Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275740 | sp|Q9CAI5|CKL2_ARATH | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275740 | G7LI85 | 99.789 | 474 | 1 | 0 | 1 | 474 | 1 | 474 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1233430 | Msa1275740 | 0.845334 | 4.334096e-59 | -8.615850e-47 |
| Msa1195260 | Msa1275740 | 0.843730 | 1.170432e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275740 | MtrunA17_Chr8g0342821 | 99.789 | 474 | 1 | 0 | 1 | 474 | 1 | 474 | 0.0 | 974 |
| Msa1275740 | MtrunA17_Chr2g0329981 | 83.648 | 477 | 73 | 5 | 1 | 474 | 1 | 475 | 0.0 | 811 |
| Msa1275740 | MtrunA17_Chr4g0071031 | 75.523 | 478 | 89 | 7 | 1 | 474 | 1 | 454 | 0.0 | 692 |
| Msa1275740 | MtrunA17_Chr2g0299661 | 68.936 | 470 | 141 | 4 | 1 | 469 | 1 | 466 | 0.0 | 655 |
| Msa1275740 | MtrunA17_Chr1g0183631 | 59.789 | 475 | 156 | 8 | 1 | 465 | 1 | 450 | 0.0 | 545 |
| Msa1275740 | MtrunA17_Chr7g0261501 | 77.538 | 325 | 64 | 3 | 1 | 318 | 1 | 323 | 0.0 | 541 |
| Msa1275740 | MtrunA17_Chr1g0166821 | 79.180 | 317 | 63 | 2 | 1 | 314 | 2 | 318 | 0.0 | 540 |
| Msa1275740 | MtrunA17_Chr1g0187571 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 520 |
| Msa1275740 | MtrunA17_Chr6g0486611 | 77.926 | 299 | 65 | 1 | 1 | 298 | 1 | 299 | 1.01e-178 | 507 |
| Msa1275740 | MtrunA17_Chr8g0390211 | 76.589 | 299 | 69 | 1 | 1 | 298 | 1 | 299 | 1.35e-174 | 496 |
| Msa1275740 | MtrunA17_Chr3g0140071 | 65.964 | 332 | 106 | 3 | 1 | 326 | 1 | 331 | 2.38e-162 | 466 |
| Msa1275740 | MtrunA17_Chr1g0167261 | 71.000 | 300 | 84 | 2 | 1 | 297 | 2 | 301 | 1.62e-161 | 460 |
| Msa1275740 | MtrunA17_Chr1g0146151 | 66.144 | 319 | 107 | 1 | 1 | 318 | 1 | 319 | 3.54e-160 | 460 |
| Msa1275740 | MtrunA17_Chr7g0214531 | 37.276 | 279 | 157 | 6 | 9 | 272 | 37 | 312 | 5.20e-57 | 199 |
| Msa1275740 | MtrunA17_Chr3g0140431 | 38.951 | 267 | 151 | 6 | 9 | 266 | 38 | 301 | 6.02e-57 | 198 |
| Msa1275740 | MtrunA17_Chr1g0146301 | 37.828 | 267 | 154 | 6 | 9 | 266 | 124 | 387 | 2.30e-56 | 198 |
| Msa1275740 | MtrunA17_Chr1g0213321 | 37.956 | 274 | 157 | 6 | 9 | 272 | 119 | 389 | 7.85e-56 | 197 |
| Msa1275740 | MtrunA17_Chr7g0253211 | 38.542 | 288 | 158 | 7 | 4 | 275 | 317 | 601 | 2.38e-55 | 198 |
| Msa1275740 | MtrunA17_Chr8g0340491 | 36.957 | 276 | 151 | 8 | 9 | 266 | 128 | 398 | 1.18e-50 | 183 |
| Msa1275740 | MtrunA17_Chr5g0405421 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.11e-13 | 73.2 |
| Msa1275740 | MtrunA17_Chr3g0107011 | 27.197 | 239 | 120 | 11 | 1 | 213 | 5 | 215 | 9.20e-12 | 67.0 |
| Msa1275740 | MtrunA17_Chr3g0123141 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 4.75e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275740 | AT1G72710.1 | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| Msa1275740 | AT4G26100.1 | 69.979 | 473 | 112 | 9 | 1 | 470 | 1 | 446 | 0.0 | 652 |
| Msa1275740 | AT5G57015.1 | 69.538 | 476 | 101 | 9 | 1 | 474 | 1 | 434 | 0.0 | 644 |
| Msa1275740 | AT2G19470.1 | 69.533 | 407 | 102 | 5 | 1 | 404 | 1 | 388 | 0.0 | 573 |
| Msa1275740 | AT1G03930.1 | 60.970 | 474 | 173 | 6 | 1 | 467 | 1 | 469 | 0.0 | 542 |
| Msa1275740 | AT5G44100.1 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| Msa1275740 | AT5G44100.2 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| Msa1275740 | AT3G23340.1 | 64.096 | 415 | 135 | 6 | 1 | 414 | 1 | 402 | 0.0 | 531 |
| Msa1275740 | AT4G28540.1 | 73.620 | 326 | 78 | 2 | 1 | 318 | 5 | 330 | 0.0 | 520 |
| Msa1275740 | AT4G14340.1 | 63.260 | 411 | 137 | 5 | 1 | 410 | 7 | 404 | 0.0 | 519 |
| Msa1275740 | AT5G43320.1 | 56.701 | 485 | 185 | 9 | 1 | 469 | 1 | 476 | 0.0 | 519 |
| Msa1275740 | AT4G14340.2 | 78.788 | 297 | 62 | 1 | 1 | 296 | 7 | 303 | 0.0 | 511 |
| Msa1275740 | AT1G04440.1 | 69.940 | 336 | 100 | 1 | 1 | 335 | 1 | 336 | 3.50e-179 | 510 |
| Msa1275740 | AT5G43320.2 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 3.95e-177 | 501 |
| Msa1275740 | AT5G43320.3 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 3.95e-177 | 501 |
| Msa1275740 | AT4G28880.3 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.46e-176 | 500 |
| Msa1275740 | AT4G28880.2 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.46e-176 | 500 |
| Msa1275740 | AT4G28880.1 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.46e-176 | 500 |
| Msa1275740 | AT4G28880.4 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 6.46e-176 | 500 |
| Msa1275740 | AT3G23340.2 | 63.291 | 395 | 131 | 6 | 21 | 414 | 7 | 388 | 6.25e-175 | 498 |
| Msa1275740 | AT4G28860.2 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 2.46e-172 | 489 |
| Msa1275740 | AT4G28860.1 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 1.23e-171 | 489 |
| Msa1275740 | AT4G08800.1 | 68.525 | 305 | 63 | 3 | 1 | 304 | 1 | 273 | 3.19e-153 | 437 |
| Msa1275740 | AT2G25760.2 | 39.146 | 281 | 153 | 6 | 4 | 266 | 100 | 380 | 3.82e-61 | 212 |
| Msa1275740 | AT2G25760.1 | 38.434 | 281 | 152 | 7 | 4 | 266 | 100 | 377 | 5.54e-58 | 203 |
| Msa1275740 | AT3G03940.1 | 38.408 | 289 | 159 | 7 | 4 | 276 | 133 | 418 | 4.18e-56 | 198 |
| Msa1275740 | AT5G18190.2 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 5.17e-56 | 198 |
| Msa1275740 | AT5G18190.1 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 5.17e-56 | 198 |
| Msa1275740 | AT3G13670.1 | 36.042 | 283 | 163 | 6 | 9 | 276 | 137 | 416 | 2.04e-54 | 194 |
| Msa1275740 | AT2G17890.1 | 25.893 | 224 | 150 | 8 | 7 | 222 | 106 | 321 | 7.62e-13 | 71.2 |
| Msa1275740 | AT3G50530.1 | 25.532 | 235 | 135 | 8 | 5 | 218 | 144 | 359 | 5.79e-12 | 68.6 |
| Msa1275740 | AT5G39440.1 | 29.245 | 212 | 128 | 10 | 9 | 212 | 19 | 216 | 2.51e-11 | 66.2 |
| Msa1275740 | AT3G06030.1 | 26.941 | 219 | 134 | 7 | 8 | 212 | 67 | 273 | 6.01e-11 | 65.1 |
| Msa1275740 | AT3G29160.3 | 29.577 | 213 | 127 | 11 | 9 | 212 | 20 | 218 | 6.53e-11 | 64.3 |
| Msa1275740 | AT4G36070.2 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 8.81e-11 | 64.7 |
| Msa1275740 | AT4G36070.1 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.33e-11 | 64.3 |
Find 148 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCAAACATAAATAATT+TGG | 0.143188 | 8_3:+9891334 | Msa1275740:CDS |
