Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195260 | XP_003627159.1 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195260 | sp|Q9CAI5|CKL2_ARATH | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1195260 | Msa1233430 | 0.997545 | 1.749888e-244 | -8.615850e-47 |
| Msa1195260 | Msa1275740 | 0.843730 | 1.170432e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195260 | MtrunA17_Chr8g0342821 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| Msa1195260 | MtrunA17_Chr2g0329981 | 83.438 | 477 | 74 | 5 | 1 | 474 | 1 | 475 | 0.0 | 809 |
| Msa1195260 | MtrunA17_Chr4g0071031 | 75.314 | 478 | 90 | 7 | 1 | 474 | 1 | 454 | 0.0 | 690 |
| Msa1195260 | MtrunA17_Chr2g0299661 | 68.723 | 470 | 142 | 4 | 1 | 469 | 1 | 466 | 0.0 | 653 |
| Msa1195260 | MtrunA17_Chr1g0183631 | 60.000 | 475 | 155 | 8 | 1 | 465 | 1 | 450 | 0.0 | 547 |
| Msa1195260 | MtrunA17_Chr7g0261501 | 77.538 | 325 | 64 | 3 | 1 | 318 | 1 | 323 | 0.0 | 540 |
| Msa1195260 | MtrunA17_Chr1g0166821 | 79.180 | 317 | 63 | 2 | 1 | 314 | 2 | 318 | 0.0 | 540 |
| Msa1195260 | MtrunA17_Chr1g0187571 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 519 |
| Msa1195260 | MtrunA17_Chr6g0486611 | 77.926 | 299 | 65 | 1 | 1 | 298 | 1 | 299 | 1.04e-178 | 507 |
| Msa1195260 | MtrunA17_Chr8g0390211 | 76.589 | 299 | 69 | 1 | 1 | 298 | 1 | 299 | 1.41e-174 | 496 |
| Msa1195260 | MtrunA17_Chr3g0140071 | 65.964 | 332 | 106 | 3 | 1 | 326 | 1 | 331 | 3.41e-162 | 465 |
| Msa1195260 | MtrunA17_Chr1g0167261 | 71.000 | 300 | 84 | 2 | 1 | 297 | 2 | 301 | 1.81e-161 | 460 |
| Msa1195260 | MtrunA17_Chr1g0146151 | 66.144 | 319 | 107 | 1 | 1 | 318 | 1 | 319 | 3.62e-160 | 460 |
| Msa1195260 | MtrunA17_Chr7g0214531 | 37.276 | 279 | 157 | 6 | 9 | 272 | 37 | 312 | 5.25e-57 | 199 |
| Msa1195260 | MtrunA17_Chr3g0140431 | 38.951 | 267 | 151 | 6 | 9 | 266 | 38 | 301 | 8.03e-57 | 198 |
| Msa1195260 | MtrunA17_Chr1g0146301 | 37.828 | 267 | 154 | 6 | 9 | 266 | 124 | 387 | 2.65e-56 | 198 |
| Msa1195260 | MtrunA17_Chr1g0213321 | 37.956 | 274 | 157 | 6 | 9 | 272 | 119 | 389 | 8.86e-56 | 197 |
| Msa1195260 | MtrunA17_Chr7g0253211 | 38.542 | 288 | 158 | 7 | 4 | 275 | 317 | 601 | 2.73e-55 | 198 |
| Msa1195260 | MtrunA17_Chr8g0340491 | 36.957 | 276 | 151 | 8 | 9 | 266 | 128 | 398 | 1.24e-50 | 182 |
| Msa1195260 | MtrunA17_Chr5g0405421 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.08e-13 | 73.2 |
| Msa1195260 | MtrunA17_Chr3g0107011 | 27.197 | 239 | 120 | 11 | 1 | 213 | 5 | 215 | 1.06e-11 | 66.6 |
| Msa1195260 | MtrunA17_Chr3g0123141 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 5.80e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195260 | AT1G72710.1 | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| Msa1195260 | AT4G26100.1 | 69.979 | 473 | 112 | 9 | 1 | 470 | 1 | 446 | 0.0 | 652 |
| Msa1195260 | AT5G57015.1 | 69.538 | 476 | 101 | 9 | 1 | 474 | 1 | 434 | 0.0 | 644 |
| Msa1195260 | AT2G19470.1 | 69.533 | 407 | 102 | 5 | 1 | 404 | 1 | 388 | 0.0 | 573 |
| Msa1195260 | AT1G03930.1 | 60.970 | 474 | 173 | 6 | 1 | 467 | 1 | 469 | 0.0 | 542 |
| Msa1195260 | AT5G44100.1 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| Msa1195260 | AT5G44100.2 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| Msa1195260 | AT3G23340.1 | 64.096 | 415 | 135 | 6 | 1 | 414 | 1 | 402 | 0.0 | 531 |
| Msa1195260 | AT4G28540.1 | 73.620 | 326 | 78 | 2 | 1 | 318 | 5 | 330 | 0.0 | 520 |
| Msa1195260 | AT4G14340.1 | 63.260 | 411 | 137 | 5 | 1 | 410 | 7 | 404 | 0.0 | 519 |
| Msa1195260 | AT5G43320.1 | 56.495 | 485 | 186 | 9 | 1 | 469 | 1 | 476 | 0.0 | 517 |
| Msa1195260 | AT4G14340.2 | 78.788 | 297 | 62 | 1 | 1 | 296 | 7 | 303 | 0.0 | 511 |
| Msa1195260 | AT1G04440.1 | 69.940 | 336 | 100 | 1 | 1 | 335 | 1 | 336 | 3.31e-179 | 510 |
| Msa1195260 | AT5G43320.2 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.97e-177 | 501 |
| Msa1195260 | AT5G43320.3 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.97e-177 | 501 |
| Msa1195260 | AT4G28880.3 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1195260 | AT4G28880.2 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1195260 | AT4G28880.1 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1195260 | AT4G28880.4 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1195260 | AT3G23340.2 | 63.291 | 395 | 131 | 6 | 21 | 414 | 7 | 388 | 7.36e-175 | 498 |
| Msa1195260 | AT4G28860.2 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 3.19e-172 | 489 |
| Msa1195260 | AT4G28860.1 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 1.42e-171 | 489 |
| Msa1195260 | AT4G08800.1 | 68.525 | 305 | 63 | 3 | 1 | 304 | 1 | 273 | 3.26e-153 | 437 |
| Msa1195260 | AT2G25760.2 | 39.146 | 281 | 153 | 6 | 4 | 266 | 100 | 380 | 4.36e-61 | 211 |
| Msa1195260 | AT2G25760.1 | 38.434 | 281 | 152 | 7 | 4 | 266 | 100 | 377 | 5.71e-58 | 203 |
| Msa1195260 | AT3G03940.1 | 38.408 | 289 | 159 | 7 | 4 | 276 | 133 | 418 | 4.44e-56 | 198 |
| Msa1195260 | AT5G18190.2 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 5.07e-56 | 198 |
| Msa1195260 | AT5G18190.1 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 5.07e-56 | 198 |
| Msa1195260 | AT3G13670.1 | 36.042 | 283 | 163 | 6 | 9 | 276 | 137 | 416 | 2.30e-54 | 194 |
| Msa1195260 | AT2G17890.1 | 25.893 | 224 | 150 | 8 | 7 | 222 | 106 | 321 | 7.89e-13 | 71.2 |
| Msa1195260 | AT3G50530.1 | 25.532 | 235 | 135 | 8 | 5 | 218 | 144 | 359 | 6.96e-12 | 68.2 |
| Msa1195260 | AT5G39440.1 | 29.245 | 212 | 128 | 10 | 9 | 212 | 19 | 216 | 2.70e-11 | 66.2 |
| Msa1195260 | AT3G06030.1 | 26.941 | 219 | 134 | 7 | 8 | 212 | 67 | 273 | 6.62e-11 | 65.1 |
| Msa1195260 | AT3G29160.3 | 29.577 | 213 | 127 | 11 | 9 | 212 | 20 | 218 | 6.83e-11 | 64.3 |
| Msa1195260 | AT4G36070.1 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.50e-11 | 64.3 |
| Msa1195260 | AT4G36070.2 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.61e-11 | 64.3 |
Find 148 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCAAACATAAATAATT+TGG | 0.143188 | 8_1:-43099415 | Msa1195260:CDS |
| TTTCTTTATTGTATACTTAT+AGG | 0.154065 | 8_1:+43099196 | None:intergenic |
| ATTTGATTATTAATTAATTA+AGG | 0.210566 | 8_1:+43103873 | None:intergenic |
| GAAGAAGAAAAGGGTATATC+TGG | 0.226962 | 8_1:+43103710 | None:intergenic |
| GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 8_1:-43102290 | Msa1195260:CDS |
| TAACACATGCATACAATTAA+TGG | 0.233781 | 8_1:+43098686 | None:intergenic |
| ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 8_1:-43102493 | Msa1195260:CDS |
| TTCTTCATTTGTCTGAATAT+TGG | 0.261094 | 8_1:+43103460 | None:intergenic |
| GGAAAAGATGGTAGGAATAT+TGG | 0.271839 | 8_1:-43099943 | Msa1195260:CDS |
| CATATCATTGTGAACTATAT+CGG | 0.303394 | 8_1:-43099032 | Msa1195260:three_prime_UTR |
| AAAATTGGTAGCGGATCTTT+TGG | 0.312915 | 8_1:-43103586 | Msa1195260:CDS |
| CTCACGCTGGATTCAAGTTT+AGG | 0.327718 | 8_1:-43099519 | Msa1195260:CDS |
| TATCTGGGAAATGCTGAAAA+AGG | 0.327889 | 8_1:+43103726 | None:intergenic |
| CTTGCTGCTGGACCGAGTTC+TGG | 0.338183 | 8_1:-43100190 | Msa1195260:CDS |
| ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 8_1:-43102289 | Msa1195260:CDS |
| TCACATGTAAGCTTGATCTT+TGG | 0.350873 | 8_1:+43098870 | None:intergenic |
| AACAAAACTAGCCTCGTAAA+AGG | 0.358968 | 8_1:-43099153 | Msa1195260:three_prime_UTR |
| GAAAAGATGGTAGGAATATT+GGG | 0.370564 | 8_1:-43099942 | Msa1195260:CDS |
| ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 8_1:-43101117 | Msa1195260:intron |
| ACAATAAAGAAAATATGTTT+TGG | 0.374535 | 8_1:-43099185 | Msa1195260:three_prime_UTR |
| ATTAAACCCTAATTGAAAAT+CGG | 0.386169 | 8_1:+43103646 | None:intergenic |
| ACCTCAGTGACCGACAATAA+TGG | 0.388781 | 8_1:+43100640 | None:intergenic |
| TTTCTGCAGTCTACCTTGGC+AGG | 0.394985 | 8_1:-43100872 | Msa1195260:intron |
| TATCGAGTTCGAATTTCTTT+CGG | 0.396736 | 8_1:-43099626 | Msa1195260:CDS |
| CACTTACAGGGTCTTGCTGC+TGG | 0.397023 | 8_1:-43100202 | Msa1195260:intron |
| CTTCATACTTCCATTATTGT+CGG | 0.399001 | 8_1:-43100650 | Msa1195260:CDS |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 8_1:+43100367 | None:intergenic |
| CCAAACCTTCACGGATGAAT+AGG | 0.413827 | 8_1:+43100571 | None:intergenic |
| GGTTTAATGGAACCTCGAAT+TGG | 0.417126 | 8_1:-43103631 | Msa1195260:exon |
| ATATCATTGTGAACTATATC+GGG | 0.417397 | 8_1:-43099031 | Msa1195260:three_prime_UTR |
| ATGCCATAAAAGTACCTATA+GGG | 0.418213 | 8_1:+43102093 | None:intergenic |
| TCAGAATTTACAAGGAAGAA+AGG | 0.421192 | 8_1:+43099313 | None:intergenic |
| ACTGGAATGGAGCGAGTAAC+GGG | 0.428025 | 8_1:-43098846 | Msa1195260:three_prime_UTR |
| AATTTGGATTCAACGCTTAG+AGG | 0.429713 | 8_1:-43099399 | Msa1195260:CDS |
| GCTAGTATGAATACTCATCT+TGG | 0.435171 | 8_1:-43101123 | Msa1195260:CDS |
| AAGATTCCATCATTAGCAAT+AGG | 0.437123 | 8_1:+43099880 | None:intergenic |
| TTGGAAATAAGTTCCGTCTT+GGG | 0.443286 | 8_1:-43103612 | Msa1195260:CDS |
| CGTCATCGTAGAAGAAGAAA+AGG | 0.445616 | 8_1:+43103700 | None:intergenic |
| GACAAAATATCTTGTGTAAG+TGG | 0.446487 | 8_1:-43098711 | Msa1195260:three_prime_UTR |
| ACACCGGACCATTTCACATT+CGG | 0.447768 | 8_1:+43102569 | None:intergenic |
| CACCATAGCATCTTTAGATC+CGG | 0.452993 | 8_1:+43099822 | None:intergenic |
| ATACAACAATTGAGGGTGCT+TGG | 0.454552 | 8_1:+43102745 | None:intergenic |
| TCTTATGCTTGCCGATCAAA+TGG | 0.457248 | 8_1:-43102450 | Msa1195260:intron |
| AGTTTGATTATGTCTTCGAT+TGG | 0.461696 | 8_1:-43100365 | Msa1195260:CDS |
| TTTGCTTCATACAACAATTG+AGG | 0.464158 | 8_1:+43102737 | None:intergenic |
| TCTGGACCTATTGCTAATGA+TGG | 0.466720 | 8_1:-43099886 | Msa1195260:CDS |
| TTGCTTCATACAACAATTGA+GGG | 0.471529 | 8_1:+43102738 | None:intergenic |
| ATCCTTGTGATGGATTTACT+TGG | 0.473724 | 8_1:-43102530 | Msa1195260:CDS |
| CCACTTACAAATGACTTAAC+CGG | 0.474625 | 8_1:-43099841 | Msa1195260:CDS |
| GAAAGTTTCTACATCTATTG+AGG | 0.478508 | 8_1:-43100800 | Msa1195260:intron |
| CTGGAATACCGAATGTGAAA+TGG | 0.479886 | 8_1:-43102577 | Msa1195260:CDS |
| GCAAATGCTGATGGACAGTC+AGG | 0.482487 | 8_1:-43100151 | Msa1195260:intron |
| GTGTTTGTAATTTGTTGTAA+TGG | 0.486115 | 8_1:-43098762 | Msa1195260:three_prime_UTR |
| CCCACTCGAAGGAGAACCTC+TGG | 0.486536 | 8_1:-43099904 | Msa1195260:CDS |
| CCGGTTAAGTCATTTGTAAG+TGG | 0.488016 | 8_1:+43099841 | None:intergenic |
| ATTGGAAATAAGTTCCGTCT+TGG | 0.488327 | 8_1:-43103613 | Msa1195260:CDS |
| GAGCACAACCGAGTATCATC+TGG | 0.489104 | 8_1:-43099444 | Msa1195260:CDS |
| CGGTTAAGTCATTTGTAAGT+GGG | 0.492030 | 8_1:+43099842 | None:intergenic |
| CTAGCTTCTGCAAATGCTGA+TGG | 0.497772 | 8_1:-43100160 | Msa1195260:CDS |
| AGGGATGATTTAGAGTCGCT+TGG | 0.498396 | 8_1:-43100997 | Msa1195260:CDS |
| GGTATTTCTGCAGTCTACCT+TGG | 0.499822 | 8_1:-43100876 | Msa1195260:intron |
| TCGAATTTCTTTCGGTCAAG+TGG | 0.500221 | 8_1:-43099618 | Msa1195260:CDS |
| CACATCAGCATATTCCCTAT+AGG | 0.500725 | 8_1:-43102107 | Msa1195260:intron |
| TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 8_1:-43102516 | Msa1195260:CDS |
| CGGAACTTATTTCCAATTCG+AGG | 0.504125 | 8_1:+43103619 | None:intergenic |
| ATCAAGCTTACATGTGAGAC+TGG | 0.504186 | 8_1:-43098864 | Msa1195260:three_prime_UTR |
| TGTTTCTTCCAGATGATACT+CGG | 0.516048 | 8_1:+43099436 | None:intergenic |
| AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 8_1:-43102296 | Msa1195260:CDS |
| TAGGTGTACATCATTGACTT+TGG | 0.518918 | 8_1:-43102156 | Msa1195260:CDS |
| TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 8_1:+43102506 | None:intergenic |
| CTCCTCTCGTCCTCTCACGC+TGG | 0.525433 | 8_1:-43099532 | Msa1195260:CDS |
| AAGAAGAAAAGGGTATATCT+GGG | 0.527099 | 8_1:+43103711 | None:intergenic |
| GACTGGAATGGAGCGAGTAA+CGG | 0.528568 | 8_1:-43098847 | Msa1195260:three_prime_UTR |
| GTTTCTCTCTACTGTAATTG+TGG | 0.528903 | 8_1:-43098910 | Msa1195260:three_prime_UTR |
| AAGAAAACAAATGATAGTAA+AGG | 0.529240 | 8_1:+43099086 | None:intergenic |
| TCTTCCTTGTAAATTCTGAA+AGG | 0.531260 | 8_1:-43099309 | Msa1195260:three_prime_UTR |
| AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 8_1:+43102293 | None:intergenic |
| GGAGCAGTCCGTAAAAGCTC+TGG | 0.533818 | 8_1:-43099498 | Msa1195260:CDS |
| AACCGGATCTAAAGATGCTA+TGG | 0.540198 | 8_1:-43099824 | Msa1195260:intron |
| TAAACCTTTCAGAATTTACA+AGG | 0.541737 | 8_1:+43099305 | None:intergenic |
| AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 8_1:-43102297 | Msa1195260:CDS |
| TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 8_1:+43102507 | None:intergenic |
| TTCTGCAGTCTACCTTGGCA+GGG | 0.547539 | 8_1:-43100871 | Msa1195260:intron |
| AAACAAGGCCCAAACCTTCA+CGG | 0.553845 | 8_1:+43100562 | None:intergenic |
| CAGCGTGAGAGGACGAGAGG+AGG | 0.553851 | 8_1:+43099533 | None:intergenic |
