Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191630 | sp|E7C196|MER_ERYCB | 61.111 | 324 | 119 | 1 | 4 | 320 | 3 | 326 | 3.28e-139 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191630 | G7JL33 | 94.081 | 321 | 19 | 0 | 1 | 321 | 1 | 321 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0606450 | Msa1191630 | 0.841200 | 5.490233e-58 | -8.615850e-47 |
| Msa0184150 | Msa1191630 | 0.835317 | 1.800082e-56 | -8.615850e-47 |
| Msa0374040 | Msa1191630 | 0.826652 | 2.412252e-54 | -8.615850e-47 |
| Msa0409500 | Msa1191630 | 0.824946 | 6.127068e-54 | -8.615850e-47 |
| Msa0409530 | Msa1191630 | 0.822011 | 2.975914e-53 | -8.615850e-47 |
| Msa0410560 | Msa1191630 | 0.802890 | 4.525681e-49 | -8.615850e-47 |
| Msa0464310 | Msa1191630 | 0.801023 | 1.094608e-48 | -8.615850e-47 |
| Msa1022490 | Msa1191630 | 0.821456 | 3.998765e-53 | -8.615850e-47 |
| Msa1022510 | Msa1191630 | 0.828229 | 1.009584e-54 | -8.615850e-47 |
| Msa1037310 | Msa1191630 | 0.811199 | 7.890619e-51 | -8.615850e-47 |
| Msa1061670 | Msa1191630 | 0.805785 | 1.128828e-49 | -8.615850e-47 |
| Msa1063210 | Msa1191630 | 0.807658 | 4.539334e-50 | -8.615850e-47 |
| Msa1106680 | Msa1191630 | 0.836621 | 8.405419e-57 | -8.615850e-47 |
| Msa1106960 | Msa1191630 | 0.800540 | 1.373629e-48 | -8.615850e-47 |
| Msa0240990 | Msa1191630 | 0.805561 | 1.257912e-49 | -8.615850e-47 |
| Msa0328090 | Msa1191630 | 0.822479 | 2.317931e-53 | -8.615850e-47 |
| Msa1170340 | Msa1191630 | 0.827802 | 1.279456e-54 | -8.615850e-47 |
| Msa1181090 | Msa1191630 | 0.806452 | 8.170681e-50 | -8.615850e-47 |
| Msa1191610 | Msa1191630 | 0.825042 | 5.815422e-54 | -8.615850e-47 |
| Msa1191630 | Msa1238250 | 0.803535 | 3.328245e-49 | -8.615850e-47 |
| Msa1191630 | Msa1267990 | 0.801428 | 9.046041e-49 | -8.615850e-47 |
| Msa1191630 | Msa1319030 | 0.800122 | 1.671437e-48 | -8.615850e-47 |
| Msa1191630 | Msa1319190 | 0.801432 | 9.028058e-49 | -8.615850e-47 |
| Msa1191630 | Msa1321970 | 0.800715 | 1.265384e-48 | -8.615850e-47 |
| Msa1191630 | Msa1355340 | 0.807573 | 4.732263e-50 | -8.615850e-47 |
| Msa1191630 | Msa1406840 | 0.804788 | 1.826120e-49 | -8.615850e-47 |
| Msa0490060 | Msa1191630 | 0.806622 | 7.521167e-50 | -8.615850e-47 |
| Msa0502940 | Msa1191630 | 0.810879 | 9.256521e-51 | -8.615850e-47 |
| Msa0507600 | Msa1191630 | 0.801393 | 9.198722e-49 | -8.615850e-47 |
| Msa0591490 | Msa1191630 | 0.806579 | 7.680707e-50 | -8.615850e-47 |
| Msa0863840 | Msa1191630 | 0.804348 | 2.255957e-49 | -8.615850e-47 |
| Msa0863850 | Msa1191630 | 0.800937 | 1.139918e-48 | -8.615850e-47 |
| Msa0896910 | Msa1191630 | 0.802724 | 4.897560e-49 | -8.615850e-47 |
| Msa0896920 | Msa1191630 | 0.812512 | 4.083977e-51 | -8.615850e-47 |
| Msa0898830 | Msa1191630 | -0.809868 | 1.529579e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191630 | MtrunA17_Chr6g0480021 | 77.882 | 321 | 53 | 1 | 1 | 321 | 1 | 303 | 0.0 | 512 |
| Msa1191630 | MtrunA17_Chr6g0480011 | 66.044 | 321 | 108 | 1 | 1 | 320 | 1 | 321 | 4.25e-161 | 452 |
| Msa1191630 | MtrunA17_Chr6g0479981 | 61.950 | 318 | 120 | 1 | 1 | 318 | 1 | 317 | 9.31e-153 | 431 |
| Msa1191630 | MtrunA17_Chr4g0036261 | 89.560 | 182 | 19 | 0 | 139 | 320 | 2 | 183 | 5.58e-119 | 340 |
| Msa1191630 | MtrunA17_Chr1g0173621 | 52.632 | 323 | 142 | 2 | 1 | 320 | 1 | 315 | 7.14e-119 | 345 |
| Msa1191630 | MtrunA17_Chr4g0036301 | 94.186 | 172 | 10 | 0 | 150 | 321 | 1 | 172 | 4.29e-118 | 337 |
| Msa1191630 | MtrunA17_Chr4g0036321 | 90.643 | 171 | 16 | 0 | 150 | 320 | 1 | 171 | 1.27e-111 | 321 |
| Msa1191630 | MtrunA17_Chr3g0121001 | 48.910 | 321 | 148 | 6 | 3 | 318 | 4 | 313 | 6.40e-104 | 306 |
| Msa1191630 | MtrunA17_Chr4g0018921 | 47.484 | 318 | 160 | 6 | 5 | 320 | 2 | 314 | 1.44e-94 | 283 |
| Msa1191630 | MtrunA17_Chr5g0447941 | 48.758 | 322 | 150 | 6 | 1 | 318 | 1 | 311 | 2.64e-91 | 275 |
| Msa1191630 | MtrunA17_Chr5g0447951 | 50.166 | 301 | 144 | 4 | 1 | 298 | 1 | 298 | 4.86e-91 | 274 |
| Msa1191630 | MtrunA17_Chr5g0447961 | 50.166 | 301 | 144 | 4 | 1 | 298 | 1 | 298 | 4.86e-91 | 274 |
| Msa1191630 | MtrunA17_Chr8g0368921 | 45.687 | 313 | 163 | 5 | 11 | 320 | 10 | 318 | 9.51e-89 | 268 |
| Msa1191630 | MtrunA17_Chr8g0368931 | 43.125 | 320 | 173 | 5 | 3 | 320 | 2 | 314 | 1.82e-83 | 254 |
| Msa1191630 | MtrunA17_Chr4g0009531 | 44.164 | 317 | 156 | 7 | 11 | 320 | 10 | 312 | 3.46e-79 | 243 |
| Msa1191630 | MtrunA17_Chr7g0239701 | 45.016 | 311 | 163 | 6 | 11 | 320 | 14 | 317 | 6.49e-79 | 243 |