| TTTCTTTATTGTATACTTAT+AGG | 0.154065 | 8_3:-9891553 | None:intergenic |
| ATTTGATTATTAATTAATTA+AGG | 0.210566 | 8_3:-9886876 | None:intergenic |
| GAAGAAGAAAAGGGTATATC+TGG | 0.226962 | 8_3:-9887039 | None:intergenic |
| GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 8_3:+9888459 | Msa1275740:CDS |
| TAACACATGCATACAATTAA+TGG | 0.233781 | 8_3:-9892062 | None:intergenic |
| ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 8_3:+9888256 | Msa1275740:CDS |
| TTCTTCATTTGTCTGAATAT+TGG | 0.261094 | 8_3:-9887289 | None:intergenic |
| GGAAAAGATGGTAGGAATAT+TGG | 0.271839 | 8_3:+9890806 | Msa1275740:CDS |
| CATATCATTGTGAACTATAT+CGG | 0.303394 | 8_3:+9891717 | Msa1275740:three_prime_UTR |
| CACATGTAAAGCTTGATCTT+TGG | 0.312606 | 8_3:-9891877 | None:intergenic |
| AAAATTGGTAGCGGATCTTT+TGG | 0.312915 | 8_3:+9887163 | Msa1275740:CDS |
| CTCACGCTGGATTCAAGTTT+AGG | 0.327718 | 8_3:+9891230 | Msa1275740:CDS |
| TATCTGGGAAATGCTGAAAA+AGG | 0.327889 | 8_3:-9887023 | None:intergenic |
| CTTGCTGCTGGACCGAGTTC+TGG | 0.338183 | 8_3:+9890559 | Msa1275740:CDS |
| ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 8_3:+9888460 | Msa1275740:CDS |
| AACAAAACTAGCCTCGTAAA+AGG | 0.358968 | 8_3:+9891596 | Msa1275740:three_prime_UTR |
| GAAAAGATGGTAGGAATATT+GGG | 0.370564 | 8_3:+9890807 | Msa1275740:CDS |
| ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 8_3:+9889632 | Msa1275740:CDS |
| ACAATAAAGAAAATATGTTT+TGG | 0.374535 | 8_3:+9891564 | Msa1275740:three_prime_UTR |
| ATTAAACCCTAATTGAAAAT+CGG | 0.386169 | 8_3:-9887103 | None:intergenic |
| ACCTCAGTGACCGACAATAA+TGG | 0.388781 | 8_3:-9890109 | None:intergenic |
| TTTCTGCAGTCTACCTTGGC+AGG | 0.394985 | 8_3:+9889877 | Msa1275740:intron |
| TATCGAGTTCGAATTTCTTT+CGG | 0.396736 | 8_3:+9891123 | Msa1275740:CDS |
| CACTTACAGGGTCTTGCTGC+TGG | 0.397023 | 8_3:+9890547 | Msa1275740:intron |
| CTTCATACTTCCATTATTGT+CGG | 0.399001 | 8_3:+9890099 | Msa1275740:CDS |
| TCAAGCTTTACATGTGAGAT+TGG | 0.405387 | 8_3:+9891884 | Msa1275740:three_prime_UTR |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 8_3:-9890382 | None:intergenic |
| CCAAACCTTCACGGATGAAT+AGG | 0.413827 | 8_3:-9890178 | None:intergenic |
| GGTTTAATGGAACCTCGAAT+TGG | 0.417126 | 8_3:+9887118 | Msa1275740:exon |
| ATATCATTGTGAACTATATC+GGG | 0.417397 | 8_3:+9891718 | Msa1275740:three_prime_UTR |
| ATGCCATAAAAGTACCTATA+GGG | 0.418213 | 8_3:-9888656 | None:intergenic |
| TCAGAATTTACAAGGAAGAA+AGG | 0.421192 | 8_3:-9891436 | None:intergenic |
| ATTGGAATGGAGCGAGTAAC+GGG | 0.426563 | 8_3:+9891902 | Msa1275740:three_prime_UTR |
| AATTTGGATTCAACGCTTAG+AGG | 0.429713 | 8_3:+9891350 | Msa1275740:CDS |
| GCTAGTATGAATACTCATCT+TGG | 0.435171 | 8_3:+9889626 | Msa1275740:CDS |
| AAGATTCCATCATTAGCAAT+AGG | 0.437123 | 8_3:-9890869 | None:intergenic |
| TTGGAAATAAGTTCCGTCTT+GGG | 0.443286 | 8_3:+9887137 | Msa1275740:CDS |
| CGTCATCGTAGAAGAAGAAA+AGG | 0.445616 | 8_3:-9887049 | None:intergenic |
| GACAAAATATCTTGTGTAAG+TGG | 0.446487 | 8_3:+9892037 | Msa1275740:three_prime_UTR |
| ACACCGGACCATTTCACATT+CGG | 0.447768 | 8_3:-9888180 | None:intergenic |
| CACCATAGCATCTTTAGATC+CGG | 0.452993 | 8_3:-9890927 | None:intergenic |
| ATACAACAATTGAGGGTGCT+TGG | 0.454552 | 8_3:-9888004 | None:intergenic |
| TCTTATGCTTGCCGATCAAA+TGG | 0.457248 | 8_3:+9888299 | Msa1275740:CDS |
| AGTTTGATTATGTCTTCGAT+TGG | 0.461696 | 8_3:+9890384 | Msa1275740:CDS |
| TTTGCTTCATACAACAATTG+AGG | 0.464158 | 8_3:-9888012 | None:intergenic |
| TCTGGACCTATTGCTAATGA+TGG | 0.466720 | 8_3:+9890863 | Msa1275740:CDS |
| TTGCTTCATACAACAATTGA+GGG | 0.471529 | 8_3:-9888011 | None:intergenic |
| ATCCTTGTGATGGATTTACT+TGG | 0.473724 | 8_3:+9888219 | Msa1275740:CDS |
| CCACTTACAAATGACTTAAC+CGG | 0.474625 | 8_3:+9890908 | Msa1275740:CDS |
| GAAAGTTTCTACATCTATTG+AGG | 0.478508 | 8_3:+9889949 | Msa1275740:CDS |
| CTGGAATACCGAATGTGAAA+TGG | 0.479886 | 8_3:+9888172 | Msa1275740:CDS |
| GCAAATGCTGATGGACAGTC+AGG | 0.482487 | 8_3:+9890598 | Msa1275740:CDS |
| GTGTTTGTAATTTGTTGTAA+TGG | 0.486115 | 8_3:+9891986 | Msa1275740:three_prime_UTR |
| CCCACTCGAAGGAGAACCTC+TGG | 0.486536 | 8_3:+9890845 | Msa1275740:CDS |
| CCGGTTAAGTCATTTGTAAG+TGG | 0.488016 | 8_3:-9890908 | None:intergenic |
| ATTGGAAATAAGTTCCGTCT+TGG | 0.488327 | 8_3:+9887136 | Msa1275740:CDS |
| GAGCACAACCGAGTATCATC+TGG | 0.489104 | 8_3:+9891305 | Msa1275740:CDS |
| CGGTTAAGTCATTTGTAAGT+GGG | 0.492030 | 8_3:-9890907 | None:intergenic |
| CTAGCTTCTGCAAATGCTGA+TGG | 0.497772 | 8_3:+9890589 | Msa1275740:CDS |
| AGGGATGATTTAGAGTCGCT+TGG | 0.498396 | 8_3:+9889752 | Msa1275740:CDS |
| GGTATTTCTGCAGTCTACCT+TGG | 0.499822 | 8_3:+9889873 | Msa1275740:intron |
| TCGAATTTCTTTCGGTCAAG+TGG | 0.500221 | 8_3:+9891131 | Msa1275740:CDS |
| CACATCAGCATATTCCCTAT+AGG | 0.500725 | 8_3:+9888642 | Msa1275740:CDS |
| TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 8_3:+9888233 | Msa1275740:CDS |
| CGGAACTTATTTCCAATTCG+AGG | 0.504125 | 8_3:-9887130 | None:intergenic |
| TGTTTCTTCCAGATGATACT+CGG | 0.516048 | 8_3:-9891313 | None:intergenic |
| AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 8_3:+9888453 | Msa1275740:CDS |
| TAGGTGTACATCATTGACTT+TGG | 0.518918 | 8_3:+9888593 | Msa1275740:intron |
| TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 8_3:-9888243 | None:intergenic |
| CTCCTCTCGTCCTCTCACGC+TGG | 0.525433 | 8_3:+9891217 | Msa1275740:CDS |
| AAGAAGAAAAGGGTATATCT+GGG | 0.527099 | 8_3:-9887038 | None:intergenic |
| AAGAAAACAAATGATAGTAA+AGG | 0.529240 | 8_3:-9891663 | None:intergenic |
| TCTTCCTTGTAAATTCTGAA+AGG | 0.531260 | 8_3:+9891440 | Msa1275740:three_prime_UTR |
| AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 8_3:-9888456 | None:intergenic |
| GGAGCAGTCCGTAAAAGCTC+TGG | 0.533818 | 8_3:+9891251 | Msa1275740:CDS |
| AACCGGATCTAAAGATGCTA+TGG | 0.540198 | 8_3:+9890925 | Msa1275740:CDS |
| TAAACCTTTCAGAATTTACA+AGG | 0.541737 | 8_3:-9891444 | None:intergenic |
| AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 8_3:+9888452 | Msa1275740:CDS |
| GCGTTTCTCTACTGTAATTG+TGG | 0.545672 | 8_3:+9891837 | Msa1275740:three_prime_UTR |
| TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 8_3:-9888242 | None:intergenic |