| CGTGACCTATTCATCCGTGA+AGG | 0.553976 | 8_1:-43100576 | Msa1195260:intron |
| CAGAGAGAATAAGAATCTGA+CGG | 0.555069 | 8_1:-43101160 | Msa1195260:CDS |
| AGCGTGAGAGGACGAGAGGA+GGG | 0.556937 | 8_1:+43099534 | None:intergenic |
| GAAGTATGAAGCAAATTCTG+AGG | 0.560679 | 8_1:+43100662 | None:intergenic |
| TGTGTAGGTGGTGGAAAAGA+TGG | 0.562910 | 8_1:-43099955 | Msa1195260:intron |
| GTGAAATGGTCCGGTGTGGA+AGG | 0.568781 | 8_1:-43102563 | Msa1195260:CDS |
| AAACTTGAATCCAGCGTGAG+AGG | 0.575553 | 8_1:+43099522 | None:intergenic |
| TCCAGAGGTTCTCCTTCGAG+TGG | 0.576149 | 8_1:+43099903 | None:intergenic |
| AAGTTCACATATCATGTCAT+CGG | 0.576819 | 8_1:-43099466 | Msa1195260:CDS |
| AGAGTACAACATCCTTGTGA+TGG | 0.579202 | 8_1:-43102540 | Msa1195260:CDS |
| AGCAGCCGTGATGCAGCTGT+TGG | 0.579930 | 8_1:-43099570 | Msa1195260:CDS |
| ATCATTAGCAATAGGTCCAG+AGG | 0.580010 | 8_1:+43099888 | None:intergenic |
| AGGGAAACCCACCATTTGAT+CGG | 0.583445 | 8_1:+43102439 | None:intergenic |
| CCTTGGCAGGGATTGAAAGC+AGG | 0.584404 | 8_1:-43100859 | Msa1195260:CDS |
| AGAGAGAATAAGAATCTGAC+GGG | 0.585309 | 8_1:-43101159 | Msa1195260:CDS |
| CTTTGCTAGTCTCTCTGCCG+TGG | 0.586144 | 8_1:-43100690 | Msa1195260:intron |
| CTTTAATAGAGCAAAGCCGT+AGG | 0.589565 | 8_1:-43101017 | Msa1195260:intron |
| TTGATCGGCAAGCATAAGAA+CGG | 0.592423 | 8_1:+43102454 | None:intergenic |
| ATACCGAATGTGAAATGGTC+CGG | 0.593452 | 8_1:-43102572 | Msa1195260:CDS |
| GCTTACATGTGAGACTGGAA+TGG | 0.595249 | 8_1:-43098859 | Msa1195260:three_prime_UTR |
| ACCATCACTTACAATACCAC+GGG | 0.602147 | 8_1:+43100299 | None:intergenic |
| TTTAATAGAGCAAAGCCGTA+GGG | 0.604857 | 8_1:-43101016 | Msa1195260:intron |
| CACCATCACTTACAATACCA+CGG | 0.605886 | 8_1:+43100298 | None:intergenic |
| GGTTAAGTCATTTGTAAGTG+GGG | 0.606360 | 8_1:+43099843 | None:intergenic |
| GTCTGCATTTAAACGATGAG+AGG | 0.609688 | 8_1:-43099368 | Msa1195260:CDS |
| CTTCGTCTGATCCCACTCGA+AGG | 0.610986 | 8_1:-43099915 | Msa1195260:CDS |
| AAGCTGTATAAAATACTGCA+AGG | 0.612393 | 8_1:-43102716 | Msa1195260:CDS |
| ATCGCCACTCCTCCTTCCCG+TGG | 0.613928 | 8_1:-43100315 | Msa1195260:CDS |
| TCACAAAGTGCGGAGTGGAG+TGG | 0.616198 | 8_1:-43099273 | Msa1195260:three_prime_UTR |
| CCTGCTTTCAATCCCTGCCA+AGG | 0.616580 | 8_1:+43100859 | None:intergenic |
| CCAGAGGTTCTCCTTCGAGT+GGG | 0.619887 | 8_1:+43099904 | None:intergenic |
| ATCCAGCGTGAGAGGACGAG+AGG | 0.620493 | 8_1:+43099530 | None:intergenic |
| TCCATTATTGTCGGTCACTG+AGG | 0.621842 | 8_1:-43100641 | Msa1195260:CDS |
| TTCGGTCAAGTGGATCTGCA+AGG | 0.626728 | 8_1:-43099608 | Msa1195260:CDS |
| TGCAGCTGTTGGCAGTGAGA+CGG | 0.627439 | 8_1:-43099559 | Msa1195260:CDS |
| ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 8_1:-43102286 | Msa1195260:CDS |
| CTTACAATACCACGGGAAGG+AGG | 0.631667 | 8_1:+43100306 | None:intergenic |
| AATACCACGGGAAGGAGGAG+TGG | 0.634617 | 8_1:+43100311 | None:intergenic |
| TCTGCATTTAAACGATGAGA+GGG | 0.635819 | 8_1:-43099367 | Msa1195260:CDS |
| AAGTATGAAGCAAATTCTGA+GGG | 0.637275 | 8_1:+43100663 | None:intergenic |
| GCGACTCTAAATCATCCCTA+CGG | 0.637624 | 8_1:+43101001 | None:intergenic |
| TCAAGTGGATCTGCAAGGCG+AGG | 0.638769 | 8_1:-43099603 | Msa1195260:CDS |
| TCAGCATTTGCAGAAGCTAG+CGG | 0.639218 | 8_1:+43100163 | None:intergenic |
| TACAGTAGAGAGAAACGCGG+TGG | 0.641361 | 8_1:+43098917 | None:intergenic |
| GTCATCGTAGAAGAAGAAAA+GGG | 0.644208 | 8_1:+43103701 | None:intergenic |
| TAGGTGGTGGAAAAGATGGT+AGG | 0.644820 | 8_1:-43099951 | Msa1195260:CDS |
| ACAGTAGAGAGAAACGCGGT+GGG | 0.646446 | 8_1:+43098918 | None:intergenic |
| GCTAGCGGCAGACCAGAACT+CGG | 0.647842 | 8_1:+43100178 | None:intergenic |
| GTTGTACTCTCCTTCCACAC+CGG | 0.649985 | 8_1:+43102553 | None:intergenic |
| CACTGCCAACAGCTGCATCA+CGG | 0.650486 | 8_1:+43099565 | None:intergenic |
| TATCATTGTGAACTATATCG+GGG | 0.650629 | 8_1:-43099030 | Msa1195260:three_prime_UTR |
| ATCATTGTGAACTATATCGG+GGG | 0.657737 | 8_1:-43099029 | Msa1195260:three_prime_UTR |
| CTGGAATGGAGCGAGTAACG+GGG | 0.663375 | 8_1:-43098845 | Msa1195260:three_prime_UTR |
| GGCCAAGTAAATCCATCACA+AGG | 0.666479 | 8_1:+43102528 | None:intergenic |
| TCACTTACAATACCACGGGA+AGG | 0.675431 | 8_1:+43100303 | None:intergenic |
| CAAATTCTGAGGGATAGCCA+CGG | 0.686783 | 8_1:+43100673 | None:intergenic |
| ACAACAAATTACAAACACAA+CGG | 0.687735 | 8_1:+43098767 | None:intergenic |
| GAATGTGAAATGGTCCGGTG+TGG | 0.716403 | 8_1:-43102567 | Msa1195260:CDS |
| CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 8_1:+43102282 | None:intergenic |
| AAGATGGTAGGAATATTGGG+TGG | 0.729848 | 8_1:-43099939 | Msa1195260:CDS |
| CTGTATAAAATACTGCAAGG+AGG | 0.737729 | 8_1:-43102713 | Msa1195260:CDS |
| TATGCTTTATATCATCCCTG+AGG | 0.757607 | 8_1:+43099051 | None:intergenic |
| AATTACAGTAGAGAGAAACG+CGG | 0.835990 | 8_1:+43098914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTCTTTTGAATTTT+TGG | - | chr8_1:43099149-43099168 | Msa1195260:three_prime_UTR | 10.0% |
| !!! | TCCTATTTATATTTTATTTT+TGG | - | chr8_1:43101988-43102007 | Msa1195260:intron | 10.0% |
| !! | TCCAAAAATAAAATATAAAT+AGG | + | chr8_1:43101992-43102011 | None:intergenic | 10.0% |
| !!! | TTAAGTTATTTAATTTTTAG+TGG | - | chr8_1:43102288-43102307 | Msa1195260:CDS | 10.0% |
| !!! | AATATTTTTCATTTTCTTAA+CGG | + | chr8_1:43103874-43103893 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTTTTCAAAATT+CGG | + | chr8_1:43099116-43099135 | None:intergenic | 15.0% |
| !! | AAATAAAGTAATGATTGATT+AGG | - | chr8_1:43099483-43099502 | Msa1195260:CDS | 15.0% |
| !! | ATTTATTCAATTTCTGTAAT+AGG | - | chr8_1:43100034-43100053 | Msa1195260:intron | 15.0% |
| !!! | TTTTGTAAAATCTATTATCA+TGG | - | chr8_1:43100544-43100563 | Msa1195260:intron | 15.0% |
| !!! | TGAATCCTTTAATATTATTT+TGG | - | chr8_1:43100923-43100942 | Msa1195260:intron | 15.0% |
| !! | GATTACCAAAATAATATTAA+AGG | + | chr8_1:43100931-43100950 | None:intergenic | 15.0% |
| !! | AAAAACTAATTGATACTTAA+TGG | + | chr8_1:43101052-43101071 | None:intergenic | 15.0% |
| !! | GTGAATAAAAAGTTATTAAA+AGG | - | chr8_1:43101146-43101165 | Msa1195260:CDS | 15.0% |
| !!! | AATGATTTTAAAAGACATAA+TGG | + | chr8_1:43101799-43101818 | None:intergenic | 15.0% |
| !! | AAAATATAAATAGGAAAACA+AGG | + | chr8_1:43101983-43102002 | None:intergenic | 15.0% |
