097-36324116 | None:intergenic | 40.0% | |
| !! | CTTAGTTTGTATCCTCCTAG+TGG | - | chr8_1:36324533-36324552 | None:intergenic | 40.0% |
| GGAGGATACAAACTAAGTTG+GGG | + | chr8_1:36324536-36324555 | Msa1191610:CDS | 40.0% | |
| CAGAATTGGATTCTCCATCA+CGG | - | chr8_1:36324570-36324589 | None:intergenic | 40.0% | |
| CTAAGATGGATATACCAGCA+AGG | + | chr8_1:36324949-36324968 | Msa1191610:CDS | 40.0% | |
| AAGATGGATATACCAGCAAG+GGG | + | chr8_1:36324951-36324970 | Msa1191610:CDS | 40.0% | |
| TGAAAAGCTTCAACAAGGAG+AGG | + | chr8_1:36324986-36325005 | Msa1191610:CDS | 40.0% | |
| !! | AGCTCTTCCAAGGTTTTGTA+AGG | - | chr8_1:36325129-36325148 | None:intergenic | 40.0% |
| GGAAGCAAAGAAAGTTCCAG+AGG | + | chr8_1:36323476-36323495 | Msa1191610:CDS | 45.0% | |
| AGCAAAGAAAGTTCCAGAGG+TGG | + | chr8_1:36323479-36323498 | Msa1191610:CDS | 45.0% | |
| CCTGAATTTAGTACCACCTC+TGG | - | chr8_1:36323495-36323514 | None:intergenic | 45.0% | |
| CCAGAGGTGGTACTAAATTC+AGG | + | chr8_1:36323492-36323511 | Msa1191610:CDS | 45.0% | |
| !! | GCAATGATAGGCTTTGGAAC+AGG | + | chr8_1:36323525-36323544 | Msa1191610:CDS | 45.0% |
| !! | TTTTGAGAGCTGGGAGAACA+AGG | - | chr8_1:36323743-36323762 | None:intergenic | 45.0% |
| !!! | TCAGAGTGGTTTTGAGAGCT+GGG | - | chr8_1:36323752-36323771 | None:intergenic | 45.0% |
| !!! | TTCAGAGTGGTTTTGAGAGC+TGG | - | chr8_1:36323753-36323772 | None:intergenic | 45.0% |
| TTGGGCCTAGCAAAGTCTAT+TGG | + | chr8_1:36324024-36324043 | Msa1191610:CDS | 45.0% | |
| AATCGCTCCTGCAGTTAATC+AGG | + | chr8_1:36324098-36324117 | Msa1191610:CDS | 45.0% | |
| AGGTGGAAATGAACCCATCA+TGG | + | chr8_1:36324447-36324466 | Msa1191610:intron | 45.0% | |
| ATGAACCCATCATGGCAACA+AGG | + | chr8_1:36324455-36324474 | Msa1191610:CDS | 45.0% | |
| TGAACCCATCATGGCAACAA+GGG | + | chr8_1:36324456-36324475 | Msa1191610:CDS | 45.0% | |
| GTTTCCCTTGTTGCCATGAT+GGG | - | chr8_1:36324463-36324482 | None:intergenic | 45.0% | |
| AGTTTCCCTTGTTGCCATGA+TGG | - | chr8_1:36324464-36324483 | None:intergenic | 45.0% | |
| AGAGAGTTCTGCAAGCAGAA+AGG | + | chr8_1:36324485-36324504 | Msa1191610:CDS | 45.0% | |
| AAGGAATCCATGTGAGTGCA+TGG | + | chr8_1:36324504-36324523 | Msa1191610:CDS | 45.0% | |
| ATTGGATTCTCCATCACGGT+AGG | - | chr8_1:36324566-36324585 | None:intergenic | 45.0% | |
| TCTGCAATTTCGCGCAGAAT+TGG | - | chr8_1:36324584-36324603 | None:intergenic | 45.0% | |
| AATTCTGCGCGAAATTGCAG+AGG | + | chr8_1:36324583-36324602 | Msa1191610:CDS | 45.0% | |