| TTCTGCAGTCTACCTTGGCA+GGG | 0.547539 | 8_3:+9889878 | Msa1275740:intron |
| AAACAAGGCCCAAACCTTCA+CGG | 0.553845 | 8_3:-9890187 | None:intergenic |
| CAGCGTGAGAGGACGAGAGG+AGG | 0.553851 | 8_3:-9891216 | None:intergenic |
| CGTGACCTATTCATCCGTGA+AGG | 0.553976 | 8_3:+9890173 | Msa1275740:CDS |
| GATTGGAATGGAGCGAGTAA+CGG | 0.554737 | 8_3:+9891901 | Msa1275740:three_prime_UTR |
| CAGAGAGAATAAGAATCTGA+CGG | 0.555069 | 8_3:+9889589 | Msa1275740:intron |
| AGCGTGAGAGGACGAGAGGA+GGG | 0.556937 | 8_3:-9891215 | None:intergenic |
| GAAGTATGAAGCAAATTCTG+AGG | 0.560679 | 8_3:-9890087 | None:intergenic |
| TGTGTAGGTGGTGGAAAAGA+TGG | 0.562910 | 8_3:+9890794 | Msa1275740:intron |
| GTGAAATGGTCCGGTGTGGA+AGG | 0.568781 | 8_3:+9888186 | Msa1275740:CDS |
| CTTTACATGTGAGATTGGAA+TGG | 0.571790 | 8_3:+9891889 | Msa1275740:three_prime_UTR |
| AAACTTGAATCCAGCGTGAG+AGG | 0.575553 | 8_3:-9891227 | None:intergenic |
| TCCAGAGGTTCTCCTTCGAG+TGG | 0.576149 | 8_3:-9890846 | None:intergenic |
| AAGTTCACATATCATGTCAT+CGG | 0.576819 | 8_3:+9891283 | Msa1275740:CDS |
| AGAGTACAACATCCTTGTGA+TGG | 0.579202 | 8_3:+9888209 | Msa1275740:CDS |
| AGCAGCCGTGATGCAGCTGT+TGG | 0.579930 | 8_3:+9891179 | Msa1275740:CDS |
| ATCATTAGCAATAGGTCCAG+AGG | 0.580010 | 8_3:-9890861 | None:intergenic |
| AGGGAAACCCACCATTTGAT+CGG | 0.583445 | 8_3:-9888310 | None:intergenic |
| CCTTGGCAGGGATTGAAAGC+AGG | 0.584404 | 8_3:+9889890 | Msa1275740:CDS |
| AGAGAGAATAAGAATCTGAC+GGG | 0.585309 | 8_3:+9889590 | Msa1275740:intron |
| CTTTGCTAGTCTCTCTGCCG+TGG | 0.586144 | 8_3:+9890059 | Msa1275740:intron |
| CTTTAATAGAGCAAAGCCGT+AGG | 0.589565 | 8_3:+9889732 | Msa1275740:intron |
| TTGATCGGCAAGCATAAGAA+CGG | 0.592423 | 8_3:-9888295 | None:intergenic |
| ATACCGAATGTGAAATGGTC+CGG | 0.593452 | 8_3:+9888177 | Msa1275740:CDS |
| ACCATCACTTACAATACCAC+GGG | 0.602147 | 8_3:-9890450 | None:intergenic |
| TTTAATAGAGCAAAGCCGTA+GGG | 0.604857 | 8_3:+9889733 | Msa1275740:intron |
| CACCATCACTTACAATACCA+CGG | 0.605886 | 8_3:-9890451 | None:intergenic |
| GGTTAAGTCATTTGTAAGTG+GGG | 0.606360 | 8_3:-9890906 | None:intergenic |
| GTCTGCATTTAAACGATGAG+AGG | 0.609688 | 8_3:+9891381 | Msa1275740:CDS |
| CTTCGTCTGATCCCACTCGA+AGG | 0.610986 | 8_3:+9890834 | Msa1275740:CDS |
| AAGCTGTATAAAATACTGCA+AGG | 0.612393 | 8_3:+9888033 | Msa1275740:CDS |
| ATCGCCACTCCTCCTTCCCG+TGG | 0.613928 | 8_3:+9890434 | Msa1275740:CDS |
| TCACAAAGTGCGGAGTGGAG+TGG | 0.616198 | 8_3:+9891476 | Msa1275740:three_prime_UTR |
| CCTGCTTTCAATCCCTGCCA+AGG | 0.616580 | 8_3:-9889890 | None:intergenic |
| CCAGAGGTTCTCCTTCGAGT+GGG | 0.619887 | 8_3:-9890845 | None:intergenic |
| ATCCAGCGTGAGAGGACGAG+AGG | 0.620493 | 8_3:-9891219 | None:intergenic |
| TCCATTATTGTCGGTCACTG+AGG | 0.621842 | 8_3:+9890108 | Msa1275740:CDS |
| TTCGGTCAAGTGGATCTGCA+AGG | 0.626728 | 8_3:+9891141 | Msa1275740:CDS |
| TGCAGCTGTTGGCAGTGAGA+CGG | 0.627439 | 8_3:+9891190 | Msa1275740:CDS |
| ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 8_3:+9888463 | Msa1275740:CDS |
| CTTACAATACCACGGGAAGG+AGG | 0.631667 | 8_3:-9890443 | None:intergenic |
| AATACCACGGGAAGGAGGAG+TGG | 0.634617 | 8_3:-9890438 | None:intergenic |
| TCTGCATTTAAACGATGAGA+GGG | 0.635819 | 8_3:+9891382 | Msa1275740:CDS |
| AAGTATGAAGCAAATTCTGA+GGG | 0.637275 | 8_3:-9890086 | None:intergenic |
| GCGACTCTAAATCATCCCTA+CGG | 0.637624 | 8_3:-9889748 | None:intergenic |
| TCAAGTGGATCTGCAAGGCG+AGG | 0.638769 | 8_3:+9891146 | Msa1275740:CDS |
| TCAGCATTTGCAGAAGCTAG+CGG | 0.639218 | 8_3:-9890586 | None:intergenic |
| GTCATCGTAGAAGAAGAAAA+GGG | 0.644208 | 8_3:-9887048 | None:intergenic |
| TAGGTGGTGGAAAAGATGGT+AGG | 0.644820 | 8_3:+9890798 | Msa1275740:intron |
| GCTAGCGGCAGACCAGAACT+CGG | 0.647842 | 8_3:-9890571 | None:intergenic |
| GTTGTACTCTCCTTCCACAC+CGG | 0.649985 | 8_3:-9888196 | None:intergenic |
| CACTGCCAACAGCTGCATCA+CGG | 0.650486 | 8_3:-9891184 | None:intergenic |
| TATCATTGTGAACTATATCG+GGG | 0.650629 | 8_3:+9891719 | Msa1275740:three_prime_UTR |
| ATCATTGTGAACTATATCGG+GGG | 0.657737 | 8_3:+9891720 | Msa1275740:three_prime_UTR |
| GGCCAAGTAAATCCATCACA+AGG | 0.666479 | 8_3:-9888221 | None:intergenic |
| TCACTTACAATACCACGGGA+AGG | 0.675431 | 8_3:-9890446 | None:intergenic |
| CAAATTCTGAGGGATAGCCA+CGG | 0.686783 | 8_3:-9890076 | None:intergenic |
| ACAACAAATTACAAACACAA+CGG | 0.687735 | 8_3:-9891981 | None:intergenic |
| TTGGAATGGAGCGAGTAACG+GGG | 0.694339 | 8_3:+9891903 | Msa1275740:three_prime_UTR |
| ATTACAGTAGAGAAACGCGG+TGG | 0.699060 | 8_3:-9891832 | None:intergenic |
| TTACAGTAGAGAAACGCGGT+GGG | 0.705585 | 8_3:-9891831 | None:intergenic |
| GAATGTGAAATGGTCCGGTG+TGG | 0.716403 | 8_3:+9888182 | Msa1275740:CDS |
| CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 8_3:-9888467 | None:intergenic |
| AAGATGGTAGGAATATTGGG+TGG | 0.729848 | 8_3:+9890810 | Msa1275740:CDS |
| CTGTATAAAATACTGCAAGG+AGG | 0.737729 | 8_3:+9888036 | Msa1275740:CDS |
| TATGCTTTATATCATCCCTG+AGG | 0.757607 | 8_3:-9891698 | None:intergenic |
| ACAATTACAGTAGAGAAACG+CGG | 0.776517 | 8_3:-9891835 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTCTTTTGAATTTT+TGG | + | chr8_3:9887371-9887390 | Msa1275740:intron | 10.0% |
| !!! | TCCTATTTATATTTTATTTT+TGG | + | chr8_3:9890210-9890229 | Msa1275740:intron | 10.0% |
| !! | TCCAAAAATAAAATATAAAT+AGG | - | chr8_3:9890214-9890233 | None:intergenic | 10.0% |
| !!! | TTAAGTTATTTAATTTTTAG+TGG | + | chr8_3:9890510-9890529 | Msa1275740:intron | 10.0% |
| !!! | TCATTTTCTTTTTCAAAATT+CGG | - | chr8_3:9887338-9887357 | None:intergenic | 15.0% |
| !! | AAATAAAGTAATGATTGATT+AGG | + | chr8_3:9887705-9887724 | Msa1275740:intron | 15.0% |
| !! | ATTTATTCAATTTCTGTAAT+AGG | + | chr8_3:9888256-9888275 | Msa1275740:CDS | 15.0% |
| !!! | TTTTGTAAAATCTATTATCA+TGG | + | chr8_3:9888766-9888785 | Msa1275740:intron | 15.0% |
| !!! | TGAATCCTTTAATATTATTT+TGG | + | chr8_3:9889145-9889164 | Msa1275740:intron | 15.0% |
| !! | GATTACCAAAATAATATTAA+AGG | - | chr8_3:9889153-9889172 | None:intergenic | 15.0% |
| !! | AAAAACTAATTGATACTTAA+TGG | - | chr8_3:9889274-9889293 | None:intergenic | 15.0% |
| !! | GTGAATAAAAAGTTATTAAA+AGG | + | chr8_3:9889368-9889387 | Msa1275740:intron | 15.0% |