| !! | TTTCTTTATTGTATACTTAT+AGG | + | chr8_1:43103334-43103353 | None:intergenic | 15.0% |
| !!! | ACAATAAAGAAAATATGTTT+TGG | - | chr8_1:43103342-43103361 | Msa1195260:intron | 15.0% |
| !! | GTTAAGAAAATGAAAAATAT+TGG | - | chr8_1:43103873-43103892 | Msa1195260:five_prime_UTR | 15.0% |
| !! | ATTAAACCCTAATTGAAAAT+CGG | + | chr8_1:43098884-43098903 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTGAATTTT+AGG | - | chr8_1:43099015-43099034 | Msa1195260:three_prime_UTR | 20.0% |
| !!! | TTTTGTTGTTGTGAATTTTA+GGG | - | chr8_1:43099016-43099035 | Msa1195260:three_prime_UTR | 20.0% |
| !!! | CATTTTCTTTTTCAAAATTC+GGG | + | chr8_1:43099115-43099134 | None:intergenic | 20.0% |
| !!! | TCAATAACAACAAAAGTATT+CGG | + | chr8_1:43099187-43099206 | None:intergenic | 20.0% |
| !! | TAAATTTACGAACTGATATT+TGG | - | chr8_1:43099563-43099582 | Msa1195260:CDS | 20.0% |
| !!! | ATTTTTGTTTTGTTTGATTC+AGG | - | chr8_1:43099747-43099766 | Msa1195260:intron | 20.0% |
| !! | AGTTATTATGTTTGTAAGTA+TGG | + | chr8_1:43100888-43100907 | None:intergenic | 20.0% |
| !! | TTGATTGTATACCTATTATA+TGG | + | chr8_1:43100984-43101003 | None:intergenic | 20.0% |
| !! | GAATTTATGCCAATTAAATT+TGG | - | chr8_1:43101170-43101189 | Msa1195260:intron | 20.0% |
| !! | AATAAATAATCGTAAAGACT+AGG | + | chr8_1:43101249-43101268 | None:intergenic | 20.0% |
| !!! | GTTCTTATGTATTTTTTAAG+AGG | - | chr8_1:43101557-43101576 | Msa1195260:intron | 20.0% |
| !!! | TTATGTATTTTTTAAGAGGA+AGG | - | chr8_1:43101561-43101580 | Msa1195260:intron | 20.0% |
| !! | TGTCAAATGCTAAATAATAA+AGG | + | chr8_1:43101601-43101620 | None:intergenic | 20.0% |
| !!! | CATTTGACATATCTTTTAAT+TGG | - | chr8_1:43101612-43101631 | Msa1195260:intron | 20.0% |
| !!! | TTTAAAATCATTGTTGATTG+TGG | - | chr8_1:43101807-43101826 | Msa1195260:intron | 20.0% |
| !!! | TTAAAATCATTGTTGATTGT+GGG | - | chr8_1:43101808-43101827 | Msa1195260:intron | 20.0% |
| !!! | TTTTTTCTTTGTCATAGTTT+AGG | - | chr8_1:43102075-43102094 | Msa1195260:intron | 20.0% |
| !! | TAACAAATGAAAATCATTCA+AGG | + | chr8_1:43102525-43102544 | None:intergenic | 20.0% |
| !! | CACATCAAACATAAATAATT+TGG | - | chr8_1:43103112-43103131 | Msa1195260:intron | 20.0% |
| !!! | ATAAAGAAAATATGTTTTGG+TGG | - | chr8_1:43103345-43103364 | Msa1195260:intron | 20.0% |
| !! | AAGAAAACAAATGATAGTAA+AGG | + | chr8_1:43103444-43103463 | None:intergenic | 20.0% |
| !! | TTCAATTCCGATTTTCAATT+AGG | - | chr8_1:43098874-43098893 | Msa1195260:three_prime_UTR | 25.0% |
| !! | TCAATTCCGATTTTCAATTA+GGG | - | chr8_1:43098875-43098894 | Msa1195260:three_prime_UTR | 25.0% |
| !! | GATTTTCAATTAGGGTTTAA+TGG | - | chr8_1:43098883-43098902 | Msa1195260:three_prime_UTR | 25.0% |
| ! | ATCACAAAAATGCAAGAAAT+TGG | + | chr8_1:43098994-43099013 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGTTTTTGTTGC+AGG | - | chr8_1:43099042-43099061 | Msa1195260:three_prime_UTR | 25.0% |
| ! | TTCTTCATTTGTCTGAATAT+TGG | + | chr8_1:43099070-43099089 | None:intergenic | 25.0% |
| ! | TTATTGAAGTTTGATGAGAA+GGG | - | chr8_1:43099200-43099219 | Msa1195260:three_prime_UTR | 25.0% |
| !! | TTTGAAACAAAGAGTTGTAT+AGG | - | chr8_1:43099277-43099296 | Msa1195260:three_prime_UTR | 25.0% |
| ! | TATGGGATATTGAATTTCAT+TGG | - | chr8_1:43099303-43099322 | Msa1195260:three_prime_UTR | 25.0% |
| ! | TCAGTTAAGTTAATGATTAC+TGG | - | chr8_1:43099456-43099475 | Msa1195260:CDS | 25.0% |
| ! | TATAACTTCAAATACCAAAC+CGG | + | chr8_1:43099521-43099540 | None:intergenic | 25.0% |
| ! | ATACACAAATTCACTAAGTT+GGG | + | chr8_1:43099849-43099868 | None:intergenic | 25.0% |
| ! | AATACACAAATTCACTAAGT+TGG | + | chr8_1:43099850-43099869 | None:intergenic | 25.0% |
| !! | CTTAGTGAATTTGTGTATTT+TGG | - | chr8_1:43099851-43099870 | Msa1195260:CDS | 25.0% |
| !!! | TTGGCTTAAATGTTTTTTGT+TGG | - | chr8_1:43099909-43099928 | Msa1195260:CDS | 25.0% |
| !!! | TGGCTTAAATGTTTTTTGTT+GGG | - | chr8_1:43099910-43099929 | Msa1195260:CDS | 25.0% |
| ! | TTGAGACATTATAAGAAAAC+TGG | + | chr8_1:43100143-43100162 | None:intergenic | 25.0% |
| !!! | ATACCAAGTCATTTTTACAT+CGG | - | chr8_1:43100202-43100221 | Msa1195260:intron | 25.0% |
| !! | TTTTCTGATTTTATTCAGCA+TGG | - | chr8_1:43100463-43100482 | Msa1195260:intron | 25.0% |
| !! | CAAAATAAGAAAGCATGATA+GGG | + | chr8_1:43100529-43100548 | None:intergenic | 25.0% |
| !! | ACAAAATAAGAAAGCATGAT+AGG | + | chr8_1:43100530-43100549 | None:intergenic | 25.0% |
| ! | AATTTGGACATCCATATAAT+AGG | - | chr8_1:43100970-43100989 | Msa1195260:CDS | 25.0% |
| ! | CCAATGAAACCAAATTTAAT+TGG | + | chr8_1:43101182-43101201 | None:intergenic | 25.0% |
| !! | CCAATTAAATTTGGTTTCAT+TGG | - | chr8_1:43101179-43101198 | Msa1195260:intron | 25.0% |
| ! | AATCAATGGCTATTAAGAAA+GGG | + | chr8_1:43101465-43101484 | None:intergenic | 25.0% |
| ! | AAATCAATGGCTATTAAGAA+AGG | + | chr8_1:43101466-43101485 | None:intergenic | 25.0% |
| !!! | CATTTTCAGGTAAAAATCAA+TGG | + | chr8_1:43101479-43101498 | None:intergenic | 25.0% |
| ! | ATTGGATACTCTTTCTTATT+TGG | - | chr8_1:43101630-43101649 | Msa1195260:intron | 25.0% |
| ! | AAAGAGAAGTTAAAACAACA+AGG | + | chr8_1:43102405-43102424 | None:intergenic | 25.0% |
| ! | TCCAACATCATATATGATTA+AGG | - | chr8_1:43102850-43102869 | Msa1195260:intron | 25.0% |
| ! | TCCTTAATCATATATGATGT+TGG | + | chr8_1:43102854-43102873 | None:intergenic | 25.0% |
| ! | TAAACCTTTCAGAATTTACA+AGG | + | chr8_1:43103225-43103244 | None:intergenic | 25.0% |
| ! | AGGTTACGAAAAATATTCAT+CGG | + | chr8_1:43103424-43103443 | None:intergenic | 25.0% |
| ! | CATATCATTGTGAACTATAT+CGG | - | chr8_1:43103495-43103514 | Msa1195260:intron | 25.0% |
| ! | ATATCATTGTGAACTATATC+GGG | - | chr8_1:43103496-43103515 | Msa1195260:intron | 25.0% |
| ! | ACAACAAATTACAAACACAA+CGG | + | chr8_1:43103763-43103782 | None:intergenic | 25.0% |
| !!! | GTGTTTGTAATTTGTTGTAA+TGG | - | chr8_1:43103765-43103784 | Msa1195260:five_prime_UTR | 25.0% |
| ! | TAACACATGCATACAATTAA+TGG | + | chr8_1:43103844-43103863 | None:intergenic | 25.0% |
| !! | ATTTTTCATTTTCTTAACGG+TGG | + | chr8_1:43103871-43103890 | None:intergenic | 25.0% |
| AAATTCCAAAAAACAGCGTT+AGG | - | chr8_1:43098673-43098692 | Msa1195260:three_prime_UTR | 30.0% | |
| GAAAAAGGAAAGGACAAAAT+AGG | + | chr8_1:43098789-43098808 | None:intergenic | 30.0% | |
| ! | AAGAAGAAAAGGGTATATCT+GGG | + | chr8_1:43098819-43098838 | None:intergenic | 30.0% |