| Msa1191630 | MtrunA17_Chr4g0009581 | 45.307 | 309 | 151 | 7 | 11 | 318 | 11 | 302 | 4.25e-72 | 225 |
| Msa1191630 | MtrunA17_Chr4g0036291 | 94.340 | 106 | 6 | 0 | 1 | 106 | 1 | 106 | 2.22e-69 | 211 |
| Msa1191630 | MtrunA17_Chr4g0036311 | 92.453 | 106 | 8 | 0 | 1 | 106 | 1 | 106 | 2.10e-68 | 209 |
| Msa1191630 | MtrunA17_Chr7g0243551 | 40.283 | 283 | 160 | 4 | 11 | 293 | 17 | 290 | 5.92e-63 | 201 |
| Msa1191630 | MtrunA17_Chr4g0036051 | 39.527 | 296 | 163 | 6 | 9 | 294 | 3 | 292 | 6.27e-61 | 196 |
| Msa1191630 | MtrunA17_Chr4g0036251 | 80.374 | 107 | 15 | 2 | 1 | 107 | 1 | 101 | 4.01e-56 | 177 |
| Msa1191630 | MtrunA17_Chr4g0009621 | 45.643 | 241 | 117 | 4 | 81 | 320 | 1 | 228 | 1.53e-53 | 175 |
| Msa1191630 | MtrunA17_Chr6g0479811 | 61.947 | 113 | 43 | 0 | 190 | 302 | 1 | 113 | 8.80e-47 | 154 |
| Msa1191630 | MtrunA17_Chr6g0479791 | 82.759 | 87 | 13 | 1 | 237 | 321 | 18 | 104 | 8.12e-45 | 148 |
| Msa1191630 | MtrunA17_Chr6g0479801 | 81.250 | 48 | 9 | 0 | 105 | 152 | 38 | 85 | 2.06e-22 | 89.4 |
| Msa1191630 | MtrunA17_Chr3g0127491 | 24.662 | 296 | 170 | 9 | 35 | 294 | 72 | 350 | 3.37e-16 | 78.6 |
| Msa1191630 | MtrunA17_Chr3g0095421 | 25.175 | 286 | 162 | 9 | 42 | 292 | 83 | 351 | 4.57e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191630 | AT1G59960.1 | 49.231 | 325 | 160 | 2 | 1 | 320 | 1 | 325 | 4.39e-120 | 348 |
| Msa1191630 | AT1G59950.1 | 50.492 | 305 | 150 | 1 | 17 | 320 | 15 | 319 | 2.99e-109 | 321 |
| Msa1191630 | AT2G37790.1 | 48.077 | 312 | 152 | 5 | 11 | 320 | 10 | 313 | 1.44e-95 | 286 |
| Msa1191630 | AT2G37770.2 | 47.500 | 320 | 159 | 5 | 3 | 320 | 2 | 314 | 9.38e-95 | 284 |
| Msa1191630 | AT5G62420.1 | 46.006 | 313 | 161 | 7 | 11 | 320 | 8 | 315 | 8.51e-90 | 271 |
| Msa1191630 | AT3G53880.1 | 46.302 | 311 | 160 | 5 | 11 | 320 | 10 | 314 | 1.48e-87 | 265 |
| Msa1191630 | AT2G37760.2 | 43.730 | 311 | 164 | 4 | 11 | 320 | 10 | 310 | 2.67e-83 | 254 |
| Msa1191630 | AT2G37760.1 | 43.730 | 311 | 164 | 4 | 11 | 320 | 10 | 310 | 2.67e-83 | 254 |
| Msa1191630 | AT5G01670.1 | 41.667 | 312 | 168 | 8 | 11 | 318 | 18 | 319 | 1.74e-78 | 242 |
| Msa1191630 | AT2G37760.4 | 43.750 | 288 | 152 | 3 | 11 | 298 | 10 | 287 | 4.69e-77 | 238 |
| Msa1191630 | AT2G37760.3 | 43.750 | 288 | 152 | 3 | 11 | 298 | 10 | 287 | 4.69e-77 | 238 |
| Msa1191630 | AT2G37760.5 | 44.056 | 286 | 150 | 3 | 11 | 296 | 10 | 285 | 8.14e-77 | 237 |
| Msa1191630 | AT3G53880.2 | 45.775 | 284 | 148 | 4 | 11 | 294 | 10 | 287 | 1.32e-76 | 237 |
| Msa1191630 | AT5G01670.2 | 38.348 | 339 | 168 | 9 | 11 | 318 | 18 | 346 | 1.41e-72 | 228 |
| Msa1191630 | AT2G37760.6 | 44.615 | 260 | 140 | 3 | 62 | 320 | 8 | 264 | 1.60e-68 | 215 |
| Msa1191630 | AT2G37760.7 | 44.615 | 260 | 140 | 3 | 62 | 320 | 8 | 264 | 1.60e-68 | 215 |
| Msa1191630 | AT2G21260.1 | 38.384 | 297 | 167 | 6 | 8 | 294 | 2 | 292 | 3.01e-67 | 213 |
| Msa1191630 | AT2G21250.1 | 37.710 | 297 | 169 | 6 | 8 | 294 | 2 | 292 | 7.59e-66 | 209 |
| Msa1191630 | AT2G37770.1 | 50.000 | 210 | 97 | 4 | 3 | 211 | 2 | 204 | 5.33e-62 | 199 |
| Msa1191630 | AT2G21250.2 | 38.235 | 238 | 131 | 6 | 8 | 235 | 2 | 233 | 8.74e-49 | 163 |
| Msa1191630 | AT2G21260.2 | 35.160 | 219 | 130 | 4 | 86 | 294 | 8 | 224 | 1.21e-42 | 147 |
| Msa1191630 | AT1G60750.1 | 26.829 | 328 | 186 | 14 | 13 | 314 | 21 | 320 | 6.49e-13 | 68.9 |
| Msa1191630 | AT5G53580.1 | 22.857 | 280 | 163 | 9 | 42 | 285 | 80 | 342 | 1.22e-12 | 68.2 |
| Msa1191630 | AT1G60690.1 | 22.781 | 338 | 199 | 12 | 13 | 312 | 20 | 333 | 8.42e-11 | 62.8 |
Find 78 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTCCTCACCTCAATTT+TGG | 0.184617 | 8_1:+36347656 | Msa1191630:CDS |
| ATTAACAGCAGGAGAGATTT+TGG | 0.226195 | 8_1:-36348200 | None:intergenic |
| ACGTCTTGTTTCAACCTTAC+TGG | 0.266387 | 8_1:-36348025 | None:intergenic |
| GTTGAAGGCCATAACTTTAA+AGG | 0.283083 | 8_1:+36348046 | Msa1191630:CDS |
| TTTGGCACTTTCTAAGAGTA+TGG | 0.298384 | 8_1:-36348182 | None:intergenic |
| TTGGTTGATGCCATTGAAAT+AGG | 0.299974 | 8_1:+36347675 | Msa1191630:CDS |
| AATATGCCAATGATAGGTTT+TGG | 0.303449 | 8_1:+36347606 | Msa1191630:CDS |
| TATCCTCACCTTTAAAGTTA+TGG | 0.331649 | 8_1:-36348054 | None:intergenic |
| CAATGGGAATTGCCCCTTGC+TGG | 0.340720 | 8_1:-36348997 | None:intergenic |
| TATGGAAGATTGTTATAGAT+TGG | 0.350814 | 8_1:+36348111 | Msa1191630:CDS |
| AATCTCTCCTGCTGTTAATC+AGG | 0.358117 | 8_1:+36348204 | Msa1191630:CDS |
| AAAACATTGAAATATTTGAT+TGG | 0.366649 | 8_1:+36349050 | Msa1191630:CDS |