| !!! | AATGATTTTAAAAGACATAA+TGG | - | chr8_3:9890021-9890040 | None:intergenic | 15.0% |
| !! | AAAATATAAATAGGAAAACA+AGG | - | chr8_3:9890205-9890224 | None:intergenic | 15.0% |
| !! | TTTCTTTATTGTATACTTAT+AGG | - | chr8_3:9891556-9891575 | None:intergenic | 15.0% |
| !!! | ACAATAAAGAAAATATGTTT+TGG | + | chr8_3:9891564-9891583 | Msa1275740:three_prime_UTR | 15.0% |
| !!! | CAAATTTTTCATTTTCTTAA+CGG | - | chr8_3:9892095-9892114 | None:intergenic | 15.0% |
| !! | ATTAAACCCTAATTGAAAAT+CGG | - | chr8_3:9887106-9887125 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTGAATTTT+AGG | + | chr8_3:9887237-9887256 | Msa1275740:intron | 20.0% |
| !!! | TTTTGTTGTTGTGAATTTTA+GGG | + | chr8_3:9887238-9887257 | Msa1275740:intron | 20.0% |
| !!! | CATTTTCTTTTTCAAAATTC+GGG | - | chr8_3:9887337-9887356 | None:intergenic | 20.0% |
| !!! | TCAATAACAACAAAAGTATT+CGG | - | chr8_3:9887409-9887428 | None:intergenic | 20.0% |
| !! | TAAATTTACGAACTGATATT+TGG | + | chr8_3:9887785-9887804 | Msa1275740:intron | 20.0% |
| !!! | ATTTTTGTTTTGTTTGATTC+AGG | + | chr8_3:9887969-9887988 | Msa1275740:intron | 20.0% |
| !! | AGTTATTATGTTTGTAAGTA+TGG | - | chr8_3:9889110-9889129 | None:intergenic | 20.0% |
| !! | TTGATTGTATACCTATTATA+TGG | - | chr8_3:9889206-9889225 | None:intergenic | 20.0% |
| !! | GAATTTATGCCAATTAAATT+TGG | + | chr8_3:9889392-9889411 | Msa1275740:intron | 20.0% |
| !! | AATAAATAATCGTAAAGACT+AGG | - | chr8_3:9889471-9889490 | None:intergenic | 20.0% |
| !!! | GTTCTTATGTATTTTTTAAG+AGG | + | chr8_3:9889779-9889798 | Msa1275740:CDS | 20.0% |
| !!! | TTATGTATTTTTTAAGAGGA+AGG | + | chr8_3:9889783-9889802 | Msa1275740:CDS | 20.0% |
| !! | TGTCAAATGCTAAATAATAA+AGG | - | chr8_3:9889823-9889842 | None:intergenic | 20.0% |
| !!! | CATTTGACATATCTTTTAAT+TGG | + | chr8_3:9889834-9889853 | Msa1275740:intron | 20.0% |
| !!! | TTTAAAATCATTGTTGATTG+TGG | + | chr8_3:9890029-9890048 | Msa1275740:intron | 20.0% |
| !!! | TTAAAATCATTGTTGATTGT+GGG | + | chr8_3:9890030-9890049 | Msa1275740:intron | 20.0% |
| !!! | TTTTTTCTTTGTCATAGTTT+AGG | + | chr8_3:9890297-9890316 | Msa1275740:intron | 20.0% |
| !! | TAACAAATGAAAATCATTCA+AGG | - | chr8_3:9890747-9890766 | None:intergenic | 20.0% |
| !! | CACATCAAACATAAATAATT+TGG | + | chr8_3:9891334-9891353 | Msa1275740:CDS | 20.0% |
| !!! | ATAAAGAAAATATGTTTTGG+TGG | + | chr8_3:9891567-9891586 | Msa1275740:three_prime_UTR | 20.0% |
| !! | AAGAAAACAAATGATAGTAA+AGG | - | chr8_3:9891666-9891685 | None:intergenic | 20.0% |
| !! | TTCAATTCCGATTTTCAATT+AGG | + | chr8_3:9887096-9887115 | Msa1275740:five_prime_UTR | 25.0% |
| !! | TCAATTCCGATTTTCAATTA+GGG | + | chr8_3:9887097-9887116 | Msa1275740:five_prime_UTR | 25.0% |
| !! | GATTTTCAATTAGGGTTTAA+TGG | + | chr8_3:9887105-9887124 | Msa1275740:exon | 25.0% |
| ! | ATCACAAAAATGCAAGAAAT+TGG | - | chr8_3:9887216-9887235 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGTTTTTGTTGC+AGG | + | chr8_3:9887264-9887283 | Msa1275740:intron | 25.0% |
| ! | TTCTTCATTTGTCTGAATAT+TGG | - | chr8_3:9887292-9887311 | None:intergenic | 25.0% |
| ! | TTATTGAAGTTTGATGAGAA+GGG | + | chr8_3:9887422-9887441 | Msa1275740:intron | 25.0% |
| !! | TTTGAAACAAAGAGTTGTAT+AGG | + | chr8_3:9887499-9887518 | Msa1275740:intron | 25.0% |
| ! | TATGGGATATTGAATTTCAT+TGG | + | chr8_3:9887525-9887544 | Msa1275740:intron | 25.0% |
| ! | TCAGTTAAGTTAATGATTAC+TGG | + | chr8_3:9887678-9887697 | Msa1275740:intron | 25.0% |
| ! | TATAACTTCAAATACCAAAC+CGG | - | chr8_3:9887743-9887762 | None:intergenic | 25.0% |
| ! | ATACACAAATTCACTAAGTT+GGG | - | chr8_3:9888071-9888090 | None:intergenic | 25.0% |
| ! | AATACACAAATTCACTAAGT+TGG | - | chr8_3:9888072-9888091 | None:intergenic | 25.0% |
| !! | CTTAGTGAATTTGTGTATTT+TGG | + | chr8_3:9888073-9888092 | Msa1275740:intron | 25.0% |
| !!! | TTGGCTTAAATGTTTTTTGT+TGG | + | chr8_3:9888131-9888150 | Msa1275740:intron | 25.0% |
| !!! | TGGCTTAAATGTTTTTTGTT+GGG | + | chr8_3:9888132-9888151 | Msa1275740:intron | 25.0% |
| ! | TTGAGACATTATAAGAAAAC+TGG | - | chr8_3:9888365-9888384 | None:intergenic | 25.0% |
| !!! | ATACCAAGTCATTTTTACAT+CGG | + | chr8_3:9888424-9888443 | Msa1275740:CDS | 25.0% |
| !! | TTTTCTGATTTTATTCAGCA+TGG | + | chr8_3:9888685-9888704 | Msa1275740:intron | 25.0% |
| !! | CAAAATAAGAAAGCATGATA+GGG | - | chr8_3:9888751-9888770 | None:intergenic | 25.0% |
| !! | ACAAAATAAGAAAGCATGAT+AGG | - | chr8_3:9888752-9888771 | None:intergenic | 25.0% |
| ! | AATTTGGACATCCATATAAT+AGG | + | chr8_3:9889192-9889211 | Msa1275740:intron | 25.0% |
| ! | CCAATGAAACCAAATTTAAT+TGG | - | chr8_3:9889404-9889423 | None:intergenic | 25.0% |
| !! | CCAATTAAATTTGGTTTCAT+TGG | + | chr8_3:9889401-9889420 | Msa1275740:intron | 25.0% |
| ! | AATCAATGGCTATTAAGAAA+GGG | - | chr8_3:9889687-9889706 | None:intergenic | 25.0% |
| ! | AAATCAATGGCTATTAAGAA+AGG | - | chr8_3:9889688-9889707 | None:intergenic | 25.0% |
| !!! | CATTTTCAGGTAAAAATCAA+TGG | - | chr8_3:9889701-9889720 | None:intergenic | 25.0% |
| ! | ATTGGATACTCTTTCTTATT+TGG | + | chr8_3:9889852-9889871 | Msa1275740:intron | 25.0% |
| ! | AAAGAGAAGTTAAAACAACA+AGG | - | chr8_3:9890627-9890646 | None:intergenic | 25.0% |
| ! | TCCAACATCATATATGATTA+AGG | + | chr8_3:9891072-9891091 | Msa1275740:intron | 25.0% |
| ! | TCCTTAATCATATATGATGT+TGG | - | chr8_3:9891076-9891095 | None:intergenic | 25.0% |
| ! | TAAACCTTTCAGAATTTACA+AGG | - | chr8_3:9891447-9891466 | None:intergenic | 25.0% |
| ! | AGGTTACGAAAAATATTCAT+CGG | - | chr8_3:9891646-9891665 | None:intergenic | 25.0% |
| ! | CATATCATTGTGAACTATAT+CGG | + | chr8_3:9891717-9891736 | Msa1275740:three_prime_UTR | 25.0% |
| ! | ATATCATTGTGAACTATATC+GGG | + | chr8_3:9891718-9891737 | Msa1275740:three_prime_UTR | 25.0% |
| ! | ACAACAAATTACAAACACAA+CGG | - | chr8_3:9891984-9892003 | None:intergenic | 25.0% |
| !!! | GTGTTTGTAATTTGTTGTAA+TGG | + | chr8_3:9891986-9892005 | Msa1275740:three_prime_UTR | 25.0% |
| ! | TAACACATGCATACAATTAA+TGG | - | chr8_3:9892065-9892084 | None:intergenic | 25.0% |
| !! | ATTTTTCATTTTCTTAACGG+TGG | - | chr8_3:9892092-9892111 | None:intergenic | 25.0% |
| AAATTCCAAAAAACAGCGTT+AGG | + | chr8_3:9886895-9886914 | Msa1275740:five_prime_UTR | 30.0% | |