| !! | TCTTTTGGAGAGATCTATTT+AGG | - | chr8_1:43098956-43098975 | Msa1195260:three_prime_UTR | 30.0% |
| GTTATTGAAGTTTGATGAGA+AGG | - | chr8_1:43099199-43099218 | Msa1195260:three_prime_UTR | 30.0% | |
| TATTGAAGTTTGATGAGAAG+GGG | - | chr8_1:43099201-43099220 | Msa1195260:three_prime_UTR | 30.0% | |
| AAAGAGTTGTATAGGCAATA+TGG | - | chr8_1:43099285-43099304 | Msa1195260:three_prime_UTR | 30.0% | |
| AAGAGTTGTATAGGCAATAT+GGG | - | chr8_1:43099286-43099305 | Msa1195260:three_prime_UTR | 30.0% | |
| TAATCGATACTTCGATTACA+AGG | + | chr8_1:43099371-43099390 | None:intergenic | 30.0% | |
| AGGTAATTAGATGATTGATC+AGG | - | chr8_1:43099398-43099417 | Msa1195260:CDS | 30.0% | |
| TGATTAACCAAGTCTGATTA+TGG | + | chr8_1:43099439-43099458 | None:intergenic | 30.0% | |
| TTGCTTCATACAACAATTGA+GGG | + | chr8_1:43099792-43099811 | None:intergenic | 30.0% | |
| TTTGCTTCATACAACAATTG+AGG | + | chr8_1:43099793-43099812 | None:intergenic | 30.0% | |
| AAGCTGTATAAAATACTGCA+AGG | - | chr8_1:43099811-43099830 | Msa1195260:intron | 30.0% | |
| TAGACTTCATATTACTCACT+TGG | - | chr8_1:43099890-43099909 | Msa1195260:CDS | 30.0% | |
| ! | TTTGTTGGGTTTCTTTTCTT+TGG | - | chr8_1:43099924-43099943 | Msa1195260:CDS | 30.0% |
| TGAATAAATCCTCAAGACTA+GGG | + | chr8_1:43100023-43100042 | None:intergenic | 30.0% | |
| TTGAATAAATCCTCAAGACT+AGG | + | chr8_1:43100024-43100043 | None:intergenic | 30.0% | |
| TTACAAGCTTATGCAATACA+GGG | + | chr8_1:43100110-43100129 | None:intergenic | 30.0% | |
| ATTACAAGCTTATGCAATAC+AGG | + | chr8_1:43100111-43100130 | None:intergenic | 30.0% | |
| !!! | TACCAAGTCATTTTTACATC+GGG | - | chr8_1:43100203-43100222 | Msa1195260:intron | 30.0% |
| TTCATATTTGCCTCTTATGT+AGG | - | chr8_1:43100352-43100371 | Msa1195260:CDS | 30.0% | |
| ! | ATTCCCTATAGGTACTTTTA+TGG | - | chr8_1:43100431-43100450 | Msa1195260:intron | 30.0% |
| !! | ATGCCATAAAAGTACCTATA+GGG | + | chr8_1:43100437-43100456 | None:intergenic | 30.0% |
| ATGATAGGGAATATATCGAT+GGG | + | chr8_1:43100515-43100534 | None:intergenic | 30.0% | |
| ATCATGGAAAATCCTATATC+TGG | - | chr8_1:43100560-43100579 | Msa1195260:intron | 30.0% | |
| ! | AAAATCCTATATCTGGAATC+TGG | - | chr8_1:43100567-43100586 | Msa1195260:intron | 30.0% |
| GCTGATTACTACTATTTAGT+AGG | - | chr8_1:43100623-43100642 | Msa1195260:CDS | 30.0% | |
| GATTACTACTATTTAGTAGG+AGG | - | chr8_1:43100626-43100645 | Msa1195260:CDS | 30.0% | |
| AAGAAAATAGAATCAATGCC+AGG | + | chr8_1:43100751-43100770 | None:intergenic | 30.0% | |
| AATGGATCTTAGTTCAAACA+AGG | + | chr8_1:43100861-43100880 | None:intergenic | 30.0% | |
| ATAACTTATGTTGCTGTAAG+TGG | - | chr8_1:43101287-43101306 | Msa1195260:intron | 30.0% | |
| ATGAATACTCATCTTGGAAT+TGG | - | chr8_1:43101410-43101429 | Msa1195260:intron | 30.0% | |
| ! | AGCAAAAAACTCACATTTTC+AGG | + | chr8_1:43101492-43101511 | None:intergenic | 30.0% |
| GAAAGTTTCTACATCTATTG+AGG | - | chr8_1:43101727-43101746 | Msa1195260:intron | 30.0% | |
| TACATCTATTGAGGTATGAT+TGG | - | chr8_1:43101736-43101755 | Msa1195260:intron | 30.0% | |
| AAGTATGAAGCAAATTCTGA+GGG | + | chr8_1:43101867-43101886 | None:intergenic | 30.0% | |
| CTTCATACTTCCATTATTGT+CGG | - | chr8_1:43101877-43101896 | Msa1195260:intron | 30.0% | |
| ! | CTTTTCAGATAAGCATAATC+TGG | + | chr8_1:43101924-43101943 | None:intergenic | 30.0% |
| ! | AACCTAAACTATGGTTTTCA+AGG | + | chr8_1:43102030-43102049 | None:intergenic | 30.0% |
| !! | TCATAGTTTAGGTTCTAGAT+GGG | - | chr8_1:43102086-43102105 | Msa1195260:intron | 30.0% |
| AATCGAAGACATAATCAAAC+TGG | + | chr8_1:43102163-43102182 | None:intergenic | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | - | chr8_1:43102162-43102181 | Msa1195260:intron | 30.0% | |
| !!! | TACCAGTGCATTTTTTAATG+TGG | - | chr8_1:43102543-43102562 | Msa1195260:CDS | 30.0% |
| GAAAAGATGGTAGGAATATT+GGG | - | chr8_1:43102585-43102604 | Msa1195260:intron | 30.0% | |
| AAGATTCCATCATTAGCAAT+AGG | + | chr8_1:43102650-43102669 | None:intergenic | 30.0% | |
| ! | TATGGTGCGTGTTTTATATA+TGG | - | chr8_1:43102721-43102740 | Msa1195260:CDS | 30.0% |
| ! | ATGGTGCGTGTTTTATATAT+GGG | - | chr8_1:43102722-43102741 | Msa1195260:CDS | 30.0% |
| TATCGAGTTCGAATTTCTTT+CGG | - | chr8_1:43102901-43102920 | Msa1195260:intron | 30.0% | |
| AAGTTCACATATCATGTCAT+CGG | - | chr8_1:43103061-43103080 | Msa1195260:intron | 30.0% | |
| TCAGAATTTACAAGGAAGAA+AGG | + | chr8_1:43103217-43103236 | None:intergenic | 30.0% | |
| TCTTCCTTGTAAATTCTGAA+AGG | - | chr8_1:43103218-43103237 | Msa1195260:intron | 30.0% | |
| ! | ATACTCATTTTCACAAAGTG+CGG | - | chr8_1:43103244-43103263 | Msa1195260:intron | 30.0% |
| !!! | TCTTTGATATTTTTAGCCTC+AGG | - | chr8_1:43103460-43103479 | Msa1195260:CDS | 30.0% |
| !!! | CTTTGATATTTTTAGCCTCA+GGG | - | chr8_1:43103461-43103480 | Msa1195260:CDS | 30.0% |
| TATCATTGTGAACTATATCG+GGG | - | chr8_1:43103497-43103516 | Msa1195260:intron | 30.0% | |
| ! | TTTTTGACAGAAGCTATTTG+TGG | + | chr8_1:43103722-43103741 | None:intergenic | 30.0% |
| GACAAAATATCTTGTGTAAG+TGG | - | chr8_1:43103816-43103835 | Msa1195260:five_prime_UTR | 30.0% | |
| TATCTGGGAAATGCTGAAAA+AGG | + | chr8_1:43098804-43098823 | None:intergenic | 35.0% | |
| ! | GAAGAAGAAAAGGGTATATC+TGG | + | chr8_1:43098820-43098839 | None:intergenic | 35.0% |
| GTCATCGTAGAAGAAGAAAA+GGG | + | chr8_1:43098829-43098848 | None:intergenic | 35.0% | |
| ATTGGAAATAAGTTCCGTCT+TGG | - | chr8_1:43098914-43098933 | Msa1195260:three_prime_UTR | 35.0% | |
| TTGGAAATAAGTTCCGTCTT+GGG | - | chr8_1:43098915-43098934 | Msa1195260:three_prime_UTR | 35.0% | |
| ! | TACCAATTTTTCTCCCAAGA+CGG | + | chr8_1:43098931-43098950 | None:intergenic | 35.0% |
| !!! | AAAATTGGTAGCGGATCTTT+TGG | - | chr8_1:43098941-43098960 | Msa1195260:three_prime_UTR | 35.0% |
| GTAATCACCATAATCAGACT+TGG | - | chr8_1:43099429-43099448 | Msa1195260:CDS | 35.0% | |
| ! | GATTAGGTGATGTTGATTAC+CGG | - | chr8_1:43099499-43099518 | Msa1195260:CDS | 35.0% |
| CTGTATAAAATACTGCAAGG+AGG | - | chr8_1:43099814-43099833 | Msa1195260:intron | 35.0% | |
| !! | ATCCTTGTGATGGATTTACT+TGG | - | chr8_1:43099997-43100016 | Msa1195260:intron | 35.0% |
| ACAATTTCCTCATGGGTTTA+GGG | - | chr8_1:43100238-43100257 | Msa1195260:intron | 35.0% | |
| AACTGATACATAACAAGCGT+TGG | + | chr8_1:43100333-43100352 | None:intergenic | 35.0% | |