| ! | TAGAAAGAAGAGTGTAGCCC+AGG | + | chr8_1:36324607-36324626 | Msa1191610:CDS | 45.0% |
| ACAAAACCTTGGAAGAGCTG+TGG | + | chr8_1:36325130-36325149 | Msa1191610:CDS | 45.0% | |
| CAAAACCTTGGAAGAGCTGT+GGG | + | chr8_1:36325131-36325150 | Msa1191610:CDS | 45.0% | |
| GGAAGCAAAGAAAGTTCCAG+AGG | + | chr8_1:36323476-36323495 | Msa1191610:CDS | 45.0% | |
| AGCAAAGAAAGTTCCAGAGG+TGG | + | chr8_1:36323479-36323498 | Msa1191610:CDS | 45.0% | |
| CCTGAATTTAGTACCACCTC+TGG | - | chr8_1:36323495-36323514 | None:intergenic | 45.0% | |
| CCAGAGGTGGTACTAAATTC+AGG | + | chr8_1:36323492-36323511 | Msa1191610:CDS | 45.0% | |
| !! | GCAATGATAGGCTTTGGAAC+AGG | + | chr8_1:36323525-36323544 | Msa1191610:CDS | 45.0% |
| !! | TTTTGAGAGCTGGGAGAACA+AGG | - | chr8_1:36323743-36323762 | None:intergenic | 45.0% |
| !!! | TCAGAGTGGTTTTGAGAGCT+GGG | - | chr8_1:36323752-36323771 | None:intergenic | 45.0% |
| !!! | TTCAGAGTGGTTTTGAGAGC+TGG | - | chr8_1:36323753-36323772 | None:intergenic | 45.0% |
| TTGGGCCTAGCAAAGTCTAT+TGG | + | chr8_1:36324024-36324043 | Msa1191610:CDS | 45.0% | |
| AATCGCTCCTGCAGTTAATC+AGG | + | chr8_1:36324098-36324117 | Msa1191610:CDS | 45.0% | |
| AGGTGGAAATGAACCCATCA+TGG | + | chr8_1:36324447-36324466 | Msa1191610:intron | 45.0% | |
| ATGAACCCATCATGGCAACA+AGG | + | chr8_1:36324455-36324474 | Msa1191610:CDS | 45.0% | |
| TGAACCCATCATGGCAACAA+GGG | + | chr8_1:36324456-36324475 | Msa1191610:CDS | 45.0% | |
| GTTTCCCTTGTTGCCATGAT+GGG | - | chr8_1:36324463-36324482 | None:intergenic | 45.0% | |
| AGTTTCCCTTGTTGCCATGA+TGG | - | chr8_1:36324464-36324483 | None:intergenic | 45.0% | |
| AGAGAGTTCTGCAAGCAGAA+AGG | + | chr8_1:36324485-36324504 | Msa1191610:CDS | 45.0% | |
| AAGGAATCCATGTGAGTGCA+TGG | + | chr8_1:36324504-36324523 | Msa1191610:CDS | 45.0% | |
| ATTGGATTCTCCATCACGGT+AGG | - | chr8_1:36324566-36324585 | None:intergenic | 45.0% | |
| TCTGCAATTTCGCGCAGAAT+TGG | - | chr8_1:36324584-36324603 | None:intergenic | 45.0% | |
| AATTCTGCGCGAAATTGCAG+AGG | + | chr8_1:36324583-36324602 | Msa1191610:CDS | 45.0% | |
| ! | TAGAAAGAAGAGTGTAGCCC+AGG | + | chr8_1:36324607-36324626 | Msa1191610:CDS | 45.0% |
| ACAAAACCTTGGAAGAGCTG+TGG | + | chr8_1:36325130-36325149 | Msa1191610:CDS | 45.0% | |
| CAAAACCTTGGAAGAGCTGT+GGG | + | chr8_1:36325131-36325150 | Msa1191610:CDS | 45.0% | |
| TTTGACACAGCTTGGCCTAG+AGG | - | chr8_1:36323639-36323658 | None:intergenic | 50.0% | |
| TTTGACACAGCTTGGCCTAG+AGG | - | chr8_1:36323639-36323658 | None:intergenic | 50.0% | |
| GTGGTGACCATGCACTCACA+TGG | - | chr8_1:36324514-36324533 | None:intergenic | 55.0% | |