| GAAAAAGGAAAGGACAAAAT+AGG | - | chr8_3:9887011-9887030 | None:intergenic | 30.0% | |
| ! | AAGAAGAAAAGGGTATATCT+GGG | - | chr8_3:9887041-9887060 | None:intergenic | 30.0% |
| !! | TCTTTTGGAGAGATCTATTT+AGG | + | chr8_3:9887178-9887197 | Msa1275740:CDS | 30.0% |
| GTTATTGAAGTTTGATGAGA+AGG | + | chr8_3:9887421-9887440 | Msa1275740:intron | 30.0% | |
| TATTGAAGTTTGATGAGAAG+GGG | + | chr8_3:9887423-9887442 | Msa1275740:intron | 30.0% | |
| AAAGAGTTGTATAGGCAATA+TGG | + | chr8_3:9887507-9887526 | Msa1275740:intron | 30.0% | |
| AAGAGTTGTATAGGCAATAT+GGG | + | chr8_3:9887508-9887527 | Msa1275740:intron | 30.0% | |
| TAATCGATACTTCGATTACA+AGG | - | chr8_3:9887593-9887612 | None:intergenic | 30.0% | |
| AGGTAATTAGATGATTGATC+AGG | + | chr8_3:9887620-9887639 | Msa1275740:intron | 30.0% | |
| TGATTAACCAAGTCTGATTA+TGG | - | chr8_3:9887661-9887680 | None:intergenic | 30.0% | |
| TTGCTTCATACAACAATTGA+GGG | - | chr8_3:9888014-9888033 | None:intergenic | 30.0% | |
| TTTGCTTCATACAACAATTG+AGG | - | chr8_3:9888015-9888034 | None:intergenic | 30.0% | |
| AAGCTGTATAAAATACTGCA+AGG | + | chr8_3:9888033-9888052 | Msa1275740:CDS | 30.0% | |
| TAGACTTCATATTACTCACT+TGG | + | chr8_3:9888112-9888131 | Msa1275740:intron | 30.0% | |
| ! | TTTGTTGGGTTTCTTTTCTT+TGG | + | chr8_3:9888146-9888165 | Msa1275740:intron | 30.0% |
| TGAATAAATCCTCAAGACTA+GGG | - | chr8_3:9888245-9888264 | None:intergenic | 30.0% | |
| TTGAATAAATCCTCAAGACT+AGG | - | chr8_3:9888246-9888265 | None:intergenic | 30.0% | |
| TTACAAGCTTATGCAATACA+GGG | - | chr8_3:9888332-9888351 | None:intergenic | 30.0% | |
| ATTACAAGCTTATGCAATAC+AGG | - | chr8_3:9888333-9888352 | None:intergenic | 30.0% | |
| !!! | TACCAAGTCATTTTTACATC+GGG | + | chr8_3:9888425-9888444 | Msa1275740:CDS | 30.0% |
| TTCATATTTGCCTCTTATGT+AGG | + | chr8_3:9888574-9888593 | Msa1275740:intron | 30.0% | |
| ! | ATTCCCTATAGGTACTTTTA+TGG | + | chr8_3:9888653-9888672 | Msa1275740:intron | 30.0% |
| !! | ATGCCATAAAAGTACCTATA+GGG | - | chr8_3:9888659-9888678 | None:intergenic | 30.0% |
| ATGATAGGGAATATATCGAT+GGG | - | chr8_3:9888737-9888756 | None:intergenic | 30.0% | |
| ATCATGGAAAATCCTATATC+TGG | + | chr8_3:9888782-9888801 | Msa1275740:intron | 30.0% | |
| ! | AAAATCCTATATCTGGAATC+TGG | + | chr8_3:9888789-9888808 | Msa1275740:intron | 30.0% |
| GCTGATTACTACTATTTAGT+AGG | + | chr8_3:9888845-9888864 | Msa1275740:intron | 30.0% | |
| GATTACTACTATTTAGTAGG+AGG | + | chr8_3:9888848-9888867 | Msa1275740:intron | 30.0% | |
| AAGAAAATAGAATCAATGCC+AGG | - | chr8_3:9888973-9888992 | None:intergenic | 30.0% | |
| AATGGATCTTAGTTCAAACA+AGG | - | chr8_3:9889083-9889102 | None:intergenic | 30.0% | |
| ATAACTTATGTTGCTGTAAG+TGG | + | chr8_3:9889509-9889528 | Msa1275740:intron | 30.0% | |
| ATGAATACTCATCTTGGAAT+TGG | + | chr8_3:9889632-9889651 | Msa1275740:CDS | 30.0% | |
| ! | AGCAAAAAACTCACATTTTC+AGG | - | chr8_3:9889714-9889733 | None:intergenic | 30.0% |
| GAAAGTTTCTACATCTATTG+AGG | + | chr8_3:9889949-9889968 | Msa1275740:CDS | 30.0% | |
| TACATCTATTGAGGTATGAT+TGG | + | chr8_3:9889958-9889977 | Msa1275740:intron | 30.0% | |
| AAGTATGAAGCAAATTCTGA+GGG | - | chr8_3:9890089-9890108 | None:intergenic | 30.0% | |
| CTTCATACTTCCATTATTGT+CGG | + | chr8_3:9890099-9890118 | Msa1275740:CDS | 30.0% | |
| ! | CTTTTCAGATAAGCATAATC+TGG | - | chr8_3:9890146-9890165 | None:intergenic | 30.0% |
| ! | AACCTAAACTATGGTTTTCA+AGG | - | chr8_3:9890252-9890271 | None:intergenic | 30.0% |
| !! | TCATAGTTTAGGTTCTAGAT+GGG | + | chr8_3:9890308-9890327 | Msa1275740:intron | 30.0% |
| AATCGAAGACATAATCAAAC+TGG | - | chr8_3:9890385-9890404 | None:intergenic | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | + | chr8_3:9890384-9890403 | Msa1275740:CDS | 30.0% | |
| !!! | TACCAGTGCATTTTTTAATG+TGG | + | chr8_3:9890765-9890784 | Msa1275740:intron | 30.0% |
| GAAAAGATGGTAGGAATATT+GGG | + | chr8_3:9890807-9890826 | Msa1275740:CDS | 30.0% | |
| AAGATTCCATCATTAGCAAT+AGG | - | chr8_3:9890872-9890891 | None:intergenic | 30.0% | |
| ! | TATGGTGCGTGTTTTATATA+TGG | + | chr8_3:9890943-9890962 | Msa1275740:intron | 30.0% |
| ! | ATGGTGCGTGTTTTATATAT+GGG | + | chr8_3:9890944-9890963 | Msa1275740:intron | 30.0% |
| TATCGAGTTCGAATTTCTTT+CGG | + | chr8_3:9891123-9891142 | Msa1275740:CDS | 30.0% | |
| AAGTTCACATATCATGTCAT+CGG | + | chr8_3:9891283-9891302 | Msa1275740:CDS | 30.0% | |
| TCAGAATTTACAAGGAAGAA+AGG | - | chr8_3:9891439-9891458 | None:intergenic | 30.0% | |
| TCTTCCTTGTAAATTCTGAA+AGG | + | chr8_3:9891440-9891459 | Msa1275740:three_prime_UTR | 30.0% | |
| ! | ATACTCATTTTCACAAAGTG+CGG | + | chr8_3:9891466-9891485 | Msa1275740:three_prime_UTR | 30.0% |
| !!! | TCTTTGATATTTTTAGCCTC+AGG | + | chr8_3:9891682-9891701 | Msa1275740:three_prime_UTR | 30.0% |
| !!! | CTTTGATATTTTTAGCCTCA+GGG | + | chr8_3:9891683-9891702 | Msa1275740:three_prime_UTR | 30.0% |
| TATCATTGTGAACTATATCG+GGG | + | chr8_3:9891719-9891738 | Msa1275740:three_prime_UTR | 30.0% | |
| GACAAAATATCTTGTGTAAG+TGG | + | chr8_3:9892037-9892056 | Msa1275740:three_prime_UTR | 30.0% | |
| TATCTGGGAAATGCTGAAAA+AGG | - | chr8_3:9887026-9887045 | None:intergenic | 35.0% | |
| ! | GAAGAAGAAAAGGGTATATC+TGG | - | chr8_3:9887042-9887061 | None:intergenic | 35.0% |
| GTCATCGTAGAAGAAGAAAA+GGG | - | chr8_3:9887051-9887070 | None:intergenic | 35.0% | |
| ATTGGAAATAAGTTCCGTCT+TGG | + | chr8_3:9887136-9887155 | Msa1275740:CDS | 35.0% | |
| TTGGAAATAAGTTCCGTCTT+GGG | + | chr8_3:9887137-9887156 | Msa1275740:CDS | 35.0% | |
| ! | TACCAATTTTTCTCCCAAGA+CGG | - | chr8_3:9887153-9887172 | None:intergenic | 35.0% |
| !!! | AAAATTGGTAGCGGATCTTT+TGG | + | chr8_3:9887163-9887182 | Msa1275740:CDS | 35.0% |
| GTAATCACCATAATCAGACT+TGG | + | chr8_3:9887651-9887670 | Msa1275740:intron | 35.0% | |
| ! | GATTAGGTGATGTTGATTAC+CGG | + | chr8_3:9887721-9887740 | Msa1275740:intron | 35.0% |
| CTGTATAAAATACTGCAAGG+AGG | + | chr8_3:9888036-9888055 | Msa1275740:CDS | 35.0% | |
| !! | ATCCTTGTGATGGATTTACT+TGG | + | chr8_3:9888219-9888238 | Msa1275740:CDS | 35.0% |
| ACAATTTCCTCATGGGTTTA+GGG | + | chr8_3:9888460-9888479 | Msa1275740:CDS | 35.0% | |