| ATGATGTACACCTACATAAG+AGG | + | chr8_1:43100365-43100384 | None:intergenic | 35.0% | |
| !! | TAGGTGTACATCATTGACTT+TGG | - | chr8_1:43100371-43100390 | Msa1195260:CDS | 35.0% |
| !! | GATGCCATAAAAGTACCTAT+AGG | + | chr8_1:43100438-43100457 | None:intergenic | 35.0% |
| TGATAGGGAATATATCGATG+GGG | + | chr8_1:43100514-43100533 | None:intergenic | 35.0% | |
| CATGATAGGGAATATATCGA+TGG | + | chr8_1:43100516-43100535 | None:intergenic | 35.0% | |
| AACATCCAGATTCCAGATAT+AGG | + | chr8_1:43100575-43100594 | None:intergenic | 35.0% | |
| ! | AACTAATTTTGAGCTTTGCG+CGG | - | chr8_1:43100703-43100722 | Msa1195260:intron | 35.0% |
| GGCTAACAAAACTATCATCA+AGG | + | chr8_1:43100840-43100859 | None:intergenic | 35.0% | |
| GTTTGTAAGTATGGCATCAA+TGG | + | chr8_1:43100879-43100898 | None:intergenic | 35.0% | |
| GATTCTTATTCTCTCTGCAA+GGG | + | chr8_1:43101364-43101383 | None:intergenic | 35.0% | |
| AGATTCTTATTCTCTCTGCA+AGG | + | chr8_1:43101365-43101384 | None:intergenic | 35.0% | |
| CAGAGAGAATAAGAATCTGA+CGG | - | chr8_1:43101367-43101386 | Msa1195260:intron | 35.0% | |
| AGAGAGAATAAGAATCTGAC+GGG | - | chr8_1:43101368-43101387 | Msa1195260:intron | 35.0% | |
| GCTAGTATGAATACTCATCT+TGG | - | chr8_1:43101404-43101423 | Msa1195260:intron | 35.0% | |
| TTTAATAGAGCAAAGCCGTA+GGG | - | chr8_1:43101511-43101530 | Msa1195260:intron | 35.0% | |
| GAAGTATGAAGCAAATTCTG+AGG | + | chr8_1:43101868-43101887 | None:intergenic | 35.0% | |
| GTCCTTGAAAACCATAGTTT+AGG | - | chr8_1:43102025-43102044 | Msa1195260:intron | 35.0% | |
| !! | ACCATAGTTTAGGTTCTAGA+TGG | - | chr8_1:43102035-43102054 | Msa1195260:intron | 35.0% |
| !! | CCATAGTTTAGGTTCTAGAT+GGG | - | chr8_1:43102036-43102055 | Msa1195260:intron | 35.0% |
| !! | GTCATAGTTTAGGTTCTAGA+TGG | - | chr8_1:43102085-43102104 | Msa1195260:intron | 35.0% |
| ACATAATCAAACTGGAATCC+TGG | + | chr8_1:43102155-43102174 | None:intergenic | 35.0% | |
| CACCACATTAAAAAATGCAC+TGG | + | chr8_1:43102548-43102567 | None:intergenic | 35.0% | |
| GGAAAAGATGGTAGGAATAT+TGG | - | chr8_1:43102584-43102603 | Msa1195260:intron | 35.0% | |
| GGTTAAGTCATTTGTAAGTG+GGG | + | chr8_1:43102687-43102706 | None:intergenic | 35.0% | |
| CGGTTAAGTCATTTGTAAGT+GGG | + | chr8_1:43102688-43102707 | None:intergenic | 35.0% | |
| CCACTTACAAATGACTTAAC+CGG | - | chr8_1:43102686-43102705 | Msa1195260:intron | 35.0% | |
| TGTTTCTTCCAGATGATACT+CGG | + | chr8_1:43103094-43103113 | None:intergenic | 35.0% | |
| AATTTGGATTCAACGCTTAG+AGG | - | chr8_1:43103128-43103147 | Msa1195260:intron | 35.0% | |
| TCTGCATTTAAACGATGAGA+GGG | - | chr8_1:43103160-43103179 | Msa1195260:intron | 35.0% | |
| AGAAAAAGCTGCAAGCAAAT+TGG | - | chr8_1:43103300-43103319 | Msa1195260:intron | 35.0% | |
| GAAAAAGCTGCAAGCAAATT+GGG | - | chr8_1:43103301-43103320 | Msa1195260:intron | 35.0% | |
| !!! | TTTACGAGGCTAGTTTTGTT+AGG | + | chr8_1:43103374-43103393 | None:intergenic | 35.0% |
| ! | AACAAAACTAGCCTCGTAAA+AGG | - | chr8_1:43103374-43103393 | Msa1195260:intron | 35.0% |
| TATGCTTTATATCATCCCTG+AGG | + | chr8_1:43103479-43103498 | None:intergenic | 35.0% | |
| ATCATTGTGAACTATATCGG+GGG | - | chr8_1:43103498-43103517 | Msa1195260:intron | 35.0% | |
| AATTACAGTAGAGAGAAACG+CGG | + | chr8_1:43103616-43103635 | None:intergenic | 35.0% | |
| GTTTCTCTCTACTGTAATTG+TGG | - | chr8_1:43103617-43103636 | Msa1195260:CDS | 35.0% | |
| TCACATGTAAGCTTGATCTT+TGG | + | chr8_1:43103660-43103679 | None:intergenic | 35.0% | |
| TTCCAAAAAACAGCGTTAGG+AGG | - | chr8_1:43098676-43098695 | Msa1195260:three_prime_UTR | 40.0% | |
| !!! | TACCTCCTAACGCTGTTTTT+TGG | + | chr8_1:43098681-43098700 | None:intergenic | 40.0% |
| GGGAAATGCTGAAAAAGGAA+AGG | + | chr8_1:43098799-43098818 | None:intergenic | 40.0% | |
| CGTCATCGTAGAAGAAGAAA+AGG | + | chr8_1:43098830-43098849 | None:intergenic | 40.0% | |
| GGTTTAATGGAACCTCGAAT+TGG | - | chr8_1:43098896-43098915 | Msa1195260:three_prime_UTR | 40.0% | |
| CGGAACTTATTTCCAATTCG+AGG | + | chr8_1:43098911-43098930 | None:intergenic | 40.0% | |
| TTCCGTCTTGGGAGAAAAAT+TGG | - | chr8_1:43098926-43098945 | Msa1195260:three_prime_UTR | 40.0% | |
| CTTGGGAGAAAAATTGGTAG+CGG | - | chr8_1:43098932-43098951 | Msa1195260:three_prime_UTR | 40.0% | |
| !! | GAAGTATCGATTACAGACGT+AGG | - | chr8_1:43099378-43099397 | Msa1195260:CDS | 40.0% |
| ! | GATGATTGATCAGGTTAGTC+AGG | - | chr8_1:43099407-43099426 | Msa1195260:CDS | 40.0% |
| !! | ATACAACAATTGAGGGTGCT+TGG | + | chr8_1:43099785-43099804 | None:intergenic | 40.0% |
| !! | GGTTTCTTTTCTTTGGAAGC+TGG | - | chr8_1:43099931-43099950 | Msa1195260:CDS | 40.0% |
| CTGGAATACCGAATGTGAAA+TGG | - | chr8_1:43099950-43099969 | Msa1195260:CDS | 40.0% | |
| ATACCGAATGTGAAATGGTC+CGG | - | chr8_1:43099955-43099974 | Msa1195260:intron | 40.0% | |
| AGAGTACAACATCCTTGTGA+TGG | - | chr8_1:43099987-43100006 | Msa1195260:intron | 40.0% | |
| TTGATCGGCAAGCATAAGAA+CGG | + | chr8_1:43100076-43100095 | None:intergenic | 40.0% | |
| TCTTATGCTTGCCGATCAAA+TGG | - | chr8_1:43100077-43100096 | Msa1195260:intron | 40.0% | |
| GTCCCGATGTAAAAATGACT+TGG | + | chr8_1:43100208-43100227 | None:intergenic | 40.0% | |
| AAAGCCAGACAATTTCCTCA+TGG | - | chr8_1:43100230-43100249 | Msa1195260:intron | 40.0% | |
| AAGCCAGACAATTTCCTCAT+GGG | - | chr8_1:43100231-43100250 | Msa1195260:intron | 40.0% | |
| AAACCCATGAGGAAATTGTC+TGG | + | chr8_1:43100237-43100256 | None:intergenic | 40.0% | |
| GACAATTTCCTCATGGGTTT+AGG | - | chr8_1:43100237-43100256 | Msa1195260:intron | 40.0% | |
| CACATCAGCATATTCCCTAT+AGG | - | chr8_1:43100420-43100439 | Msa1195260:intron | 40.0% | |
| ! | ACTAATTTTGAGCTTTGCGC+GGG | - | chr8_1:43100704-43100723 | Msa1195260:intron | 40.0% |
| ACTGGTGTAACAATCATGCA+AGG | + | chr8_1:43100802-43100821 | None:intergenic | 40.0% | |
| AGGCAAATAGCTTAACGAAC+TGG | + | chr8_1:43100820-43100839 | None:intergenic | 40.0% | |
| TATGTTGCTGTAAGTGGTCA+AGG | - | chr8_1:43101293-43101312 | Msa1195260:intron | 40.0% | |
| CTTTAATAGAGCAAAGCCGT+AGG | - | chr8_1:43101510-43101529 | Msa1195260:intron | 40.0% | |
| CTATTCATCCGTGAAGGTTT+GGG | - | chr8_1:43101957-43101976 | Msa1195260:intron | 40.0% | |
| ! | CCCATCTAGAACCTAAACTA+TGG | + | chr8_1:43102039-43102058 | None:intergenic | 40.0% |
| ACCATCACTTACAATACCAC+GGG | + | chr8_1:43102231-43102250 | None:intergenic | 40.0% | |