| GAAATGTTTGTATCTGATAA+TGG | 0.381759 | 8_1:+36349136 | Msa1191630:CDS |
| TGTTCATTACTTCCAAGTTA+TGG | 0.391308 | 8_1:+36347802 | Msa1191630:CDS |
| TGACACCAATAGACTTTACT+AGG | 0.395537 | 8_1:-36348135 | None:intergenic |
| CCAGAGGTGATACTAAATTC+AGG | 0.400690 | 8_1:+36347579 | Msa1191630:CDS |
| AGGAGGGTACAAATTAAGTT+GGG | 0.402335 | 8_1:+36348582 | Msa1191630:CDS |
| AAACATTGAAATATTTGATT+GGG | 0.403714 | 8_1:+36349051 | Msa1191630:CDS |
| TGGATCTCTATTTGATTCAC+TGG | 0.404097 | 8_1:+36348002 | Msa1191630:CDS |
| TCTATTGGTGTCAGCAACTT+TGG | 0.413475 | 8_1:+36348145 | Msa1191630:CDS |
| GATGTTCCAAAACCTATCAT+TGG | 0.419966 | 8_1:-36347612 | None:intergenic |
| ATGGAAGATTGTTATAGATT+GGG | 0.428752 | 8_1:+36348112 | Msa1191630:CDS |
| CTATAATACTGAAGAACCTC+TGG | 0.433603 | 8_1:+36347725 | Msa1191630:CDS |
| ATTTGATTCACTGGCCAGTA+AGG | 0.449094 | 8_1:+36348011 | Msa1191630:CDS |
| AGTTTCCTCTGATGCCATGA+TGG | 0.455334 | 8_1:-36348508 | None:intergenic |
| TAATGGACCTTACAAGTCAT+TGG | 0.455554 | 8_1:+36349153 | Msa1191630:CDS |
| AAATCTTGAATTGGAGTATG+TGG | 0.465434 | 8_1:+36347982 | Msa1191630:CDS |
| CCTGAATTTAGTATCACCTC+TGG | 0.467537 | 8_1:-36347579 | None:intergenic |
| TCCTCAATGCAGACTGCTAA+AGG | 0.470577 | 8_1:+36349111 | Msa1191630:CDS |
| TTGTTGAAGCTCTTCACAAT+GGG | 0.474196 | 8_1:-36349013 | None:intergenic |
| TAGAAAGAAGAGTGTAGCCC+AGG | 0.476626 | 8_1:+36348654 | Msa1191630:CDS |
| AAAAGGAACATGGGAAGCTA+TGG | 0.478713 | 8_1:+36348093 | Msa1191630:CDS |
| GTTTCCTCTGATGCCATGAT+GGG | 0.489448 | 8_1:-36348507 | None:intergenic |
| AATGGCATCAACCAAAATTG+AGG | 0.495834 | 8_1:-36347667 | None:intergenic |
| TTGGGCCTAGTAAAGTCTAT+TGG | 0.496646 | 8_1:+36348130 | Msa1191630:CDS |
| TTGGGGTTCGCCTGCAGTGA+TGG | 0.500062 | 8_1:+36348600 | Msa1191630:CDS |
| AGCATCAGTACACCATAACT+TGG | 0.506431 | 8_1:-36347814 | None:intergenic |
| ATCGAATTCTCCATCACTGC+AGG | 0.507726 | 8_1:-36348610 | None:intergenic |
| TAGGAGGGTACAAATTAAGT+TGG | 0.509205 | 8_1:+36348581 | Msa1191630:CDS |
| CAGAGGTGATACTAAATTCA+GGG | 0.521393 | 8_1:+36347580 | Msa1191630:CDS |
| TTATACAGATAGCACTAAGA+TGG | 0.527906 | 8_1:+36348969 | Msa1191630:intron |
| GTGTCAAAAGCTTTAGAGCT+AGG | 0.527948 | 8_1:+36347756 | Msa1191630:CDS |
| CAAGTCATTGGAAGAGCTGT+GGG | 0.528282 | 8_1:+36349165 | Msa1191630:CDS |
| AGCTCTTCCAATGACTTGTA+AGG | 0.535075 | 8_1:-36349160 | None:intergenic |
| GCCTTTAGCAGTCTGCATTG+AGG | 0.539010 | 8_1:-36349112 | None:intergenic |
| ATGCCTGTAGCCTATTTCAA+TGG | 0.544065 | 8_1:-36347685 | None:intergenic |
| TGAACCCATCATGGCATCAG+AGG | 0.544247 | 8_1:+36348503 | Msa1191630:CDS |
| AGGACTTCATGTGGTGGAGA+GGG | 0.544889 | 8_1:-36347642 | None:intergenic |
| ATGCCATTGAAATAGGCTAC+AGG | 0.548301 | 8_1:+36347682 | Msa1191630:CDS |
| CTTGTTGAAGCTCTTCACAA+TGG | 0.556325 | 8_1:-36349014 | None:intergenic |
| AGAGAATTCTGCAAGCAGAA+AGG | 0.561027 | 8_1:+36348532 | Msa1191630:CDS |
| TCATATACCTGATTAACAGC+AGG | 0.569876 | 8_1:-36348211 | None:intergenic |
| AAATTATGCTTGCTTGAGAG+TGG | 0.578049 | 8_1:-36347868 | None:intergenic |
| TAAGATGGATATACCAGCAA+GGG | 0.578343 | 8_1:+36348984 | Msa1191630:CDS |
| AGGTGGAAATGAACCCATCA+TGG | 0.580827 | 8_1:+36348494 | Msa1191630:intron |
| GTGAGTGCATGGTCACCACT+AGG | 0.581102 | 8_1:+36348562 | Msa1191630:CDS |
| AAGGAATCCATGTGAGTGCA+TGG | 0.586898 | 8_1:+36348551 | Msa1191630:CDS |
| ACAAGTCATTGGAAGAGCTG+TGG | 0.592554 | 8_1:+36349164 | Msa1191630:CDS |
| GAGGACTTCATGTGGTGGAG+AGG | 0.593214 | 8_1:-36347643 | None:intergenic |
| AGGCCATAACTTTAAAGGTG+AGG | 0.603244 | 8_1:+36348051 | Msa1191630:CDS |
| CTTAATTTGTACCCTCCTAG+TGG | 0.609536 | 8_1:-36348577 | None:intergenic |
| CATTGTGAAGAGCTTCAACA+AGG | 0.610965 | 8_1:+36349015 | Msa1191630:CDS |
| GTGGTGACCATGCACTCACA+TGG | 0.614668 | 8_1:-36348558 | None:intergenic |
| GGAGGGTACAAATTAAGTTG+GGG | 0.626343 | 8_1:+36348583 | Msa1191630:CDS |
| AGGTTGAAACAAGACGTTGA+AGG | 0.628014 | 8_1:+36348031 | Msa1191630:CDS |
| TGAAGAGCTTCAACAAGGAG+AGG | 0.630692 | 8_1:+36349020 | Msa1191630:CDS |
| TCATTGGAAGAGCTGTGGGA+TGG | 0.633458 | 8_1:+36349169 | Msa1191630:CDS |
| TTTGACACAGCTTGGCCCAG+AGG | 0.635347 | 8_1:-36347741 | None:intergenic |
| TATAATACTGAAGAACCTCT+GGG | 0.636374 | 8_1:+36347726 | Msa1191630:CDS |
| GATTCTGCGCAAAATTGCTG+AGG | 0.639021 | 8_1:+36348630 | Msa1191630:CDS |
| AGTGCATGGTCACCACTAGG+AGG | 0.651978 | 8_1:+36348565 | Msa1191630:CDS |