| AACTGATACATAACAAGCGT+TGG | - | chr8_3:9888555-9888574 | None:intergenic | 35.0% | |
| ATGATGTACACCTACATAAG+AGG | - | chr8_3:9888587-9888606 | None:intergenic | 35.0% | |
| !! | TAGGTGTACATCATTGACTT+TGG | + | chr8_3:9888593-9888612 | Msa1275740:intron | 35.0% |
| !! | GATGCCATAAAAGTACCTAT+AGG | - | chr8_3:9888660-9888679 | None:intergenic | 35.0% |
| TGATAGGGAATATATCGATG+GGG | - | chr8_3:9888736-9888755 | None:intergenic | 35.0% | |
| CATGATAGGGAATATATCGA+TGG | - | chr8_3:9888738-9888757 | None:intergenic | 35.0% | |
| AACATCCAGATTCCAGATAT+AGG | - | chr8_3:9888797-9888816 | None:intergenic | 35.0% | |
| ! | AACTAATTTTGAGCTTTGCG+CGG | + | chr8_3:9888925-9888944 | Msa1275740:intron | 35.0% |
| GGCTAACAAAACTATCATCA+AGG | - | chr8_3:9889062-9889081 | None:intergenic | 35.0% | |
| GTTTGTAAGTATGGCATCAA+TGG | - | chr8_3:9889101-9889120 | None:intergenic | 35.0% | |
| GATTCTTATTCTCTCTGCAA+GGG | - | chr8_3:9889586-9889605 | None:intergenic | 35.0% | |
| AGATTCTTATTCTCTCTGCA+AGG | - | chr8_3:9889587-9889606 | None:intergenic | 35.0% | |
| CAGAGAGAATAAGAATCTGA+CGG | + | chr8_3:9889589-9889608 | Msa1275740:intron | 35.0% | |
| AGAGAGAATAAGAATCTGAC+GGG | + | chr8_3:9889590-9889609 | Msa1275740:intron | 35.0% | |
| GCTAGTATGAATACTCATCT+TGG | + | chr8_3:9889626-9889645 | Msa1275740:CDS | 35.0% | |
| TTTAATAGAGCAAAGCCGTA+GGG | + | chr8_3:9889733-9889752 | Msa1275740:intron | 35.0% | |
| GAAGTATGAAGCAAATTCTG+AGG | - | chr8_3:9890090-9890109 | None:intergenic | 35.0% | |
| GTCCTTGAAAACCATAGTTT+AGG | + | chr8_3:9890247-9890266 | Msa1275740:intron | 35.0% | |
| !! | ACCATAGTTTAGGTTCTAGA+TGG | + | chr8_3:9890257-9890276 | Msa1275740:intron | 35.0% |
| !! | CCATAGTTTAGGTTCTAGAT+GGG | + | chr8_3:9890258-9890277 | Msa1275740:intron | 35.0% |
| !! | GTCATAGTTTAGGTTCTAGA+TGG | + | chr8_3:9890307-9890326 | Msa1275740:intron | 35.0% |
| ACATAATCAAACTGGAATCC+TGG | - | chr8_3:9890377-9890396 | None:intergenic | 35.0% | |
| CACCACATTAAAAAATGCAC+TGG | - | chr8_3:9890770-9890789 | None:intergenic | 35.0% | |
| GGAAAAGATGGTAGGAATAT+TGG | + | chr8_3:9890806-9890825 | Msa1275740:CDS | 35.0% | |
| GGTTAAGTCATTTGTAAGTG+GGG | - | chr8_3:9890909-9890928 | None:intergenic | 35.0% | |
| CGGTTAAGTCATTTGTAAGT+GGG | - | chr8_3:9890910-9890929 | None:intergenic | 35.0% | |
| CCACTTACAAATGACTTAAC+CGG | + | chr8_3:9890908-9890927 | Msa1275740:CDS | 35.0% | |
| TGTTTCTTCCAGATGATACT+CGG | - | chr8_3:9891316-9891335 | None:intergenic | 35.0% | |
| AATTTGGATTCAACGCTTAG+AGG | + | chr8_3:9891350-9891369 | Msa1275740:CDS | 35.0% | |
| TCTGCATTTAAACGATGAGA+GGG | + | chr8_3:9891382-9891401 | Msa1275740:CDS | 35.0% | |
| AGAAAAAGCTGCAAGCAAAT+TGG | + | chr8_3:9891522-9891541 | Msa1275740:three_prime_UTR | 35.0% | |
| GAAAAAGCTGCAAGCAAATT+GGG | + | chr8_3:9891523-9891542 | Msa1275740:three_prime_UTR | 35.0% | |
| !!! | TTTACGAGGCTAGTTTTGTT+AGG | - | chr8_3:9891596-9891615 | None:intergenic | 35.0% |
| ! | AACAAAACTAGCCTCGTAAA+AGG | + | chr8_3:9891596-9891615 | Msa1275740:three_prime_UTR | 35.0% |
| TATGCTTTATATCATCCCTG+AGG | - | chr8_3:9891701-9891720 | None:intergenic | 35.0% | |
| ATCATTGTGAACTATATCGG+GGG | + | chr8_3:9891720-9891739 | Msa1275740:three_prime_UTR | 35.0% | |
| ACAATTACAGTAGAGAAACG+CGG | - | chr8_3:9891838-9891857 | None:intergenic | 35.0% | |
| CACATGTAAAGCTTGATCTT+TGG | - | chr8_3:9891880-9891899 | None:intergenic | 35.0% | |
| TCAAGCTTTACATGTGAGAT+TGG | + | chr8_3:9891884-9891903 | Msa1275740:three_prime_UTR | 35.0% | |
| CTTTACATGTGAGATTGGAA+TGG | + | chr8_3:9891889-9891908 | Msa1275740:three_prime_UTR | 35.0% | |
| TTCCAAAAAACAGCGTTAGG+AGG | + | chr8_3:9886898-9886917 | Msa1275740:five_prime_UTR | 40.0% | |
| !!! | TACCTCCTAACGCTGTTTTT+TGG | - | chr8_3:9886903-9886922 | None:intergenic | 40.0% |
| GGGAAATGCTGAAAAAGGAA+AGG | - | chr8_3:9887021-9887040 | None:intergenic | 40.0% | |
| CGTCATCGTAGAAGAAGAAA+AGG | - | chr8_3:9887052-9887071 | None:intergenic | 40.0% | |
| GGTTTAATGGAACCTCGAAT+TGG | + | chr8_3:9887118-9887137 | Msa1275740:exon | 40.0% | |
| CGGAACTTATTTCCAATTCG+AGG | - | chr8_3:9887133-9887152 | None:intergenic | 40.0% | |
| TTCCGTCTTGGGAGAAAAAT+TGG | + | chr8_3:9887148-9887167 | Msa1275740:CDS | 40.0% | |
| CTTGGGAGAAAAATTGGTAG+CGG | + | chr8_3:9887154-9887173 | Msa1275740:CDS | 40.0% | |
| !! | GAAGTATCGATTACAGACGT+AGG | + | chr8_3:9887600-9887619 | Msa1275740:intron | 40.0% |
| ! | GATGATTGATCAGGTTAGTC+AGG | + | chr8_3:9887629-9887648 | Msa1275740:intron | 40.0% |
| !! | ATACAACAATTGAGGGTGCT+TGG | - | chr8_3:9888007-9888026 | None:intergenic | 40.0% |
| !! | GGTTTCTTTTCTTTGGAAGC+TGG | + | chr8_3:9888153-9888172 | Msa1275740:intron | 40.0% |
| CTGGAATACCGAATGTGAAA+TGG | + | chr8_3:9888172-9888191 | Msa1275740:CDS | 40.0% | |
| ATACCGAATGTGAAATGGTC+CGG | + | chr8_3:9888177-9888196 | Msa1275740:CDS | 40.0% | |
| AGAGTACAACATCCTTGTGA+TGG | + | chr8_3:9888209-9888228 | Msa1275740:CDS | 40.0% | |
| TTGATCGGCAAGCATAAGAA+CGG | - | chr8_3:9888298-9888317 | None:intergenic | 40.0% | |
| TCTTATGCTTGCCGATCAAA+TGG | + | chr8_3:9888299-9888318 | Msa1275740:CDS | 40.0% | |
| GTCCCGATGTAAAAATGACT+TGG | - | chr8_3:9888430-9888449 | None:intergenic | 40.0% | |
| AAAGCCAGACAATTTCCTCA+TGG | + | chr8_3:9888452-9888471 | Msa1275740:CDS | 40.0% | |
| AAGCCAGACAATTTCCTCAT+GGG | + | chr8_3:9888453-9888472 | Msa1275740:CDS | 40.0% | |
| AAACCCATGAGGAAATTGTC+TGG | - | chr8_3:9888459-9888478 | None:intergenic | 40.0% | |
| GACAATTTCCTCATGGGTTT+AGG | + | chr8_3:9888459-9888478 | Msa1275740:CDS | 40.0% | |
| CACATCAGCATATTCCCTAT+AGG | + | chr8_3:9888642-9888661 | Msa1275740:CDS | 40.0% | |
| ! | ACTAATTTTGAGCTTTGCGC+GGG | + | chr8_3:9888926-9888945 | Msa1275740:intron | 40.0% |
| ACTGGTGTAACAATCATGCA+AGG | - | chr8_3:9889024-9889043 | None:intergenic | 40.0% | |
| AGGCAAATAGCTTAACGAAC+TGG | - | chr8_3:9889042-9889061 | None:intergenic | 40.0% | |
| TATGTTGCTGTAAGTGGTCA+AGG | + | chr8_3:9889515-9889534 | Msa1275740:intron | 40.0% | |
| CTTTAATAGAGCAAAGCCGT+AGG | + | chr8_3:9889732-9889751 | Msa1275740:intron | 40.0% | |
| CTATTCATCCGTGAAGGTTT+GGG | + | chr8_3:9890179-9890198 | Msa1275740:intron | 40.0% | |