| CACCATCACTTACAATACCA+CGG | + | chr8_1:43102232-43102251 | None:intergenic | 40.0% | |
| AGTGACAATGTGACACTTAC+AGG | - | chr8_1:43102312-43102331 | Msa1195260:CDS | 40.0% | |
| GTGACAATGTGACACTTACA+GGG | - | chr8_1:43102313-43102332 | Msa1195260:CDS | 40.0% | |
| GGATGAGTCAGATGACAAAA+AGG | + | chr8_1:43102504-43102523 | None:intergenic | 40.0% | |
| AAGATGGTAGGAATATTGGG+TGG | - | chr8_1:43102588-43102607 | Msa1195260:intron | 40.0% | |
| ATCATTAGCAATAGGTCCAG+AGG | + | chr8_1:43102642-43102661 | None:intergenic | 40.0% | |
| TCTGGACCTATTGCTAATGA+TGG | - | chr8_1:43102641-43102660 | Msa1195260:intron | 40.0% | |
| CCGGTTAAGTCATTTGTAAG+TGG | + | chr8_1:43102689-43102708 | None:intergenic | 40.0% | |
| AACCGGATCTAAAGATGCTA+TGG | - | chr8_1:43102703-43102722 | Msa1195260:intron | 40.0% | |
| CACCATAGCATCTTTAGATC+CGG | + | chr8_1:43102708-43102727 | None:intergenic | 40.0% | |
| CTTGCAGAAGTCAAAGATGA+TGG | - | chr8_1:43102775-43102794 | Msa1195260:intron | 40.0% | |
| TCGAATTTCTTTCGGTCAAG+TGG | - | chr8_1:43102909-43102928 | Msa1195260:intron | 40.0% | |
| ! | TATGAGCACCAGAGCTTTTA+CGG | + | chr8_1:43103040-43103059 | None:intergenic | 40.0% |
| GTCTGCATTTAAACGATGAG+AGG | - | chr8_1:43103159-43103178 | Msa1195260:intron | 40.0% | |
| ! | ATGAACAGAAGCCTTTTACG+AGG | + | chr8_1:43103388-43103407 | None:intergenic | 40.0% |
| ATCAAGCTTACATGTGAGAC+TGG | - | chr8_1:43103663-43103682 | Msa1195260:five_prime_UTR | 40.0% | |
| ! | GGTGATGTTGATTACCGGTT+TGG | - | chr8_1:43099504-43099523 | Msa1195260:CDS | 45.0% |
| ACACCGGACCATTTCACATT+CGG | + | chr8_1:43099961-43099980 | None:intergenic | 45.0% | |
| GGCCAAGTAAATCCATCACA+AGG | + | chr8_1:43100002-43100021 | None:intergenic | 45.0% | |
| !! | TTTACTTGGCCCTAGTCTTG+AGG | - | chr8_1:43100011-43100030 | Msa1195260:intron | 45.0% |
| TATGCTTGCCGATCAAATGG+TGG | - | chr8_1:43100080-43100099 | Msa1195260:intron | 45.0% | |
| ATGCTTGCCGATCAAATGGT+GGG | - | chr8_1:43100081-43100100 | Msa1195260:intron | 45.0% | |
| AGGGAAACCCACCATTTGAT+CGG | + | chr8_1:43100091-43100110 | None:intergenic | 45.0% | |
| ATTTCCTCATGGGTTTAGGG+AGG | - | chr8_1:43100241-43100260 | Msa1195260:intron | 45.0% | |
| ! | CTAATTTTGAGCTTTGCGCG+GGG | - | chr8_1:43100705-43100724 | Msa1195260:intron | 45.0% |
| !!! | CTTTCCTGGTTTTGCATTCC+TGG | - | chr8_1:43100730-43100749 | Msa1195260:intron | 45.0% |
| AATGCCAGGAATGCAAAACC+AGG | + | chr8_1:43100737-43100756 | None:intergenic | 45.0% | |
| TATTACACACCCCAGAGAGA+GGG | + | chr8_1:43101218-43101237 | None:intergenic | 45.0% | |
| ATATTACACACCCCAGAGAG+AGG | + | chr8_1:43101219-43101238 | None:intergenic | 45.0% | |
| GCGACTCTAAATCATCCCTA+CGG | + | chr8_1:43101529-43101548 | None:intergenic | 45.0% | |
| ! | AGGGATGATTTAGAGTCGCT+TGG | - | chr8_1:43101530-43101549 | Msa1195260:intron | 45.0% |
| ! | GGTATTTCTGCAGTCTACCT+TGG | - | chr8_1:43101651-43101670 | Msa1195260:intron | 45.0% |
| ! | CAAATTCTGAGGGATAGCCA+CGG | + | chr8_1:43101857-43101876 | None:intergenic | 45.0% |
| TCCATTATTGTCGGTCACTG+AGG | - | chr8_1:43101886-43101905 | Msa1195260:intron | 45.0% | |
| ACCTCAGTGACCGACAATAA+TGG | + | chr8_1:43101890-43101909 | None:intergenic | 45.0% | |
| CCAAACCTTCACGGATGAAT+AGG | + | chr8_1:43101959-43101978 | None:intergenic | 45.0% | |
| CCTATTCATCCGTGAAGGTT+TGG | - | chr8_1:43101956-43101975 | Msa1195260:intron | 45.0% | |
| AAACAAGGCCCAAACCTTCA+CGG | + | chr8_1:43101968-43101987 | None:intergenic | 45.0% | |
| TCACTTACAATACCACGGGA+AGG | + | chr8_1:43102227-43102246 | None:intergenic | 45.0% | |
| TCCCGTGGTATTGTAAGTGA+TGG | - | chr8_1:43102227-43102246 | Msa1195260:intron | 45.0% | |
| TGCTGTCTCATTACGTTAGC+TGG | - | chr8_1:43102252-43102271 | Msa1195260:intron | 45.0% | |
| TCAGCATTTGCAGAAGCTAG+CGG | + | chr8_1:43102367-43102386 | None:intergenic | 45.0% | |
| CTAGCTTCTGCAAATGCTGA+TGG | - | chr8_1:43102367-43102386 | Msa1195260:intron | 45.0% | |
| TTAATGTGGTGCCTCTGTGT+AGG | - | chr8_1:43102557-43102576 | Msa1195260:CDS | 45.0% | |
| !! | TGTGTAGGTGGTGGAAAAGA+TGG | - | chr8_1:43102572-43102591 | Msa1195260:CDS | 45.0% |
| !! | TAGGTGGTGGAAAAGATGGT+AGG | - | chr8_1:43102576-43102595 | Msa1195260:CDS | 45.0% |
| AAACTTGAATCCAGCGTGAG+AGG | + | chr8_1:43103008-43103027 | None:intergenic | 45.0% | |
| ! | CTCACGCTGGATTCAAGTTT+AGG | - | chr8_1:43103008-43103027 | Msa1195260:intron | 45.0% |
| ! | CATTTTCACAAAGTGCGGAG+TGG | - | chr8_1:43103249-43103268 | Msa1195260:intron | 45.0% |
| GCTTACATGTGAGACTGGAA+TGG | - | chr8_1:43103668-43103687 | Msa1195260:five_prime_UTR | 45.0% | |
| !! | ATTTGATTATTAATTAATTA+AGG | + | chr8_1:43098657-43098676 | None:intergenic | 5.0% |
| !!! | TATAATTTTTTTAGATAATT+TGG | - | chr8_1:43100954-43100973 | Msa1195260:intron | 5.0% |
| GAATGTGAAATGGTCCGGTG+TGG | - | chr8_1:43099960-43099979 | Msa1195260:intron | 50.0% | |
| GTTGTACTCTCCTTCCACAC+CGG | + | chr8_1:43099977-43099996 | None:intergenic | 50.0% | |
| TTTCTGCAGTCTACCTTGGC+AGG | - | chr8_1:43101655-43101674 | Msa1195260:intron | 50.0% | |
| TTCTGCAGTCTACCTTGGCA+GGG | - | chr8_1:43101656-43101675 | Msa1195260:intron | 50.0% | |
| CGTGACCTATTCATCCGTGA+AGG | - | chr8_1:43101951-43101970 | Msa1195260:intron | 50.0% | |
| ! | TGTTCTTGCCTTGTTGCTCC+AGG | - | chr8_1:43102134-43102153 | Msa1195260:CDS | 50.0% |
| ACTGGAATCCTGGAGCAACA+AGG | + | chr8_1:43102145-43102164 | None:intergenic | 50.0% | |
| CTTACAATACCACGGGAAGG+AGG | + | chr8_1:43102224-43102243 | None:intergenic | 50.0% | |
| ! | GCAAATGCTGATGGACAGTC+AGG | - | chr8_1:43102376-43102395 | Msa1195260:intron | 50.0% |
| ! | CTTTTCCACCACCTACACAG+AGG | + | chr8_1:43102571-43102590 | None:intergenic | 50.0% |
| TTCGGTCAAGTGGATCTGCA+AGG | - | chr8_1:43102919-43102938 | Msa1195260:intron | 50.0% | |
| GAGCACAACCGAGTATCATC+TGG | - | chr8_1:43103083-43103102 | Msa1195260:intron | 50.0% | |
| ACAGTAGAGAGAAACGCGGT+GGG | + | chr8_1:43103612-43103631 | None:intergenic | 50.0% | |
| TACAGTAGAGAGAAACGCGG+TGG | + | chr8_1:43103613-43103632 | None:intergenic | 50.0% | |
| GACTGGAATGGAGCGAGTAA+CGG | - | chr8_1:43103680-43103699 | Msa1195260:five_prime_UTR | 50.0% | |
| ACTGGAATGGAGCGAGTAAC+GGG | - | chr8_1:43103681-43103700 | Msa1195260:five_prime_UTR | 50.0% | |
| GTGAAATGGTCCGGTGTGGA+AGG | - | chr8_1:43099964-43099983 | Msa1195260:intron | 55.0% | |
| CCTGCTTTCAATCCCTGCCA+AGG | + | chr8_1:43101671-43101690 | None:intergenic | 55.0% | |