| GGAAACAAACAAAGTTCCAG+AGG | 0.669203 | 8_1:+36347563 | Msa1191630:CDS |
| CTAAGATGGATATACCAGCA+AGG | 0.682956 | 8_1:+36348983 | Msa1191630:CDS |
| CATCAACCAAAATTGAGGTG+AGG | 0.683706 | 8_1:-36347662 | None:intergenic |
| GTGCATGGTCACCACTAGGA+GGG | 0.685225 | 8_1:+36348566 | Msa1191630:CDS |
| AAGATGGATATACCAGCAAG+GGG | 0.693926 | 8_1:+36348985 | Msa1191630:CDS |
| GAGGTGAGGACTTCATGTGG+TGG | 0.731533 | 8_1:-36347648 | None:intergenic |
| ATTGAGGTGAGGACTTCATG+TGG | 0.753402 | 8_1:-36347651 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTTGAATTATAAAAT+AGG | - | chr8_1:36348774-36348793 | None:intergenic | 10.0% |
| !! | AAAAACTTGAATTATAAAAT+AGG | - | chr8_1:36348774-36348793 | None:intergenic | 10.0% |
| !!! | TATTATTGTTTTGGTTTTTT+TGG | + | chr8_1:36347944-36347963 | Msa1191630:intron | 15.0% |
| !!! | ATTTTTTAGAAATCTTGAAT+TGG | + | chr8_1:36347973-36347992 | Msa1191630:intron | 15.0% |
| !! | AACTTCATTAAAATCTTAAT+TGG | - | chr8_1:36348737-36348756 | None:intergenic | 15.0% |
| !! | AAAACATTGAAATATTTGAT+TGG | + | chr8_1:36349050-36349069 | Msa1191630:CDS | 15.0% |
| !! | AAACATTGAAATATTTGATT+GGG | + | chr8_1:36349051-36349070 | Msa1191630:CDS | 15.0% |
| !!! | TATTATTGTTTTGGTTTTTT+TGG | + | chr8_1:36347944-36347963 | Msa1191630:intron | 15.0% |
| !!! | ATTTTTTAGAAATCTTGAAT+TGG | + | chr8_1:36347973-36347992 | Msa1191630:intron | 15.0% |
| !! | AACTTCATTAAAATCTTAAT+TGG | - | chr8_1:36348737-36348756 | None:intergenic | 15.0% |
| !! | AAAACATTGAAATATTTGAT+TGG | + | chr8_1:36349050-36349069 | Msa1191630:CDS | 15.0% |
| !! | AAACATTGAAATATTTGATT+GGG | + | chr8_1:36349051-36349070 | Msa1191630:CDS | 15.0% |
| !! | ACTTAAAAGAAGTAGAAAAA+AGG | - | chr8_1:36347900-36347919 | None:intergenic | 20.0% |
| !!! | CTTGTCTAATATTATTGTTT+TGG | + | chr8_1:36347935-36347954 | Msa1191630:intron | 20.0% |
| !!! | ACAATTCCTTTTGATATAAA+AGG | + | chr8_1:36348076-36348095 | Msa1191630:CDS | 20.0% |
| !!! | TTTTGATATAAAAGGAACAT+GGG | + | chr8_1:36348084-36348103 | Msa1191630:CDS | 20.0% |
| !!! | TATTGGATACTATAAGTTTT+GGG | - | chr8_1:36348318-36348337 | None:intergenic | 20.0% |
| !!! | TTATTGGATACTATAAGTTT+TGG | - | chr8_1:36348319-36348338 | None:intergenic | 20.0% |
| !!! | CATCATACAAATTCTTATTT+GGG | + | chr8_1:36348468-36348487 | Msa1191630:intron | 20.0% |
| !!! | TAATTCAAGTTTTTTTTCCA+TGG | + | chr8_1:36348780-36348799 | Msa1191630:intron | 20.0% |
| !!! | TAATTTTGTCTAATTCTTCT+TGG | - | chr8_1:36349084-36349103 | None:intergenic | 20.0% |
| !! | ACTTAAAAGAAGTAGAAAAA+AGG | - | chr8_1:36347900-36347919 | None:intergenic | 20.0% |
| !!! | CTTGTCTAATATTATTGTTT+TGG | + | chr8_1:36347935-36347954 | Msa1191630:intron | 20.0% |
| !!! | ACAATTCCTTTTGATATAAA+AGG | + | chr8_1:36348076-36348095 | Msa1191630:CDS | 20.0% |
| !!! | TTTTGATATAAAAGGAACAT+GGG | + | chr8_1:36348084-36348103 | Msa1191630:CDS | 20.0% |
| !!! | TATTGGATACTATAAGTTTT+GGG | - | chr8_1:36348318-36348337 | None:intergenic | 20.0% |
| !!! | TTATTGGATACTATAAGTTT+TGG | - | chr8_1:36348319-36348338 | None:intergenic | 20.0% |
| !!! | CATCATACAAATTCTTATTT+GGG | + | chr8_1:36348468-36348487 | Msa1191630:intron | 20.0% |
| !!! | TAATTCAAGTTTTTTTTCCA+TGG | + | chr8_1:36348780-36348799 | Msa1191630:intron | 20.0% |
| !!! | TAATTTTGTCTAATTCTTCT+TGG | - | chr8_1:36349084-36349103 | None:intergenic | 20.0% |
| !! | CATGTTCCTTTTATATCAAA+AGG | - | chr8_1:36348085-36348104 | None:intergenic | 25.0% |
| !! | CTTTTGATATAAAAGGAACA+TGG | + | chr8_1:36348083-36348102 | Msa1191630:CDS | 25.0% |
| ! | TATGGAAGATTGTTATAGAT+TGG | + | chr8_1:36348111-36348130 | Msa1191630:CDS | 25.0% |
| ! | ATGGAAGATTGTTATAGATT+GGG | + | chr8_1:36348112-36348131 | Msa1191630:CDS | 25.0% |
| ! | GCATCATACAAATTCTTATT+TGG | + | chr8_1:36348467-36348486 | Msa1191630:intron | 25.0% |
| !! | ACAAATTCTTATTTGGGTTT+AGG | + | chr8_1:36348474-36348493 | Msa1191630:intron | 25.0% |
| ! | AATCTTAATTGGCTAAACAT+AGG | - | chr8_1:36348726-36348745 | None:intergenic | 25.0% |
| ! | TTGTTTCACATAACAATCTA+AGG | - | chr8_1:36348852-36348871 | None:intergenic | 25.0% |
| ! | GAAATGTTTGTATCTGATAA+TGG | + | chr8_1:36349136-36349155 | Msa1191630:CDS | 25.0% |
| !! | CATGTTCCTTTTATATCAAA+AGG | - | chr8_1:36348085-36348104 | None:intergenic | 25.0% |
| !! | CTTTTGATATAAAAGGAACA+TGG | + | chr8_1:36348083-36348102 | Msa1191630:CDS | 25.0% |
| ! | TATGGAAGATTGTTATAGAT+TGG | + | chr8_1:36348111-36348130 | Msa1191630:CDS | 25.0% |
| ! | ATGGAAGATTGTTATAGATT+GGG | + | chr8_1:36348112-36348131 | Msa1191630:CDS | 25.0% |