| ! | CCCATCTAGAACCTAAACTA+TGG | - | chr8_3:9890261-9890280 | None:intergenic | 40.0% |
| ACCATCACTTACAATACCAC+GGG | - | chr8_3:9890453-9890472 | None:intergenic | 40.0% | |
| CACCATCACTTACAATACCA+CGG | - | chr8_3:9890454-9890473 | None:intergenic | 40.0% | |
| AGTGACAATGTGACACTTAC+AGG | + | chr8_3:9890534-9890553 | Msa1275740:intron | 40.0% | |
| GTGACAATGTGACACTTACA+GGG | + | chr8_3:9890535-9890554 | Msa1275740:intron | 40.0% | |
| GGATGAGTCAGATGACAAAA+AGG | - | chr8_3:9890726-9890745 | None:intergenic | 40.0% | |
| AAGATGGTAGGAATATTGGG+TGG | + | chr8_3:9890810-9890829 | Msa1275740:CDS | 40.0% | |
| ATCATTAGCAATAGGTCCAG+AGG | - | chr8_3:9890864-9890883 | None:intergenic | 40.0% | |
| TCTGGACCTATTGCTAATGA+TGG | + | chr8_3:9890863-9890882 | Msa1275740:CDS | 40.0% | |
| CCGGTTAAGTCATTTGTAAG+TGG | - | chr8_3:9890911-9890930 | None:intergenic | 40.0% | |
| AACCGGATCTAAAGATGCTA+TGG | + | chr8_3:9890925-9890944 | Msa1275740:CDS | 40.0% | |
| CACCATAGCATCTTTAGATC+CGG | - | chr8_3:9890930-9890949 | None:intergenic | 40.0% | |
| CTTGCAGAAGTCAAAGATGA+TGG | + | chr8_3:9890997-9891016 | Msa1275740:intron | 40.0% | |
| TCGAATTTCTTTCGGTCAAG+TGG | + | chr8_3:9891131-9891150 | Msa1275740:CDS | 40.0% | |
| GTCTGCATTTAAACGATGAG+AGG | + | chr8_3:9891381-9891400 | Msa1275740:CDS | 40.0% | |
| ! | ATGAACAGAAGCCTTTTACG+AGG | - | chr8_3:9891610-9891629 | None:intergenic | 40.0% |
| GCGTTTCTCTACTGTAATTG+TGG | + | chr8_3:9891837-9891856 | Msa1275740:three_prime_UTR | 40.0% | |
| ! | GGTGATGTTGATTACCGGTT+TGG | + | chr8_3:9887726-9887745 | Msa1275740:intron | 45.0% |
| ACACCGGACCATTTCACATT+CGG | - | chr8_3:9888183-9888202 | None:intergenic | 45.0% | |
| GGCCAAGTAAATCCATCACA+AGG | - | chr8_3:9888224-9888243 | None:intergenic | 45.0% | |
| !! | TTTACTTGGCCCTAGTCTTG+AGG | + | chr8_3:9888233-9888252 | Msa1275740:CDS | 45.0% |
| TATGCTTGCCGATCAAATGG+TGG | + | chr8_3:9888302-9888321 | Msa1275740:intron | 45.0% | |
| ATGCTTGCCGATCAAATGGT+GGG | + | chr8_3:9888303-9888322 | Msa1275740:intron | 45.0% | |
| AGGGAAACCCACCATTTGAT+CGG | - | chr8_3:9888313-9888332 | None:intergenic | 45.0% | |
| ATTTCCTCATGGGTTTAGGG+AGG | + | chr8_3:9888463-9888482 | Msa1275740:CDS | 45.0% | |
| ! | CTAATTTTGAGCTTTGCGCG+GGG | + | chr8_3:9888927-9888946 | Msa1275740:intron | 45.0% |
| !!! | CTTTCCTGGTTTTGCATTCC+TGG | + | chr8_3:9888952-9888971 | Msa1275740:intron | 45.0% |
| AATGCCAGGAATGCAAAACC+AGG | - | chr8_3:9888959-9888978 | None:intergenic | 45.0% | |
| TATTACACACCCCAGAGAGA+GGG | - | chr8_3:9889440-9889459 | None:intergenic | 45.0% | |
| ATATTACACACCCCAGAGAG+AGG | - | chr8_3:9889441-9889460 | None:intergenic | 45.0% | |
| GCGACTCTAAATCATCCCTA+CGG | - | chr8_3:9889751-9889770 | None:intergenic | 45.0% | |
| ! | AGGGATGATTTAGAGTCGCT+TGG | + | chr8_3:9889752-9889771 | Msa1275740:CDS | 45.0% |
| ! | GGTATTTCTGCAGTCTACCT+TGG | + | chr8_3:9889873-9889892 | Msa1275740:intron | 45.0% |
| ! | CAAATTCTGAGGGATAGCCA+CGG | - | chr8_3:9890079-9890098 | None:intergenic | 45.0% |
| TCCATTATTGTCGGTCACTG+AGG | + | chr8_3:9890108-9890127 | Msa1275740:CDS | 45.0% | |
| ACCTCAGTGACCGACAATAA+TGG | - | chr8_3:9890112-9890131 | None:intergenic | 45.0% | |
| CCAAACCTTCACGGATGAAT+AGG | - | chr8_3:9890181-9890200 | None:intergenic | 45.0% | |
| CCTATTCATCCGTGAAGGTT+TGG | + | chr8_3:9890178-9890197 | Msa1275740:intron | 45.0% | |
| AAACAAGGCCCAAACCTTCA+CGG | - | chr8_3:9890190-9890209 | None:intergenic | 45.0% | |
| TCACTTACAATACCACGGGA+AGG | - | chr8_3:9890449-9890468 | None:intergenic | 45.0% | |
| TCCCGTGGTATTGTAAGTGA+TGG | + | chr8_3:9890449-9890468 | Msa1275740:intron | 45.0% | |
| TGCTGTCTCATTACGTTAGC+TGG | + | chr8_3:9890474-9890493 | Msa1275740:intron | 45.0% | |
| TCAGCATTTGCAGAAGCTAG+CGG | - | chr8_3:9890589-9890608 | None:intergenic | 45.0% | |
| CTAGCTTCTGCAAATGCTGA+TGG | + | chr8_3:9890589-9890608 | Msa1275740:CDS | 45.0% | |
| TTAATGTGGTGCCTCTGTGT+AGG | + | chr8_3:9890779-9890798 | Msa1275740:intron | 45.0% | |
| !! | TGTGTAGGTGGTGGAAAAGA+TGG | + | chr8_3:9890794-9890813 | Msa1275740:intron | 45.0% |
| !! | TAGGTGGTGGAAAAGATGGT+AGG | + | chr8_3:9890798-9890817 | Msa1275740:intron | 45.0% |
| AAACTTGAATCCAGCGTGAG+AGG | - | chr8_3:9891230-9891249 | None:intergenic | 45.0% | |
| ! | CTCACGCTGGATTCAAGTTT+AGG | + | chr8_3:9891230-9891249 | Msa1275740:CDS | 45.0% |
| ! | TCTGAGCACCAGAGCTTTTA+CGG | - | chr8_3:9891262-9891281 | None:intergenic | 45.0% |
| ! | CATTTTCACAAAGTGCGGAG+TGG | + | chr8_3:9891471-9891490 | Msa1275740:three_prime_UTR | 45.0% |
| TTACAGTAGAGAAACGCGGT+GGG | - | chr8_3:9891834-9891853 | None:intergenic | 45.0% | |
| ATTACAGTAGAGAAACGCGG+TGG | - | chr8_3:9891835-9891854 | None:intergenic | 45.0% | |
| GATTGGAATGGAGCGAGTAA+CGG | + | chr8_3:9891901-9891920 | Msa1275740:three_prime_UTR | 45.0% | |
| ATTGGAATGGAGCGAGTAAC+GGG | + | chr8_3:9891902-9891921 | Msa1275740:three_prime_UTR | 45.0% | |
| !! | ATTTGATTATTAATTAATTA+AGG | - | chr8_3:9886879-9886898 | None:intergenic | 5.0% |
| !!! | TATAATTTTTTTAGATAATT+TGG | + | chr8_3:9889176-9889195 | Msa1275740:intron | 5.0% |
| GAATGTGAAATGGTCCGGTG+TGG | + | chr8_3:9888182-9888201 | Msa1275740:CDS | 50.0% | |
| GTTGTACTCTCCTTCCACAC+CGG | - | chr8_3:9888199-9888218 | None:intergenic | 50.0% | |
| TTTCTGCAGTCTACCTTGGC+AGG | + | chr8_3:9889877-9889896 | Msa1275740:intron | 50.0% | |
| TTCTGCAGTCTACCTTGGCA+GGG | + | chr8_3:9889878-9889897 | Msa1275740:intron | 50.0% | |
| CGTGACCTATTCATCCGTGA+AGG | + | chr8_3:9890173-9890192 | Msa1275740:CDS | 50.0% | |
| ! | TGTTCTTGCCTTGTTGCTCC+AGG | + | chr8_3:9890356-9890375 | Msa1275740:intron | 50.0% |
| ACTGGAATCCTGGAGCAACA+AGG | - | chr8_3:9890367-9890386 | None:intergenic | 50.0% | |
| CTTACAATACCACGGGAAGG+AGG | - | chr8_3:9890446-9890465 | None:intergenic | 50.0% | |
| ! | GCAAATGCTGATGGACAGTC+AGG | + | chr8_3:9890598-9890617 | Msa1275740:CDS | 50.0% |
| ! | CTTTTCCACCACCTACACAG+AGG | - | chr8_3:9890793-9890812 | None:intergenic | 50.0% |
| TTCGGTCAAGTGGATCTGCA+AGG | + | chr8_3:9891141-9891160 | Msa1275740:CDS | 50.0% | |
| GAGCACAACCGAGTATCATC+TGG | + | chr8_3:9891305-9891324 | Msa1275740:CDS | 50.0% | |
| TTGGAATGGAGCGAGTAACG+GGG | + | chr8_3:9891903-9891922 | Msa1275740:three_prime_UTR | 50.0% | |