| CCTTGGCAGGGATTGAAAGC+AGG | - | chr8_1:43101668-43101687 | Msa1195260:intron | 55.0% | |
| ! | CTTTGCTAGTCTCTCTGCCG+TGG | - | chr8_1:43101837-43101856 | Msa1195260:intron | 55.0% |
| AATACCACGGGAAGGAGGAG+TGG | + | chr8_1:43102219-43102238 | None:intergenic | 55.0% | |
| CACTTACAGGGTCTTGCTGC+TGG | - | chr8_1:43102325-43102344 | Msa1195260:CDS | 55.0% | |
| ATGTGGTGCCTCTGTGTAGG+TGG | - | chr8_1:43102560-43102579 | Msa1195260:CDS | 55.0% | |
| CTTCGTCTGATCCCACTCGA+AGG | - | chr8_1:43102612-43102631 | Msa1195260:intron | 55.0% | |
| CCAGAGGTTCTCCTTCGAGT+GGG | + | chr8_1:43102626-43102645 | None:intergenic | 55.0% | |
| TCCAGAGGTTCTCCTTCGAG+TGG | + | chr8_1:43102627-43102646 | None:intergenic | 55.0% | |
| TCAAGTGGATCTGCAAGGCG+AGG | - | chr8_1:43102924-43102943 | Msa1195260:intron | 55.0% | |
| CACTGCCAACAGCTGCATCA+CGG | + | chr8_1:43102965-43102984 | None:intergenic | 55.0% | |
| TGCAGCTGTTGGCAGTGAGA+CGG | - | chr8_1:43102968-43102987 | Msa1195260:intron | 55.0% | |
| GGAGCAGTCCGTAAAAGCTC+TGG | - | chr8_1:43103029-43103048 | Msa1195260:intron | 55.0% | |
| TCACAAAGTGCGGAGTGGAG+TGG | - | chr8_1:43103254-43103273 | Msa1195260:intron | 55.0% | |
| CTGGAATGGAGCGAGTAACG+GGG | - | chr8_1:43103682-43103701 | Msa1195260:five_prime_UTR | 55.0% | |
| CACGCCTCCCTAAACCCATG+AGG | + | chr8_1:43100248-43100267 | None:intergenic | 60.0% | |
| CTTTGCGCGGGGAACTTTCC+TGG | - | chr8_1:43100716-43100735 | Msa1195260:intron | 60.0% | |
| CCAGAGAGAGGGAGAGAGTC+GGG | + | chr8_1:43101207-43101226 | None:intergenic | 60.0% | |
| CCCAGAGAGAGGGAGAGAGT+CGG | + | chr8_1:43101208-43101227 | None:intergenic | 60.0% | |
| CCGACTCTCTCCCTCTCTCT+GGG | - | chr8_1:43101205-43101224 | Msa1195260:intron | 60.0% | |
| CGACTCTCTCCCTCTCTCTG+GGG | - | chr8_1:43101206-43101225 | Msa1195260:intron | 60.0% | |
| CTTGCTGCTGGACCGAGTTC+TGG | - | chr8_1:43102337-43102356 | Msa1195260:CDS | 60.0% | |
| GCTAGCGGCAGACCAGAACT+CGG | + | chr8_1:43102352-43102371 | None:intergenic | 60.0% | |
| TGGTGCCTCTGTGTAGGTGG+TGG | - | chr8_1:43102563-43102582 | Msa1195260:CDS | 60.0% | |
| CCCACTCGAAGGAGAACCTC+TGG | - | chr8_1:43102623-43102642 | Msa1195260:intron | 60.0% | |
| AGCAGCCGTGATGCAGCTGT+TGG | - | chr8_1:43102957-43102976 | Msa1195260:intron | 60.0% | |
| AGCGTGAGAGGACGAGAGGA+GGG | + | chr8_1:43102996-43103015 | None:intergenic | 60.0% | |
| ATCCAGCGTGAGAGGACGAG+AGG | + | chr8_1:43103000-43103019 | None:intergenic | 60.0% | |
| CCCGACTCTCTCCCTCTCTC+TGG | - | chr8_1:43101204-43101223 | Msa1195260:intron | 65.0% | |
| ATCGCCACTCCTCCTTCCCG+TGG | - | chr8_1:43102212-43102231 | Msa1195260:intron | 65.0% | |
| CAGCGTGAGAGGACGAGAGG+AGG | + | chr8_1:43102997-43103016 | None:intergenic | 65.0% | |
| CTCCTCTCGTCCTCTCACGC+TGG | - | chr8_1:43102995-43103014 | Msa1195260:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 43098616 | 43103933 | 43098616 | ID=Msa1195260;Name=Msa1195260 |
| chr8_1 | mRNA | 43098616 | 43103933 | 43098616 | ID=Msa1195260-mRNA-1;Parent=Msa1195260;Name=Msa1195260-mRNA-1;_AED=0.13;_eAED=0.13;_QI=286|1|1|1|1|1|14|740|474 |
| chr8_1 | exon | 43098616 | 43099649 | 43098616 | ID=Msa1195260-mRNA-1:exon:13963;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43099825 | 43099970 | 43099825 | ID=Msa1195260-mRNA-1:exon:13962;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43100152 | 43100215 | 43100152 | ID=Msa1195260-mRNA-1:exon:13961;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43100311 | 43100393 | 43100311 | ID=Msa1195260-mRNA-1:exon:13960;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43100577 | 43100703 | 43100577 | ID=Msa1195260-mRNA-1:exon:13959;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43100801 | 43100885 | 43100801 | ID=Msa1195260-mRNA-1:exon:13958;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43100967 | 43101030 | 43100967 | ID=Msa1195260-mRNA-1:exon:13957;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43101118 | 43101179 | 43101118 | ID=Msa1195260-mRNA-1:exon:13956;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43102108 | 43102175 | 43102108 | ID=Msa1195260-mRNA-1:exon:13955;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43102274 | 43102369 | 43102274 | ID=Msa1195260-mRNA-1:exon:13954;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43102451 | 43102599 | 43102451 | ID=Msa1195260-mRNA-1:exon:13953;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43102711 | 43102780 | 43102711 | ID=Msa1195260-mRNA-1:exon:13952;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43103445 | 43103485 | 43103445 | ID=Msa1195260-mRNA-1:exon:13951;Parent=Msa1195260-mRNA-1 |
| chr8_1 | exon | 43103572 | 43103933 | 43103572 | ID=Msa1195260-mRNA-1:exon:13950;Parent=Msa1195260-mRNA-1 |
| chr8_1 | five_prime_UTR | 43103648 | 43103933 | 43103648 | ID=Msa1195260-mRNA-1:five_prime_utr;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43103572 | 43103647 | 43103572 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43103445 | 43103485 | 43103445 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43102711 | 43102780 | 43102711 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43102451 | 43102599 | 43102451 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43102274 | 43102369 | 43102274 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43102108 | 43102175 | 43102108 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43101118 | 43101179 | 43101118 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43100967 | 43101030 | 43100967 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43100801 | 43100885 | 43100801 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43100577 | 43100703 | 43100577 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43100311 | 43100393 | 43100311 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43100152 | 43100215 | 43100152 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43099825 | 43099970 | 43099825 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | CDS | 43099356 | 43099649 | 43099356 | ID=Msa1195260-mRNA-1:cds;Parent=Msa1195260-mRNA-1 |
| chr8_1 | three_prime_UTR | 43098616 | 43099355 | 43098616 | ID=Msa1195260-mRNA-1:three_prime_utr;Parent=Msa1195260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