| ! | GCATCATACAAATTCTTATT+TGG | + | chr8_1:36348467-36348486 | Msa1191630:intron | 25.0% |
| !! | ACAAATTCTTATTTGGGTTT+AGG | + | chr8_1:36348474-36348493 | Msa1191630:intron | 25.0% |
| ! | AATCTTAATTGGCTAAACAT+AGG | - | chr8_1:36348726-36348745 | None:intergenic | 25.0% |
| ! | TTGTTTCACATAACAATCTA+AGG | - | chr8_1:36348852-36348871 | None:intergenic | 25.0% |
| ! | GAAATGTTTGTATCTGATAA+TGG | + | chr8_1:36349136-36349155 | Msa1191630:CDS | 25.0% |
| ! | AATATGCCAATGATAGGTTT+TGG | + | chr8_1:36347606-36347625 | Msa1191630:CDS | 30.0% |
| TATAATACTGAAGAACCTCT+GGG | + | chr8_1:36347726-36347745 | Msa1191630:CDS | 30.0% | |
| TGTTCATTACTTCCAAGTTA+TGG | + | chr8_1:36347802-36347821 | Msa1191630:CDS | 30.0% | |
| AAATCTTGAATTGGAGTATG+TGG | + | chr8_1:36347982-36348001 | Msa1191630:CDS | 30.0% | |
| !! | TATCCTCACCTTTAAAGTTA+TGG | - | chr8_1:36348057-36348076 | None:intergenic | 30.0% |
| ! | ATGTATTTGTGAAGTATCAC+TGG | - | chr8_1:36348370-36348389 | None:intergenic | 30.0% |
| ! | AATTCTTATTTGGGTTTAGG+TGG | + | chr8_1:36348477-36348496 | Msa1191630:intron | 30.0% |
| TAAAATAATCAACTGCACCT+GGG | - | chr8_1:36348674-36348693 | None:intergenic | 30.0% | |
| ATAAAATAATCAACTGCACC+TGG | - | chr8_1:36348675-36348694 | None:intergenic | 30.0% | |
| TAACAGTAATCTCAATACAG+TGG | - | chr8_1:36348917-36348936 | None:intergenic | 30.0% | |
| TTATACAGATAGCACTAAGA+TGG | + | chr8_1:36348969-36348988 | Msa1191630:intron | 30.0% | |
| ! | AATATGCCAATGATAGGTTT+TGG | + | chr8_1:36347606-36347625 | Msa1191630:CDS | 30.0% |
| TATAATACTGAAGAACCTCT+GGG | + | chr8_1:36347726-36347745 | Msa1191630:CDS | 30.0% | |
| TGTTCATTACTTCCAAGTTA+TGG | + | chr8_1:36347802-36347821 | Msa1191630:CDS | 30.0% | |
| AAATCTTGAATTGGAGTATG+TGG | + | chr8_1:36347982-36348001 | Msa1191630:CDS | 30.0% | |
| !! | TATCCTCACCTTTAAAGTTA+TGG | - | chr8_1:36348057-36348076 | None:intergenic | 30.0% |
| ! | ATGTATTTGTGAAGTATCAC+TGG | - | chr8_1:36348370-36348389 | None:intergenic | 30.0% |
| ! | AATTCTTATTTGGGTTTAGG+TGG | + | chr8_1:36348477-36348496 | Msa1191630:intron | 30.0% |
| TAAAATAATCAACTGCACCT+GGG | - | chr8_1:36348674-36348693 | None:intergenic | 30.0% | |
| ATAAAATAATCAACTGCACC+TGG | - | chr8_1:36348675-36348694 | None:intergenic | 30.0% | |
| TAACAGTAATCTCAATACAG+TGG | - | chr8_1:36348917-36348936 | None:intergenic | 30.0% | |
| TTATACAGATAGCACTAAGA+TGG | + | chr8_1:36348969-36348988 | Msa1191630:intron | 30.0% | |
| CAGAGGTGATACTAAATTCA+GGG | + | chr8_1:36347580-36347599 | Msa1191630:CDS | 35.0% | |
| GGGAAAAATATGCCAATGAT+AGG | + | chr8_1:36347600-36347619 | Msa1191630:CDS | 35.0% | |
| GATGTTCCAAAACCTATCAT+TGG | - | chr8_1:36347615-36347634 | None:intergenic | 35.0% | |
| AATGGCATCAACCAAAATTG+AGG | - | chr8_1:36347670-36347689 | None:intergenic | 35.0% | |
| ! | TTGGTTGATGCCATTGAAAT+AGG | + | chr8_1:36347675-36347694 | Msa1191630:CDS | 35.0% |
| CTATAATACTGAAGAACCTC+TGG | + | chr8_1:36347725-36347744 | Msa1191630:CDS | 35.0% | |
| ! | GTTCATCACGATTTTTAACG+AGG | - | chr8_1:36347782-36347801 | None:intergenic | 35.0% |
| AAATTATGCTTGCTTGAGAG+TGG | - | chr8_1:36347871-36347890 | None:intergenic | 35.0% | |
| TGGATCTCTATTTGATTCAC+TGG | + | chr8_1:36348002-36348021 | Msa1191630:CDS | 35.0% | |
| GTTGAAGGCCATAACTTTAA+AGG | + | chr8_1:36348046-36348065 | Msa1191630:CDS | 35.0% | |
| TGACACCAATAGACTTTACT+AGG | - | chr8_1:36348138-36348157 | None:intergenic | 35.0% | |
| ! | TTTGGCACTTTCTAAGAGTA+TGG | - | chr8_1:36348185-36348204 | None:intergenic | 35.0% |
| ! | ATTAACAGCAGGAGAGATTT+TGG | - | chr8_1:36348203-36348222 | None:intergenic | 35.0% |
| TCATATACCTGATTAACAGC+AGG | - | chr8_1:36348214-36348233 | None:intergenic | 35.0% | |
| CTGCATCAGTTACTTCAAAA+TGG | + | chr8_1:36348261-36348280 | Msa1191630:intron | 35.0% | |
| ! | TAGGAGGGTACAAATTAAGT+TGG | + | chr8_1:36348581-36348600 | Msa1191630:CDS | 35.0% |
| ! | AGGAGGGTACAAATTAAGTT+GGG | + | chr8_1:36348582-36348601 | Msa1191630:CDS | 35.0% |
| TAAGATGGATATACCAGCAA+GGG | + | chr8_1:36348984-36349003 | Msa1191630:CDS | 35.0% | |
| TTGTTGAAGCTCTTCACAAT+GGG | - | chr8_1:36349016-36349035 | None:intergenic | 35.0% | |
| ! | TAATGGACCTTACAAGTCAT+TGG | + | chr8_1:36349153-36349172 | Msa1191630:CDS | 35.0% |
| CAGAGGTGATACTAAATTCA+GGG | + | chr8_1:36347580-36347599 | Msa1191630:CDS | 35.0% | |
| GGGAAAAATATGCCAATGAT+AGG | + | chr8_1:36347600-36347619 | Msa1191630:CDS | 35.0% | |