| GTGAGTGCATGGTCACCACT+AGG | + | chr8_1:36324515-36324534 | Msa1191610:CDS | 55.0% | |
| AGTGCATGGTCACCACTAGG+AGG | + | chr8_1:36324518-36324537 | Msa1191610:CDS | 55.0% | |
| CAATGGGAATTGCCCCTTGC+TGG | - | chr8_1:36324966-36324985 | None:intergenic | 55.0% | |
| ACCTTGGAAGAGCTGTGGGA+CGG | + | chr8_1:36325135-36325154 | Msa1191610:CDS | 55.0% | |
| GTGGTGACCATGCACTCACA+TGG | - | chr8_1:36324514-36324533 | None:intergenic | 55.0% | |
| GTGAGTGCATGGTCACCACT+AGG | + | chr8_1:36324515-36324534 | Msa1191610:CDS | 55.0% | |
| AGTGCATGGTCACCACTAGG+AGG | + | chr8_1:36324518-36324537 | Msa1191610:CDS | 55.0% | |
| CAATGGGAATTGCCCCTTGC+TGG | - | chr8_1:36324966-36324985 | None:intergenic | 55.0% | |
| ACCTTGGAAGAGCTGTGGGA+CGG | + | chr8_1:36325135-36325154 | Msa1191610:CDS | 55.0% | |
| TTGGGGTTCGCCTACCGTGA+TGG | + | chr8_1:36324553-36324572 | Msa1191610:CDS | 60.0% | |
| TTGGGGTTCGCCTACCGTGA+TGG | + | chr8_1:36324553-36324572 | Msa1191610:CDS | 60.0% | |
| GCCGTCCCACAGCTCTTCCA+AGG | - | chr8_1:36325139-36325158 | None:intergenic | 65.0% | |
| GCCGTCCCACAGCTCTTCCA+AGG | - | chr8_1:36325139-36325158 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36323474 | 36325372 | 36323474 | ID=Msa1191610;Name=Msa1191610 |
| chr8_1 | mRNA | 36323474 | 36325372 | 36323474 | ID=Msa1191610-mRNA-1;Parent=Msa1191610;Name=Msa1191610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.66|0.5|1|1|1|4|205|315 |
| chr8_1 | exon | 36323474 | 36323772 | 36323474 | ID=Msa1191610-mRNA-1:exon:11978;Parent=Msa1191610-mRNA-1 |
| chr8_1 | exon | 36323876 | 36324119 | 36323876 | ID=Msa1191610-mRNA-1:exon:11979;Parent=Msa1191610-mRNA-1 |
| chr8_1 | exon | 36324449 | 36324628 | 36324449 | ID=Msa1191610-mRNA-1:exon:11980;Parent=Msa1191610-mRNA-1 |
| chr8_1 | exon | 36324943 | 36325372 | 36324943 | ID=Msa1191610-mRNA-1:exon:11981;Parent=Msa1191610-mRNA-1 |
| chr8_1 | CDS | 36323474 | 36323772 | 36323474 | ID=Msa1191610-mRNA-1:cds;Parent=Msa1191610-mRNA-1 |
| chr8_1 | CDS | 36323876 | 36324119 | 36323876 | ID=Msa1191610-mRNA-1:cds;Parent=Msa1191610-mRNA-1 |
| chr8_1 | CDS | 36324449 | 36324628 | 36324449 | ID=Msa1191610-mRNA-1:cds;Parent=Msa1191610-mRNA-1 |
| chr8_1 | CDS | 36324943 | 36325167 | 36324943 | ID=Msa1191610-mRNA-1:cds;Parent=Msa1191610-mRNA-1 |
| chr8_1 | three_prime_UTR | 36325168 | 36325372 | 36325168 | ID=Msa1191610-mRNA-1:three_prime_utr;Parent=Msa1191610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