| GTGAAATGGTCCGGTGTGGA+AGG | + | chr8_3:9888186-9888205 | Msa1275740:CDS | 55.0% | |
| CCTGCTTTCAATCCCTGCCA+AGG | - | chr8_3:9889893-9889912 | None:intergenic | 55.0% | |
| CCTTGGCAGGGATTGAAAGC+AGG | + | chr8_3:9889890-9889909 | Msa1275740:CDS | 55.0% | |
| ! | CTTTGCTAGTCTCTCTGCCG+TGG | + | chr8_3:9890059-9890078 | Msa1275740:intron | 55.0% |
| AATACCACGGGAAGGAGGAG+TGG | - | chr8_3:9890441-9890460 | None:intergenic | 55.0% | |
| CACTTACAGGGTCTTGCTGC+TGG | + | chr8_3:9890547-9890566 | Msa1275740:intron | 55.0% | |
| ATGTGGTGCCTCTGTGTAGG+TGG | + | chr8_3:9890782-9890801 | Msa1275740:intron | 55.0% | |
| CTTCGTCTGATCCCACTCGA+AGG | + | chr8_3:9890834-9890853 | Msa1275740:CDS | 55.0% | |
| CCAGAGGTTCTCCTTCGAGT+GGG | - | chr8_3:9890848-9890867 | None:intergenic | 55.0% | |
| TCCAGAGGTTCTCCTTCGAG+TGG | - | chr8_3:9890849-9890868 | None:intergenic | 55.0% | |
| TCAAGTGGATCTGCAAGGCG+AGG | + | chr8_3:9891146-9891165 | Msa1275740:CDS | 55.0% | |
| CACTGCCAACAGCTGCATCA+CGG | - | chr8_3:9891187-9891206 | None:intergenic | 55.0% | |
| TGCAGCTGTTGGCAGTGAGA+CGG | + | chr8_3:9891190-9891209 | Msa1275740:CDS | 55.0% | |
| GGAGCAGTCCGTAAAAGCTC+TGG | + | chr8_3:9891251-9891270 | Msa1275740:CDS | 55.0% | |
| TCACAAAGTGCGGAGTGGAG+TGG | + | chr8_3:9891476-9891495 | Msa1275740:three_prime_UTR | 55.0% | |
| CACGCCTCCCTAAACCCATG+AGG | - | chr8_3:9888470-9888489 | None:intergenic | 60.0% | |
| CTTTGCGCGGGGAACTTTCC+TGG | + | chr8_3:9888938-9888957 | Msa1275740:intron | 60.0% | |
| CCAGAGAGAGGGAGAGAGTC+GGG | - | chr8_3:9889429-9889448 | None:intergenic | 60.0% | |
| CCCAGAGAGAGGGAGAGAGT+CGG | - | chr8_3:9889430-9889449 | None:intergenic | 60.0% | |
| CCGACTCTCTCCCTCTCTCT+GGG | + | chr8_3:9889427-9889446 | Msa1275740:intron | 60.0% | |
| CGACTCTCTCCCTCTCTCTG+GGG | + | chr8_3:9889428-9889447 | Msa1275740:intron | 60.0% | |
| CTTGCTGCTGGACCGAGTTC+TGG | + | chr8_3:9890559-9890578 | Msa1275740:CDS | 60.0% | |
| GCTAGCGGCAGACCAGAACT+CGG | - | chr8_3:9890574-9890593 | None:intergenic | 60.0% | |
| TGGTGCCTCTGTGTAGGTGG+TGG | + | chr8_3:9890785-9890804 | Msa1275740:intron | 60.0% | |
| CCCACTCGAAGGAGAACCTC+TGG | + | chr8_3:9890845-9890864 | Msa1275740:CDS | 60.0% | |
| AGCAGCCGTGATGCAGCTGT+TGG | + | chr8_3:9891179-9891198 | Msa1275740:CDS | 60.0% | |
| AGCGTGAGAGGACGAGAGGA+GGG | - | chr8_3:9891218-9891237 | None:intergenic | 60.0% | |
| ATCCAGCGTGAGAGGACGAG+AGG | - | chr8_3:9891222-9891241 | None:intergenic | 60.0% | |
| CCCGACTCTCTCCCTCTCTC+TGG | + | chr8_3:9889426-9889445 | Msa1275740:intron | 65.0% | |
| ATCGCCACTCCTCCTTCCCG+TGG | + | chr8_3:9890434-9890453 | Msa1275740:CDS | 65.0% | |
| CAGCGTGAGAGGACGAGAGG+AGG | - | chr8_3:9891219-9891238 | None:intergenic | 65.0% | |
| CTCCTCTCGTCCTCTCACGC+TGG | + | chr8_3:9891217-9891236 | Msa1275740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 9886838 | 9892153 | 9886838 | ID=Msa1275740;Name=Msa1275740 |
| chr8_3 | mRNA | 9886838 | 9892153 | 9886838 | ID=Msa1275740-mRNA-1;Parent=Msa1275740;Name=Msa1275740-mRNA-1;_AED=0.13;_eAED=0.13;_QI=286|1|1|1|1|1|14|738|474 |
| chr8_3 | exon | 9886838 | 9887199 | 9886838 | ID=Msa1275740-mRNA-1:exon:4107;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9887286 | 9887326 | 9887286 | ID=Msa1275740-mRNA-1:exon:4108;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9887991 | 9888060 | 9887991 | ID=Msa1275740-mRNA-1:exon:4109;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9888172 | 9888320 | 9888172 | ID=Msa1275740-mRNA-1:exon:4110;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9888402 | 9888497 | 9888402 | ID=Msa1275740-mRNA-1:exon:4111;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9888596 | 9888663 | 9888596 | ID=Msa1275740-mRNA-1:exon:4112;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9889592 | 9889653 | 9889592 | ID=Msa1275740-mRNA-1:exon:4113;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9889741 | 9889804 | 9889741 | ID=Msa1275740-mRNA-1:exon:4114;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9889886 | 9889970 | 9889886 | ID=Msa1275740-mRNA-1:exon:4115;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9890068 | 9890194 | 9890068 | ID=Msa1275740-mRNA-1:exon:4116;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9890378 | 9890460 | 9890378 | ID=Msa1275740-mRNA-1:exon:4117;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9890556 | 9890619 | 9890556 | ID=Msa1275740-mRNA-1:exon:4118;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9890801 | 9890946 | 9890801 | ID=Msa1275740-mRNA-1:exon:4119;Parent=Msa1275740-mRNA-1 |
| chr8_3 | exon | 9891122 | 9892153 | 9891122 | ID=Msa1275740-mRNA-1:exon:4120;Parent=Msa1275740-mRNA-1 |
| chr8_3 | five_prime_UTR | 9886838 | 9887123 | 9886838 | ID=Msa1275740-mRNA-1:five_prime_utr;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9887124 | 9887199 | 9887124 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9887286 | 9887326 | 9887286 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9887991 | 9888060 | 9887991 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9888172 | 9888320 | 9888172 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9888402 | 9888497 | 9888402 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9888596 | 9888663 | 9888596 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9889592 | 9889653 | 9889592 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9889741 | 9889804 | 9889741 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9889886 | 9889970 | 9889886 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9890068 | 9890194 | 9890068 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9890378 | 9890460 | 9890378 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9890556 | 9890619 | 9890556 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9890801 | 9890946 | 9890801 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | CDS | 9891122 | 9891415 | 9891122 | ID=Msa1275740-mRNA-1:cds;Parent=Msa1275740-mRNA-1 |
| chr8_3 | three_prime_UTR | 9891416 | 9892153 | 9891416 | ID=Msa1275740-mRNA-1:three_prime_utr;Parent=Msa1275740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