| GATGTTCCAAAACCTATCAT+TGG | - | chr8_1:36347615-36347634 | None:intergenic | 35.0% | |
| AATGGCATCAACCAAAATTG+AGG | - | chr8_1:36347670-36347689 | None:intergenic | 35.0% | |
| ! | TTGGTTGATGCCATTGAAAT+AGG | + | chr8_1:36347675-36347694 | Msa1191630:CDS | 35.0% |
| CTATAATACTGAAGAACCTC+TGG | + | chr8_1:36347725-36347744 | Msa1191630:CDS | 35.0% | |
| ! | GTTCATCACGATTTTTAACG+AGG | - | chr8_1:36347782-36347801 | None:intergenic | 35.0% |
| AAATTATGCTTGCTTGAGAG+TGG | - | chr8_1:36347871-36347890 | None:intergenic | 35.0% | |
| TGGATCTCTATTTGATTCAC+TGG | + | chr8_1:36348002-36348021 | Msa1191630:CDS | 35.0% | |
| GTTGAAGGCCATAACTTTAA+AGG | + | chr8_1:36348046-36348065 | Msa1191630:CDS | 35.0% | |
| TGACACCAATAGACTTTACT+AGG | - | chr8_1:36348138-36348157 | None:intergenic | 35.0% | |
| ! | TTTGGCACTTTCTAAGAGTA+TGG | - | chr8_1:36348185-36348204 | None:intergenic | 35.0% |
| ! | ATTAACAGCAGGAGAGATTT+TGG | - | chr8_1:36348203-36348222 | None:intergenic | 35.0% |
| TCATATACCTGATTAACAGC+AGG | - | chr8_1:36348214-36348233 | None:intergenic | 35.0% | |
| CTGCATCAGTTACTTCAAAA+TGG | + | chr8_1:36348261-36348280 | Msa1191630:intron | 35.0% | |
| ! | TAGGAGGGTACAAATTAAGT+TGG | + | chr8_1:36348581-36348600 | Msa1191630:CDS | 35.0% |
| ! | AGGAGGGTACAAATTAAGTT+GGG | + | chr8_1:36348582-36348601 | Msa1191630:CDS | 35.0% |
| TAAGATGGATATACCAGCAA+GGG | + | chr8_1:36348984-36349003 | Msa1191630:CDS | 35.0% | |
| TTGTTGAAGCTCTTCACAAT+GGG | - | chr8_1:36349016-36349035 | None:intergenic | 35.0% | |
| ! | TAATGGACCTTACAAGTCAT+TGG | + | chr8_1:36349153-36349172 | Msa1191630:CDS | 35.0% |
| GGAAACAAACAAAGTTCCAG+AGG | + | chr8_1:36347563-36347582 | Msa1191630:CDS | 40.0% | |
| CCTGAATTTAGTATCACCTC+TGG | - | chr8_1:36347582-36347601 | None:intergenic | 40.0% | |
| CCAGAGGTGATACTAAATTC+AGG | + | chr8_1:36347579-36347598 | Msa1191630:CDS | 40.0% | |
| ! | TGAAGTCCTCACCTCAATTT+TGG | + | chr8_1:36347656-36347675 | Msa1191630:CDS | 40.0% |
| CATCAACCAAAATTGAGGTG+AGG | - | chr8_1:36347665-36347684 | None:intergenic | 40.0% | |
| ATGCCATTGAAATAGGCTAC+AGG | + | chr8_1:36347682-36347701 | Msa1191630:CDS | 40.0% | |
| ATGCCTGTAGCCTATTTCAA+TGG | - | chr8_1:36347688-36347707 | None:intergenic | 40.0% | |
| ! | CTAAAGCTTTTGACACAGCT+TGG | - | chr8_1:36347752-36347771 | None:intergenic | 40.0% |
| !! | GTGTCAAAAGCTTTAGAGCT+AGG | + | chr8_1:36347756-36347775 | Msa1191630:CDS | 40.0% |
| AGCATCAGTACACCATAACT+TGG | - | chr8_1:36347817-36347836 | None:intergenic | 40.0% | |
| ATTTGATTCACTGGCCAGTA+AGG | + | chr8_1:36348011-36348030 | Msa1191630:CDS | 40.0% | |
| !! | ACGTCTTGTTTCAACCTTAC+TGG | - | chr8_1:36348028-36348047 | None:intergenic | 40.0% |
| AGGTTGAAACAAGACGTTGA+AGG | + | chr8_1:36348031-36348050 | Msa1191630:CDS | 40.0% | |
| ! | AGGCCATAACTTTAAAGGTG+AGG | + | chr8_1:36348051-36348070 | Msa1191630:CDS | 40.0% |
| AAAAGGAACATGGGAAGCTA+TGG | + | chr8_1:36348093-36348112 | Msa1191630:CDS | 40.0% | |
| TTGGGCCTAGTAAAGTCTAT+TGG | + | chr8_1:36348130-36348149 | Msa1191630:CDS | 40.0% | |
| !! | TCTATTGGTGTCAGCAACTT+TGG | + | chr8_1:36348145-36348164 | Msa1191630:CDS | 40.0% |
| AATCTCTCCTGCTGTTAATC+AGG | + | chr8_1:36348204-36348223 | Msa1191630:CDS | 40.0% | |
| AGAGAATTCTGCAAGCAGAA+AGG | + | chr8_1:36348532-36348551 | Msa1191630:CDS | 40.0% | |
| !! | CTTAATTTGTACCCTCCTAG+TGG | - | chr8_1:36348580-36348599 | None:intergenic | 40.0% |
| ! | GGAGGGTACAAATTAAGTTG+GGG | + | chr8_1:36348583-36348602 | Msa1191630:CDS | 40.0% |
| ! | CCAAGTCTAAAGTTTGACCA+TGG | - | chr8_1:36348800-36348819 | None:intergenic | 40.0% |
| CCATGGTCAAACTTTAGACT+TGG | + | chr8_1:36348797-36348816 | Msa1191630:intron | 40.0% | |
| CTAAGATGGATATACCAGCA+AGG | + | chr8_1:36348983-36349002 | Msa1191630:CDS | 40.0% | |
| AAGATGGATATACCAGCAAG+GGG | + | chr8_1:36348985-36349004 | Msa1191630:CDS | 40.0% | |
| CTTGTTGAAGCTCTTCACAA+TGG | - | chr8_1:36349017-36349036 | None:intergenic | 40.0% | |
| CATTGTGAAGAGCTTCAACA+AGG | + | chr8_1:36349015-36349034 | Msa1191630:CDS | 40.0% | |
| ! | AGCTCTTCCAATGACTTGTA+AGG | - | chr8_1:36349163-36349182 | None:intergenic | 40.0% |
| GGAAACAAACAAAGTTCCAG+AGG | + | chr8_1:36347563-36347582 | Msa1191630:CDS | 40.0% | |
| CCTGAATTTAGTATCACCTC+TGG | - | chr8_1:36347582-36347601 | None:intergenic | 40.0% | |
| CCAGAGGTGATACTAAATTC+AGG | + | chr8_1:36347579-36347598 | Msa1191630:CDS | 40.0% | |
| ! | TGAAGTCCTCACCTCAATTT+TGG | + | chr8_1:36347656-36347675 | Msa1191630:CDS | 40.0% |
| CATCAACCAAAATTGAGGTG+AGG | - | chr8_1:36347665-36347684 | None:intergenic | 40.0% | |
| ATGCCATTGAAATAGGCTAC+AGG | + | chr8_1:36347682-36347701 | Msa1191630:CDS | 40.0% | |
| ATGCCTGTAGCCTATTTCAA+TGG | - | chr8_1:36347688-36347707 | None:intergenic | 40.0% | |
| ! | CTAAAGCTTTTGACACAGCT+TGG | - | chr8_1:36347752-36347771 | None:intergenic | 40.0% |
| !! | GTGTCAAAAGCTTTAGAGCT+AGG | + | chr8_1:36347756-36347775 | Msa1191630:CDS | 40.0% |
| AGCATCAGTACACCATAACT+TGG | - | chr8_1:36347817-36347836 | None:intergenic | 40.0% | |
| ATTTGATTCACTGGCCAGTA+AGG | + | chr8_1:36348011-36348030 | Msa1191630:CDS | 40.0% | |
| !! | ACGTCTTGTTTCAACCTTAC+TGG | - | chr8_1:36348028-36348047 | None:intergenic | 40.0% |
| AGGTTGAAACAAGACGTTGA+AGG | + | chr8_1:36348031-36348050 | Msa1191630:CDS | 40.0% | |
| ! | AGGCCATAACTTTAAAGGTG+AGG | + | chr8_1:36348051-36348070 | Msa1191630:CDS | 40.0% |
| AAAAGGAACATGGGAAGCTA+TGG | + | chr8_1:36348093-36348112 | Msa1191630:CDS | 40.0% | |
| TTGGGCCTAGTAAAGTCTAT+TGG | + | chr8_1:36348130-36348149 | Msa1191630:CDS | 40.0% | |
| !! | TCTATTGGTGTCAGCAACTT+TGG | + | chr8_1:36348145-36348164 | Msa1191630:CDS | 40.0% |
| AATCTCTCCTGCTGTTAATC+AGG | + | chr8_1:36348204-36348223 | Msa1191630:CDS | 40.0% | |
| AGAGAATTCTGCAAGCAGAA+AGG | + | chr8_1:36348532-36348551 | Msa1191630:CDS | 40.0% | |
| !! | CTTAATTTGTACCCTCCTAG+TGG | - | chr8_1:36348580-36348599 | None:intergenic | 40.0% |
| ! | GGAGGGTACAAATTAAGTTG+GGG | + | chr8_1:36348583-36348602 | Msa1191630:CDS | 40.0% |
| ! | CCAAGTCTAAAGTTTGACCA+TGG | - | chr8_1:36348800-36348819 | None:intergenic | 40.0% |
| CCATGGTCAAACTTTAGACT+TGG | + | chr8_1:36348797-36348816 | Msa1191630:intron | 40.0% | |
| CTAAGATGGATATACCAGCA+AGG | + | chr8_1:36348983-36349002 | Msa1191630:CDS | 40.0% | |
| AAGATGGATATACCAGCAAG+GGG | + | chr8_1:36348985-36349004 | Msa1191630:CDS | 40.0% | |
| CTTGTTGAAGCTCTTCACAA+TGG | - | chr8_1:36349017-36349036 | None:intergenic | 40.0% | |
| CATTGTGAAGAGCTTCAACA+AGG | + | chr8_1:36349015-36349034 | Msa1191630:CDS | 40.0% | |
| ! | AGCTCTTCCAATGACTTGTA+AGG | - | chr8_1:36349163-36349182 | None:intergenic | 40.0% |
| ATTGAGGTGAGGACTTCATG+TGG | - | chr8_1:36347654-36347673 | None:intergenic | 45.0% | |
| !! | TTTTGAGAGCTGGGAGAACA+AGG | - | chr8_1:36347848-36347867 | None:intergenic | 45.0% |
| !!! | TGAGAGTGGTTTTGAGAGCT+GGG | - | chr8_1:36347857-36347876 | None:intergenic | 45.0% |
| !!! | TTGAGAGTGGTTTTGAGAGC+TGG | - | chr8_1:36347858-36347877 | None:intergenic | 45.0% |
| ATGACAACTGCGTGCTTAGT+TGG | - | chr8_1:36348409-36348428 | None:intergenic | 45.0% | |
| AGGTGGAAATGAACCCATCA+TGG | + | chr8_1:36348494-36348513 | Msa1191630:intron | 45.0% | |
| GTTTCCTCTGATGCCATGAT+GGG | - | chr8_1:36348510-36348529 | None:intergenic | 45.0% | |
| AGTTTCCTCTGATGCCATGA+TGG | - | chr8_1:36348511-36348530 | None:intergenic | 45.0% | |
| AAGGAATCCATGTGAGTGCA+TGG | + | chr8_1:36348551-36348570 | Msa1191630:CDS | 45.0% | |
| ATCGAATTCTCCATCACTGC+AGG | - | chr8_1:36348613-36348632 | None:intergenic | 45.0% | |
| GATTCTGCGCAAAATTGCTG+AGG | + | chr8_1:36348630-36348649 | Msa1191630:CDS | 45.0% | |
| ! | TAGAAAGAAGAGTGTAGCCC+AGG | + | chr8_1:36348654-36348673 | Msa1191630:CDS | 45.0% |
| TGAAGAGCTTCAACAAGGAG+AGG | + | chr8_1:36349020-36349039 | Msa1191630:CDS | 45.0% | |
| TCCTCAATGCAGACTGCTAA+AGG | + | chr8_1:36349111-36349130 | Msa1191630:CDS | 45.0% | |
| ACAAGTCATTGGAAGAGCTG+TGG | + | chr8_1:36349164-36349183 | Msa1191630:CDS | 45.0% | |
| CAAGTCATTGGAAGAGCTGT+GGG | + | chr8_1:36349165-36349184 | Msa1191630:CDS | 45.0% | |
| ATTGAGGTGAGGACTTCATG+TGG | - | chr8_1:36347654-36347673 | None:intergenic | 45.0% | |
| !! | TTTTGAGAGCTGGGAGAACA+AGG | - | chr8_1:36347848-36347867 | None:intergenic | 45.0% |
| !!! | TGAGAGTGGTTTTGAGAGCT+GGG | - | chr8_1:36347857-36347876 | None:intergenic | 45.0% |
| !!! | TTGAGAGTGGTTTTGAGAGC+TGG | - | chr8_1:36347858-36347877 | None:intergenic | 45.0% |
| ATGACAACTGCGTGCTTAGT+TGG | - | chr8_1:36348409-36348428 | None:intergenic | 45.0% | |
| AGGTGGAAATGAACCCATCA+TGG | + | chr8_1:36348494-36348513 | Msa1191630:intron | 45.0% | |
| GTTTCCTCTGATGCCATGAT+GGG | - | chr8_1:36348510-36348529 | None:intergenic | 45.0% | |
| AGTTTCCTCTGATGCCATGA+TGG | - | chr8_1:36348511-36348530 | None:intergenic | 45.0% | |
| AAGGAATCCATGTGAGTGCA+TGG | + | chr8_1:36348551-36348570 | Msa1191630:CDS | 45.0% | |
| ATCGAATTCTCCATCACTGC+AGG | - | chr8_1:36348613-36348632 | None:intergenic | 45.0% | |
| GATTCTGCGCAAAATTGCTG+AGG | + | chr8_1:36348630-36348649 | Msa1191630:CDS | 45.0% | |
| ! | TAGAAAGAAGAGTGTAGCCC+AGG | + | chr8_1:36348654-36348673 | Msa1191630:CDS | 45.0% |
| TGAAGAGCTTCAACAAGGAG+AGG | + | chr8_1:36349020-36349039 | Msa1191630:CDS | 45.0% | |
| TCCTCAATGCAGACTGCTAA+AGG | + | chr8_1:36349111-36349130 | Msa1191630:CDS | 45.0% | |
| ACAAGTCATTGGAAGAGCTG+TGG | + | chr8_1:36349164-36349183 | Msa1191630:CDS | 45.0% | |
| CAAGTCATTGGAAGAGCTGT+GGG | + | chr8_1:36349165-36349184 | Msa1191630:CDS | 45.0% | |
| !! | AAAGAATTAAAATAAATTAT+TGG | - | chr8_1:36348335-36348354 | None:intergenic | 5.0% |
| !!! | ATAATTTATTTTAATTCTTT+TGG | + | chr8_1:36348335-36348354 | Msa1191630:intron | 5.0% |
| !! | AAAGAATTAAAATAAATTAT+TGG | - | chr8_1:36348335-36348354 | None:intergenic | 5.0% |
| !!! | ATAATTTATTTTAATTCTTT+TGG | + | chr8_1:36348335-36348354 | Msa1191630:intron | 5.0% |
| ! | AGGACTTCATGTGGTGGAGA+GGG | - | chr8_1:36347645-36347664 | None:intergenic | 50.0% |
| TGAACCCATCATGGCATCAG+AGG | + | chr8_1:36348503-36348522 | Msa1191630:CDS | 50.0% | |
| GCCTTTAGCAGTCTGCATTG+AGG | - | chr8_1:36349115-36349134 | None:intergenic | 50.0% | |
| TCATTGGAAGAGCTGTGGGA+TGG | + | chr8_1:36349169-36349188 | Msa1191630:CDS | 50.0% | |
| ! | AGGACTTCATGTGGTGGAGA+GGG | - | chr8_1:36347645-36347664 | None:intergenic | 50.0% |
| TGAACCCATCATGGCATCAG+AGG | + | chr8_1:36348503-36348522 | Msa1191630:CDS | 50.0% | |
| GCCTTTAGCAGTCTGCATTG+AGG | - | chr8_1:36349115-36349134 | None:intergenic | 50.0% | |
| TCATTGGAAGAGCTGTGGGA+TGG | + | chr8_1:36349169-36349188 | Msa1191630:CDS | 50.0% | |
| ! | GAGGACTTCATGTGGTGGAG+AGG | - | chr8_1:36347646-36347665 | None:intergenic | 55.0% |
| GAGGTGAGGACTTCATGTGG+TGG | - | chr8_1:36347651-36347670 | None:intergenic | 55.0% | |
| TTTGACACAGCTTGGCCCAG+AGG | - | chr8_1:36347744-36347763 | None:intergenic | 55.0% | |
| GTGGTGACCATGCACTCACA+TGG | - | chr8_1:36348561-36348580 | None:intergenic | 55.0% | |
| GTGAGTGCATGGTCACCACT+AGG | + | chr8_1:36348562-36348581 | Msa1191630:CDS | 55.0% | |
| AGTGCATGGTCACCACTAGG+AGG | + | chr8_1:36348565-36348584 | Msa1191630:CDS | 55.0% | |
| GTGCATGGTCACCACTAGGA+GGG | + | chr8_1:36348566-36348585 | Msa1191630:CDS | 55.0% | |
| CAATGGGAATTGCCCCTTGC+TGG | - | chr8_1:36349000-36349019 | None:intergenic | 55.0% | |
| ! | GAGGACTTCATGTGGTGGAG+AGG | - | chr8_1:36347646-36347665 | None:intergenic | 55.0% |
| GAGGTGAGGACTTCATGTGG+TGG | - | chr8_1:36347651-36347670 | None:intergenic | 55.0% | |
| TTTGACACAGCTTGGCCCAG+AGG | - | chr8_1:36347744-36347763 | None:intergenic | 55.0% | |
| GTGGTGACCATGCACTCACA+TGG | - | chr8_1:36348561-36348580 | None:intergenic | 55.0% | |
| GTGAGTGCATGGTCACCACT+AGG | + | chr8_1:36348562-36348581 | Msa1191630:CDS | 55.0% | |
| AGTGCATGGTCACCACTAGG+AGG | + | chr8_1:36348565-36348584 | Msa1191630:CDS | 55.0% | |
| GTGCATGGTCACCACTAGGA+GGG | + | chr8_1:36348566-36348585 | Msa1191630:CDS | 55.0% | |
| CAATGGGAATTGCCCCTTGC+TGG | - | chr8_1:36349000-36349019 | None:intergenic | 55.0% | |
| TTGGGGTTCGCCTGCAGTGA+TGG | + | chr8_1:36348600-36348619 | Msa1191630:CDS | 60.0% | |
| TTGGGGTTCGCCTGCAGTGA+TGG | + | chr8_1:36348600-36348619 | Msa1191630:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36347561 | 36349201 | 36347561 | ID=Msa1191630;Name=Msa1191630 |
| chr8_1 | mRNA | 36347561 | 36349201 | 36347561 | ID=Msa1191630-mRNA-1;Parent=Msa1191630;Name=Msa1191630-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|4|0|321 |
| chr8_1 | exon | 36347561 | 36347877 | 36347561 | ID=Msa1191630-mRNA-1:exon:11987;Parent=Msa1191630-mRNA-1 |
| chr8_1 | exon | 36347982 | 36348225 | 36347982 | ID=Msa1191630-mRNA-1:exon:11988;Parent=Msa1191630-mRNA-1 |
| chr8_1 | exon | 36348496 | 36348675 | 36348496 | ID=Msa1191630-mRNA-1:exon:11989;Parent=Msa1191630-mRNA-1 |
| chr8_1 | exon | 36348977 | 36349201 | 36348977 | ID=Msa1191630-mRNA-1:exon:11990;Parent=Msa1191630-mRNA-1 |
| chr8_1 | CDS | 36347561 | 36347877 | 36347561 | ID=Msa1191630-mRNA-1:cds;Parent=Msa1191630-mRNA-1 |
| chr8_1 | CDS | 36347982 | 36348225 | 36347982 | ID=Msa1191630-mRNA-1:cds;Parent=Msa1191630-mRNA-1 |
| chr8_1 | CDS | 36348496 | 36348675 | 36348496 | ID=Msa1191630-mRNA-1:cds;Parent=Msa1191630-mRNA-1 |
| chr8_1 | CDS | 36348977 | 36349201 | 36348977 | ID=Msa1191630-mRNA-1:cds;Parent=Msa1191630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
